Update __init__.py #39
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| # .github/workflows/ci.yml | |
| name: CI | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e . | |
| pip install pytest pytest-cov flake8 black | |
| - name: Lint with Flake8 | |
| run: | | |
| flake8 protein_design_tools tests | |
| - name: Format Check with Black | |
| run: | | |
| black --check protein_design_tools tests | |
| - name: Run Tests with Coverage | |
| run: | | |
| pytest --verbose --cov=protein_design_tools --cov-report=xml tests/ | |
| - name: Upload coverage to Codecov | |
| if: success() | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} # Ensure you add this secret in your repo settings | |
| files: ./coverage.xml | |
| flags: unittests | |
| name: codecov-umbrella | |
| fail_ci_if_error: true | |
| - name: Upload test results to Codecov | |
| if: ${{ !cancelled() }} | |
| uses: codecov/test-results-action@v1 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} |