coerce aligned_bam? to aligned_bam

coerce aligned_bam? to aligned_bam, which may fail at runtime but it shouldn't matter here
broadinstitute · Feb 28, 2025 · 8164dee · 8164dee
1 parent 63f0b90
commit 8164dee
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pipes/WDL/workflows/genbank_single.wdl b/pipes/WDL/workflows/genbank_single.wdl
@@ -137,7 +137,7 @@ workflow genbank_single {
         call ncbi.structured_comments_from_aligned_bam {
           input:
             out_basename = assembly_id,
-            aligned_bam = aligned_bam
+            aligned_bam = select_first([aligned_bam])
         }
     }