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This repo contains the files of the logical model of psoriatic keratinocytes and its analysis as a Jupyter Notebook.

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Eirinits/psoKC_model

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Psoriatic Keratinocyte (psoKC) model

This repository contains ipynb files and psoriatic keratinocyte model-related files as described in paper "Logical and experimental modeling of cytokine and eicosanoid signaling in psoriatic keratinocyte"

How to run this notebook?

With binder

Binder

With docker

  1. Install the colomoto docker image. The model presented in the paper was tested with the version 2020-01-24.
  2. Install jupyter notebook.
  3. Clone the repository: https://github.com/Eirinits/psoKC_model.git.
  4. Go to the project repository and launch the notebook: colomoto-docker --bind .
  5. The notebook will be available in your web browser at http://localhost:8888/

NB! As of Oct 2024, please use the latest version as the original notebook might show some issues due to syntax updates.

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This repo contains the files of the logical model of psoriatic keratinocytes and its analysis as a Jupyter Notebook.

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