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This repository was archived by the owner on Feb 6, 2024. It is now read-only.

Beta version 1.7-beta10

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@bqminh bqminh released this 18 Apr 03:22
· 31 commits to master since this release
v1.7-beta10
1af405c

New features:

  • Checkpoint time interval is automatically increased if dumping time takes > 5% of the interval.
  • For edge-unlinked partition model (-sp) partition trees with unlinked branch lengths will be printed to .parttrees file (requested by Stephen Crotty).
  • Better handling zero state_freq for nonrev models.
  • Allow to compile OpenMP version with apple-clang (at least Mac OS High Sierra 10.13).
  • Make boost library required by default.
  • Fix problem GTR20+FO optimisation.
  • Zlib compression level is changed from 9 to 1 for speed.
  • New option --df-tree to print tree for gDF1 into cf.stat file (requested by Dan Vanderpool).
  • New option --root-test to test all possible rooting of the final tree.
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