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revert back changes for testing
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MariekeVromman committed Apr 11, 2024
1 parent 63cfd78 commit cf0a055
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3 changes: 0 additions & 3 deletions modules/local/ciriquant/ciriquant/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -24,9 +24,6 @@ process CIRIQUANT {
prefix = task.ext.prefix ?: "${meta.id}"
def VERSION = '2.1.0'
"""
mkdir -p ${prefix}
mkdir -p ${prefix}/circ
touch ${prefix}/circ/${prefix}.ciri
CIRIquant \\
-t ${task.cpus} \\
-1 ${reads[0]} \\
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