Merge pull request #7 from prescient-design/pypi

pypi

Author: kleinhenz

.github/workflows/push.yml

@@ -1,3 +1,5 @@
+on: "push"
+
 jobs:
   build:
     runs-on: "ubuntu-latest"
@@ -103,4 +105,3 @@ jobs:
           repository-url: "https://test.pypi.org/legacy/"
           skip-existing: true
           verbose: true
-on: "push"

.github/workflows/tag.yml

@@ -0,0 +1,28 @@
+name: tag
+on:
+  push:
+    tags:
+      - 'v[0-9]+.[0-9]+.[0-9]+'
+
+jobs:
+  pypi:
+    environment:
+      name: "test.pypi.org"
+      url: "https://test.pypi.org/project/lbster"
+    needs:
+      - "build"
+    permissions:
+      id-token: "write"
+    runs-on: "ubuntu-latest"
+    steps:
+      - uses: "actions/download-artifact@v4"
+        with:
+          name: "python-package-distributions"
+          path: "dist/"
+      - uses: "pypa/gh-action-pypi-publish@release/v1"
+        with:
+          user: __token__
+          password: ${{ secrets.TEST_PYPI_API_TOKEN }}
+          repository-url: "https://test.pypi.org/legacy/"
+          skip-existing: true
+          verbose: true

tests/lobster/model/test__lobsterfold.py

@@ -28,6 +28,8 @@ def structure_featurizer(scope="session"):
 
 @pytest.fixture
 def model(max_length, scope="session"):
+    if os.getenv("CI"):
+        pytest.skip("large download")
     return LobsterPLMFold(model_name="esmfold_v1", max_length=max_length)