feat: SJIP-1214 Refactor Cypress tests - Solve skip tests and split f…

…ile tests
include-dcc · Feb 28, 2025 · 81ef1af · 81ef1af
1 parent 1dfcd38
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diff --git a/cypress/e2e/CavaticaButton/PageDataExploration_1.cy.ts b/cypress/e2e/CavaticaButton/PageDataExploration_1.cy.ts
@@ -0,0 +1,18 @@
+/// <reference types="cypress"/>
+import '../../support/commands';
+
+beforeEach(() => {
+  cy.login();
+  cy.visitDataExploration('datafiles', '?sharedFilterId=75272e84-9a2d-4e0b-b69e-fb9e5df63762');
+  cy.get('tr[data-row-key="HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz"] [type="checkbox"]').check({force: true});
+  cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
+});
+
+describe('Page Dashboard - Bouton Analyze in Cavatica (déconnecté)', () => {
+  it('Vérifier les informations affichées - Modal', () => {
+    cy.get('[class="ant-modal-confirm-body"]').contains('Connect to Cavatica').should('exist');
+    cy.get('[class="ant-modal-confirm-body"]').contains('In order to analyze your files you must first connect your Cavatica account. Once you are connected, you will be redirected back to this page.').should('exist');
+    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-default"]').contains('Cancel').should('exist');
+    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-primary"]').contains('Connect').should('exist');
+  });
+});
diff --git a/cypress/e2e/CavaticaButton/PageFile.cy.ts → ...avaticaButton/PageDataExploration_2.cy.ts b/cypress/e2e/CavaticaButton/PageFile.cy.ts → ...avaticaButton/PageDataExploration_2.cy.ts
@@ -3,56 +3,40 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
-});
-
-describe('Page Dashboard - Bouton Analyze in Cavatica (déconnecté)', () => {
-  beforeEach(() => {
-    cy.visitFileEntity('HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz');
-    cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
-  });
+  cy.intercept('GET', '**/cavatica/authenticated', {
+    statusCode: 200,
+    body: {
+      "authenticated": true,
+      "expiration": 1722180513
+    },
+  }).as('cavaticaAuthenticated');
+  cy.intercept('GET', '**/cavatica2/v2/projects', {
+    statusCode: 200,
+    body: {
+      "href": "https://cavatica-api.sbgenomics.com/v2/projects?offset=0&limit=50",
+      "items": [
+          {
+              "href": "https://cavatica-api.sbgenomics.com/v2/projects/mock/cypress-project",
+              "id": "mock/cypress-project",
+              "name": "Cypress-Project",
+              "category": "PRIVATE",
+              "created_by": "mock",
+              "created_on": "2024-07-05T00:00:00Z",
+              "modified_on": "2024-07-05T00:00:00Z"
+          }
+      ],
+      "links": []
+  },
+  }).as('cavaticaProjects');
 
-  it('Vérifier les informations affichées - Modal', () => {
-    cy.get('[class="ant-modal-confirm-body"]').contains('Connect to Cavatica').should('exist');
-    cy.get('[class="ant-modal-confirm-body"]').contains('In order to analyze your files you must first connect your Cavatica account. Once you are connected, you will be redirected back to this page.').should('exist');
-    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-default"]').contains('Cancel').should('exist');
-    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-primary"]').contains('Connect').should('exist');
-  });
+  cy.visitDataExploration('datafiles', '?sharedFilterId=75272e84-9a2d-4e0b-b69e-fb9e5df63762');
+  cy.wait('@cavaticaAuthenticated');
+  cy.wait('@cavaticaProjects');
+  cy.get('tr[data-row-key="HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz"] [type="checkbox"]').check({force: true});
+  cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
 });
 
 describe('Page Dashboard - Bouton Analyze in Cavatica (connecté)', () => {
-  beforeEach(() => {
-    cy.intercept('GET', '**/cavatica/authenticated', {
-      statusCode: 200,
-      body: {
-        "authenticated": true,
-        "expiration": 1722180513
-      },
-    }).as('cavaticaAuthenticated');
-    cy.intercept('GET', '**/cavatica2/v2/projects', {
-      statusCode: 200,
-      body: {
-        "href": "https://cavatica-api.sbgenomics.com/v2/projects?offset=0&limit=50",
-        "items": [
-            {
-                "href": "https://cavatica-api.sbgenomics.com/v2/projects/mock/cypress-project",
-                "id": "mock/cypress-project",
-                "name": "Cypress-Project",
-                "category": "PRIVATE",
-                "created_by": "mock",
-                "created_on": "2024-07-05T00:00:00Z",
-                "modified_on": "2024-07-05T00:00:00Z"
-            }
-        ],
-        "links": []
-    },
-    }).as('cavaticaProjects');
-
-    cy.visitFileEntity('HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz');
-    cy.wait('@cavaticaAuthenticated');
-    cy.wait('@cavaticaProjects');
-    cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
-  });
-
   it('Vérifier les informations affichées - Modal', () => {
     cy.get('[class="ant-modal-title"]').contains('Analyze in Cavatica').should('exist');
     cy.get('[class="ant-modal-body"]').contains('Copy files to...').should('exist');

diff --git a/cypress/e2e/CavaticaButton/PageFile_1.cy.ts b/cypress/e2e/CavaticaButton/PageFile_1.cy.ts
@@ -0,0 +1,17 @@
+/// <reference types="cypress"/>
+import '../../support/commands';
+
+beforeEach(() => {
+  cy.login();
+  cy.visitFileEntity('HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz');
+  cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
+});
+
+describe('Page Dashboard - Bouton Analyze in Cavatica (déconnecté)', () => {
+  it('Vérifier les informations affichées - Modal', () => {
+    cy.get('[class="ant-modal-confirm-body"]').contains('Connect to Cavatica').should('exist');
+    cy.get('[class="ant-modal-confirm-body"]').contains('In order to analyze your files you must first connect your Cavatica account. Once you are connected, you will be redirected back to this page.').should('exist');
+    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-default"]').contains('Cancel').should('exist');
+    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-primary"]').contains('Connect').should('exist');
+  });
+});
diff --git a/.../CavaticaButton/PageDataExploration.cy.ts → cypress/e2e/CavaticaButton/PageFile_2.cy.ts b/.../CavaticaButton/PageDataExploration.cy.ts → cypress/e2e/CavaticaButton/PageFile_2.cy.ts
@@ -3,58 +3,39 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
-});
-
-describe('Page Dashboard - Bouton Analyze in Cavatica (déconnecté)', () => {
-  beforeEach(() => {
-    cy.visitDataExploration('datafiles', '?sharedFilterId=75272e84-9a2d-4e0b-b69e-fb9e5df63762');
-    cy.get('tr[data-row-key="HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz"] [type="checkbox"]').check({force: true});
-    cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
-  });
+  cy.intercept('GET', '**/cavatica/authenticated', {
+    statusCode: 200,
+    body: {
+      "authenticated": true,
+      "expiration": 1722180513
+    },
+  }).as('cavaticaAuthenticated');
+  cy.intercept('GET', '**/cavatica2/v2/projects', {
+    statusCode: 200,
+    body: {
+      "href": "https://cavatica-api.sbgenomics.com/v2/projects?offset=0&limit=50",
+      "items": [
+          {
+              "href": "https://cavatica-api.sbgenomics.com/v2/projects/mock/cypress-project",
+              "id": "mock/cypress-project",
+              "name": "Cypress-Project",
+              "category": "PRIVATE",
+              "created_by": "mock",
+              "created_on": "2024-07-05T00:00:00Z",
+              "modified_on": "2024-07-05T00:00:00Z"
+          }
+      ],
+      "links": []
+  },
+  }).as('cavaticaProjects');
 
-  it('Vérifier les informations affichées - Modal', () => {
-    cy.get('[class="ant-modal-confirm-body"]').contains('Connect to Cavatica').should('exist');
-    cy.get('[class="ant-modal-confirm-body"]').contains('In order to analyze your files you must first connect your Cavatica account. Once you are connected, you will be redirected back to this page.').should('exist');
-    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-default"]').contains('Cancel').should('exist');
-    cy.get('[class="ant-modal-confirm-btns"] button[class*="ant-btn-primary"]').contains('Connect').should('exist');
-  });
+  cy.visitFileEntity('HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz');
+  cy.wait('@cavaticaAuthenticated');
+  cy.wait('@cavaticaProjects');
+  cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
 });
 
 describe('Page Dashboard - Bouton Analyze in Cavatica (connecté)', () => {
-  beforeEach(() => {
-    cy.intercept('GET', '**/cavatica/authenticated', {
-      statusCode: 200,
-      body: {
-        "authenticated": true,
-        "expiration": 1722180513
-      },
-    }).as('cavaticaAuthenticated');
-    cy.intercept('GET', '**/cavatica2/v2/projects', {
-      statusCode: 200,
-      body: {
-        "href": "https://cavatica-api.sbgenomics.com/v2/projects?offset=0&limit=50",
-        "items": [
-            {
-                "href": "https://cavatica-api.sbgenomics.com/v2/projects/mock/cypress-project",
-                "id": "mock/cypress-project",
-                "name": "Cypress-Project",
-                "category": "PRIVATE",
-                "created_by": "mock",
-                "created_on": "2024-07-05T00:00:00Z",
-                "modified_on": "2024-07-05T00:00:00Z"
-            }
-        ],
-        "links": []
-    },
-    }).as('cavaticaProjects');
-
-    cy.visitDataExploration('datafiles', '?sharedFilterId=75272e84-9a2d-4e0b-b69e-fb9e5df63762');
-    cy.wait('@cavaticaAuthenticated');
-    cy.wait('@cavaticaProjects');
-    cy.get('tr[data-row-key="HTP.ce770763-b904-4c66-8b08-c54dd4e7c7b5.rsem.isoforms.results.gz"] [type="checkbox"]').check({force: true});
-    cy.get('button[aria-label="Analyze in Cavatica"]').clickAndWait({force: true});
-  });
-
   it('Vérifier les informations affichées - Modal', () => {
     cy.get('[class="ant-modal-title"]').contains('Analyze in Cavatica').should('exist');
     cy.get('[class="ant-modal-body"]').contains('Copy files to...').should('exist');

diff --git a/cypress/e2e/Colonnes/TableauBiospecimens.cy.ts b/cypress/e2e/Colonnes/TableauBiospecimens.cy.ts
@@ -3,13 +3,10 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitDataExploration('biospecimens');
 });
 
 describe('Page Data Exploration (Biospecimens) - Colonnes du tableau', () => {
-  beforeEach(() => {
-    cy.visitDataExploration('biospecimens');
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('thead[class="ant-table-thead"]')
       .find('th[class*="ant-table-cell"]').eq(1)

diff --git a/cypress/e2e/Colonnes/TableauFiles.cy.ts b/cypress/e2e/Colonnes/TableauFiles.cy.ts
@@ -3,13 +3,10 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitDataExploration('datafiles');
 });
 
 describe('Page Data Exploration (Files) - Colonnes du tableau', () => {
-  beforeEach(() => {
-    cy.visitDataExploration('datafiles');
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('thead[class="ant-table-thead"]')
       .find('th[class*="ant-table-cell"]').eq(1)

diff --git a/cypress/e2e/Colonnes/TableauParticipants.cy.ts b/cypress/e2e/Colonnes/TableauParticipants.cy.ts
@@ -3,13 +3,10 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitDataExploration('participants');
 });
 
 describe('Page Data Exploration (Participants) - Colonnes du tableau', () => {
-  beforeEach(() => {
-    cy.visitDataExploration('participants');
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('thead[class="ant-table-thead"]')
       .find('th[class*="ant-table-cell"]').eq(1)

diff --git a/cypress/e2e/Colonnes/TableauStudies.cy.ts b/cypress/e2e/Colonnes/TableauStudies.cy.ts
@@ -3,13 +3,10 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitStudiesPage();
 });
 
 describe('Page des études - Colonnes du tableau', () => {
-  beforeEach(() => {
-    cy.visitStudiesPage();
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('thead[class="ant-table-thead"]')
       .find('th[class*="ant-table-cell"]').eq(0)

diff --git a/cypress/e2e/Colonnes/TableauVariants.cy.ts b/cypress/e2e/Colonnes/TableauVariants.cy.ts
@@ -3,13 +3,10 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitVariantsPage();
 });
 
 describe('Page des variants - Colonnes du tableau', () => {
-  beforeEach(() => {
-    cy.visitVariantsPage();
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('thead[class="ant-table-thead"]')
       .find('th[class*="ant-table-cell"]').eq(1)

diff --git a/cypress/e2e/Colonnes/TableauxPageFile.cy.ts b/cypress/e2e/Colonnes/TableauxPageFile.cy.ts
@@ -3,14 +3,11 @@ import '../../support/commands';
 
 beforeEach(() => {
   cy.login();
+  cy.visitFileEntity('HTP.1730dafb-464b-4aa6-b2dc-35f729cbdb2d.CGP.filtered.deNovo.vep.vcf.gz');
+  cy.resetColumns('participant-sample');
 });
 
 describe('Page d\'un fichier - Colonnes du tableau Participants-Samples', () => {
-  beforeEach(() => {
-    cy.visitFileEntity('HTP.1730dafb-464b-4aa6-b2dc-35f729cbdb2d.CGP.filtered.deNovo.vep.vcf.gz');
-    cy.resetColumns('participant-sample');
-  });
-
   it('Valider l\'affichage (par défaut/optionnel) et l\'ordre des colonnes', () => {
     cy.get('[id="participant-sample"]')
       .find('thead[class="ant-table-thead"]')