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Copy pathcolumns_linked_to_hpo_actin.py
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columns_linked_to_hpo_actin.py
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column_to_hpo = {'high frequency hearing loss' : 'HP:0005101','microcephaly' : 'HP:0000252','short stature' : 'HP:0003498','wide nasal bridge' : 'HP:0000431','hearing loss' : 'HP:0000365','id' : 'HP:0002721','developmental delay (global)' : 'HP:0001263','motor delay' : 'HP:0001270','speech delay' : 'HP:0000750','seizures' : 'HP:0001250','trigonocephaly' : 'HP:0000243','coloboma': 'HP:0000589','hypertelorism': 'HP:0000316','high arched eyebrows': 'HP:0002553','hypertrichosis': 'HP:0000998','congenital ptosis': 'HP:0007911','epicanthus': 'HP:0000286','telecanthus': 'HP:0000506','pachygyria': 'HP:0001302','other brain mri abnormalities (i.e. brain atrophy, corpus callosum agenesis, hydrocephalus, white matter leasions, periventricular nodular heterotopias).' : ['HP:0002283', 'HP:0001274', 'HP:0000238', 'HP:0007042', 'HP:0032388'],'long eyelashes' : 'HP:0000527','deeply set eyes' : 'HP:0000490','broad/wide nasal bridge/ tip' : 'HP:0000431','bulbous nose' : 'HP:0000414','failure to thrive' : 'HP:0001508','feeding difficulties' : 'HP:0008872','prominent eyes/proptosis' : 'HP:0000520','down slanting eyebrows': 'HP:0002553','midface hypoplasia' : 'HP:0011800' ,'low set ears' : 'HP:0000369','dysplastic ears' : 'HP:0000377','small ears with overfolded helices/prominent helix' : ['HP:0008551', 'HP:0000396', 'HP:0009904'],'long philtrum' : 'HP:0000343','smooth philtrum' : 'HP:0000319','thin lips' : 'HP:0000219','pointed/small chin' : 'HP:0000307','pterygium colli/webbed neck' : 'HP:0000465','retrognathia/micrognathia' : ['HP:0000278', 'HP:0000347'],'kypho/scoliotic posture' : 'HP:0002751','joint laxity' : 'HP:0001388','clinodactyly' : 'HP:0030084','tapering digits': ['HP:0006224', 'HP:0011309', 'HP:0001182'],'hernia' : 'HP:0100790','high palate' : 'HP:0000218','cleft lip' : 'HP:0000161','cleft palate' : 'HP:0000175','transverse right palmar crease/deep oakmar creases' : ['HP:0010490', 'HP:0000954'],'pectus excavatum/pectus deformity' : ['HP:0000767', 'HP:0000766'],'radial abnormalities (fingers/toes)' : ['HP:0009485', 'HP:0011297'],'hypotonia' : 'HP:0001290','dystonia' : 'HP:0001332','frontal bossing' : 'HP:0002007','scaphocephaly' : 'HP:0030799','bitemporal narrowing' : 'HP:0000341','prominence of metopic suture/ridge' : 'HP:0005487','large anterior fontanelle' : 'HP:0000260','high anterior hairline' : 'HP:0009890','low anterior hairline' : 'HP:0000294','low posterior hairline' : 'HP:0002162','sparse eyebrows' : 'HP:0000535','flaired and straight eyebrows' : 'HP:0011228','synophris' : 'HP:0000664','upslanting/long palpebral fissures' : 'HP:0000637','heart defects (other then asd, vsd or pda)' : 'HP:0001627','asd' : 'HP:0000729','vsd' : 'HP:0001629','cardiomegaly' : 'HP:0001640','large squared nose tip': 'HP:0005274','upturned nose' : 'HP:0000455','prominent nasal root on profile' : 'HP:0000426','thin upper lip' : 'HP:0000219','large/wide mouth' : 'HP:0000154','tented upper lip with downturned corners' : ['HP:0010804', 'HP:0002714'],'thick/prominent/everted lower lip' : 'HP:0000232','prominent cheeks': 'HP:0000293','autism spectrum disorder' : 'HP:0000729','adhd/add': 'HP:0007018','other psychiatric diagnosis (schizophrenia, depression, other, not autism, or adhd/add)': ['HP:0000716', 'HP:0100753'],'behavioral abnormalities (tantrums, auto mutulation)' : 'HP:0000708','horseshoe kidney' : 'HP:0000085','renal cysts' : 'HP:0000107','other renal abnormality' : 'HP:0012211','cryptorchidism' : 'HP:0000028','recurrent infections' : 'HP:0001581','photosensitivity' : 'HP:0000992','hepatomegaly' : 'HP:0002240','hypothyroidism' : 'HP:0000821','leukocytosis' : 'HP:0001974','thrombocytopenia' : 'HP:0001873','asthma' : 'HP:0002099','strabismus' : 'HP:0000486','growth hormone deficiency' : 'HP:0000824'}