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Releases: colinbrislawn/unite-train

Demo! qiime2-2022.2-v8.3

22 Feb 16:32
@colinbrislawn colinbrislawn
8.3-qiime2-2022.2-demo
e1f277e
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Demo! qiime2-2022.2-v8.3 Pre-release
Pre-release

⚠️ This is a public demo, and has not been validated. I am not affiliated with the UNITE team. Use at your own risk!

This is a classifier for version 8.3 of the UNITE database trained for use with qiime2-2022.2 (install guide, release notes).

UNITE is licensed under CC BY-SA 4.0. If you use it, cite it! 🤝

Abarenkov, Kessy; Zirk, Allan; Piirmann, Timo; Pöhönen, Raivo; Ivanov, Filipp; Nilsson, R. Henrik; Kõljalg, Urmas (2021): UNITE QIIME release for Fungi 2. Version 10.05.2021. UNITE Community. https://doi.org/10.15156/BIO/1264763

Changes:

  • Add qiime version suffex to end of file names.
    Previous: unite_ver8_97_10.05.2021.qza, new: unite_ver8_97_10.05.2021-Q2-2022.2.qza
  • Include 97% database
    Added for completeness, because the other versions are recommended for use

There are three levels of classification provided here:

  • "97", which is 97% identity between taxa
  • "99", which is 99% identity between taxa
  • "dynamic", which uses 97% to 99% identity between taxa, as individually recommended by experts in the field.

There are two taxa scopes:

  • "" Fungi
  • "all" All eukaryotes

There is also version with and without an "s". (what does that mean?):

  • "" Includes singletons set as RefS (in dynamic files).
  • "s" Includes global and 97% singletons.

All feedback is welcome! Please open an issue! ✅

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Demo! qiime2-2021.11-v8.3

19 Jan 00:17
@colinbrislawn colinbrislawn
8.3-qiime2-2021.11-demo
1af6435
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Demo! qiime2-2021.11-v8.3 Pre-release
Pre-release

⚠️ This is a public demo, and has not been validated. I am not affiliated with the UNITE team. Use at your own risk!

This is a classifier for version 8.3 of the UNITE database trained for use with qiime2-2021.11 (install guide, release notes).

UNITE is licensed under CC BY-SA 4.0. If you use it, cite it! 🤝

Abarenkov, Kessy; Zirk, Allan; Piirmann, Timo; Pöhönen, Raivo; Ivanov, Filipp; Nilsson, R. Henrik; Kõljalg, Urmas (2021): UNITE QIIME release for Fungi 2. Version 10.05.2021. UNITE Community. https://doi.org/10.15156/BIO/1264763

There are two levels of classification provided here:

  • "99", which is 99% identity between taxa
  • "dynamic", which uses 97% to 99% identity between taxa, as individually recommended by experts in the field.

There are two taxa scopes:

  • "" Fungi
  • "all" All eukaryotes

There is also version with and without an "s". (what does that mean?):

  • "" Includes singletons set as RefS (in dynamic files).
  • "s" Includes global and 97% singletons.

All feedback is welcome! Please open an issue! ✅

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