Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Incorporate changes to Harmonica where possible #3

Open
tursynay opened this issue Feb 4, 2025 · 3 comments
Open

Incorporate changes to Harmonica where possible #3

tursynay opened this issue Feb 4, 2025 · 3 comments
Assignees

Comments

@tursynay
Copy link

tursynay commented Feb 4, 2025

@twhetzel can use this sheet and update Harmonica without waiting for Pierrette: https://docs.google.com/spreadsheets/d/1fmaNT2fs9g6S4X58t4537BQyTO8ieigQQYHW2IHQi0E/edit?gid=0#gid=0

@tursynay tursynay changed the title - Incorporate changes to Harmonica where possible (@twhetzel ) Incorporate changes to Harmonica where possible (@twhetzel ) Feb 4, 2025
@tursynay tursynay transferred this issue from include-dcc/include-linkml Feb 14, 2025
@twhetzel twhetzel changed the title Incorporate changes to Harmonica where possible (@twhetzel ) Incorporate changes to Harmonica where possible Feb 18, 2025
@twhetzel
Copy link
Collaborator

@lopierra for the rows in the gSheet "Incorrect Mappings", how can I find out the values for the mondo_result_match_type and hpo_result_match_type that the script generates (if blank, it was a manual annotation)? It does not look like all of those incorrect mappings are due to the script vs. my manual annotation.

@twhetzel
Copy link
Collaborator

twhetzel commented Feb 18, 2025

Incorrect Automatic Annotations and Actions

Source Term Mondo Term HPO Term Action GH Issue
Rash Exanthem (disease) (MONDO:000654) Remove xref on MONDO:000654 to NCIT:C39594 monarch-initiative/mondo#8744

@tursynay
Copy link
Author

Trish will check to see if there are additional terms need to be removed, Trish will follow up

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants