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Demo! qiime2-2022.8-v8.3

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@colinbrislawn colinbrislawn released this 12 Sep 14:46
· 53 commits to main since this release

⚠️ This is a public demo, and has not been validated. I am not affiliated with the UNITE team. Use at your own risk!

This is a classifier for version 8.3 of the UNITE database trained for use with qiime2-2022.8 (install guide, release notes).

UNITE is licensed under CC BY-SA 4.0. If you use it, cite it! 🤝

Abarenkov, Kessy; Zirk, Allan; Piirmann, Timo; Pöhönen, Raivo; Ivanov, Filipp; Nilsson, R. Henrik; Kõljalg, Urmas (2021): UNITE QIIME release for Fungi 2. Version 10.05.2021. UNITE Community. https://doi.org/10.15156/BIO/1264763


Changes:

  • Update Qiime2 to 2022.8

There are three levels of classification provided here:

  • "97", which is 97% identity between taxa
  • "99", which is 99% identity between taxa
  • "dynamic", which uses 97% to 99% identity between taxa, as individually recommended by experts in the field.

There are two taxa scopes:

  • "" Fungi
  • "all" All eukaryotes

There is also version with and without an "s". (what does that mean?):

  • "" Includes singletons set as RefS (in dynamic files).
  • "s" Includes global and 97% singletons.

All feedback is welcome! Please open an issue!