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Upgrade to R 4.3.1 #68

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Upgrade to R 4.3.1 #68

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d68abf9
Upgrade to R 4.3.0
djherbis May 16, 2023
3301261
remove r-cran-rgtk2
djherbis May 22, 2023
650a04b
4.3.1
Philmod Jul 26, 2023
e1d6f6d
use 1.9 branch for mxnet
Philmod Jul 26, 2023
11b4c6f
Merge branch 'main' into r-4.3.0
Philmod Oct 4, 2023
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7 changes: 3 additions & 4 deletions Dockerfile
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Package r-cran-rgtk2 is not available, but is referred to by another package.
This may mean that the package is missing, has been obsoleted, or
is only available from another source

E: Package 'r-cran-rgtk2' has no installation candidate

Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM rocker/tidyverse:4.0.5
FROM rocker/tidyverse:4.3.1

RUN apt-get update && \
apt-get install -y build-essential clang imagemagick libmagick++-dev libudunits2-dev curl libgdal-dev \
Expand All @@ -16,15 +16,14 @@ ADD clean-layer.sh /tmp/clean-layer.sh

RUN apt-get update && \
apt-get install apt-transport-https && \
apt-get install -y -f r-cran-rgtk2 && \
apt-get install -y -f libv8-dev libgeos-dev libgdal-dev libproj-dev libsndfile1-dev \
libtiff5-dev fftw3 fftw3-dev libfftw3-dev libjpeg-dev libhdf4-0-alt libhdf4-alt-dev \
libhdf5-dev libx11-dev cmake libglu1-mesa-dev libgtk2.0-dev librsvg2-dev libxt-dev \
patch libgit2-dev && \
/tmp/clean-layer.sh

RUN apt-get update && apt-get install -y build-essential git ninja-build ccache libatlas-base-dev libopenblas-dev libopencv-dev python3-opencv && \
cd /usr/local/share && git clone --recursive --depth=1 --branch v1.8.x https://github.com/apache/incubator-mxnet.git mxnet && \
cd /usr/local/share && git clone --recursive --depth=1 --branch v1.9.x https://github.com/apache/incubator-mxnet.git mxnet && \
cd mxnet && cp config/linux.cmake config.cmake && rm -rf build && \
mkdir -p build && cd build && cmake .. && cmake --build . --parallel $(nproc) && \
cd .. && make -f R-package/Makefile rpkg && \
Expand All @@ -45,4 +44,4 @@ RUN Rscript /tmp/package_installs.R && \
bash -c "rm -Rf /tmp/Rtmp*"

# Used in the `rstats` Jenkins `Docker GPU Build` step to restrict the images being pruned.
LABEL kaggle-lang=r
LABEL kaggle-lang=r