Merge pull request #26 from obophenotype/ODK-release-September-21-2020

ODK release September 21 2020
obophenotype · Sep 21, 2020 · b84912b · b84912b
2 parents fce7696 + 7213306
commit b84912b
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Showing 15 changed files with 2,471 additions and 2,446 deletions.
diff --git a/imports/ro_import.owl b/imports/ro_import.owl
@@ -16,7 +16,7 @@
      xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/imports/ro_import.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-08-07/imports/ro_import.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-09-21/imports/ro_import.owl"/>
     </owl:Ontology>
 
 

diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl
@@ -16,7 +16,7 @@
      xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/imports/ro_import.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-08-07/imports/ro_import.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-09-21/imports/ro_import.owl"/>
     </owl:Ontology>
 
 

diff --git a/src/ontology/ontologyterms.txt b/src/ontology/ontologyterms.txt
diff --git a/wbls-base.json b/wbls-base.json
diff --git a/wbls-base.obo b/wbls-base.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: wbls/releases/2020-08-07/wbls-base.owl
+data-version: wbls/releases/2020-09-21/wbls-base.owl
 date: 15:11:2017 12:24
 saved-by: chris-grove
 auto-generated-by: OBO-Edit 2.2-rc1
@@ -474,6 +474,7 @@ relationship: part_of WBls:0000034 ! postdauer-L4 molt Ce
 id: WBls:0000052
 name: post dauer L3 stage Ce
 def: "The stage right after an animal recovered from dauer but has not started transformation to L4 larva yet." [PMID:27417559, WB:wjc]
+synonym: "dauer exit" EXACT []
 synonym: "PDL3" EXACT []
 is_a: WBls:0000827 ! post dauer stage Ce
 relationship: part_of WBls:0000023 ! larva Ce

diff --git a/wbls-base.owl b/wbls-base.owl
@@ -11,7 +11,7 @@
      xmlns:terms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/wbls/wbls-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-08-07/wbls-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/wbls/releases/2020-09-21/wbls-base.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/WBls_0000075"/>
         <dc:description>Ontology about the development and life stages of the C. elegans</dc:description>
         <dc:title>C. elegans Development Ontology</dc:title>
@@ -1801,6 +1801,7 @@
         </rdfs:subClassOf>
         <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The stage right after an animal recovered from dauer but has not started transformation to L4 larva yet.</obo:IAO_0000115>
         <oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PDL3</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">dauer exit</oboInOwl:hasExactSynonym>
         <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">worm_development</oboInOwl:hasOBONamespace>
         <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">WBls:0000052</oboInOwl:id>
         <rdfs:isDefinedBy rdf:datatype="http://www.w3.org/2001/XMLSchema#string">&quot;By ~10-12 hours after stimulation to recovery at 20 degrees Celsius, or ~7-8 hours at 25 degrees Celsius, they reach the  PDL3  (post-dauer  L3  stage),  where  cell  division  and  development  have  resumed.  Cell  fates,  including  cell divisions and expression of cell fate markers, are equivalent between L3 and PDL3 stages (Liu and Ambros, 1991; Euling  and  Ambros,  1996;  Braendle  and  Félix,  2008;  Karp  and  Greenwald,  2013).  However,  no  molt  occurs between dauer and PDL3. Thus, dauer alae are still visible on the cuticle, although more difficult to see because they become stretched as the larva loses radial constriction and begins to grow (Cassada and Russell, 1975; Riddle et al.,1997).&quot;</rdfs:isDefinedBy>