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IQ-TREE version 1.6.5
Bugfixes:
- GTR20 protein model does not optimise rate parameters.
- Replace odd characters in taxon names in tree file by underscore as done with alignment file (issue #31).
- Replace odd characters in taxon names in cluster file by underscore (issue #54).
- Crash with combination of bootstrap (-b option), partition model (-spp) and model testing (-m TEST) at the phase of analysing original alignment (reported by paul.madeira).