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    205 repositories

    • clin-pipelines-dags

      Public
      Airflow dags definition
      Python
      •
      Apache License 2.0
      •0•0•0•2•Updated Mar 3, 2025Mar 3, 2025

    • terraform-libvirt-postgres-server

      Public
      Terraform module to provision a postgres server
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • poc-airflow-dbt

      Public
      POC for airflow, dbt, cosmos, and starrocks
      Python
      •0•0•0•1•Updated Mar 3, 2025Mar 3, 2025

    • radiant-portal

      Public
      Radiant data platform
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • ferlab-svclustering

      Public
      Nextflow
      •
      Apache License 2.0
      •0•0•0•1•Updated Mar 3, 2025Mar 3, 2025

    • cqdg-portal-ui

      Public
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 28, 2025Feb 28, 2025

    • quality-control-pipeline

      Public
      Nextflow
      •
      Apache License 2.0
      •0•0•0•1•Updated Feb 27, 2025Feb 27, 2025

    • ferlab-ui

      Public
      Shared Components
      TypeScript
      •
      Apache License 2.0
      •8•2•1•3•Updated Feb 27, 2025Feb 27, 2025

    • obo-parser

      Public
      Scala
      •
      Apache License 2.0
      •0•2•0•0•Updated Feb 26, 2025Feb 26, 2025

    • users-api

      Public
      API to manage users
      TypeScript
      •
      Apache License 2.0
      •5•0•0•6•Updated Feb 26, 2025Feb 26, 2025

    • unic-dag

      Public
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Feb 25, 2025Feb 25, 2025

    • kvm-dev-orchestrations

      Public
      This repo is meant to help the operations team troubleshoot our kvm modules locally
      HCL
      •
      Apache License 2.0
      •0•1•0•1•Updated Feb 24, 2025Feb 24, 2025

    • terraform-libvirt-transport-load-balancer

      Public
      Dynamically adjustable load balancer with optional ssh tunnel support
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

    • terraform-cloudinit-templates

      Public
      Our reusable cloud-init templates across clouds, organized as terraform modules in a monorepo
      Smarty
      •
      Apache License 2.0
      •0•2•0•1•Updated Feb 24, 2025Feb 24, 2025

    • terraform-etcd-envoy-transport-configuration

      Public
      Terraform module to generate an envoy transport load balancer configuration and store it in an etcd key value
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

    • envoy-transport-control-plane

      Public
      Simple control plane implementation for a transport envoy load balancer
      Go
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

    • terracd

      Public
      This is a continuous delivery tool for terraform that supports a gitops methodology
      Go
      •
      Apache License 2.0
      •0•1•0•0•Updated Feb 21, 2025Feb 21, 2025

    • Post-processing-Pipeline

      Public
      Variant analysis for genome and exome VGCFs
      Nextflow
      •
      Apache License 2.0
      •0•0•5•0•Updated Feb 20, 2025Feb 20, 2025

    • terraform-etcd-prometheus-configuration

      Public
      Terraform module to generate prometheus configuration and store it in an etcd key value
      Smarty
      •
      Apache License 2.0
      •0•0•0•1•Updated Feb 20, 2025Feb 20, 2025

    • clin-docs

      Public
      Dockerfile
      •
      Apache License 2.0
      •0•1•0•0•Updated Feb 19, 2025Feb 19, 2025

    • terraform-null-kubernetes-installation

      Public
      Terraform module to install kubernetes on existing infrastructure using kubespray
      HCL
      •
      Apache License 2.0
      •0•1•0•1•Updated Feb 18, 2025Feb 18, 2025

    • terraform-tls-patroni-certificates

      Public
      Terraform module to provision the patroni/postgres server certificate as well as a client certificate for patroni
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

    • terraform-libvirt-smrtlink-server

      Public
      Terraform module to provision a PacBio SMRT Link server
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 13, 2025Feb 13, 2025

    • postgres-chaos-analyst

      Public
      Tool that cause switchovers and node failures in a postgres patroni cluster and measure their impact on clients
      Go
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

    • terraform-openstack-postgres-server

      Public
      Patroni-managed postgres server for openstack
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

    • terraform-openstack-postgres-security-groups

      Public
      Security groups for a Patroni-managed postgres cluster with load balancers on openstack
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

    • smrtlink-scripts

      Public
      Scripts related to PacBio SMRT Link data
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

    • pipeline-exploration-tools

      Public
      Tools to inspect or prepare data
      Apache License 2.0
      •0•0•0•0•Updated Jan 31, 2025Jan 31, 2025

    • terraform-libvirt-kubernetes-load-balancer

      Public
      Terraform module to provision a kubernetes load balancer for the masters' api traffic and the workers ingress traffic
      HCL
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 31, 2025Jan 31, 2025

    • cqdg-data-templates

      Public
      Apache License 2.0
      •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025