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  1. iqtree2 iqtree2 Public

    NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org

    C++ 270 61

  2. piqtree piqtree Public

    a python library that exposes features from iqtree2 - efficient software for phylogenomic inference

    Python 26 4

  3. decenttree decenttree Public

    Fast Neighbor-Joining and other distance-based methods for phylogenetics

    C++ 13 6

  4. cmaple cmaple Public

    MAximum Parsimonious Likelihood Estimation in C/C++

    C 7 3

  5. iqtree3 iqtree3 Public

    C++ 5 2

  6. iqtree1 iqtree1 Public

    IQ-TREE version 1

    C++ 2 2

Repositories

Showing 9 of 9 repositories
  • iqtree3 Public
    iqtree/iqtree3’s past year of commit activity
    C++ 5 GPL-2.0 2 0 0 Updated Mar 6, 2025
  • piqtree Public

    a python library that exposes features from iqtree2 - efficient software for phylogenomic inference

    iqtree/piqtree’s past year of commit activity
    Python 26 GPL-2.0 4 3 (2 issues need help) 3 Updated Mar 3, 2025
  • iqtree2 Public

    NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org

    iqtree/iqtree2’s past year of commit activity
    C++ 270 GPL-2.0 61 89 3 Updated Mar 2, 2025
  • cmaple Public

    MAximum Parsimonious Likelihood Estimation in C/C++

    iqtree/cmaple’s past year of commit activity
    C 7 GPL-2.0 3 6 0 Updated Feb 28, 2025
  • paml Public
    iqtree/paml’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Feb 24, 2025
  • iqtree.github.io Public
    iqtree/iqtree.github.io’s past year of commit activity
    CSS 1 4 0 4 Updated Feb 7, 2025
  • decenttree Public

    Fast Neighbor-Joining and other distance-based methods for phylogenetics

    iqtree/decenttree’s past year of commit activity
    C++ 13 GPL-2.0 6 5 3 Updated Jun 21, 2024
  • cmaple_api Public

    A Demo of CMaple API documentation

    iqtree/cmaple_api’s past year of commit activity
    0 0 0 0 Updated May 14, 2024
  • iqtree1 Public

    IQ-TREE version 1

    iqtree/iqtree1’s past year of commit activity
    C++ 2 GPL-2.0 2 0 0 Updated Jun 17, 2020

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