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Move svmbir dependency to examples dependency list
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bwohlberg committed Dec 22, 2023
1 parent f416394 commit b7bc655
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Showing 4 changed files with 6 additions and 3 deletions.
4 changes: 3 additions & 1 deletion .github/workflows/pytest_macos.yml
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Expand Up @@ -59,11 +59,13 @@ jobs:
pip install pytest-split
pip install -r requirements.txt
pip install -r dev_requirements.txt
mamba install -c conda-forge svmbir>=0.3.3
mamba install -c astra-toolbox astra-toolbox
mamba install -c conda-forge pyyaml
pip install --upgrade --force-reinstall scipy>=1.6.0 # Temporary fix for GLIBCXX_3.4.30 not found in conda forge version
pip install bm3d>=4.0.0
pip install bm4d>=4.0.0
pip install "ray[tune]>=2.0.0"
pip install "ray[tune]>=2.5.0"
pip install hyperopt
# Install package to be tested
- name: Install package to be tested
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3 changes: 2 additions & 1 deletion .github/workflows/pytest_ubuntu.yml
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Expand Up @@ -62,12 +62,13 @@ jobs:
pip install pytest-split
pip install -r requirements.txt
pip install -r dev_requirements.txt
mamba install -c conda-forge svmbir>=0.3.3
mamba install -c astra-toolbox astra-toolbox
mamba install -c conda-forge pyyaml
pip install --upgrade --force-reinstall scipy>=1.6.0 # Temporary fix for GLIBCXX_3.4.30 not found in conda forge version
pip install bm3d>=4.0.0
pip install bm4d>=4.2.2
pip install "ray[tune]>=2.0.0"
pip install "ray[tune]>=2.5.0"
pip install hyperopt
# Install package to be tested
- name: Install package to be tested
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1 change: 1 addition & 0 deletions examples/examples_requirements.txt
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@@ -1,6 +1,7 @@
-r ../requirements.txt
tifffile
colour_demosaicing
svmbir>=0.3.3
astra-toolbox
xdesign>=0.5.5
ray[tune,train]>=2.5.0
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1 change: 0 additions & 1 deletion requirements.txt
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Expand Up @@ -7,5 +7,4 @@ jaxlib>=0.4.3,<=0.4.23
jax>=0.4.3,<=0.4.23
orbax-checkpoint
flax>=0.6.1,<=0.7.5
svmbir>=0.3.3
pyabel>=0.9.0

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