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.vscode
.vscode
 
 
Docs
Docs
 
 
__pycache__
__pycache__
 
 
tmp
tmp
 
 
.gitignore
.gitignore
 
 
CLINICAL_BLOOD_CHEMISTRY.json
CLINICAL_BLOOD_CHEMISTRY.json
 
 
README.md
README.md
 
 
Structure of the CLIMB Client for DCC XML file generation.docx
Structure of the CLIMB Client for DCC XML file generation.docx
 
 
animalLs.json
animalLs.json
 
 
climb_api.py
climb_api.py
 
 
config.yml
config.yml
 
 
core_api.py
core_api.py
 
 
core_validate.py
core_validate.py
 
 
dcc_xml.py
dcc_xml.py
 
 
filters-with-mice.json
filters-with-mice.json
 
 
filters.json
filters.json
 
 
get_omero_filename.py
get_omero_filename.py
 
 
histo_output_template.py
histo_output_template.py
 
 
histopathology_output_template.csv
histopathology_output_template.csv
 
 
jaxlims_api.py
jaxlims_api.py
 
 
my_logger.py
my_logger.py
 
 
notes.txt
notes.txt
 
 
omero_api.py
omero_api.py
 
 
orig-animalLs.json
orig-animalLs.json
 
 
out.txt
out.txt
 
 
qc_report_parser.py
qc_report_parser.py
 
 
read_config.py
read_config.py
 
 
requirements.txt
requirements.txt
 
 
rslims-exps.json
rslims-exps.json
 
 
samples.json
samples.json
 
 
secret.py
secret.py
 
 
test.py
test.py
 
 
validate_procedure.py
validate_procedure.py
 
 

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DccXmlGenerator

This is the Python version of the DCC XML file generator.

As of 2022 it pulls data only from CLIMB. Once the adult phenotypers have settled on which platform they are using we should pull data from that platform also.

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This is the Python version of the DCC XML file generator.

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