Releases: prescient-design/lobster
Releases · prescient-design/lobster
v0.0.6
What's Changed
- Modern bert by @Sidney-Lisanza in #20
- mgm script setup by @ncfrey in #21
- add AminoAcidTokenizerFast by @kleinhenz in #16
- adding predict_fab that formats pdb file with heavy and light chain by @fdreyer in #17
- Add FlexBERT from ModernBERT by @edwag in #22
- M320M dataset by @karinazad in #23
- SMILES regex fast tokenizer by @karinazad in #24
- Nucleotide tokenizer fast by @karinazad in #25
- M320M and ChEMBL datamodules, tokenizer transform by @karinazad in #27
- calm datamodule by @ncfrey in #28
- FlexBERT tweaks by @edwag in #29
- Allow input embeddings to be passed directly to FlexBERT by @edwag in #32
- MoleculeACE linear probe evaluation callback by @karinazad in #31
- deepspeed deps by @ncfrey in #33
- Update push.yml by @ncfrey in #36
- minimal esmc-small implementation by @fdreyer in #37
- configs by @ncfrey in #38
- Add CalmPropertyDataset & CalmLinearProbe Callbacks by @taylormjs in #34
New Contributors
- @Sidney-Lisanza made their first contribution in #20
- @fdreyer made their first contribution in #17
- @edwag made their first contribution in #22
- @karinazad made their first contribution in #23
- @taylormjs made their first contribution in #34
Full Changelog: v0.0.5...v0.0.6
Contributors
kleinhenz, edwag, and 5 other contributors
Assets 2
v0.0.5
Contributors
kleinhenz
Assets 2
v0.0.4
What's Changed
- don't publish every commit to main by @kleinhenz in #11
- Fix typos by @chaitjo in #12
- DyAb by @hofmannjl in #13
- dependencies by @kleinhenz in #18
New Contributors
- @chaitjo made their first contribution in #12
- @hofmannjl made their first contribution in #13
Full Changelog: v0.0.3...v0.0.4
Contributors
kleinhenz, chaitjo, and hofmannjl