updating TestMultiome to run peak calling

broadinstitute · Feb 3, 2025 · ba0982a · ba0982a
1 parent 1a02ba7
commit ba0982a
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/verification/test-wdls/TestMultiome.wdl b/verification/test-wdls/TestMultiome.wdl
@@ -52,6 +52,7 @@ workflow TestMultiome {
       String vault_token_path
       String google_account_vault_path
       Boolean run_cellbender = false
+      Boolean run_peak_calling = false
 
     }
 
@@ -86,7 +87,8 @@ workflow TestMultiome {
         soloMultiMappers = soloMultiMappers,
         cloud_provider = cloud_provider,
         gex_nhash_id = gex_nhash_id,
-        atac_nhash_id = atac_nhash_id
+        atac_nhash_id = atac_nhash_id,
+        run_peak_calling = run_peak_calling
     }