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BioDataFuse · Jan 31, 2025 · 4114d09 · 4114d09
1 parent 6102b51
commit 4114d09
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Showing 3 changed files with 114,354 additions and 6 deletions.
diff --git a/examples/usecases/PCS/01_PCS_graph_workflow.ipynb b/examples/usecases/PCS/01_PCS_graph_workflow.ipynb
@@ -1086,9 +1086,10 @@
     ")\n",
     "\n",
     "if not os.path.exists(opentargets_dc_pickle_path):\n",
-    "    opentargets_disease_compound_df, opentargets_disease_compound_metadata = (\n",
-    "        opentargets.get_disease_compound_interactions(disease_mapping_df, cache_pubchem_cid=True)\n",
-    "    )\n",
+    "    (\n",
+    "        opentargets_disease_compound_df,\n",
+    "        opentargets_disease_compound_metadata,\n",
+    "    ) = opentargets.get_disease_compound_interactions(disease_mapping_df, cache_pubchem_cid=True)\n",
     "\n",
     "    opentargets_disease_compound_df.to_pickle(opentargets_dc_pickle_path)\n",
     "    with open(opentargets_dc_metadata_path, \"wb\") as file:\n",
@@ -1218,9 +1219,10 @@
     ")\n",
     "\n",
     "if not os.path.exists(opentargets_gc_pickle_path):\n",
-    "    opentargets_gene_compound_df, opentargets_gene_compound_metadata = (\n",
-    "        opentargets.get_gene_compound_interactions(bridgedb_df)\n",
-    "    )\n",
+    "    (\n",
+    "        opentargets_gene_compound_df,\n",
+    "        opentargets_gene_compound_metadata,\n",
+    "    ) = opentargets.get_gene_compound_interactions(bridgedb_df)\n",
     "\n",
     "    opentargets_gene_compound_df.to_pickle(opentargets_gc_pickle_path)\n",
     "    with open(opentargets_gc_metadata_path, \"wb\") as file:\n",