update concept image (#783)

* update concept image * dark mode image * update notebooks * fix lint docs --------- Co-authored-by: Arina Danilina <danilina@cip.ifi.lmu.de>
theislab · Jan 21, 2025 · d58b3f2 · d58b3f2
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diff --git a/docs/_static/img/dark_mode_concept_revised.png b/docs/_static/img/dark_mode_concept_revised.png
diff --git a/docs/_static/img/light_mode_concept_revised.png b/docs/_static/img/light_mode_concept_revised.png
diff --git a/docs/index.rst b/docs/index.rst
@@ -4,12 +4,12 @@ Moscot - Multiomics Single-cell Optimal Transport
 =================================================
 .. module:: moscot
 
-.. image:: _static/img/light_mode_concept.png
+.. image:: _static/img/light_mode_concept_revised.png
     :width: 800px
     :align: center
     :class: only-light
 
-.. image:: _static/img/dark_mode_concept.png
+.. image:: _static/img/dark_mode_concept_revised.png
     :width: 800px
     :align: center
     :class: only-dark

diff --git a/docs/notebooks b/docs/notebooks
+2 −2		.pre-commit-config.yaml
+2 −2		CONTRIBUTING.rst
+126 −10		examples/problems/200_custom_cost_matrices.ipynb
+13 −8		examples/problems/800_score_genes_for_marginals.ipynb
+747 −435		tutorials/200_temporal_problem.ipynb
+3 −3		tutorials/300_spatial_alignment.ipynb
+56 −43		tutorials/400_spatial_mapping.ipynb