From 02384bddd04228f8208d29ae295b9c3b251829c2 Mon Sep 17 00:00:00 2001 From: Christopher Tomkins-Tinch Date: Thu, 31 Oct 2024 09:24:41 -0400 Subject: [PATCH] add NCBI datasets to conda dependencies add NCBI datasets to conda dependencies, for downloading viral genomes and associated metadata --- requirements-conda.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/requirements-conda.txt b/requirements-conda.txt index 8e05833b..9580e6d7 100644 --- a/requirements-conda.txt +++ b/requirements-conda.txt @@ -13,6 +13,7 @@ lbzip2>=2.5 lz4-c>=1.8.3 minimap2>=2.17 mvicuna=1.0 +ncbi-datasets-cli=16.33.0 novoalign=3.09.04 parallel>=20190922 picard=2.25.6