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CMakeLists.txt
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#==============================================================================
#
# Top level CMakeLists.txt file for ParaDiGM
#
#==============================================================================
cmake_minimum_required(VERSION 3.16)
cmake_policy(VERSION 3.16)
#------------------------------------------------------------------------------
# Internal CMake module (shared with ParaDiGMA or CWIPI)
#------------------------------------------------------------------------------
set(PDM_CMAKE_DIR "${CMAKE_CURRENT_SOURCE_DIR}/cmake")
set(CMAKE_MODULE_PATH "${PDM_CMAKE_DIR}/modules")
include(${CMAKE_MODULE_PATH}/version.cmake)
project(PDM VERSION ${PDM_DEF_VERSION_MAJOR} LANGUAGES C CXX)
set(PDM_VERSION "${PDM_VERSION_MAJOR}.${PDM_VERSION_MINOR}.${PDM_VERSION_PATCH}")
set(CTEST_TEST_TIMEOUT 120)
# ----------------------------------------------------------------------
find_program( MEMORYCHECK_COMMAND valgrind )
set( MEMORYCHECK_COMMAND_OPTIONS "--trace-children=yes --leak-check=full" )
# ----------------------------------------------------------------------
include(CTest)
enable_testing ()
# ----------------------------------------------------------------------
# RPATH protection
#SET(CMAKE_SKIP_BUILD_RPATH TRUE)
#set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
#set(CMAKE_INSTALL_RPATH_USE_LINK_PATH FALSE)
set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
#------------------------------------------------------------------------------
# Fake dlclose path
#------------------------------------------------------------------------------
set(PDM_BINARY_DLCLOSE_DIR ${CMAKE_BINARY_DIR}/script/asan/fake_dlclose)
set(PDM_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR})
#------------------------------------------------------------------------------
# User option Definition
#------------------------------------------------------------------------------
# Multipart in Part
# -----------------
set(PDM_USE_MULTIPART 0)
# Extensions
# ----------
option(PDM_ENABLE_EXTENSION_PDMA "Enable advanced functionalities extension" OFF)
# OpenMP
# ------
option(PDM_ENABLE_OPENMP "Enable OpenMP" OFF)
# CUDA
# ------
option(PDM_ENABLE_CUDA "Enable CUDA" OFF)
if (PDM_ENABLE_CUDA)
enable_language(CUDA)
endif ()
# ANISO_AGGLO (only if pdma)
# ------
if (PDM_ENABLE_EXTENSION_PDMA)
option(PDM_ENABLE_ANISO_AGGLO "Enable Anisotropic agglomeration for coarse mesh function" ON)
if (PDM_ENABLE_ANISO_AGGLO)
if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 4.8)
message(FATAL_ERROR "Insufficient g++ version for Anisotropic agglomeration : set PDM_ENABLE_ANISO_AGGLO to OFF and re-run")
endif()
elseif (CMAKE_CXX_COMPILER_ID STREQUAL "Intel")
if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 15)
message(FATAL_ERROR "Insufficient icpc version for Anisotropic agglomeration : set PDM_ENABLE_ANISO_AGGLO to OFF and re-run")
endif()
elseif (CMAKE_CXX_COMPILER_ID STREQUAL "AppleClang")
if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 3.2)
message(FATAL_ERROR "Insufficient clang version for Anisotropic agglomeration : set PDM_ENABLE_ANISO_AGGLO to OFF and re-run")
endif()
elseif (CMAKE_CXX_COMPILER_ID MATCHES "XL")
if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 13.1.3)
message(FATAL_ERROR "Insufficient xlc++ version for Anisotropic agglomeration : set PDM_ENABLE_ANISO_AGGLO to OFF and re-run")
endif()
endif ()
set (PDM_HAVE_ANISO_AGGLO 1)
endif ()
endif()
# Enable long for absolute number
# -------------------------------
option(PDM_ENABLE_LONG_G_NUM "Enable long for global number" ON)
# Pt-scotch
# ---------
option(PDM_ENABLE_PTSCOTCH "Compile with support for SCOTCH." ON)
# ParMetis
# --------
option(PDM_ENABLE_PARMETIS "Compile with support for SCOTCH." ON)
# Shared libraries
# ----------------
option(PDM_ENABLE_SHARED "Build Shared Libraries" OFF)
# Static libraries
# ----------------
option(PDM_ENABLE_STATIC "Build Static Libraries" ON)
# Check MPI Wrapper
# -----------------
option(PDM_ENABLE_MPI_CHECK "Check MPI Wrapper" ON)
# Python Bindings
# ---------------
option(PDM_ENABLE_PYTHON_BINDINGS "Build Python module" OFF)
# BLAS/LAPACK
# -----------
option(PDM_ENABLE_BLASLAPACK "Build with BLAS/LAPACK" OFF)
# Fortran interface
# -----------------
option(PDM_ENABLE_Fortran "Build Fortran Interface" ON)
if (PDM_ENABLE_Fortran)
enable_language(Fortran)
endif()
if (PDM_ENABLE_STATIC AND PDM_ENABLE_Fortran)
set(PDM_ENABLE_STATIC_Fortran_INTERFACE ON)
else ()
set(PDM_ENABLE_STATIC_Fortran_INTERFACE OFF)
endif ()
if (PDM_ENABLE_SHARED AND PDM_ENABLE_Fortran)
set(PDM_ENABLE_SHARED_Fortran_INTERFACE ON)
else ()
set(PDM_ENABLE_SHARED_Fortran_INTERFACE OFF)
endif ()
option(PDM_ENABLE_Fortran_MPI_MODULE "Use Fortran MPI module" ON)
# Unit test mpi with doctect
# ------
option(PDM_ENABLE_UNIT_TEST "Enable unit test " OFF)
# Documentation
# -------------
option(PDM_ENABLE_DOC "Enable Sphinx documentation" OFF)
# Training Notebooks
# ------------------
option(PDM_ENABLE_TRAINING "Enable training Jupyter Notebooks" OFF)
#------------------------------------------------------------------------------
# Default build : Release
#------------------------------------------------------------------------------
if ((PDM_ENABLE_PYTHON_BINDINGS OR PDM_ENABLE_SHARED_Fortran_INTERFACE) AND (NOT PDM_ENABLE_SHARED))
set (PDM_ENABLE_SHARED "ON" CACHE STRING "Build Shared Libraries" FORCE )
endif()
if ((NOT PDM_ENABLE_STATIC) AND (NOT PDM_ENABLE_SHARED))
message (FATAL_ERROR "No enabled library. Please, enable shared or static library")
endif()
if (NOT CMAKE_BUILD_TYPE)
set(CMAKE_BUILD_TYPE "Release" CACHE STRING "Choose the type of build, options are: None(CMAKE_CXX_FLAGS or CMAKE_C_FLAGS used) Debug Release RelWithDebInfo MinSizeRel" FORCE)
endif()
# ADD "-DDEBUG_CLASSE" in Debug
#------------------------------
if (CMAKE_BUILD_TYPE STREQUAL "Debug")
add_definitions (-DDEBUG_CLASSE)
endif()
# Add "-DHAVE_GETRUSAGE" if function getrusage and gettimeofday exist
#--------------------------------------------------------------------
include(CheckFunctionExists)
CHECK_FUNCTION_EXISTS(getrusage PDM_HAVE_GETRUSAGE)
CHECK_FUNCTION_EXISTS(gettimeofday PDM_HAVE_GETTIMEOFDAY)
#------------------------------------------------------------------------------
# Default compiler flags
#------------------------------------------------------------------------------
include(${CMAKE_MODULE_PATH}/default_flags.cmake)
#------------------------------------------------------------------------------
# Libraries to add to link
#------------------------------------------------------------------------------
set(COMMON_LIBRARIES)
#------------------------------------------------------------------------------
# Check dependecies
#------------------------------------------------------------------------------
# Check MPI (TODO : check MPI wrapper function check )
# -------------
if (PDM_ENABLE_Fortran)
find_package(MPI REQUIRED COMPONENTS C Fortran)
else()
find_package(MPI REQUIRED COMPONENTS C)
endif()
if (PDM_ENABLE_Fortran_MPI_MODULE)
set(CMAKE_Fortran_PREPROCESS ON)
set (PDM_HAVE_FORTRAN_MPI_MODULE 1)
endif()
mark_as_advanced (MPI_EXTRA_LIBRARY MPI_LIBRARY)
# ---------------------
# Check MPI Wrapper
# ---------------------
if (PDM_ENABLE_MPI_CHECK)
include(${CMAKE_MODULE_PATH}/CheckMPI.cmake)
endif()
# Check SCOTCH an ParMETIS
# -------------------------
if (PDM_ENABLE_PARMETIS)
find_package(ParMETIS 4.0.3)
if (PARMETIS_FOUND)
set(PDM_HAVE_PARMETIS 1)
endif()
endif()
if (PDM_ENABLE_PTSCOTCH)
find_package(PTSCOTCH 6.0.0)
if (PTSCOTCH_FOUND)
set(PDM_HAVE_PTSCOTCH 1)
endif()
endif()
if (PDM_ENABLE_BLASLAPACK)
if (CMAKE_C_COMPILER_ID STREQUAL "Intel")
set (BLA_VENDOR "Intel10_64lp")
find_package(BLAS)
find_package(LAPACK)
if (BLAS_FOUND AND LAPACK_FOUND)
set(PDM_HAVE_MKL 1)
endif()
unset (BLA_VENDOR)
endif()
if (NOT BLAS_FOUND)
find_package(BLAS)
endif()
if (NOT LAPACK_FOUND)
find_package(LAPACK)
endif()
if (BLAS_FOUND)
set(PDM_HAVE_BLAS 1)
endif()
if (LAPACK_FOUND)
set(PDM_HAVE_LAPACK 1)
endif()
endif()
# find_package(mmg CONFIG)
# Check OpenMP (TODO : check MPI wrapper function check )
# -------------------------------------------------------
if (PDM_ENABLE_OPENMP)
find_package(OpenMP)
if (OPENMP_FOUND)
set(PDM_HAVE_OPENMP 1)
endif()
endif()
# Python bindings
# ---------------
if (PDM_ENABLE_PYTHON_BINDINGS)
# NB: cython module must use mpicxx to avoid "mpi.h" not found.
find_package(MPI REQUIRED COMPONENTS CXX)
find_package(Python REQUIRED COMPONENTS Interpreter Development NumPy)
find_package(Mpi4Py REQUIRED)
include(UseCython)
endif()
#------------------------------------------------------------------------------
# Store variable in configure file
#------------------------------------------------------------------------------
if (PDM_ENABLE_LONG_G_NUM)
set(PDM_LONG_G_NUM 1)
endif ()
configure_file(pdm_config.h.in "${CMAKE_CURRENT_BINARY_DIR}/pdm_config.h")
if (PDM_ENABLE_STATIC_Fortran_INTERFACE OR PDM_ENABLE_SHARED_Fortran_INTERFACE)
if ("${CMAKE_CURRENT_BINARY_DIR}/pdm_config.h" IS_NEWER_THAN "${CMAKE_CURRENT_BINARY_DIR}/pdm_configf.h")
include (FortranizeFile)
fortranize ("${CMAKE_CURRENT_BINARY_DIR}/pdm_config.h")
endif ()
endif ()
#------------------------------------------------------------------------------
# Doc
#------------------------------------------------------------------------------
find_package(Doxygen)
#------------------------------------------------------------------------------
# Print summary of found and not found optional packages
#------------------------------------------------------------------------------
include(FeatureSummary)
FEATURE_SUMMARY(WHAT ALL)
#------------------------------------------------------------------------------
# Installation de PDM
#------------------------------------------------------------------------------
# Append the library version information to the library target properties
if (PDM_WITH_LIBRARY_VERSION)
string(REPLACE "+" "" PDM_LIBRARY_VERSION ${PDM_VERSION})
# This setting of SOVERSION assumes that any API change
# will increment either the minor or major version number.
set(PDM_LIBRARY_PROPERTIES ${PDM_LIBRARY_PROPERTIES}
VERSION ${PDM_LIBRARY_VERSION}
SOVERSION ${PDM_VERSION_MAJOR}.${PDM_VERSION_MINOR}
)
endif()
# Set PDM install sub-directories
set(PDM_BIN_DIR "bin")
set(PDM_LIB_DIR "lib")
set(PDM_INCLUDE_DIR "include")
set(PDM_PKGCONFIG_DIR "lib/pkgconfig")
set(PDM_SHARE_DIR "share/cedre")
set(PDM_MAN_DIR "share/man")
set(PDM_DOC_DIR "${PDM_SHARE_DIR}/doc")
set(PDM_ETC_DIR "etc")
#------------------------------------------------------------------------------
# Ajout des sources de tous les elements du projet
# En fonction des top_targets a installer
#------------------------------------------------------------------------------
set(PDM_LIST_TEST "")
set(PDM_LIST_NRANK "")
add_subdirectory(script)
add_subdirectory(src)
option(PDM_ENABLE_TESTS "Enable tests" ON)
add_subdirectory(extensions)
if (PDM_ENABLE_PYTHON_BINDINGS)
add_subdirectory(Cython)
endif()
if (PDM_ENABLE_TESTS)
add_subdirectory(test)
endif()
add_subdirectory(doc)
if (PDM_ENABLE_TRAINING)
add_subdirectory(training)
endif()
#------------------------------------------------------------------------------
# Create PDM_run file
#------------------------------------------------------------------------------
string(REPLACE ";" " " PDM_LIST_TEST "${PDM_LIST_TEST}")
string(REPLACE ";" " " PDM_LIST_NRANK "${PDM_LIST_NRANK}")
set (PDM_RUN_PRELOAD "")
set (PDM_RUN_LSAN "")
set (PDM_RUN_PYTHONPATH "")
if (CMAKE_BUILD_TYPE STREQUAL "Sanitize")
execute_process(COMMAND gcc -print-file-name=libasan.so OUTPUT_VARIABLE PRELOAD_ASAN OUTPUT_STRIP_TRAILING_WHITESPACE)
set(PDM_RUN_PRELOAD "LD_PRELOAD ${PRELOAD_ASAN}:${PROJECT_BINARY_DIR}/script/asan/fake_dlclose/libdlclose.so")
set(PDM_RUN_PRELOAD_SRUN "LD_PRELOAD=${PRELOAD_ASAN}:${PROJECT_BINARY_DIR}/script/asan/fake_dlclose/libdlclose.so")
set(PDM_RUN_LSAN "LSAN_OPTIONS=suppressions=${PROJECT_SOURCE_DIR}/script/asan/asan.supp")
if (PDM_ENABLE_DOC)
message(FATAL_ERROR "Documention can not be built in Sanitize CMAKE_BUILD_TYPE")
endif ()
endif()
if(DEFINED ENV{PYTHONPATH})
set (PDM_RUN_PYTHONPATH "PYTHONPATH=${PROJECT_BINARY_DIR}/Cython:$ENV{PYTHONPATH}")
else()
set (PDM_RUN_PYTHONPATH "PYTHONPATH=${PROJECT_BINARY_DIR}/Cython")
endif()
configure_file(${PROJECT_SOURCE_DIR}/script/pdm_run.in "${PROJECT_BINARY_DIR}/pdm_run"
@ONLY)
#
# Voir comment mieux faire !
configure_file(${PROJECT_SOURCE_DIR}/script/pdm_run.in "${PROJECT_BINARY_DIR}/test/pdm_run"
@ONLY)
if(PDM_ENABLE_EXTENSION_PDMA)
configure_file(${PROJECT_SOURCE_DIR}/script/pdm_run.in "${PROJECT_BINARY_DIR}/extensions/paradigma/test/pdm_run"
@ONLY)
endif()
configure_file(${PROJECT_SOURCE_DIR}/script/pdm_launch.in "${PROJECT_BINARY_DIR}/pdm_launch"
@ONLY)
configure_file(${PROJECT_SOURCE_DIR}/script/pdm_launch_python.in "${PROJECT_BINARY_DIR}/pdm_launch_python"
@ONLY)
#------------------------------------------------------------------------------
if(PDM_ENABLE_UNIT_TEST)
include(FetchContent)
FetchContent_Declare(
doctest
GIT_REPOSITORY https://github.com/doctest/doctest.git
GIT_TAG v2.4.11
)
# FetchContent_Declare(
# doctest
# GIT_REPOSITORY https://github.com/BerengerBerthoul/doctest.git
# GIT_TAG f13a00607463ce211004be23b5aa0bdf24d3ab61
# )
FetchContent_GetProperties(doctest)
if(NOT doctest_POPULATED)
FetchContent_Populate(doctest)
add_subdirectory(${doctest_SOURCE_DIR} ${doctest_BINARY_DIR})
endif()
endif()
#------------------------------------------------------------------------------
#------------------------------------------------------------------------------
# Création d'un package pdmConfig.cmake pour importer facilement paradigm
# pour les clients utilisant CMake
#------------------------------------------------------------------------------
configure_file(
"${CMAKE_CURRENT_SOURCE_DIR}/cmake/templates/pdmConfig.cmake.in"
pdmConfig.cmake
@ONLY
)
install(FILES "${CMAKE_CURRENT_BINARY_DIR}/pdmConfig.cmake"
DESTINATION lib/cmake/pdm
)
configure_file(
"${CMAKE_CURRENT_SOURCE_DIR}/cmake/templates/pdmConfigVersion.cmake.in"
pdmConfigVersion.cmake
@ONLY
)
install(FILES "${CMAKE_CURRENT_BINARY_DIR}/pdmConfigVersion.cmake"
DESTINATION lib/cmake/pdm
)
#------------------------------------------------------------------------------
# Affichage du message de fin d'installation
#------------------------------------------------------------------------------
add_subdirectory(${PDM_CMAKE_DIR}/post-install)