Merge branch 'master' into dev

adrientaudiere · Jul 1, 2024 · 3f09139 · 3f09139
2 parents ea5aad0 + 0af6a69
commit 3f09139
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -35,7 +35,7 @@ jobs:
         run: sudo apt-get install ncbi-blast+
 
       - name: Install R packages not in DESCRIPTION
-        run: Rscript -e 'pak::pkg_install(c("datawizard", "formattable", "ggforce", "ggtree", "gtExtras", "MicrobiotaProcess", "pillar", "pointblank", "summarytools", "svglite", "tidytree", "treeio", "fastqcr"))'
+        run: Rscript -e 'pak::pkg_install(c("datawizard", "formattable", "ggplot2", "ComplexUpset", "ggforce", "ggtree", "gtExtras", "MicrobiotaProcess", "pillar", "pointblank", "summarytools", "svglite", "tidytree", "treeio"), ask = FALSE, upgrade=TRUE)'
 
       - name: Build site
         run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE, clean = TRUE)