From 782f78a7a93e1a3aae4379ab5f79c17c5dfcce69 Mon Sep 17 00:00:00 2001 From: Gregory Way Date: Thu, 6 Mar 2025 11:17:28 -0700 Subject: [PATCH 1/3] remove citation info (keep just pointer) in readme --- README.md | 10 ++-------- 1 file changed, 2 insertions(+), 8 deletions(-) diff --git a/README.md b/README.md index fe571e13..33be5949 100644 --- a/README.md +++ b/README.md @@ -245,11 +245,5 @@ pycytominer.cyto_utils.write_gct( ## Citing Pycytominer -If you have used `pycytominer` in your project, please use the citation below. -You can also find the citation in the 'cite this repository' link at the top right under `about` section. - -APA: - -```text -Serrano, E., Chandrasekaran, N., Bunten, D., Brewer, K., Tomkinson, J., Kern, R., Bornholdt, M., Fleming, S., Pei, R., Arevalo, J., Tsang, H., Rubinetti, V., Tromans-Coia, C., Becker, T., Weisbart, E., Bunne, C., Kalinin, A. A., Senft, R., Taylor, S. J., Jamali, N., Adeboye, A., Abbasi, H. S., Goodman, A., Caicedo, J., Carpenter, A. E., Cimini, B. A., Singh, S., & Way, G. P. Reproducible image-based profiling with Pycytominer. https://doi.org/10.48550/arXiv.2311.13417 -``` +If you use `pycytominer` in your project, please cite our project. +You can see citation information in the 'cite this repository' link at the top right under `about` section. From f47cea5d792c3c37a13e15af1406a331d70b4f44 Mon Sep 17 00:00:00 2001 From: Gregory Way Date: Fri, 7 Mar 2025 09:27:02 -0700 Subject: [PATCH 2/3] remove sentence redundancy --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 33be5949..892762a4 100644 --- a/README.md +++ b/README.md @@ -245,5 +245,5 @@ pycytominer.cyto_utils.write_gct( ## Citing Pycytominer -If you use `pycytominer` in your project, please cite our project. +If you use `pycytominer` in your project, please cite our software. You can see citation information in the 'cite this repository' link at the top right under `about` section. From 755a84fa57f54d80b6a7445ca207e590e9d5fe86 Mon Sep 17 00:00:00 2001 From: Gregory Way Date: Wed, 12 Mar 2025 10:04:29 -0600 Subject: [PATCH 3/3] Update README.md Co-authored-by: Dave Bunten --- README.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 892762a4..13972273 100644 --- a/README.md +++ b/README.md @@ -246,4 +246,5 @@ pycytominer.cyto_utils.write_gct( ## Citing Pycytominer If you use `pycytominer` in your project, please cite our software. -You can see citation information in the 'cite this repository' link at the top right under `about` section. +You can see citation information in the 'cite this repository' link at the top right under `about` section within GitHub. +This information may also be referenced within the [`CITATION.cff`](CITATION.cff) file.