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cov_comp_25.sql
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-- phpMyAdmin SQL Dump
-- version 5.1.1
-- https://www.phpmyadmin.net/
--
-- Host: 127.0.0.1
-- Generation Time: Aug 25, 2022 at 11:28 PM
-- Server version: 10.4.22-MariaDB
-- PHP Version: 7.4.26
SET SQL_MODE = "NO_AUTO_VALUE_ON_ZERO";
START TRANSACTION;
SET time_zone = "+00:00";
/*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
/*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
/*!40101 SET @OLD_COLLATION_CONNECTION=@@COLLATION_CONNECTION */;
/*!40101 SET NAMES utf8mb4 */;
--
-- Database: `web_app`
--
-- --------------------------------------------------------
--
-- Table structure for table `cov_comp`
--
CREATE TABLE `cov_comp` (
`gene` varchar(55) DEFAULT NULL,
`feature` varchar(55) DEFAULT NULL,
`domainNameCov2` varchar(55) DEFAULT NULL,
`domainNameCov` varchar(55) DEFAULT NULL,
`cov2AAStartEnd` varchar(55) DEFAULT NULL,
`cov2Start` varchar(55) DEFAULT NULL,
`cov2End` varchar(55) DEFAULT NULL,
`covAAStartEnd` varchar(55) DEFAULT NULL,
`covStart` varchar(55) DEFAULT NULL,
`covEnd` varchar(55) DEFAULT NULL,
`identities` varchar(55) DEFAULT NULL,
`positives` varchar(55) DEFAULT NULL,
`gaps` varchar(55) DEFAULT NULL,
`Publication` varchar(50) NOT NULL,
`Publicationcov` varchar(100) NOT NULL,
`dashRange` varchar(11) NOT NULL,
`dashRange2` varchar(11) NOT NULL
) ENGINE=InnoDB DEFAULT CHARSET=utf8mb4;
--
-- Dumping data for table `cov_comp`
--
INSERT INTO `cov_comp` (`gene`, `feature`, `domainNameCov2`, `domainNameCov`, `cov2AAStartEnd`, `cov2Start`, `cov2End`, `covAAStartEnd`, `covStart`, `covEnd`, `identities`, `positives`, `gaps`, `Publication`, `Publicationcov`, `dashRange`, `dashRange2`) VALUES
('nsp1', 'Domain', 'N-Terminal', 'N-Terminal', '1-12', '266', '301', '1-12', '245', '281', '10/12(83%)', '10/12(83%)', '0/12(0%)', 'doi.org/10.1038/s41594-020-0511-8', 'https://doi.org/10.1016/j.isci.2020.101903', '1-12', '1-12'),
('nsp1', 'Domain', 'Globular domain', 'Globular domain', '13-127', '303', '645', '13-127', '284', '626', '99/115(86%)', '107/115(93%)', '0/115(0%)', 'doi.org/10.1038/s41594-020-0511-8', 'https://doi.org/10.1016/j.isci.2020.101903', '13-127', '13-127'),
('nsp1', 'Domain', 'Linker', 'Linker', '129-147', '650', '701', '129-147', '632', '686', '17/19(89%)', '18/19(94%)', '0/19(0%)', 'doi.org/10.1038/s41594-020-0511-8', 'https://doi.org/10.1016/j.isci.2020.101903', '129-147', '129-147'),
('nsp1', 'Domain', 'C-terminal', 'C-terminal', '148-180', '710', '805', '148-180', '689', '785', '25/33(76%)', '28/33(84%)', '0/33(0%', 'doi.org/10.1038/s41594-020-0511-8', 'https://doi.org/10.1016/j.isci.2020.101903', '148-180', '148-180'),
('nsp2', 'Domain', 'Domain 1', '', '1-277', '809', '1637', '1-277', '788', '1616', '213/277(77%)', '240/277(86%)', '0/277(0%)', 'doi.org/10.1101/2021.05.10.443524', '', '1-277', '1-277'),
('nsp2', 'Domain', 'Domain 2', '', '278-344', '1640', '1838', '278-344', '1619', '1817', '55/67(82%)', '62/67(92%)', '0/67(0%)', 'doi.org/10.1101/2021.05.10.443524', '', '278-344', '278-344'),
('nsp2', 'Domain', 'Domain 3', '', '459-509', '2183', '2333', '459-509', '2162', '2312', '25/51(49%)', '34/51(66%)', '0/51(0%)', 'doi.org/10.1101/2021.05.10.443524', '', '459-509', '459-509'),
('nsp2', 'Domain', 'Domain 4', '', '510-638', '2336', '2720', '510-638', '2315', '2699', '76/128(59%)', '98/128(76%)', '0/128(0%)', 'doi.org/10.1101/2021.05.10.443524', '', '510-638', '510-638'),
('nsp3', 'Domain', 'Ubiquitin-like domain 1 (Ubl1)', 'Ubiquitin-like domain 1 (Ubl1)', '1-111', '2723', '3053', '1-112', '2702', '3035', '85/107(79%)', '97/107(90%)', '0/107(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1-112', '1-112'),
('nsp3', 'Domain', 'Hyper-Variable or Glu-acidic rich domain', 'Hyper-Variable or Glu-acidic rich domain', '128-169', '3104', '3227', '113-183', '3038', '3248', '27/42(64%)', '37/42(88%)', '0/42(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '113-204', '130-171'),
('nsp3', 'Domain', 'Macro 1', 'Macro 1', '206-375', '3338', '3845', '184-365', '3251', '3794', '124/168(74%)', '143/168(85%)', '0/168(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '208-390', '208-377'),
('nsp3', 'Domain', 'Macro 2', 'Macro 2', '415-540', '3965', '4340', '389-524', '3866', '4271', '91/128(71%)', '109/128(85%)', '0/128(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '416-551', '418-543'),
('nsp3', 'Domain', 'Macro 3', 'Macro 3', '548-675', '4364', '4745', '525-652', '4274', '4655', '105/128(82%)', '115/128(89%)', '0/128(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '552-679', '551-678'),
('nsp3', 'Domain', 'DPUP', 'DPUP', '677-742', '4751', '4946', '653-720', '4658', '4859', '48/67(72%)', '58/67(86%)', '1/67(1%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '680-747', '680-746'),
('nsp3', 'Domain', 'Ubiquitin-like domain 2 (Ubl2)', 'Ubiquitin-like domain 2 (Ubl2)', '746-801', '4958', '5123', '723-782', '4868', '5045', '50/56(89%)', '54/56(96%)', '0/56(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '750-809', '750-805'),
('nsp3', 'Domain', 'Papin like protease 2 (PLpro2)', 'Papin like protease 2 (PLpro2)', '806-1087', '5093', '5941', '783-1065', '5048', '5894', '231/283(82%)', '254/283(89%)', '0/283(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '810-1092', '810-1091'),
('nsp3', 'Domain', 'Nucleic Acid binding domain', 'Nucleic Acid binding domain', '1092-1202', '5996', '6326', '1066-1180', '5897', '6239', '91/111(82%)', '99/111(89%)', '0/111(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1093-1207', '1096-1206'),
('nsp3', 'Domain', 'Beta Specific Marker domain', 'Beta Specific Marker domain', '1227-1414', '6401', '6962', '1203-1318', '6308', '6653', '78/115(68%)', '98/115(85%)', '0/115(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1230-1345', '1231-1418'),
('nsp3', 'Domain', 'Transmembrane Domain 1', 'Transmembrane Domain 1', '1415-1437', '6965', '7031', '1391-1413', '6872', '6938', '17/23(74%)', '19/23(82%)', '0/23(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1418-1440', '1419-1441'),
('nsp3', 'Domain', '3 Ecto or Zinc finger domain', '3 Ecto or Zinc finger domain', '1438-1519', '7034', '7277', '1414-1495', '6941', '7184', '59/82(72%)', '68/82(82%)', '0/82(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1441-1522', '1442-1523'),
('nsp3', 'Domain', 'Transmembrane Domain 2', 'Transmembrane Domain 2', '1520-1546', '7280', '7358', '1496-1518', '7187', '7253', '19/23(83%)', '22/23(95%)', '0/23(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1523-1545', '1524-1550'),
('nsp3', 'Domain', 'Amphiatic Helix domain 1', 'Amphiatic Helix domain 1', '1547-1568', '7361', '7424', '1523-1545', '7268', '7334', '20/23(87%)', '22/23(95%)', '0/23(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1550-1572', '1551-1572'),
('nsp3', 'Domain', 'Y1 and Cov-Y domain', 'Y1 and Cov-Y domain', '1570-1945', '7430', '8554', '1546-1922', '7337', '8465', '334/377(89%)', '366/377(97%)', '0/377(0%)', 'doi.org/10.1016/j.antiviral.2017.11.001', 'doi.org/10.1016/j.antiviral.2017.11.001', '1573-1949', '1574-1949'),
('nsp4', 'Domain', 'Transmembrane Domain 1', '', '13-35', '8591', '8660', '14-36', '8504', '8570', '5/10(50%)', '7/10(70%)', '0/10(0%)', 'https://doi.org/10.1016%2Fj.virol.2017.07.019', 'https://doi.org/10.1128/mBio.00524-13', '14-36', '13-35'),
('nsp4', 'Domain', 'Transmembrane Domain 2', '', '280-302', '9392', '9458', '280-301', '9302', '9365', '18/23(78%)', '21/23(91%)', '0/23(0%)', 'https://doi.org/10.1016%2Fj.virol.2017.07.019', 'https://doi.org/10.1128/mBio.00524-13', '280-301', '280-302'),
('nsp4', 'Domain', 'Transmembrane Domain 3', '', '315-337', '9497', '9563', '316-337', '9410', '9473', '18/23(78%)', '19/23(82%)', '0/23(0%)', 'https://doi.org/10.1016%2Fj.virol.2017.07.019', 'https://doi.org/10.1128/mBio.00524-13', '316-337', '315-337'),
('nsp4', 'Domain', 'Transmembrane Domain 4', '', '365-387', '9647', '9713', '364-386', '9554', '9620', '14/22(64%)', '15/22(68%)', '0/22(0%)', 'https://doi.org/10.1016%2Fj.virol.2017.07.019', 'https://doi.org/10.1128/mBio.00524-13', '364-386', '365-387'),
('nsp5', 'Domain', 'Domain 1', '', '8-99', '10076', '10349', '8-99', '9986', '10259', '85/91(93%)', '90/91(98%)', '0/91(0%)', 'https://doi.org/10.1126/science.1085658', 'https://doi.org/10.1099/jgv.0.001558', '8-99', '11-102'),
('nsp5', 'Domain', 'Domain 2', '', '100-183', '10352', '10601', '100-183', '10262', '10511', '82/84(98%)', '82/84(97%)', '0/84(0%)', 'https://doi.org/10.1126/science.1085658', 'https://doi.org/10.1099/jgv.0.001558', '100-183', '103-186'),
('nsp5', 'Domain', 'C-terminal proteolytic domain', '', '200-300', '10652', '10952', '200-300', '10562', '10862', '97/101(96%)', '100/101(99%)', '0/101(0%)', 'https://doi.org/10.1126/science.1085658', 'https://doi.org/10.1099/jgv.0.001558', '200-300', '200-300'),
('nsp6', 'Domain', 'Transmembrane 1', '', '18-60', '11024', '11150', '18-60', '10937', '11063', '32/42(76%)', '39/42(92%)', '0/42(0%)', 'http://dx.doi.org/10.1089/cmb.2020.0627', 'http://dx.doi.org/10.1089/cmb.2020.0627', '18-60', '18-60'),
('nsp6', 'Domain', 'Transmembrane 2', '', '66-86', '11168', '11228', '66-86', '11081', '11141', '21/21(100%)', '21/21(100%)', '0/21(0%)', 'http://dx.doi.org/10.1089/cmb.2020.0627', 'http://dx.doi.org/10.1089/cmb.2020.0627', '66-86', '66-86'),
('nsp6', 'Domain', 'Transmembrane 3', '', '105-125', '11285', '11345', '105-125', '11198', '11258', '18/21(86%)', '19/21(90%)', '0/21(0%)', 'http://dx.doi.org/10.1089/cmb.2020.0627', 'http://dx.doi.org/10.1089/cmb.2020.0627', '105-125', '105-125'),
('nsp6', 'Domain', 'Transmembrane 4', '', '161-181', '11453', '11513', '161-181', '11366', '11426', '20/21(95%)', '21/21(100%)', '0/21(0%)', 'http://dx.doi.org/10.1089/cmb.2020.0627', 'http://dx.doi.org/10.1089/cmb.2020.0627', '161-181', '161-181'),
('nsp6', 'Domain', 'Transmembrane 5', '', '210-230', '11600', '11660', '210-230', '11513', '11573', '19/21(90%)', '19/21(90%)', '0/21(0%)', 'http://dx.doi.org/10.1089/cmb.2020.0627', 'http://dx.doi.org/10.1089/cmb.2020.0627', '210-230', '210-230'),
('nsp8', 'Domain', 'Extension', 'Extension', '1-97', '12095', '12383', '6-104', '12017', '12311', '91/92(99%)', '92/92(100%)', '0/92(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '6-104', '1-97'),
('nsp8', 'Domain', 'Head', 'Head', '98-198', '12386', '12686', '105-196', '12314', '12587', '88/92(96%)', '89/92(96%)', '0/92(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '105-196', '98-198'),
('nsp9', 'Domain', 'N-terminal', 'N-terminal', '1-9', '12689', '12713', '1-9', '12596', '12623', '9/9(100%)', '9/9(100%)', '0/9(0%)', 'doi.org/10.1186/s43556-020-00005-0', 'doi.org/10.1186/s43556-020-00005-0', '1-9', '1-9'),
('nsp9', 'Domain', 'C-terminal', 'C-terminal', '96-113', '12974', '13025', '96-113', '12884', '12935', '18/18(100%)', '18/18(100%)', '0/18(0%)', '10.1186/s43556-020-00005-0', 'doi.org/10.1186/s43556-020-00005-0', '96-113', '96-113'),
('nsp10', 'Domain', 'core interaction domain', 'core interaction domain', '68-96', '13226', '13310', '65-107', '13130', '13256', '29/29(100%)', '29/29(100%)', '0/29(0%)', 'https://doi.org/10.1093/nar/gkab320', 'https://doi.org/10.1128/JVI.00467-06', '65-107', '68-96'),
('nsp11', 'full sequence', '', '', '1-13', '13445', '13481', '1-13', '13442', '13480', '11/13(85%)', '11/13(84%)', '0/13(0%)', 'www.ncbi.nlm.nih.gov/nuccore/NC_045512', '', '1-13', '1-13'),
('nsp12', 'Domain', 'NiRAN', 'NiRAN', '1-249', '13442', '14186', '1-397', '13352', '14543', '126/133(95%)', '129/133(96%)', '0/133(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '1-397', '1-249'),
('nsp12', 'Domain', 'Fingers', 'Fingers', '398-580', '14636', '15182', '398-581', '14543', '15092', '184/184(100%)', '184/184(100%)', '0/184(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '398-581', '398-580'),
('nsp12', 'Domain', 'Fingers', 'Fingers', '627-686', '15323', '15500', '628-687', '15233', '15410', '57/59(97%)', '58/59(98%)', '0/59(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '628-687', '627-686'),
('nsp12', 'Domain', 'Palm', 'Palm', '581-626', '15185', '15320', '582-627', '15095', '15230', '44/45(98%)', '44/45(97%)', '0/45(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '582-627', '581-626'),
('nsp12', 'Domain', 'Palm', 'Palm', '687-811', '15503', '15875', '688-815', '15413', '15794', '117/124(94%)', '122/124(98%)', '0/124(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '688-815', '687-811'),
('nsp12', 'Domain', 'Thumb', 'Thumb', '812-931', '15878', '16235', '816-919', '15797', '16106', '104/104(100%)', '104/104(100%)', '0/104(0%)', 'doi.org/10.1016/j.cell.2020.07.033', '10.1038/s41467-019-10280-3', '816-919', '812-931'),
('nsp13', 'Domain', 'N-terminal zinc-binding domain (ZBD)', 'Zinc-Binding Domain', '1-99', '16240', '16534', '1-99', '16147', '16441', '99/99(100%)', '99/99(100%)', '0/99(0%)', '10.1016/j.cell.2020.07.033 ', 'https://doi.org/10.1093/nar/gkz409', '1-99', '1-99'),
('nsp13', 'Domain', 'Stalk', 'Spike', '100-148', '16537', '16681', '100-149', '16444', '16591', '49/49(100%)', '49/49(100%)', '0/49(0%)', '10.1016/j.cell.2020.07.033 ', 'https://doi.org/10.1093/nar/gkz410', '100-149', '100-148'),
('nsp13', 'Domain', '1B', '1B', '149-228', '16684', '16921', '150-260', '16594', '16924', '79/79(100%)', '79/79(100%)', '0/79(0%)', '10.1016/j.cell.2020.07.033 ', 'https://doi.org/10.1093/nar/gkz411', '150-260', '149-228'),
('nsp13', 'Domain', 'RecA1', 'A1', '234-438', '16939', '17551', '261-441', '16927', '17467', '178/178(100%)', '178/178(100%)', '0/178(0%)', '10.1016/j.cell.2020.07.033 ', 'https://doi.org/10.1093/nar/gkz412', '261-441', '234-438'),
('nsp13', 'Domain', 'RecA2', 'A2', '439-601', '17554', '18040', '442-596', '17470', '17932', '154/155(99%)', '155/155(100%)', '0/155(0%)', '10.1016/j.cell.2020.07.033 ', 'https://doi.org/10.1093/nar/gkz413', '442-596', '439-601'),
('nsp14', 'Domain', 'ExoN', 'ExoN', '1-287', '18043', '18901', '1-287', '17953', '18811', '273/287(95%)', '283/287(98%)', '0/287(0%)', 'https://doi.org/10.1016/j.genrep.2020.100860', 'https://doi.org/10.1073/pnas.1508686112', '1-287', '1-287'),
('nsp14', 'Domain', 'N7-MTase', 'N7-MTase', '288-527', '18904', '19621', '288-527', '18814', '19531', '228/240(95%)', '237/240(98%)', '0/240(0%)', 'https://doi.org/10.1016/j.genrep.2020.100860', 'https://doi.org/10.1073/pnas.1508686112', '288-527', '288-527'),
('nsp15', 'Domain', 'N-terminal domain', 'N-terminal domain', '1-62', '19624', '19807', '1-62', '19534', '19717', '55/62(89%)', '58/62(93%)', '0/62(0%)', 'doi.org/10.1080/07391102.2020.1814870', 'https://doi.org/10.1073/pnas.0601708103', '1-62', '1-62'),
('nsp15', 'Domain', 'Central domain', 'Central domain', '63-191', '19810', '20194', '63-191', '19720', '20104', '111/129(86%)', '123/129(95%)', '0/129(0%', 'doi.org/10.1080/07391102.2020.1814870', 'https://doi.org/10.1073/pnas.0601708103', '63-191', '63-191'),
('nsp15', 'Domain', 'Catalytic C terminal domain', 'C-terminal catalytic (NendoU) domain', '192-345', '20197', '20656', '192-345', '20107', '20566', '140/154(91%)', '149/154(96%)', '0/154(0%)', 'doi.org/10.1080/07391102.2020.1814870', 'https://doi.org/10.1073/pnas.0601708103', '192-345', '192-345'),
('nsp16', 'Domain', 'Conserved Cryptic Pocket', 'Conserved Cryptic Pocket', '79-99', '20899', '20959', '79-99', '20809', '20869', '21/21(100%)', '21/21(100%)', '0/21(0%)', 'https://doi.org/10.1101/2020.12.10.420109', 'https://doi.org/10.1101/2020.12.10.420109', '79-99', '79-99'),
('S', 'Domain', 'N-terminal', 'N-trminal(NTD)', '14-305', '21602', '22475', '14-292', '21511', '22345', '149/282(53%)', '205/282(72%)', '19/282(6%)', 'doi.org/10.1039/D0CC03263H', '10.1016/j.tim.2015.06.003', '14-309', '15-309'),
('S', 'Domain', 'Receptor Binding domain', 'Receptor Binding domain', '319-541', '22517', '23183', '306-527', '22387', '23050', '163/223(73%)', '183/223(82%)', '1/223(0%)', 'doi.org/10.1039/D0CC03263H', '10.1016/j.tim.2015.06.003', '323-545', '323-545'),
('S', 'Domain', 'Upstream Helix (UH)', 'UH', '705-771', '23675', '23873', '729-765', '23656', '23764', '23/25(92%)', '25/25(100%)', '0/25(0%)', 'doi.org/10.1038/s41392-020-00369-3', 'https://doi.org/10.1038/ncomms15092', '751-787', '709-775'),
('S', 'Region', 'Region containing Fusion Peptide (FP)', 'region containing Fusion peptide (FP)', '788-806', '23924', '23978', '770-788', '23779', '23833', '15/19(79%)', '17/19(89%)', '0/19(0%)', 'doi.org/10.1038/s41392-020-00369-3', '10.1016/j.tim.2015.06.003', '792-810', '792-810'),
('S', 'Motif', 'Heptad Repeat 1 (HR1)', 'Heptad Repeat 1 (HR1)', '912-984', '24296', '24512', '900-966', '24169', '24367', '58/67(87%)', '64/67(95%)', '0/67(0%)', 'doi.org/10.1038/s41392-020-00369-3', '10.1016/j.tim.2015.06.003', '922-988', '916-988'),
('S', 'Motif', 'Central Helix (CH)', 'Central Helix (CH)', '983-1028', '24509', '24644', '967-1016', '24370', '24517', '44/44(100%)', '44/44(100%)', '0/44(0%)', 'doi.org/10.1038/s41392-020-00369-3', 'https://doi.org/10.1038/ncomms15092', '989-1038', '989-1032'),
('S', 'Region', 'Beta-hairpin region (BH)', 'Beta-hairpin region (BH)', '1029-1120', '24647', '24920', '1017-1053', '24520', '24628', '35/37(95%)', '35/37(94%)', '0/37(0%)', 'doi.org/10.1038/s41392-020-00369-3', 'https://doi.org/10.1038/ncomms15092', '1039-1075', '1033-1124'),
('S', 'Domain', 'Connector Domain (CD)', '?', '1121-1146', '24923', '24998', '1103-1128', '24778', '24907', '25/26(96%)', '26/26(100%)', '0/26(0%)', 'doi.org/10.1038/s41392-020-00369-3', 'doi.org/10.1038/s41392-020-00369-3', '1125-1148', '1125-1150'),
('S', 'Motif', 'Heptad Repeat 2 (HR2)', 'Heptad Repeat 2 (HR2)', '1163-1213', '25049', '25199', '1145-1184', '24904', '25021', '40/40(100%)', '40/40(100%)', '0/40(0%)', 'https://doi.org/10.1038/s41401-020-0485-4', '10.1016/j.tim.2015.06.003', '1167-1206', '1167-1217'),
('S', 'Domain', 'Transmembrane Domain (TM)', 'Transmembrane Domain (TM)', '1213-1237', '25199', '25271', '1203-1218', '25078', '25123', '15/16(94%)', '16/16(100%)', '0/16(0%)', 'https://doi.org/10.1038/s41401-020-0485-4', '10.1016/j.tim.2015.06.003', '1225-1240', '1218-1240'),
('S', 'Domain', 'Cytoplasmic Domain', 'Cytoplasmic Domain', '1237-1273', '25271', '25379', '1219-1255', '25126', '25234', '36/37(97%)', '36/37(97%)', '0/37(0%)', 'https://doi.org/10.1038/s41401-020-0485-4', '10.1016/j.tim.2015.06.003', '1241-1277', '1241-1277'),
('ORF3a', 'Domain', 'Transmembrane Segment I', 'Transmembrane Segment I', '1-15', '25393', '25435', '1-15', '25248', '25290', '8/9(89%)', '8/9(88%)', '0/9(0%)', 'doi.org/10.1128/mSystems.00266-20', 'doi.org/10.1128/mSystems.00266-20', '1-15', '1-15'),
('ORF3a', 'Domain', 'Transmembrane Segment II', 'Transmembrane Segment II', '36-40', '25498', '25510', '36-40', '25353', '25365', '5/5(100%)', '5/5(100%)', '0/5(0%)', 'doi.org/10.1128/mSystems.00266-20', 'doi.org/10.1128/mSystems.00266-20', '36-40', '36-40'),
('ORF3a', 'Domain', 'Transmembrane segment III', 'Transmembrane segment III', '91-133', '25663', '25789', '91-133', '25518', '25644', '36/43(84%)', '38/43(88%)', '0/43(0%)', 'doi.org/10.1128/mSystems.00266-20', 'doi.org/10.1128/mSystems.00266-20', '91-133', '91-133'),
('ORF3a', 'Domain', 'Transmembrane segment IV', 'Transmembrane segment IV', '141-149', '25813', '25837', '141-149', '25668', '25692', '8/9(89%) (Resuide 1-9)', '8/9(88%)', '0/9(0%)', 'https://doi.org/10.1128/mSystems.00266-20', 'https://doi.org/10.1128/mSystems.00266-20', '141-149', '141-149'),
('ORF3a', 'Domain', 'Transmembrane segment V', 'Transmembrane segment V', '160-163', '25870', '25879', '160-163', '25725', '25734', '4/4(100%)', '4/4(100%)', '0/4(0%)', 'https://doi.org/10.1128/mSystems.00266-20', 'https://doi.org/10.1128/mSystems.00266-20', '160-163', '160-163'),
('ORF3a', 'Domain', 'Transmembrane segment VI', 'Transmembrane segment VI', '171-173', '25903', '25909', '171-173', '25758', '25764', '2/3(66%)', '2/3(66%)', '', 'https://doi.org/10.1128/mSystems.00266-20', 'https://doi.org/10.1128/mSystems.00266-20', '171-173', '171-173'),
('ORF3b', 'Whole sequence comparison', '', '', '1-22', '3', '66', '1-22', '25393', '25456', '11/18(61%)', '11/18(61%)', '0/18(0%', 'ncbi.nlm.nih.gov/nuccore/NC_045512', 'ncbi.nlm.nih.gov/nuccore/NC_045512', '1-22', '1-22'),
('E', 'Domain', 'N-terminal', 'N-terminal', '1-8', '26245', '26266', '1-8', '26100', '26121', '8/8(100%)', '8/8(100%)', '0/8(0%)', 'https://doi.org/10.1016/j.ygeno.2020.07.001', 'https://doi.org/10.1529/biophysj.105.080119', '1-8', '1-8'),
('E', 'Domain', 'Transmembrane Domain (TM)', 'Transmembrane Domain (TM)', '9-37', '26269', '26353', '9-35', '26124', '26202', '27/27(100%)', '27/27(100%)', '0/27(0%)', 'https://doi.org/10.1016/j.ygeno.2020.07.001', 'https://doi.org/10.1529/biophysj.105.080119', '9-35', '9-37'),
('E', 'Domain', 'C-terminal', 'C-terminal', '38-75', '26356', '26467', '36-76', '26205', '26325', '35/39(90%)', '35/39(89%)', '1/39(2%)', 'https://doi.org/10.1016/j.ygeno.2020.07.001', 'https://doi.org/10.1529/biophysj.105.080119', '36-76', '38-76'),
('M', 'Domain', 'Transmembrane Domain (TM) 1', 'Transmembrane Domain (TM) 1', '20-40', '26310', '26370', '15-37', '26420', '26486', '17/19(89%)', '17/19(89%)', '0/19(0%)', 'doi.org/10.1182/blood.2020008488', '10.1126/science.1085953', '16-38', '20-40'),
('M', 'Domain', 'Transmembrane Domain (TM) 2', 'Transmembrane Domain (TM) 2', '50-70', '26400', '26460', '51-71', '26528', '26588', '18/19(95%)', '19/19(100%)', '0/19(0%)', 'doi.org/10.1182/blood.2020008488', '10.1126/science.1085953', '52-72', '50-70'),
('M', 'Domain', 'Transmembrane Domain (TM) 3', 'Transmembrane Domain (TM) 3', '80-100', '26490', '26550', '77-99', '26606', '26672', '19/21(90%)', '20/21(95%)', '0/21(0%)', 'doi.org/10.1182/blood.2020008488', '10.1126/science.1085953', '78-100', '80-100'),
('ORF6', 'Domain', 'N-terminal alpha-helix', 'N-terminal', '1-15', '27202', '27250', '1-15', '27244', '27292', '15/15(100%)', '15/15(100%)', '0/15(0%)', 'https://doi.org/10.1186/s13578-021-00568-7', '10.1128/JVI.02570-09', '1-15', '1-15'),
('ORF6', 'Domain', 'C-terminal', 'hydrophilic C-terminal tail', '49-61', '27349', '27385', '42-63', '27367', '27430', '9/13(69%)', '12/13(92%)', '0/13(0%)', 'https://doi.org/10.1101/2022.05.05.490850', '10.1128/JVI.02570-09', '42-63', '49-61'),
('ORF7a', 'Domain', 'N-terminal Signaling Region', 'N-terminal Signaling Region', '1-15', '27397', '27439', '1-15', '27256', '27208', '10/15(67%)', '10/15(66%)', '0/15(0%)', 'https://doi.org/10.1016/j.isci.2021.102187', 'https://doi.org/10.1016/j.isci.2021.102187', '1-15', '1-15'),
('ORF7a', 'Domain', 'Ig-like ectodomain', 'Ig-like ectodomain', '16-96', '27442', '27682', '16-96', '27301', '27541', '72/80(90%)', '74/80(92%)', '0/80(0%)', 'https://doi.org/10.1016/j.isci.2021.102187', 'https://doi.org/10.1016/j.isci.2021.102187', '16-96', '16-97'),
('ORF7a', 'Domain', 'hydrophobic transmembrane domain', 'hydrophobic transmembrane domain', '97-116', '27685', '27739', '98-116', '27547', '27601', '15/19(79%)', '15/19(78%)', '0/19(0%)', 'https://doi.org/10.1016/j.isci.2021.102187', 'https://doi.org/10.1016/j.isci.2021.102187', '98-116', '98-117'),
('ORF7a', 'motif', 'ER retention motif', 'ER retention motif', '116-121', '27742', '27754', '117-121', '27604', '27616', '4/4(100%)', '5/5(100%)', '0/4(0%)', 'https://doi.org/10.1016/j.isci.2021.102187', 'https://doi.org/10.1016/j.isci.2021.102187', '117-122', '118-122'),
('ORF7b', 'full sequence', 'No domain info available', '', '', '', '', '', '', '', '35/41(85%)', '37/41(90%)', '0/41(0%)', 'https://www.ncbi.nlm.nih.gov/protein/1820616061', 'https://www.ncbi.nlm.nih.gov/protein/1820616061', '', ''),
('N', 'Domain', 'N-terminal arm/Intrinsically disordered region', 'Intrinsiclally disordered Region (N-arm in SARS-CoV-2)', '1-47', '28274', '28412', '1-44', '28100', '28229', '36/44(82%)', '36/44(81%)', '1/44(2%)', '10.1186/s43556-020-00001-4', '10.3390/v6082991', '1-44', '1-48'),
('N', 'Domain', 'N-terminal arm (N-arm)', 'N-terminal', '48-174', '28415', '28793', '45-181', '28232', '28640', '117/127(92%)', '122/127(96%)', '0/127(0%)', '10.1186/s43556-020-00001-4', '10.3390/v6082991', '45-181', '49-175'),
('N', 'Domain', 'Central Linker Region', 'Central Linker Region', '175-248', '28796', '29015', '182-247', '28643', '28838', '43/49(88%)', '44/49(89%)', '0/49(0%)', '10.1186/s43556-020-00001-4', '10.3390/v6082991', '182-247', '176-249'),
('N', 'Domain', 'C-terminal', 'C-terminal', '249-364', '29021', '29366', '248-365', '28841', '29192', '111/116(96%)', '112/116(96%)', '0/116(0%)', '10.1186/s43556-020-00001-4', '10.3390/v6082991', '248-365', '250-365'),
('N', 'Domain', 'C-terminal tail/Intrinsically disordered region', 'Intrinsically disordered region (C-termainal tail in SA', '365-419', '29369', '29531', '366-422', '29195', '29363', '42/51(82%)', '43/51(84%)', '2/51(3%)', '10.1186/s43556-020-00001-4', '10.3390/v6082991', '366-422', '366-422'),
('nsp7', 'Domain', 'NSP12 Interaction Site', '[value-4]', '25-42', '11921', '11972', '25-42', '11811', '11862', '17/17(100%)', '17/17(100%)', '[value-13]', 'https://doi.org/10.1038/s41467-019-10280-3', 'https://doi.org/10.1038/s41467-019-10280-3', '25-42', '25-42'),
('ORF8', 'Domain', 'ORF8 Unique region', '', '46-83', '28032', '28143', '', '', '', 'No significant alignment', '', '', 'https://doi.org/10.1073/pnas.2021785118', 'https://doi.org/10.1073/pnas.2021785118', '', '48-86'),
('ORF8', 'Domain', 'N-terminal hydrophobic signal peptide', '', '1-15', '27894', '27939', '1-15', '27759', '27804', 'No significant alignment', '', '', 'https://doi.org/10.1016/j.compbiomed.2021.104380', 'https://doi.org/10.1016/j.compbiomed.2021.104380', '4-18', '1-15'),
('ORF8', 'Domain', 'Ig-like domain', '', '18-120', '27948', '28257', '', '', '', '5/16(31%) Residue 23-28', '9/16(56%)', '0/16(0%)', 'https://doi.org/10.1128/mBio.00760-20', 'https://doi.org/10.1128/mBio.00760-20', '', '18-47'),
('ORF8', 'Domain', 'Conserved Region in Core', '', '84-92', '28146', '28170', '82-95', '28005', '28044', '5/6(83%)', '6/6(100%)', '', 'https://doi.org/10.1016/j.compbiomed.2021.104380', 'https://doi.org/10.1016/j.compbiomed.2021.104380', '89-102', '87-96'),
('ORF9b', 'Domain', 'NEMO Interacting Region', '[value-4]', '1-30', '28284', '28374', '1-30', '28130', '28426', ' 19/30(63%)', '21/30(70%)', '1/30(3%)', 'https://doi.org/10.1016/j.celrep.2021.108761', 'https://doi.org/10.1016/j.celrep.2021.108761', '1-31', '1-30');
COMMIT;
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