Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Change from fastqc to falco in ref-based-rad-seq tutorial #5806

Open
wants to merge 1 commit into
base: main
Choose a base branch
from

Conversation

VerenaMoo
Copy link
Contributor

I changed the tutorial to use Falco instead of FastQC.

@VerenaMoo VerenaMoo requested a review from a team as a code owner February 27, 2025 14:21
@shiltemann
Copy link
Member

shiltemann commented Feb 27, 2025

Thanks @VerenaMoo! Could you also update the MultiQC step as needed? At least the input file should say its the output from Falco, not FastQC.

@wm75 should we update the MultiQC tool to support option "output from Falco" even if behind the scenes the same thing happens as the FastQC option (I assume), just for clarity?

@wm75
Copy link
Contributor

wm75 commented Feb 28, 2025

@shiltemann maybe a combined opion FastQC or Falco ?

@shiltemann
Copy link
Member

@wm75 yes good idea

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants