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cmdoret committed Aug 21, 2024
1 parent 2ecd34b commit ac7823a
Showing 1 changed file with 14 additions and 14 deletions.
28 changes: 14 additions & 14 deletions src/modos.typ
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// Set up paper dimensions and text
#set page(width: 120cm, height: 180cm)
#set text(font: "Museo", size: 36pt, weight: 100)
#set page(width: 84.1cm, height: 118.9cm)
#set text(font: "Museo", size: 26pt, weight: 100)

#let big_text(t) = text(font: "Century Gothic Paneuropean", weight: 300, t);

// Set up colors
#show: theme.with(titletext-size: 122pt)
#show: theme.with(titletext-size: 86pt)

// whenever we type zarr, show the logo :p
#let linkml = box[
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#grid(
columns: 4,
inset: 12mm,
image("/assets/images/logos/sdsc.jpg", height: 3cm),
image("/assets/images/logos/smoc.jpg", height: 4cm),
image("/assets/images/logos/phrt.png", height: 4cm),
image("/assets/images/logos/health2030.jpg", height: 4cm),
image("/assets/images/logos/sdsc.jpg", height: 2cm),
image("/assets/images/logos/smoc.jpg", height: 3cm),
image("/assets/images/logos/phrt.png", height: 3cm),
image("/assets/images/logos/health2030.jpg", height: 3cm),
)],
]

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// color can be overwritten
#normal-box(color: rgb("#e0e2efff"))[
#big_text[= Objectives]
#grid(columns: 2, gutter: 10mm,
#grid(columns: 2, gutter: 6mm,
[
- FAIR queryable, linked metadata to facilitate further research
- automatic metadata sync. across omics
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#big_text[= Roadmap]
Development focused on internal deployment without access control so far.
Once the deployment is stable, we will focus on scaling the system and adding access control.
#figure(image("/assets/images/figures/roadmap.svg", width: 100%))
#figure(image("/assets/images/figures/roadmap.svg", width: 80%))
]

#normal-box()[
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#grid(columns: 2, rows: 2, row-gutter: 4mm, column-gutter: 2mm,
[#box(image("/assets/images/figures/qr-api.png", width: 1.5em)) #big_text[CLI]],
[#box(image("/assets/images/figures/qr-api.png", width: 1.5em)) #big_text[API]],
[#text(33pt)[```bash
[#text(23pt)[```bash
$ modos show --zarr s3://bucket/ex data
/
└── data
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$ modos stream s3://bucket/ex/demo1.cram
```]],
[#text(33pt)[```python
[#text(23pt)[```python
>>> from modos.api import MODO
>>> ex = MODO('s3://bucket/ex')
>>> ex.list_samples()
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MODOS is open-source!

We would love to have you try it out, and contributions are welcome.
#grid(columns: 2, gutter: 10mm,
#grid(columns: 2, gutter: 5mm,
[- Repository:], [github.com/sdsc-ordes/modos-api],
[- Documentation:], [sdsc-ordes.github.io/modos-api],
[- Data model:], [sdsc-ordes.github.io/modos-schema]
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#big_text[= Notes]
#zarr: a hierarchical format for the storage of chunked, compressed, N-dimensional arrays

#linkml: a general purpose modeling language that can be used with linked data, JSON, and other formalisms.
#linkml: a modeling language that can be used with linked data, JSON, and other formalisms.

#box(
width: 10cm,
width: 4.5cm,
image("/assets/images/logos/cc-by.svg"),
) This work is licensed under the #link("https://creativecommons.org/licenses/by/4.0")[Creative Commons Attribution 4.0 International License]
]
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