UNITE v9.0 v25.07.2023 for qiime2-2023.7
Pre-release
This is a classifier for Unite v9.0 Version 18.07.2023 trained for use with Qiime2 2023.7.
These can be used with q2-feature-classifier like those found on the Data resources page.
UNITE is licensed under CC BY-SA 4.0. If you use it, cite it! 🤝
Abarenkov, Kessy; Zirk, Allan; Piirmann, Timo; Pöhönen, Raivo; Ivanov, Filipp; Nilsson, R. Henrik; Kõljalg, Urmas (2022): UNITE QIIME release for Fungi. Version 18.07.2023. UNITE Community <DOI GOES HERE>
DOIs for specific releases are listed here: https://unite.ut.ee/repository.php
Changes:
- Update Qiime2 to version 2023.7
- Internal changes:
- Add basic benchmarks
- Change default cluster settings
- Import using new MixedCaseDNAFASTAFormat (thanks @mikerobeson!)
There are two levels of classification provided here:
- "99", which is 99% identity between taxa
- "dynamic", which uses 97% to 99% identity between taxa, as individually recommended by experts in the field.
There are two taxa scopes:
- "" Just Fungi
- "all" All eukaryotes
There two versions, with and without an "s":
- "" Includes singletons set as RefS (in dynamic files).
- "s" Includes global and 97% singletons.
(I'm not sure what that means.)
Notes on dates:
On the main UNITE download page, Version number 9.0 has a Release date of 2023-07-18.
However, the notes and file name say 'Version 18.07.2023' which is when it was updated (webpage, api)
I'm using the newer file.
All feedback is welcome! Please open an issue! ✅
