fixing trailing whitespace #40

	# .github/workflows/ci.yml

	name: CI

	on:
	push:
	branches: [ main ]
	pull_request:
	branches: [ main ]

	jobs:
	build:

	runs-on: ubuntu-latest

	strategy:
	matrix:
	python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]

	steps:
	- uses: actions/checkout@v3

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -e .
	pip install pytest pytest-cov flake8 black

	- name: Lint with Flake8
	run: \|
	flake8 protein_design_tools tests

	- name: Format Check with Black
	run: \|
	black --check protein_design_tools tests

	- name: Run Tests with Coverage
	run: \|
	pytest --verbose --cov=protein_design_tools --cov-report=xml tests/

	- name: Upload coverage to Codecov
	if: success()
	uses: codecov/codecov-action@v3
	with:
	token: ${{ secrets.CODECOV_TOKEN }} # Ensure you add this secret in your repo settings
	files: ./coverage.xml
	flags: unittests
	name: codecov-umbrella
	fail_ci_if_error: true

	- name: Upload test results to Codecov
	if: ${{ !cancelled() }}
	uses: codecov/test-results-action@v1
	with:
	token: ${{ secrets.CODECOV_TOKEN }}

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