Merge pull request #198 from GavinHuttley/develop

Bug fix for another cds spans edge case
cogent3 · Feb 27, 2025 · 4398740 · 4398740
2 parents 74d8b7a + 153daa8
commit 4398740
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/src/ensembl_tui/_mysql_core_attr.py b/src/ensembl_tui/_mysql_core_attr.py
@@ -302,6 +302,7 @@ def get_transcript_attr_records(
         # so the start_exon coords become (exon_start + rel_start, exon_end)
         # the end_exon coords become (exon_start, exon_start + rel_stop)
         if lex.single_exon:
+            cds_spans = cds_spans[start_index : start_index + 1]
             cds_spans[0, :] = _adjust_single_exon(lex, cds_spans[0])
 
             yield TranscriptAttrRecord(