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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(cms)
export(entropy)
export(evalIntegration)
export(isi)
export(ldfDiff)
export(ldfSce)
export(locStructure)
export(mixMetric)
export(visCluster)
export(visGroup)
export(visHist)
export(visIntegration)
export(visMetric)
export(visOverview)
import(kSamples)
importFrom(BiocGenerics,table)
importFrom(BiocNeighbors,findKNN)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(SingleCellExperiment,"reducedDims<-")
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,counts)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SingleCellExperiment,reducedDimNames)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assays)
importFrom(cowplot,plot_grid)
importFrom(dplyr,.data)
importFrom(dplyr,arrange)
importFrom(dplyr,as_data_frame)
importFrom(dplyr,as_tibble)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,filter)
importFrom(dplyr,group_by_at)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_at)
importFrom(dplyr,n)
importFrom(dplyr,select)
importFrom(dplyr,select_if)
importFrom(dplyr,starts_with)
importFrom(dplyr,summarize)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_violin)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggridges,geom_density_ridges)
importFrom(kSamples,ad.test)
importFrom(magrittr,"%>%")
importFrom(magrittr,extract2)
importFrom(magrittr,set_colnames)
importFrom(magrittr,set_names)
importFrom(magrittr,set_rownames)
importFrom(methods,is)
importFrom(purrr,"%>%")
importFrom(purrr,map)
importFrom(purrr,negate)
importFrom(scater,runPCA)
importFrom(scater,runTSNE)
importFrom(stats,density)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,weighted.mean)
importFrom(tidyr,gather)
importFrom(viridis,scale_color_viridis)