Merge pull request #128 from oxford-pharmacoepi/teen_dev

Teen dev

Author: adelmestri

sql_scripts/1b_ukb_create.sql

@@ -1,13 +1,27 @@
 CREATE TABLE IF NOT EXISTS {SOURCE_SCHEMA}.baseline (
 	eid				bigint 		not null,	
-	"210222"		int,
-	"52"			smallint,
-	"34"			smallint,
-	"31"			smallint,
-	"21000"			int,
-	"26410"			NUMERIC,
-	"26427"			NUMERIC,
-	"26426"			NUMERIC
+	p31				smallint,
+	p34				smallint,
+	p52				smallint,
+	p53_i0			date,
+	p53_i1			date,
+	p53_i2			date,
+	p53_i3			date,
+	p54_i0			NUMERIC,
+	p54_i1			NUMERIC,
+	p54_i2			NUMERIC,
+	p54_i3			NUMERIC,
+	p200			date,
+	p20143			date,
+	p21000_i0		NUMERIC,
+	p21000_i1		NUMERIC,
+	p21000_i2		NUMERIC,
+	p21000_i3		NUMERIC,
+	p21022			int,
+	p22189			NUMERIC,
+	p26410			NUMERIC,
+	p26426			NUMERIC,
+	p26427			NUMERIC
 )TABLESPACE pg_default;
 
 CREATE TABLE IF NOT EXISTS {SOURCE_SCHEMA}.death (
@@ -204,176 +218,176 @@ CREATE TABLE IF NOT EXISTS {SOURCE_SCHEMA}.hesin_psych (
 
 CREATE TABLE IF NOT EXISTS {SOURCE_SCHEMA}.cancer (
 	eid				bigint 		not null,	
-	"40021.0"		varchar(4),
-	"40021.1"		varchar(4),
-	"40021.2"		varchar(4),
-	"40021.3"		varchar(4),
-	"40021.4"		varchar(4),
-	"40021.5"		varchar(4),
-	"40021.6"		varchar(4),
-	"40021.7"		varchar(4),
-	"40021.8"		varchar(4),
-	"40021.9"		varchar(4),
-	"40021.10"		varchar(4),
-	"40021.11"		varchar(4),
-	"40021.12"		varchar(4),
-	"40021.13"		varchar(4),
-	"40021.14"		varchar(4),
-	"40021.15"		varchar(4),
-	"40021.16"		varchar(4),
-	"40021.17"		varchar(4),
-	"40021.18"		varchar(4),
-	"40021.19"		varchar(4),
-	"40021.20"		varchar(4),
-	"40021.21"		varchar(4),
-	"40019.0"		smallint,
-	"40019.1"		smallint,
-	"40019.2"		smallint,
-	"40019.3"		smallint,
-	"40019.4"		smallint,
-	"40019.5"		smallint,
-	"40019.6"		smallint,
-	"40019.7"		smallint,
-	"40019.8"		smallint,
-	"40019.9"		smallint,
-	"40019.10"		smallint,
-	"40019.11"		smallint,
-	"40019.12"		smallint,
-	"40019.13"		smallint,
-	"40019.14"		smallint,
-	"40019.15"		smallint,
-	"40019.16"		smallint,
-	"40019.17"		smallint,
-	"40019.18"		smallint,
-	"40019.19"		smallint,
-	"40019.20"		smallint,
-	"40019.21"		smallint,
-	"40009.0"		integer,
-	"40005.0"		date,
-	"40005.1"		date,
-	"40005.2"		date,
-	"40005.3"		date,
-	"40005.4"		date,
-	"40005.5"		date,
-	"40005.6"		date,
-	"40005.7"		date,
-	"40005.8"		date,
-	"40005.9"		date,
-	"40005.10"		date,
-	"40005.11"		date,
-	"40005.12"		date,
-	"40005.13"		date,
-	"40005.14"		date,
-	"40005.15"		date,
-	"40005.16"		date,
-	"40005.17"		date,
-	"40005.18"		date,
-	"40005.19"		date,
-	"40005.20"		date,
-	"40005.21"		date,
-	"40008.0" 		NUMERIC,
-	"40008.1" 		NUMERIC,
-	"40008.2" 		NUMERIC,
-	"40008.3" 		NUMERIC,
-	"40008.4" 		NUMERIC,
-	"40008.5" 		NUMERIC,
-	"40008.6" 		NUMERIC,
-	"40008.7" 		NUMERIC,
-	"40008.8" 		NUMERIC,
-	"40008.9" 		NUMERIC,
-	"40008.10" 		NUMERIC,
-	"40008.11" 		NUMERIC,
-	"40008.12" 		NUMERIC,
-	"40008.13" 		NUMERIC,
-	"40008.14" 		NUMERIC,
-	"40008.15" 		NUMERIC,
-	"40008.16" 		NUMERIC,
-	"40008.17" 		NUMERIC,
-	"40008.18" 		NUMERIC,
-	"40008.19" 		NUMERIC,
-	"40008.20" 		NUMERIC,
-	"40008.21" 		NUMERIC,
-	"40006.0"		varchar(5),
-	"40006.1"		varchar(5),
-	"40006.2"		varchar(5),
-	"40006.3"		varchar(5),
-	"40006.4"		varchar(5),
-	"40006.5"		varchar(5),
-	"40006.6"		varchar(5),
-	"40006.7"		varchar(5),
-	"40006.8"		varchar(5),
-	"40006.9"		varchar(5),
-	"40006.10"		varchar(5),
-	"40006.11"		varchar(5),
-	"40006.12"		varchar(5),
-	"40006.13"		varchar(5),
-	"40006.14"		varchar(5),
-	"40006.15"		varchar(5),
-	"40006.16"		varchar(5),
-	"40006.17"		varchar(5),
-	"40006.18"		varchar(5),
-	"40006.19"		varchar(5),
-	"40006.20"		varchar(5),
-	"40006.21"		varchar(5),
-	"40013.0"		varchar(6),
-	"40013.1"		varchar(6),
-	"40013.2"		varchar(6),
-	"40013.3"		varchar(6),
-	"40013.4"		varchar(6),
-	"40013.5"		varchar(6),
-	"40013.6"		varchar(6),
-	"40013.7"		varchar(6),
-	"40013.8"		varchar(6),
-	"40013.9"		varchar(6),
-	"40013.10"		varchar(6),
-	"40013.11"		varchar(6),
-	"40013.12"		varchar(6),
-	"40013.13"		varchar(6),
-	"40013.14"		varchar(6),
-	"40011.0"		integer,
-	"40011.1"		integer,
-	"40011.2"		integer,
-	"40011.3"		integer,
-	"40011.4"		integer,
-	"40011.5"		integer,
-	"40011.6"		integer,
-	"40011.7"		integer,
-	"40011.8"		integer,
-	"40011.9"		integer,
-	"40011.10"		integer,
-	"40011.11"		integer,
-	"40011.12"		integer,
-	"40011.13"		integer,
-	"40011.14"		integer,
-	"40011.15"		integer,
-	"40011.16"		integer,
-	"40011.17"		integer,
-	"40011.18"		integer,
-	"40011.19"		integer,
-	"40011.20"		integer,
-	"40011.21"		integer,
-	"40012.0"		integer,
-	"40012.1"		integer,
-	"40012.2"		integer,
-	"40012.3"		integer,
-	"40012.4"		integer,
-	"40012.5"		integer,
-	"40012.6"		integer,
-	"40012.7"		integer,
-	"40012.8"		integer,
-	"40012.9"		integer,
-	"40012.10"		integer,
-	"40012.11"		integer,
-	"40012.12"		integer,
-	"40012.13"		integer,
-	"40012.14"		integer,
-	"40012.15"		integer,
-	"40012.16"		integer,
-	"40012.17"		integer,
-	"40012.18"		integer,
-	"40012.19"		integer,
-	"40012.20"		integer,
-	"40012.21"		integer	
+	p40005_i0		date,
+	p40005_i1		date,
+	p40005_i2		date,
+	p40005_i3		date,
+	p40005_i4		date,
+	p40005_i5		date,
+	p40005_i6		date,
+	p40005_i7		date,
+	p40005_i8		date,
+	p40005_i9		date,
+	p40005_i10		date,
+	p40005_i11		date,
+	p40005_i12		date,
+	p40005_i13		date,
+	p40005_i14		date,
+	p40005_i15		date,
+	p40005_i16		date,
+	p40005_i17		date,
+	p40005_i18		date,
+	p40005_i19		date,
+	p40005_i20		date,
+	p40005_i21		date,
+	p40006_i0		varchar(5),
+	p40006_i1		varchar(5),
+	p40006_i2		varchar(5),
+	p40006_i3		varchar(5),
+	p40006_i4		varchar(5),
+	p40006_i5		varchar(5),
+	p40006_i6		varchar(5),
+	p40006_i7		varchar(5),
+	p40006_i8		varchar(5),
+	p40006_i9		varchar(5),
+	p40006_i10		varchar(5),
+	p40006_i11		varchar(5),
+	p40006_i12		varchar(5),
+	p40006_i13		varchar(5),
+	p40006_i14		varchar(5),
+	p40006_i15		varchar(5),
+	p40006_i16		varchar(5),
+	p40006_i17		varchar(5),
+	p40006_i18		varchar(5),
+	p40006_i19		varchar(5),
+	p40006_i20		varchar(5),
+	p40006_i21		varchar(5),
+	p40008_i0		NUMERIC,
+	p40008_i1		NUMERIC,
+	p40008_i2		NUMERIC,
+	p40008_i3		NUMERIC,
+	p40008_i4		NUMERIC,
+	p40008_i5		NUMERIC,
+	p40008_i6		NUMERIC,
+	p40008_i7		NUMERIC,
+	p40008_i8		NUMERIC,
+	p40008_i9		NUMERIC,
+	p40008_i10		NUMERIC,
+	p40008_i11		NUMERIC,
+	p40008_i12		NUMERIC,
+	p40008_i13		NUMERIC,
+	p40008_i14		NUMERIC,
+	p40008_i15		NUMERIC,
+	p40008_i16		NUMERIC,
+	p40008_i17		NUMERIC,
+	p40008_i18		NUMERIC,
+	p40008_i19		NUMERIC,
+	p40008_i20		NUMERIC,
+	p40008_i21		NUMERIC,
+	p40009_i0		NUMERIC,
+	p40011_i0 		NUMERIC,
+	p40011_i1 		NUMERIC,
+	p40011_i2 		NUMERIC,
+	p40011_i3 		NUMERIC,
+	p40011_i4 		NUMERIC,
+	p40011_i5 		NUMERIC,
+	p40011_i6 		NUMERIC,
+	p40011_i7 		NUMERIC,
+	p40011_i8 		NUMERIC,
+	p40011_i9 		NUMERIC,
+	p40011_i10 		NUMERIC,
+	p40011_i11 		NUMERIC,
+	p40011_i12 		NUMERIC,
+	p40011_i13 		NUMERIC,
+	p40011_i14 		NUMERIC,
+	p40011_i15 		NUMERIC,
+	p40011_i16 		NUMERIC,
+	p40011_i17 		NUMERIC,
+	p40011_i18 		NUMERIC,
+	p40011_i19 		NUMERIC,
+	p40011_i20 		NUMERIC,
+	p40011_i21 		NUMERIC,
+	p40012_i0		NUMERIC,
+	p40012_i1		NUMERIC,
+	p40012_i2		NUMERIC,
+	p40012_i3		NUMERIC,
+	p40012_i4		NUMERIC,
+	p40012_i5		NUMERIC,
+	p40012_i6		NUMERIC,
+	p40012_i7		NUMERIC,
+	p40012_i8		NUMERIC,
+	p40012_i9		NUMERIC,
+	p40012_i10		NUMERIC,
+	p40012_i11		NUMERIC,
+	p40012_i12		NUMERIC,
+	p40012_i13		NUMERIC,
+	p40012_i14		NUMERIC,
+	p40012_i15		NUMERIC,
+	p40012_i16		NUMERIC,
+	p40012_i17		NUMERIC,
+	p40012_i18		NUMERIC,
+	p40012_i19		NUMERIC,
+	p40012_i20		NUMERIC,
+	p40012_i21		NUMERIC,
+	p40013_i0		varchar(6),
+	p40013_i1		varchar(6),
+	p40013_i2		varchar(6),
+	p40013_i3		varchar(6),
+	p40013_i4		varchar(6),
+	p40013_i5		varchar(6),
+	p40013_i6		varchar(6),
+	p40013_i7		varchar(6),
+	p40013_i8		varchar(6),
+	p40013_i9		varchar(6),
+	p40013_i10		varchar(6),
+	p40013_i11		varchar(6),
+	p40013_i12		varchar(6),
+	p40013_i13		varchar(6),
+	p40013_i14		varchar(6),
+	p40019_i0		NUMERIC,
+	p40019_i1		NUMERIC,
+	p40019_i2		NUMERIC,
+	p40019_i3		NUMERIC,
+	p40019_i4		NUMERIC,
+	p40019_i5		NUMERIC,
+	p40019_i6		NUMERIC,
+	p40019_i7		NUMERIC,
+	p40019_i8		NUMERIC,
+	p40019_i9		NUMERIC,
+	p40019_i10		NUMERIC,
+	p40019_i11		NUMERIC,
+	p40019_i12		NUMERIC,
+	p40019_i13		NUMERIC,
+	p40019_i14		NUMERIC,
+	p40019_i15		NUMERIC,
+	p40019_i16		NUMERIC,
+	p40019_i17		NUMERIC,
+	p40019_i18		NUMERIC,
+	p40019_i19		NUMERIC,
+	p40019_i20		NUMERIC,
+	p40019_i21		NUMERIC,
+	p40021_i0		varchar(4),
+	p40021_i1		varchar(4),
+	p40021_i2		varchar(4),
+	p40021_i3		varchar(4),
+	p40021_i4		varchar(4),
+	p40021_i5		varchar(4),
+	p40021_i6		varchar(4),
+	p40021_i7		varchar(4),
+	p40021_i8		varchar(4),
+	p40021_i9		varchar(4),
+	p40021_i10		varchar(4),
+	p40021_i11		varchar(4),
+	p40021_i12		varchar(4),
+	p40021_i13		varchar(4),
+	p40021_i14		varchar(4),
+	p40021_i15		varchar(4),
+	p40021_i16		varchar(4),
+	p40021_i17		varchar(4),
+	p40021_i18		varchar(4),
+	p40021_i19		varchar(4),
+	p40021_i20		varchar(4),
+	p40021_i21		varchar(4)
 )TABLESPACE pg_default;
 
 --CREATE TABLE IF NOT EXISTS {SOURCE_SCHEMA}.covid19_result_england(