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Just covid mts #27

Merged
merged 2 commits into from
Oct 24, 2024
Merged

Just covid mts #27

merged 2 commits into from
Oct 24, 2024

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EtomicBomb
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@vagos
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vagos commented Oct 24, 2024

Very nice, merged

@vagos vagos merged commit 4aa26f6 into binpash:main Oct 24, 2024
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Zhuoxuan-Zhang pushed a commit to Zhuoxuan-Zhang/benchmarks that referenced this pull request Nov 12, 2024
- Renamed `bio/inputs.sh` to `bio/deps.sh` and removed unnecessary code.
- Updated `bio/run.sh` to use the correct input file name.
- Removed unused code from `bio/input.sh`.
- Cleaned up `bio/verify.sh` and added comments.

Closes binpash#27
vagos pushed a commit to Zhuoxuan-Zhang/benchmarks that referenced this pull request Jan 3, 2025
- Renamed `bio/inputs.sh` to `bio/deps.sh` and removed unnecessary code.
- Updated `bio/run.sh` to use the correct input file name.
- Removed unused code from `bio/input.sh`.
- Cleaned up `bio/verify.sh` and added comments.

Closes binpash#27
vagos added a commit that referenced this pull request Jan 3, 2025
* build samtools

* bio hash not ready

* Remove unnecessary bio scripts and input setup script

* Refactor bio scripts and input setup

- Renamed `bio/inputs.sh` to `bio/deps.sh` and removed unnecessary code.
- Updated `bio/run.sh` to use the correct input file name.
- Removed unused code from `bio/input.sh`.
- Cleaned up `bio/verify.sh` and added comments.

Closes #27

* nlp no pass?

* nlp?

* Rename input_all to input and add input_small

Signed-off-by: Evangelos Lamprou <vagos@lamprou.xyz>

* Fix verify output format

Signed-off-by: Evangelos Lamprou <vagos@lamprou.xyz>

* Fix bio

Signed-off-by: Evangelos Lamprou <vagos@lamprou.xyz>

---------

Signed-off-by: Evangelos Lamprou <vagos@lamprou.xyz>
Co-authored-by: Zhuoxuan Zhang <hzhang6@oberlin.edu>
Co-authored-by: Evangelos Lamprou <vagos@lamprou.xyz>
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2 participants