Refactoring

Fluorescence-Tools · Feb 12, 2024 · 41c2515 · 41c2515
1 parent 543c5d3
commit 41c2515
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 10 deletions.
diff --git a/chisurf/fluorescence/fret/fret_line.py b/chisurf/fluorescence/fret/fret_line.py
@@ -183,9 +183,7 @@ def transfer_efficiency(self) -> float:
         return 1.0 - self.fret_species_averaged_lifetime / self.donor_species_averaged_lifetime
 
     @property
-    def polynom_coefficients(
-            self
-    ):
+    def polynom_coefficients(self):
         """
         A numpy array with polynomial coefficients approximating the tauX(tauF) conversion function
         """
@@ -222,7 +220,7 @@ def fdfa_string(self) -> str:
     @property
     def parameter_values(self):
         """
-        The values the parameter as defined by :py:attr:`~chisurf.fluorescence.fret_lines.FRETLineGenerator.parameter_name`
+        The values the parameter as defined by :py:attr:`~chisurf.fluorescence.sm_FRETlines.FRETLineGenerator.parameter_name`
         """
         start, stop = self.parameter_range
         n_points = self.n_points
@@ -297,8 +295,8 @@ class StaticFRETLine(
     Examples
     --------
 
-    >>> import chisurf.tools.fret_lines as fret_lines
-    >>> s = fret_lines.StaticFRETLine()
+    >>> import chisurf.tools.sm_FRETlines as sm_FRETlines
+    >>> s = sm_FRETlines.StaticFRETLine()
     >>> s.calc()
 
     Now lets look at the conversion function in comparison to a 1:1 relation
@@ -362,8 +360,8 @@ class DynamicFRETLine(FRETLineGenerator):
     Examples
     --------
 
-    >>> import chisurf.tools.fret_lines as fret_lines
-    >>> d = fret_lines.DynamicFRETLine()
+    >>> import chisurf.tools.sm_FRETlines as sm_FRETlines
+    >>> d = sm_FRETlines.DynamicFRETLine()
     >>> print d.model
     Model: Gaussian-Donor
     Parameter       Value   Bounds  Fixed   Linke

diff --git a/...ui/tools/configuration_editor/sample.json → ...rf/gui/tools/parameter_editor/sample.json b/...ui/tools/configuration_editor/sample.json → ...rf/gui/tools/parameter_editor/sample.json
diff --git a/chisurf/gui/widgets/experiments/tcspc/controller.py b/chisurf/gui/widgets/experiments/tcspc/controller.py
@@ -45,8 +45,6 @@ def onParametersChanged(self):
             matrix_columns = []
         gfactor = float(self.doubleSpinBox_3.value())
         pol = 'vm'
-        if self.radioButton_4.isChecked():
-            pol = 'vv/vh'
         if self.radioButton_3.isChecked():
             pol = 'vv'
         elif self.radioButton_2.isChecked():