Merge pull request #109 from MariekeVromman/ciriquant_bug

Resolving tiny ciriquant bug
nf-core · Apr 15, 2024 · d4199c4 · d4199c4
2 parents 84eb20b + cf0a055
commit d4199c4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/ciriquant/yml/main.nf b/modules/local/ciriquant/yml/main.nf
@@ -19,7 +19,7 @@ process CIRIQUANT_YML {
     task.ext.when == null || task.ext.when
 
     script:
-    hisat2_prefix = meta2.id
+    hisat2_prefix = fasta.baseName
     fasta_path = fasta.toRealPath()
     gtf_path = gtf.toRealPath()
     bwa_path = bwa.toRealPath()