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Copy pathVCF_GRCm38_strains_31.Aligned.annotated.vcf
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VCF_GRCm38_strains_31.Aligned.annotated.vcf
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##fileformat=VCFv4.2
##FILTER=<ID=OffExome,Description="Variant off-exome in all effect predictions">
##GATKCommandLine=<ID=LeftAlignAndTrimVariants,CommandLine="LeftAlignAndTrimVariants --output output/VCF_GRCm38_31_strains.Aligned.vcf --variant VCF_GRCm38_31_strains.vcf --read-index reference/mm10/GRCm38_68.fa.fai --reference reference/mm10/GRCm38_68.fa --sequence-dictionary reference/mm10/GRCm38_68.dict --dont-trim-alleles false --split-multi-allelics false --keep-original-ac false --max-indel-length 200 --max-leading-bases 1000 --suppress-reference-path false --interval-set-rule UNION --interval-padding 0 --interval-exclusion-padding 0 --interval-merging-rule ALL --read-validation-stringency SILENT --seconds-between-progress-updates 10.0 --disable-sequence-dictionary-validation false --create-output-bam-index true --create-output-bam-md5 false --create-output-variant-index true --create-output-variant-md5 false --lenient false --add-output-sam-program-record true --add-output-vcf-command-line true --cloud-prefetch-buffer 40 --cloud-index-prefetch-buffer -1 --disable-bam-index-caching false --sites-only-vcf-output false --help false --version false --showHidden false --verbosity INFO --QUIET false --use-jdk-deflater false --use-jdk-inflater false --gcs-max-retries 20 --gcs-project-for-requester-pays --disable-tool-default-read-filters false",Version="4.1.2.0",Date="January 30, 2020 1:07:35 PM EST">
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##INFO=<ID=SVANN,Number=1,Type=String,Description="Functional SV Annotation:'Annotation|Annotation_Impact|Gene_Name|Gene_ID|Feature_Type|Feature_ID|Transcript_BioType|ERRORS / WARNINGS / INFO'">
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##INFO=<ID=alleles,Number=.,Type=String,Description="The_alleles_of_the_variant">
##INFO=<ID=geneLevelConsequence,Number=.,Type=String,Description="VEP_consequence_of_the_variant">
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##INFO=<ID=impact,Number=1,Type=String,Description="Variant_impact_scale">
##INFO=<ID=soTerm,Number=1,Type=String,Description="The_Sequence_Ontology_term_for_the_variant">
##INFO=<ID=strain_id,Number=.,Type=String,Description="Strain_id">
##INFO=<ID=strain_name,Number=.,Type=String,Description="Strain_name">
##INFO=<ID=symbol,Number=1,Type=String,Description="The_human_readable_name_of_the_allele">
##INFO=<ID=symbol_text,Number=1,Type=String,Description="Another_human_readable_representation_of_the_allele">
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##fileDate=20191113
##jannovarCommand=annotate-vcf --show-all -d reference/mm10/mm10_ucsc.ser -i output/Carol_vcf/VCF_GRCm38_31_strains.Aligned.vcf -o VCF_GRCm38_strains_31.Aligned.annotated.vcf
##jannovarVersion=0.32
##phasing=partial
##reference=file:///Users/elkasb/git/mvar-vcf-pipeline/reference/mm10/GRCm38_68.fa
##source=AGR_VCF_File_generator
##source=LeftAlignAndTrimVariants
#CHROM POS ID REF ALT QUAL FILTER INFO
1 4493192 NC_000067.6:g.4493192A>C A C . . ANN=C|missense_variant|MODERATE|Sox17|20671|transcript|ENSMUST00000027035.9|Coding|4/5|c.215T>G|p.(M72R)|1297/5483|215/1260|72/420||,C|missense_variant|MODERATE|Sox17|20671|transcript|ENSMUST00000116652.7|Coding|3/4|c.215T>G|p.(M72R)|464/4651|215/1260|72/420||,C|missense_variant|MODERATE|Sox17|20671|transcript|ENSMUST00000191939.1|Coding|1/2|c.215T>G|p.(M72R)|544/1271|215/511|72/170||,C|missense_variant|MODERATE|Sox17|20671|transcript|ENSMUST00000192913.1|Coding|3/4|c.215T>G|p.(M72R)|1212/3930|215/509|72/169||,C|coding_transcript_intron_variant|LOW|Sox17|20671|transcript|ENSMUST00000191647.1|Coding|3/3|c.113-524T>G|p.(%3D)|196/3873|113/323|38/107||,C|coding_transcript_intron_variant|LOW|Sox17|20671|transcript|ENSMUST00000192650.5|Coding|3/3|c.113-524T>G|p.(%3D)|1964/5965|113/1065|38/355||,C|5_prime_UTR_intron_variant|LOW|Sox17|20671|transcript|ENSMUST00000195555.1|Coding|2/2|c.-72-529T>G|p.(%3D)|564/5508|1/876|1/292||,C|non_coding_transcript_exon_variant|LOW|Sox17|.|transcript|ENSMUST00000192505.1|Noncoding|1/1|n.413T>G||413/1148||||;allele_of_genes="MGI:107543";alleles="MGI:5751535";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.4493192A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Sox17<sup>SHIVA</sup>";symbol_text="Sox17<SHIVA>"
1 9685685 NC_000067.6:g.9685685G>T G T . . ANN=T|stop_gained|HIGH|Mybl1|17864|transcript|ENSMUST00000188212.1|Coding|6/8|c.651C>A|p.(C217*)|651/17792|651/799|217/266||,T|missense_variant|MODERATE|Mybl1|17864|transcript|ENSMUST00000088658.10|Coding|6/16|c.638C>A|p.(A213E)|893/32795|638/2256|213/752||,T|missense_variant|MODERATE|Mybl1|17864|transcript|ENSMUST00000115468.8|Coding|6/15|c.638C>A|p.(A213E)|708/30488|638/2076|213/692||;allele_of_genes="MGI:99925";alleles="MGI:3512907";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.9685685G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mybl1<sup>repro9</sup>";symbol_text="Mybl1<repro9>"
1 9886104 NC_000067.6:g.9886104T>C T C . . ANN=C|missense_variant|MODERATE|Sgk3|170755|transcript|ENSMUST00000097826.5|Coding|14/17|c.1036T>C|p.(C346R)|1310/51457|1036/1491|346/497||,C|missense_variant|MODERATE|Sgk3|170755|transcript|ENSMUST00000166384.7|Coding|14/17|c.1036T>C|p.(C346R)|1298/102737|1036/1491|346/497||,C|missense_variant|MODERATE|Sgk3|170755|transcript|ENSMUST00000168907.7|Coding|15/18|c.1036T>C|p.(C346R)|1369/102703|1036/1491|346/497||,C|missense_variant|MODERATE|Sgk3|170755|transcript|ENSMUST00000171265.7|Coding|14/17|c.1036T>C|p.(C346R)|1272/52572|1036/1491|346/497||,C|3_prime_UTR_exon_variant|LOW|Sgk3|170755|transcript|ENSMUST00000188298.6|Coding|15/18|c.*1051T>C|p.(%3D)|1526/101801|208/207|70/69||,C|3_prime_UTR_exon_variant|LOW|Sgk3|170755|transcript|ENSMUST00000188738.6|Coding|14/17|c.*327T>C|p.(%3D)|1620/101434|1003/1002|335/334||,C|3_prime_UTR_exon_variant|LOW|Sgk3|170755|transcript|ENSMUST00000188782.6|Coding|15/18|c.*44T>C|p.(%3D)|1427/102628|1051/1050|351/350||,C|non_coding_transcript_exon_variant|LOW|Sgk3|170755|transcript|ENSMUST00000191338.1|Noncoding|4/4|n.622T>C||622/5611||||;allele_of_genes="MGI:2182368";alleles="MGI:4421790";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.9886104T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sgk3<sup>m1Btlr</sup>";symbol_text="Sgk3<m1Btlr>"
1 34164167 NC_000067.6:g.34164167A>G A G . . ANN=G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000097785.9|Coding|17/98|c.2156A>G|p.(E719G)|2156/296837|2156/22182|719/7394||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000097786.9|Coding|17/93|c.2156A>G|p.(E719G)|2168/296840|2156/16140|719/5380||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000115104.9|Coding|17/98|c.2156A>G|p.(E719G)|2156/296826|2156/22221|719/7407||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000183034.4|Coding|20/103|c.2690A>G|p.(E897G)|2737/399368|2690/23154|897/7718||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000183302.5|Coding|7/24|c.1178A>G|p.(E393G)|1178/23575|1178/7920|393/2640||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000185269.6|Coding|7/84|c.1178A>G|p.(E393G)|1178/148075|1178/15528|393/5176||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000185897.6|Coding|7/26|c.1178A>G|p.(E393G)|1178/32934|1178/8961|393/2987||,G|missense_variant|MODERATE|Dst|13518|transcript|ENSMUST00000187486.6|Coding|18/33|c.2276A>G|p.(E759G)|2402/168916|2276/4413|759/1471||,G|non_coding_transcript_exon_variant|LOW|Dst|.|transcript|ENSMUST00000182335.1|Noncoding|1/1|n.2244A>G||2244/3478||||,G|non_coding_transcript_exon_variant|LOW|Dst|13518|transcript|ENSMUST00000183331.7|Noncoding|17/18|n.2284A>G||2284/158521||||;allele_of_genes="MGI:104627";alleles="MGI:5619126";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.34164167A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dst<sup>m2Btlr</sup>";symbol_text="Dst<m2Btlr>"
1 34165155 NC_000067.6:g.34165155T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000097785.9|Coding|19/97|c.2427+2T>C|p.?|2428/296837|2428/22182|810/7394||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000097786.9|Coding|19/92|c.2427+2T>C|p.?|2440/296840|2428/16140|810/5380||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000115104.9|Coding|19/97|c.2427+2T>C|p.?|2428/296826|2428/22221|810/7407||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000183034.4|Coding|22/102|c.2961+2T>C|p.?|3009/399368|2962/23154|988/7718||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000183302.5|Coding|9/23|c.1449+2T>C|p.?|1450/23575|1450/7920|484/2640||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000185269.6|Coding|9/83|c.1449+2T>C|p.?|1450/148075|1450/15528|484/5176||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000185897.6|Coding|9/25|c.1449+2T>C|p.?|1450/32934|1450/8961|484/2987||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dst|13518|transcript|ENSMUST00000187486.6|Coding|20/32|c.2547+2T>C|p.?|2674/168916|2548/4413|850/1471||,C|non_coding_transcript_exon_variant|LOW|Dst|.|transcript|ENSMUST00000182335.1|Noncoding|1/1|n.3232T>C||3232/3478||||;allele_of_genes="MGI:104627";alleles="MGI:5619125";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.34165155T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dst<sup>m1Btlr</sup>";symbol_text="Dst<m1Btlr>"
1 34223795 NC_000067.6:g.34223795T>A T A . . ANN=A|coding_transcript_intron_variant|LOW|Dst|13518|transcript|ENSMUST00000097785.9|Coding|54/97|c.13601-9T>A|p.(%3D)|13601/296837|13601/22182|4534/7394||,A|coding_transcript_intron_variant|LOW|Dst|13518|transcript|ENSMUST00000097786.9|Coding|49/92|c.7559-9T>A|p.(%3D)|7571/296840|7559/16140|2520/5380||,A|coding_transcript_intron_variant|LOW|Dst|13518|transcript|ENSMUST00000115104.9|Coding|54/97|c.13601-9T>A|p.(%3D)|13601/296826|13601/22221|4534/7407||,A|coding_transcript_intron_variant|LOW|Dst|13518|transcript|ENSMUST00000183034.4|Coding|57/102|c.14135-9T>A|p.(%3D)|14182/399368|14135/23154|4712/7718||,A|coding_transcript_intron_variant|LOW|Dst|13518|transcript|ENSMUST00000185269.6|Coding|39/83|c.6581-9T>A|p.(%3D)|6581/148075|6581/15528|2194/5176||;allele_of_genes="MGI:104627";alleles="MGI:5619133";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000067.6:g.34223795T>A";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dst<sup>m3Btlr</sup>";symbol_text="Dst<m3Btlr>"
1 34536212 NC_000067.6:g.34536212T>A T A . . ANN=A|missense_variant|MODERATE|Cfc1|12627|transcript|ENSMUST00000027298.4|Coding|2/6|c.68T>A|p.(V23E)|323/8666|68/609|23/203||;allele_of_genes="MGI:109448";alleles="MGI:5311378";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.34536212T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cfc1<sup>b2b970Clo</sup>";symbol_text="Cfc1<b2b970Clo>"
1 34536248 NC_000067.6:g.34536248G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cfc1|12627|transcript|ENSMUST00000027298.4|Coding|2/5|c.103+1G>A|p.?|359/8666|104/609|35/203||;allele_of_genes="MGI:109448";alleles="MGI:5560815";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.34536248G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cfc1<sup>b2b2736.1Clo</sup>";symbol_text="Cfc1<b2b2736.1Clo>"
1 42698413 NC_000067.6:g.42698413T>C T C . . ANN=C|missense_variant|MODERATE|Pou3f3|18993|transcript|ENSMUST00000054883.3|Coding|1/1|c.1268T>C|p.(L423P)|2646/7409|1268/1494|423/498||,C|non_coding_transcript_intron_variant|LOW|Gm20646|.|transcript|ENSMUST00000176807.2|Noncoding|1/1|n.264+3225T>C||265/49867||||,C|non_coding_transcript_intron_variant|LOW|Gm20646|.|transcript|ENSMUST00000199521.4|Noncoding|1/1|n.264+3225T>C||265/46044||||;allele_of_genes="MGI:102564";alleles="MGI:3712282";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.42698413T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Pou3f3<sup>urehr2</sup>";symbol_text="Pou3f3<urehr2>"
1 44174277 NC_000067.6:g.44174277_44174278delinsCC AT CC . . ANN=CC|mnv|HIGH|Ercc5|22592|transcript|ENSMUST00000027214.3|Coding|11/15|c.2432_2433delATinsCC|p.(D811A)|2648/33414|2432/3513|811/1171||,CC|non_coding_transcript_exon_variant|LOW|Ercc5|22592|transcript|ENSMUST00000131177.7|Noncoding|10/14|n.2980_2981delATinsCC||2980/33414||||;allele_of_genes="MGI:103582";alleles="MGI:3043590";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.44174277_44174278delinsCC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Ercc5<sup>tm4Shm</sup>";symbol_text="Ercc5<tm4Shm>"
1 52123209 NC_000067.6:g.52123209A>T A T . . ANN=T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000070968.13|Coding|4/25|c.224A>T|p.(N75I)|557/42411|224/2250|75/750||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186057.6|Coding|4/25|c.224A>T|p.(N75I)|521/41107|224/2268|75/756||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186574.6|Coding|4/23|c.224A>T|p.(N75I)|572/35973|224/2139|75/713||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186857.6|Coding|4/25|c.224A>T|p.(N75I)|505/41516|224/2250|75/750||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000188681.6|Coding|4/6|c.224A>T|p.(N75I)|477/13136|224/462|75/154||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000189347.6|Coding|4/23|c.224A>T|p.(N75I)|407/35783|224/2139|75/713||,T|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000191435.6|Coding|4/23|c.224A>T|p.(N75I)|541/35923|224/2139|75/713||,T|non_coding_transcript_exon_variant|LOW|Gm28177|20846|transcript|ENSMUST00000185516.1|Noncoding|16/34|n.1654A>T||1654/78827||||,T|non_coding_transcript_exon_variant|LOW|Stat1|20846|transcript|ENSMUST00000185743.1|Noncoding|4/8|n.440A>T||440/18281||||;allele_of_genes="MGI:103063";alleles="MGI:6305319";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.52123209A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Stat1<sup>m5Btlr</sup>";symbol_text="Stat1<m5Btlr>"
1 52123214 NC_000067.6:g.52123214_52123215delinsGC TT GC . . ANN=GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000070968.13|Coding|4/25|c.229_230delTTinsGC|p.(F77A)|562/42411|229/2250|77/750||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000186057.6|Coding|4/25|c.229_230delTTinsGC|p.(F77A)|526/41107|229/2268|77/756||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000186574.6|Coding|4/23|c.229_230delTTinsGC|p.(F77A)|577/35973|229/2139|77/713||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000186857.6|Coding|4/25|c.229_230delTTinsGC|p.(F77A)|510/41516|229/2250|77/750||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000188681.6|Coding|4/6|c.229_230delTTinsGC|p.(F77A)|482/13136|229/462|77/154||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000189347.6|Coding|4/23|c.229_230delTTinsGC|p.(F77A)|412/35783|229/2139|77/713||,GC|mnv|HIGH|Stat1|20846|transcript|ENSMUST00000191435.6|Coding|4/23|c.229_230delTTinsGC|p.(F77A)|546/35923|229/2139|77/713||,GC|non_coding_transcript_exon_variant|LOW|Gm28177|20846|transcript|ENSMUST00000185516.1|Noncoding|16/34|n.1659_1660delTTinsGC||1659/78827||||,GC|non_coding_transcript_exon_variant|LOW|Stat1|20846|transcript|ENSMUST00000185743.1|Noncoding|4/8|n.445_446delTTinsGC||445/18281||||;allele_of_genes="MGI:103063";alleles="MGI:5588365";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.52123214_52123215delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Stat1<sup>tm2.1Uvin</sup>";symbol_text="Stat1<tm2.1Uvin>"
1 52140588 NC_000067.6:g.52140588T>A T A . . ANN=A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000070968.13|Coding|11/25|c.956T>A|p.(V319E)|1289/42411|956/2250|319/750||,A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186057.6|Coding|11/25|c.956T>A|p.(V319E)|1253/41107|956/2268|319/756||,A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186574.6|Coding|11/23|c.956T>A|p.(V319E)|1304/35973|956/2139|319/713||,A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000186857.6|Coding|11/25|c.956T>A|p.(V319E)|1237/41516|956/2250|319/750||,A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000189347.6|Coding|11/23|c.956T>A|p.(V319E)|1139/35783|956/2139|319/713||,A|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000191435.6|Coding|11/23|c.956T>A|p.(V319E)|1273/35923|956/2139|319/713||,A|non_coding_transcript_intron_variant|LOW|Gm28177|20846|transcript|ENSMUST00000185516.1|Noncoding|22/33|n.2374+1236T>A||2375/78827||||;allele_of_genes="MGI:103063";alleles="MGI:3619019";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.52140588T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Stat1<sup>m1Btlr</sup>";symbol_text="Stat1<m1Btlr>"
1 52153923 NC_000067.6:g.52153923C>G C G . . ANN=G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000070968.13|Coding|22/25|c.1953C>G|p.(Y651*)|2286/42411|1953/2250|651/750||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000186057.6|Coding|22/25|c.1971C>G|p.(Y657*)|2268/41107|1971/2268|657/756||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000186574.6|Coding|22/23|c.1953C>G|p.(Y651*)|2301/35973|1953/2139|651/713||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000186857.6|Coding|22/25|c.1953C>G|p.(Y651*)|2234/41516|1953/2250|651/750||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000189244.6|Coding|5/8|c.435C>G|p.(Y145*)|435/11606|435/732|145/244||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000189347.6|Coding|22/23|c.1953C>G|p.(Y651*)|2136/35783|1953/2139|651/713||,G|stop_gained|HIGH|Stat1|20846|transcript|ENSMUST00000191435.6|Coding|22/23|c.1953C>G|p.(Y651*)|2270/35923|1953/2139|651/713||,G|missense_variant|MODERATE|Stat1|20846|transcript|ENSMUST00000189336.1|Coding|2/6|c.206C>G|p.(T69R)|206/7308|206/395|69/131||,G|non_coding_transcript_exon_variant|LOW|Gm28177|20846|transcript|ENSMUST00000185516.1|Noncoding|32/34|n.3245C>G||3245/78827||||;allele_of_genes="MGI:103063";alleles="MGI:6113472";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.52153923C>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Stat1<sup>m3Btlr</sup>";symbol_text="Stat1<m3Btlr>"
1 59845710 NC_000067.6:g.59845710T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Bmpr2|12168|transcript|ENSMUST00000087435.6|Coding|6/12|c.852+2T>C|p.?|2106/115615|853/3117|285/1039||;allele_of_genes="MGI:1095407";alleles="MGI:5560496";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.59845710T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Bmpr2<sup>b2b2556Clo</sup>";symbol_text="Bmpr2<b2b2556Clo>"
1 59868444 NC_000067.6:g.59868444C>T C T . . ANN=T|stop_gained|HIGH|Bmpr2|12168|transcript|ENSMUST00000087435.6|Coding|12/13|c.2695C>T|p.(R899*)|3948/115615|2695/3117|899/1039||;allele_of_genes="MGI:1095407";alleles="MGI:5776726";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.59868444C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3037980";strain_name="129S1/SvImJ";symbol="Bmpr2<sup>tm1Mmue</sup>";symbol_text="Bmpr2<tm1Mmue>"
1 69538798 NC_000067.6:g.69538798G>T G T . . ANN=T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000027146.8|Coding|8/8|c.1551C>A|p.(H517Q)|1694/154608|1551/1581|517/527||,T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000187184.6|Coding|9/9|c.1473C>A|p.(H491Q)|1797/148664|1473/1503|491/501||,T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000188110.6|Coding|6/6|c.1335C>A|p.(H445Q)|1335/145390|1335/1365|445/455||,T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000190771.6|Coding|8/8|c.1569C>A|p.(H523Q)|1722/147850|1569/1599|523/533||,T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000190855.6|Coding|6/6|c.1329C>A|p.(H443Q)|1329/145390|1329/1359|443/453||,T|missense_variant|MODERATE|Ikzf2|22779|transcript|ENSMUST00000191262.6|Coding|5/5|c.1116C>A|p.(H372Q)|1116/145390|1116/1146|372/382||,T|non_coding_transcript_intron_variant|LOW|Gm29114|.|transcript|ENSMUST00000187100.1|Noncoding|1/3|n.40-1716G>T||40/33776||||;allele_of_genes="MGI:1342541";alleles="MGI:5792004";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.69538798G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ikzf2<sup>mpc173H</sup>";symbol_text="Ikzf2<mpc173H>"
1 72339029 NC_000067.6:g.72339029T>C T C . . ANN=C|missense_variant|MODERATE|Xrcc5|22596|transcript|ENSMUST00000027379.8|Coding|11/21|c.1183T>C|p.(Y395H)|1309/87532|1183/2199|395/733||;allele_of_genes="MGI:104517";alleles="MGI:6304305";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.72339029T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Xrcc5<sup>m1Btlr</sup>";symbol_text="Xrcc5<m1Btlr>"
1 74892749 NC_000067.6:g.74892749A>G A G . . ANN=G|missense_variant|MODERATE|Cryba2|12958|transcript|ENSMUST00000006721.2|Coding|2/5|c.139T>C|p.(S47P)|210/3210|139/594|47/198||,G|missense_variant|MODERATE|Cryba2|12958|transcript|ENSMUST00000133833.2|Coding|1/3|c.139T>C|p.(S47P)|144/2362|139/165|47/55||;allele_of_genes="MGI:104336";alleles="MGI:4950379";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.74892749A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cryba2<sup>Aca30</sup>";symbol_text="Cryba2<Aca30>"
1 82289839 NC_000067.6:g.82289839C>A C A . . ANN=A|stop_gained|HIGH|Irs1|16367|transcript|ENSMUST00000069799.2|Coding|1/2|c.655G>T|p.(E219*)|1578/58316|655/3696|219/1232||;allele_of_genes="MGI:99454";alleles="MGI:5792013";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.82289839C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irs1<sup>mpc178H</sup>";symbol_text="Irs1<mpc178H>"
1 82489699 NC_000067.6:g.82489699C>T C T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Col4a4|12829|transcript|ENSMUST00000087050.6|Coding|30/47|c.2692+1G>A|p.?|3044/138427|2693/5049|898/1683||;allele_of_genes="MGI:104687";alleles="MGI:4838032";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.82489699C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Col4a4<sup>m1Btlr</sup>";symbol_text="Col4a4<m1Btlr>"
1 83179309 NC_000067.6:g.83179309T>A T A . . ANN=A|stop_gained|HIGH|Daw1|71227|transcript|ENSMUST00000065403.6|Coding|2/13|c.57T>A|p.(Y19*)|75/50794|57/1248|19/416||,A|stop_gained|HIGH|Daw1|71227|transcript|ENSMUST00000065436.9|Coding|2/10|c.57T>A|p.(Y19*)|94/50807|57/933|19/311||,A|stop_gained|HIGH|Daw1|71227|transcript|ENSMUST00000113436.7|Coding|2/10|c.57T>A|p.(Y19*)|94/50813|57/1071|19/357||,A|stop_gained|HIGH|Daw1|71227|transcript|ENSMUST00000149342.7|Coding|2/13|c.57T>A|p.(Y19*)|87/50802|57/213|19/71||,A|non_coding_transcript_exon_variant|LOW|Daw1|71227|transcript|ENSMUST00000133079.1|Noncoding|2/2|n.105T>A||105/20073||||;allele_of_genes="MGI:1923089";alleles="MGI:5311383";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.83179309T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Daw1<sup>b2b1116Clo</sup>";symbol_text="Daw1<b2b1116Clo>"
1 83180428 NC_000067.6:g.83180428T>C T C . . ANN=C|missense_variant|MODERATE|Daw1|71227|transcript|ENSMUST00000065403.6|Coding|3/13|c.197T>C|p.(L66P)|215/50794|197/1248|66/416||,C|missense_variant|MODERATE|Daw1|71227|transcript|ENSMUST00000065436.9|Coding|3/10|c.197T>C|p.(L66P)|234/50807|197/933|66/311||,C|missense_variant|MODERATE|Daw1|71227|transcript|ENSMUST00000113436.7|Coding|3/10|c.197T>C|p.(L66P)|234/50813|197/1071|66/357||,C|synonymous_variant|LOW|Daw1|71227|transcript|ENSMUST00000149342.7|Coding|3/13|c.177T>C|p.(%3D)|207/50802|177/213|59/71||;allele_of_genes="MGI:1923089";alleles="MGI:5431501";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.83180428T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Daw1<sup>b2b1584Clo</sup>";symbol_text="Daw1<b2b1584Clo>"
1 87697510 NC_000067.6:g.87697510T>C T C . . ANN=C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000042275.14|Coding|12/27|c.1408T>C|p.(S470P)|1535/100142|1408/3573|470/1191||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000072999.12|Coding|12/28|c.1408T>C|p.(S470P)|1499/100106|1408/2880|470/960||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000167032.1|Coding|7/22|c.622T>C|p.(S208P)|781/44264|622/2787|208/929||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000168783.7|Coding|12/28|c.1411T>C|p.(S471P)|1501/99296|1411/3393|471/1131||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000169754.7|Coding|12/27|c.1411T>C|p.(S471P)|1588/100196|1411/3576|471/1192||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000170300.7|Coding|7/23|c.622T>C|p.(S208P)|781/44264|622/2604|208/868||;allele_of_genes="MGI:107357";alleles="MGI:5563462";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.87697510T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Inpp5d<sup>m1Anu</sup>";symbol_text="Inpp5d<m1Anu>"
1 87697546 NC_000067.6:g.87697546G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000042275.14|Coding|12/26|c.1443+1G>A|p.?|1571/100142|1444/3573|482/1191||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000072999.12|Coding|12/27|c.1443+1G>A|p.?|1535/100106|1444/2880|482/960||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000167032.1|Coding|7/21|c.657+1G>A|p.?|817/44264|658/2787|220/929||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000168783.7|Coding|12/27|c.1446+1G>A|p.?|1537/99296|1447/3393|483/1131||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000169754.7|Coding|12/26|c.1446+1G>A|p.?|1624/100196|1447/3576|483/1192||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Inpp5d|16331|transcript|ENSMUST00000170300.7|Coding|7/22|c.657+1G>A|p.?|817/44264|658/2604|220/868||;allele_of_genes="MGI:107357";alleles="MGI:5607764";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.87697546G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Inpp5d<sup>m2Btlr</sup>";symbol_text="Inpp5d<m2Btlr>"
1 87701427 NC_000067.6:g.87701427T>C T C . . ANN=C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000042275.14|Coding|17/27|c.1919T>C|p.(I640T)|2046/100142|1919/3573|640/1191||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000072999.12|Coding|17/28|c.1919T>C|p.(I640T)|2010/100106|1919/2880|640/960||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000167032.1|Coding|12/22|c.1133T>C|p.(I378T)|1292/44264|1133/2787|378/929||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000168783.7|Coding|17/28|c.1922T>C|p.(I641T)|2012/99296|1922/3393|641/1131||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000169754.7|Coding|17/27|c.1922T>C|p.(I641T)|2099/100196|1922/3576|641/1192||,C|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000170300.7|Coding|12/23|c.1133T>C|p.(I378T)|1292/44264|1133/2604|378/868||;allele_of_genes="MGI:107357,MGI:107357";alleles="MGI:5050823,MGI:5050823";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000067.6:g.87701427T>C";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Inpp5d<sup>el20</sup>";symbol_text="Inpp5d<el20>"
1 87705964 NC_000067.6:g.87705964A>G A G . . ANN=G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000042275.14|Coding|19/27|c.2108A>G|p.(H703R)|2235/100142|2108/3573|703/1191||,G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000072999.12|Coding|19/28|c.2108A>G|p.(H703R)|2199/100106|2108/2880|703/960||,G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000167032.1|Coding|14/22|c.1322A>G|p.(H441R)|1481/44264|1322/2787|441/929||,G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000168783.7|Coding|19/28|c.2111A>G|p.(H704R)|2201/99296|2111/3393|704/1131||,G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000169754.7|Coding|19/27|c.2111A>G|p.(H704R)|2288/100196|2111/3576|704/1192||,G|missense_variant|MODERATE|Inpp5d|16331|transcript|ENSMUST00000170300.7|Coding|14/23|c.1322A>G|p.(H441R)|1481/44264|1322/2604|441/868||;allele_of_genes="MGI:107357,MGI:107357";alleles="MGI:6113622,MGI:6113622";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000067.6:g.87705964A>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Inpp5d<sup>M3Btlr</sup>";symbol_text="Inpp5d<M3Btlr>"
1 90928122 NC_000067.6:g.90928122T>C T C . . ANN=C|missense_variant|MODERATE|Mlph|171531|transcript|ENSMUST00000027528.6|Coding|3/16|c.250T>C|p.(C84R)|443/36058|250/1773|84/591||,C|missense_variant|MODERATE|Mlph|171531|transcript|ENSMUST00000125149.1|Coding|1/2|c.169T>C|p.(C57R)|444/754|169/361|57/120||;allele_of_genes="MGI:2176380";alleles="MGI:5688600";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.90928122T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mlph<sup>ln-2Btlr</sup>";symbol_text="Mlph<ln-2Btlr>"
1 90933300 NC_000067.6:g.90933300A>G A G . . ANN=G|coding_transcript_intron_variant|LOW|Mlph|171531|transcript|ENSMUST00000027528.6|Coding|6/15|c.673-17A>G|p.(%3D)|866/36058|673/1773|225/591||;allele_of_genes="MGI:2176380";alleles="MGI:3784966";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000067.6:g.90933300A>G";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mlph<sup>ln-Btlr</sup>";symbol_text="Mlph<ln-Btlr>"
1 93056245 NC_000067.6:g.93056245G>T G T . . ANN=T|synonymous_variant|LOW|Kif1a|.|transcript|ENSMUST00000190723.6|Coding|21/49|c.1804C>A|p.(%3D)|2052/84012|1804/5376|602/1792||,T|synonymous_variant|LOW|Kif1a|16560|transcript|ENSMUST00000086819.11|Coding|20/47|c.1804C>A|p.(%3D)|1804/63965|1804/5097|602/1699||,T|synonymous_variant|LOW|Kif1a|16560|transcript|ENSMUST00000112958.8|Coding|20/48|c.1777C>A|p.(%3D)|1905/84081|1777/5097|593/1699||,T|synonymous_variant|LOW|Kif1a|16560|transcript|ENSMUST00000171556.7|Coding|20/47|c.1777C>A|p.(%3D)|1921/83568|1777/5070|593/1690||,T|synonymous_variant|LOW|Kif1a|16560|transcript|ENSMUST00000171796.7|Coding|20/48|c.1777C>A|p.(%3D)|1896/86359|1777/5094|593/1698||,T|non_coding_transcript_intron_variant|LOW|Kif1a|16560|transcript|ENSMUST00000188493.1|Noncoding|4/6|n.360-16434C>A||360/62804||||;allele_of_genes="MGI:108391";alleles="MGI:5752892";geneLevelConsequence="synonymous_variant";hgvs_nomenclature="NC_000067.6:g.93056245G>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kif1a<sup>lgdg-2J</sup>";symbol_text="Kif1a<lgdg-2J>"
1 93076218 NC_000067.6:g.93076218G>A G A . . ANN=A|missense_variant|MODERATE|Kif1a|.|transcript|ENSMUST00000190723.6|Coding|6/49|c.541C>T|p.(L181F)|789/84012|541/5376|181/1792||,A|missense_variant|MODERATE|Kif1a|16560|transcript|ENSMUST00000086819.11|Coding|5/47|c.541C>T|p.(L181F)|541/63965|541/5097|181/1699||,A|missense_variant|MODERATE|Kif1a|16560|transcript|ENSMUST00000112958.8|Coding|6/48|c.541C>T|p.(L181F)|669/84081|541/5097|181/1699||,A|missense_variant|MODERATE|Kif1a|16560|transcript|ENSMUST00000171556.7|Coding|6/47|c.541C>T|p.(L181F)|685/83568|541/5070|181/1690||,A|missense_variant|MODERATE|Kif1a|16560|transcript|ENSMUST00000171796.7|Coding|6/48|c.541C>T|p.(L181F)|660/86359|541/5094|181/1698||,A|non_coding_transcript_intron_variant|LOW|Kif1a|16560|transcript|ENSMUST00000188493.1|Noncoding|4/6|n.359+1617C>T||360/62804||||;allele_of_genes="MGI:108391";alleles="MGI:5749650";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.93076218G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2163242";strain_name="C3.NB-H2<p>_H2-T18<c?>/SnJ";symbol="Kif1a<sup>lgdg</sup>";symbol_text="Kif1a<lgdg>"
1 128588888 NC_000067.6:g.128588888_128588889delinsTC AG TC . . ANN=TC|mnv&stop_gained|HIGH|Cxcr4|12767|transcript|ENSMUST00000052172.6|Coding|2/2|c.1034_1035delCTinsGA|p.(S345*)|1115/4092|1034/1080|345/360||;allele_of_genes="MGI:109563";alleles="MGI:5301553";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.128588888_128588889delinsTC";impact="HIGH";soTerm="MNV";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Cxcr4<sup>tm1.1Bala</sup>";symbol_text="Cxcr4<tm1.1Bala>"
1 128589628 NC_000067.6:g.128589628C>T C T . . ANN=T|missense_variant|MODERATE|Cxcr4|12767|transcript|ENSMUST00000052172.6|Coding|2/2|c.295G>A|p.(D99N)|376/4092|295/1080|99/360||,T|missense_variant|MODERATE|Cxcr4|12767|transcript|ENSMUST00000142893.1|Coding|2/2|c.289G>A|p.(D97N)|373/3195|289/818|97/272||;allele_of_genes="MGI:109563";alleles="MGI:5297422";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.128589628C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cxcr4<sup>b2b220Clo</sup>";symbol_text="Cxcr4<b2b220Clo>"
1 132991741 NC_000067.6:g.132991741_132991742delinsGC CA GC . . ANN=GC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067398.12|Coding|11/11|c.1387_1388delTGinsGC|p.(C463A)|1526/34003|1387/1473|463/491||,GC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067429.9|Coding|12/12|c.1384_1385delTGinsGC|p.(C462A)|1593/35504|1384/1470|462/490||,GC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000188090.6|Coding|11/11|c.1384_1385delTGinsGC|p.(C462A)|1583/39197|1384/1470|462/490||,GC|coding_transcript_intron_variant|LOW|Mdm4|17248|transcript|ENSMUST00000186617.6|Coding|10/10|c.900+2761_900+2762delTGinsGC|p.(%3D)|1022/65855|901/957|301/319||,GC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000185398.6|Coding|11/11|c.*932_*933delTGinsGC|p.(%3D)|1495/34128|427/426|143/142||,GC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000191212.6|Coding|10/10|c.*932_*933delTGinsGC|p.(%3D)|1459/34956|388/387|130/129||;allele_of_genes="MGI:107934";alleles="MGI:5141749";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.132991741_132991742delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2160041";strain_name="129";symbol="Mdm4<sup>tm1Zmy</sup>";symbol_text="Mdm4<tm1Zmy>"
1 132991920 NC_000067.6:g.132991920_132991922delinsAGC GCT AGC . . ANN=AGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067398.12|Coding|11/11|c.1207_1209delAGCinsGCT|p.(S403A)|1346/34003|1207/1473|403/491||,AGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067429.9|Coding|12/12|c.1204_1206delAGCinsGCT|p.(S402A)|1413/35504|1204/1470|402/490||,AGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000188090.6|Coding|11/11|c.1204_1206delAGCinsGCT|p.(S402A)|1403/39197|1204/1470|402/490||,AGC|coding_transcript_intron_variant|LOW|Mdm4|17248|transcript|ENSMUST00000186617.6|Coding|10/10|c.900+2581_900+2583delAGCinsGCT|p.(%3D)|1022/65855|901/957|301/319||,AGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000185398.6|Coding|11/11|c.*752_*754delAGCinsGCT|p.(%3D)|1315/34128|427/426|143/142||,AGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000191212.6|Coding|10/10|c.*752_*754delAGCinsGCT|p.(%3D)|1279/34956|388/387|130/129||;allele_of_genes="MGI:107934";alleles="MGI:3850668";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.132991920_132991922delinsAGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Mdm4<sup>tm1.1Wahl</sup>";symbol_text="Mdm4<tm1.1Wahl>"
1 132992025 NC_000067.6:g.132992025_132992027delinsCGC TGA CGC . . ANN=CGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067398.12|Coding|11/11|c.1102_1104delTCAinsGCG|p.(S368A)|1241/34003|1102/1473|368/491||,CGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067429.9|Coding|12/12|c.1099_1101delTCAinsGCG|p.(S367A)|1308/35504|1099/1470|367/490||,CGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000188090.6|Coding|11/11|c.1099_1101delTCAinsGCG|p.(S367A)|1298/39197|1099/1470|367/490||,CGC|coding_transcript_intron_variant|LOW|Mdm4|17248|transcript|ENSMUST00000186617.6|Coding|10/10|c.900+2476_900+2478delTCAinsGCG|p.(%3D)|1022/65855|901/957|301/319||,CGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000185398.6|Coding|11/11|c.*647_*649delTCAinsGCG|p.(%3D)|1210/34128|427/426|143/142||,CGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000191212.6|Coding|10/10|c.*647_*649delTCAinsGCG|p.(%3D)|1174/34956|388/387|130/129||;allele_of_genes="MGI:107934";alleles="MGI:3850668";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.132992025_132992027delinsCGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Mdm4<sup>tm1.1Wahl</sup>";symbol_text="Mdm4<tm1.1Wahl>"
1 132992103 NC_000067.6:g.132992103_132992105delinsGGC AGA GGC . . ANN=GGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067398.12|Coding|11/11|c.1024_1026delTCTinsGCC|p.(S342A)|1163/34003|1024/1473|342/491||,GGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000067429.9|Coding|12/12|c.1021_1023delTCTinsGCC|p.(S341A)|1230/35504|1021/1470|341/490||,GGC|mnv|HIGH|Mdm4|17248|transcript|ENSMUST00000188090.6|Coding|11/11|c.1021_1023delTCTinsGCC|p.(S341A)|1220/39197|1021/1470|341/490||,GGC|coding_transcript_intron_variant|LOW|Mdm4|17248|transcript|ENSMUST00000186617.6|Coding|10/10|c.900+2398_900+2400delTCTinsGCC|p.(%3D)|1022/65855|901/957|301/319||,GGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000185398.6|Coding|11/11|c.*569_*571delTCTinsGCC|p.(%3D)|1132/34128|427/426|143/142||,GGC|3_prime_UTR_exon_variant|LOW|Mdm4|17248|transcript|ENSMUST00000191212.6|Coding|10/10|c.*569_*571delTCTinsGCC|p.(%3D)|1096/34956|388/387|130/129||;allele_of_genes="MGI:107934";alleles="MGI:3850668";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.132992103_132992105delinsGGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Mdm4<sup>tm1.1Wahl</sup>";symbol_text="Mdm4<tm1.1Wahl>"
1 138067885 NC_000067.6:g.138067885C>A C A . . ANN=A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Ptprc|19264|transcript|ENSMUST00000112036.4|Noncoding|24/25|n.3686+1G>T||3687/53581||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ptprc|19264|transcript|ENSMUST00000182283.7|Coding|28/29|c.3056+1G>T|p.?|3195/111900|3057/3465|1019/1155||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ptprc|19264|transcript|ENSMUST00000182755.7|Coding|27/28|c.2984+1G>T|p.?|3117/111881|2985/3393|995/1131||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ptprc|19264|transcript|ENSMUST00000183301.7|Coding|31/32|c.3473+1G>T|p.?|3573/111855|3474/3882|1158/1294||;allele_of_genes="MGI:97810";alleles="MGI:6305154";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000067.6:g.138067885C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ptprc<sup>M11Btlr</sup>";symbol_text="Ptprc<M11Btlr>"
1 138544242 NC_000067.6:g.138544242A>T A T . . ANN=T|stop_gained|HIGH|Nek7|59125|transcript|ENSMUST00000027642.4|Coding|3/8|c.159T>A|p.(C53*)|308/135563|159/606|53/202||,T|stop_gained|HIGH|Nek7|59125|transcript|ENSMUST00000186017.6|Coding|3/10|c.159T>A|p.(C53*)|383/136875|159/909|53/303||,T|stop_gained|HIGH|Nek7|59125|transcript|ENSMUST00000187407.6|Coding|3/10|c.159T>A|p.(C53*)|423/136305|159/909|53/303||,T|non_coding_transcript_exon_variant|LOW|Nek7|59125|transcript|ENSMUST00000191549.2|Noncoding|3/7|n.338T>A||338/105960||||,T|non_coding_transcript_intron_variant|LOW|Gm28501|.|transcript|ENSMUST00000188729.2|Noncoding|2/2|n.280-5626A>T||280/34395||||;allele_of_genes="MGI:1890645";alleles="MGI:5690178";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000067.6:g.138544242A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nek7<sup>M1Btlr</sup>";symbol_text="Nek7<M1Btlr>"
1 155812538 NC_000067.6:g.155812538T>C T C . . ANN=C|missense_variant|MODERATE|Qsox1|104009|transcript|ENSMUST00000035325.14|Coding|1/12|c.262A>G|p.(N88D)|352/34732|262/2247|88/749||,C|missense_variant|MODERATE|Qsox1|104009|transcript|ENSMUST00000111764.7|Coding|1/13|c.262A>G|p.(N88D)|314/34693|262/1986|88/662||,C|missense_variant|MODERATE|Qsox1|104009|transcript|ENSMUST00000194632.1|Coding|1/13|c.262A>G|p.(N88D)|307/34683|262/1707|88/569||,C|non_coding_transcript_exon_variant|LOW|Qsox1|104009|transcript|ENSMUST00000140809.1|Noncoding|1/2|n.301A>G||301/11392||||,C|non_coding_transcript_exon_variant|LOW|Qsox1|104009|transcript|ENSMUST00000151368.1|Noncoding|1/4|n.283A>G||283/18652||||;allele_of_genes="MGI:1330818";alleles="MGI:5615575";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.155812538T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Qsox1<sup>b2b2673Clo</sup>";symbol_text="Qsox1<b2b2673Clo>"
1 171159832 NC_000067.6:g.171159832C>T C T . . ANN=T|stop_gained&splice_region_variant|HIGH|Mpz|17528|transcript|ENSMUST00000070758.9|Coding|7/8|c.643C>T|p.(Q215*)|811/10420|643/747|215/249||,T|stop_gained&splice_region_variant|HIGH|Mpz|17528|transcript|ENSMUST00000111334.1|Coding|5/6|c.643C>T|p.(Q215*)|710/4993|643/747|215/249||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Mpz|17528|transcript|ENSMUST00000125565.1|Noncoding|1/2|n.130C>T||130/543||||,T|non_coding_transcript_intron_variant|LOW|Mpz|17528|transcript|ENSMUST00000149352.1|Noncoding|1/1|n.41-117C>T||41/637||||;allele_of_genes="MGI:103177";alleles="MGI:5824069";geneLevelConsequence="stop_gained,splice_region_variant";hgvs_nomenclature="NC_000067.6:g.171159832C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Mpz<sup>tm1.1Wra</sup>";symbol_text="Mpz<tm1.1Wra>"
1 171159945 NC_000067.6:g.171159947_171159951del CCAGTG C . . ANN=C|frameshift_truncation|HIGH|Mpz|17528|transcript|ENSMUST00000070758.9|Coding|8/8|c.651_655del|p.(L219Cfs*14)|819/10420|651/747|217/249||INFO_REALIGN_3_PRIME,C|frameshift_truncation|HIGH|Mpz|17528|transcript|ENSMUST00000111334.1|Coding|6/6|c.651_655del|p.(L219Cfs*14)|718/4993|651/747|217/249||INFO_REALIGN_3_PRIME,C|splice_acceptor_variant&non_coding_transcript_exon_variant|HIGH|Mpz|17528|transcript|ENSMUST00000149352.1|Noncoding||n.41-3_42del||41/637||||,C|non_coding_transcript_exon_variant|LOW|Mpz|17528|transcript|ENSMUST00000125565.1|Noncoding|2/2|n.138_142del||138/543||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:103177";alleles="MGI:3844951";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000067.6:g.171159947_171159951del";impact="HIGH";soTerm="deletion";strain_id="MGI:2162395";strain_name="B6.129P2-Nos3<tm1Unc>/J";symbol="Mpz<sup>ttrr</sup>";symbol_text="Mpz<ttrr>"
1 171159951 NC_000067.6:g.171159963_171159963delinsCTGTATGCCATGC C CTGTATGCCATGC . . ANN=CTGTATGCCATGC|inframe_insertion&direct_tandem_duplication|MODERATE|Mpz|17528|transcript|ENSMUST00000070758.9|Coding|8/8|c.658_669dup|p.(Y220_L223dup)|837/10420|669/747|223/249||INFO_REALIGN_3_PRIME,CTGTATGCCATGC|inframe_insertion&direct_tandem_duplication|MODERATE|Mpz|17528|transcript|ENSMUST00000111334.1|Coding|6/6|c.658_669dup|p.(Y220_L223dup)|736/4993|669/747|223/249||INFO_REALIGN_3_PRIME,CTGTATGCCATGC|non_coding_transcript_exon_variant|LOW|Mpz|17528|transcript|ENSMUST00000125565.1|Noncoding|2/2|n.145_156dup||156/543||||INFO_REALIGN_3_PRIME,CTGTATGCCATGC|non_coding_transcript_exon_variant|LOW|Mpz|17528|transcript|ENSMUST00000149352.1|Noncoding|2/2|n.46_57dup||57/637||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:103177";alleles="MGI:3844951";geneLevelConsequence="inframe_insertion";hgvs_nomenclature="NC_000067.6:g.171159963_171159963delinsCTGTATGCCATGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2162395";strain_name="B6.129P2-Nos3<tm1Unc>/J";symbol="Mpz<sup>ttrr</sup>";symbol_text="Mpz<ttrr>"
1 171280433 NC_000067.6:g.171280433_171280435delinsCCA TCG CCA . . ANN=CCA|mnv|HIGH|Ppox|19044|transcript|ENSMUST00000073120.10|Coding|3/13|c.175_177delCGAinsTGG|p.(R59W)|497/4195|175/1434|59/478||,CCA|mnv|HIGH|Ppox|19044|transcript|ENSMUST00000192956.2|Coding|2/9|c.175_177delCGAinsTGG|p.(R59W)|175/3314|175/1167|59/389||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000133050.1|Noncoding|2/2|n.534_536delCGAinsTGG||534/755||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000145019.1|Noncoding|1/3|n.88_90delCGAinsTGG||88/661||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000151442.1|Noncoding|3/3|n.497_499delCGAinsTGG||497/1078||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000152689.7|Noncoding|3/11|n.497_499delCGAinsTGG||497/4195||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000155083.7|Noncoding|3/8|n.497_499delCGAinsTGG||497/5197||||;allele_of_genes="MGI:104968,MGI:104968,MGI:104968,MGI:104968";alleles="MGI:5696597,MGI:5696597,MGI:5696597,MGI:5696597";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000067.6:g.171280433_171280435delinsCCA";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Ppox<sup>tm1Had</sup>";symbol_text="Ppox<tm1Had>"
1 171280433 NC_000067.6:g.171280433_171280435delinsCCA TCG CCA . . ANN=CCA|mnv|HIGH|Ppox|19044|transcript|ENSMUST00000073120.10|Coding|3/13|c.175_177delCGAinsTGG|p.(R59W)|497/4195|175/1434|59/478||,CCA|mnv|HIGH|Ppox|19044|transcript|ENSMUST00000192956.2|Coding|2/9|c.175_177delCGAinsTGG|p.(R59W)|175/3314|175/1167|59/389||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000133050.1|Noncoding|2/2|n.534_536delCGAinsTGG||534/755||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000145019.1|Noncoding|1/3|n.88_90delCGAinsTGG||88/661||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000151442.1|Noncoding|3/3|n.497_499delCGAinsTGG||497/1078||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000152689.7|Noncoding|3/11|n.497_499delCGAinsTGG||497/4195||||,CCA|non_coding_transcript_exon_variant|LOW|Ppox|19044|transcript|ENSMUST00000155083.7|Noncoding|3/8|n.497_499delCGAinsTGG||497/5197||||;allele_of_genes="MGI:104968,MGI:104968,MGI:104968,MGI:104968";alleles="MGI:5697201,MGI:5697201,MGI:5697201,MGI:5697201";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000067.6:g.171280433_171280435delinsCCA";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Ppox<sup>tm1.1Had</sup>";symbol_text="Ppox<tm1.1Had>"
1 171580788 NC_000067.6:g.171580788A>G A G . . ANN=G|missense_variant|MODERATE|Cd244a|18106|transcript|ENSMUST00000004829.12|Coding|7/9|c.1024A>G|p.(T342A)|1156/26126|1024/1194|342/398||,G|coding_transcript_intron_variant|LOW|Cd244a|18106|transcript|ENSMUST00000194797.1|Coding|5/6|c.921+2819A>G|p.(%3D)|1054/50554|922/939|308/313||,G|non_coding_transcript_exon_variant|LOW|Cd244a|18106|transcript|ENSMUST00000195804.1|Noncoding|2/4|n.139A>G||139/6256||||;allele_of_genes="MGI:109294";alleles="MGI:5491497";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000067.6:g.171580788A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cd244a<sup>Chip</sup>";symbol_text="Cd244a<Chip>"
2 32334795 NC_000068.7:g.32334795C>T C T . . ANN=T|missense_variant|MODERATE|Dnm1|13429|transcript|ENSMUST00000091089.11|Coding|10/21|c.1222G>A|p.(A408T)|1297/44814|1222/2595|408/865||,T|missense_variant|MODERATE|Dnm1|13429|transcript|ENSMUST00000113350.7|Coding|10/23|c.1222G>A|p.(A408T)|1315/44832|1222/2556|408/852||,T|missense_variant|MODERATE|Dnm1|13429|transcript|ENSMUST00000113352.8|Coding|10/22|c.1222G>A|p.(A408T)|1276/44793|1222/2556|408/852||,T|missense_variant|MODERATE|Dnm1|13429|transcript|ENSMUST00000113365.7|Coding|10/22|c.1222G>A|p.(A408T)|1351/44868|1222/2595|408/865||,T|missense_variant|MODERATE|Dnm1|13429|transcript|ENSMUST00000139624.7|Coding|10/23|c.1222G>A|p.(A408T)|1296/44813|1222/2604|408/868||,T|coding_transcript_intron_variant|LOW|Dnm1|.|transcript|ENSMUST00000202578.3|Coding|9/22|c.1196+981G>A|p.(%3D)|1290/43824|1197/2556|399/852||,T|coding_transcript_intron_variant|LOW|Dnm1|13429|transcript|ENSMUST00000078352.11|Coding|9/22|c.1196+981G>A|p.(%3D)|1278/44820|1197/2556|399/852||,T|coding_transcript_intron_variant|LOW|Dnm1|13429|transcript|ENSMUST00000201433.3|Coding|9/21|c.1196+981G>A|p.(%3D)|1222/44757|1197/2595|399/865||,T|coding_transcript_intron_variant|LOW|Dnm1|13429|transcript|ENSMUST00000201494.3|Coding|9/21|c.1196+981G>A|p.(%3D)|1258/44430|1197/2508|399/836||;allele_of_genes="MGI:107384";alleles="MGI:3033341";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.32334795C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnm1<sup>Ftfl</sup>";symbol_text="Dnm1<Ftfl>"
2 33566910 NC_000068.7:g.33566910A>T A T . . ANN=T|missense_variant|MODERATE|Lmx1b|16917|transcript|ENSMUST00000041730.10|Coding|5/8|c.725T>A|p.(V242D)|725/79547|725/1119|242/373||,T|missense_variant|MODERATE|Lmx1b|16917|transcript|ENSMUST00000176067.1|Coding|5/8|c.694T>A|p.(S232T)|694/76156|694/1109|232/369||;allele_of_genes="MGI:1100513";alleles="MGI:2178439";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.33566910A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159843";strain_name="BALB/cAnN";symbol="Lmx1b<sup>Icst</sup>";symbol_text="Lmx1b<Icst>"
2 35135546 NC_000068.7:g.35135546T>C T C . . ANN=C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000028237.14|Coding|13/44|c.1886T>C|p.(I629T)|2055/69331|1886/7005|629/2335||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000113032.7|Coding|13/44|c.1886T>C|p.(I629T)|1928/68804|1886/7002|629/2334||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000113033.5|Coding|3/9|c.227T>C|p.(I76T)|389/15414|227/1446|76/482||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000113034.7|Coding|3/18|c.227T>C|p.(I76T)|413/28403|227/2962|76/987||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000113037.9|Coding|3/34|c.227T>C|p.(I76T)|413/46589|227/5343|76/1781||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000123884.7|Coding|5/11|c.688T>C|p.(S230P)|688/20291|688/1907|230/635||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000150807.5|Coding|4/5|c.227T>C|p.(I76T)|533/5424|227/419|76/139||,C|missense_variant|MODERATE|Cntrl|26920|transcript|ENSMUST00000156933.7|Coding|13/43|c.1886T>C|p.(I629T)|2055/68619|1886/7005|629/2335||;allele_of_genes="MGI:1889576";alleles="MGI:5438058";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.35135546T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cntrl<sup>b2b1468.1Clo</sup>";symbol_text="Cntrl<b2b1468.1Clo>"
2 62268849 NC_000068.7:g.62268849T>C T C . . ANN=C|missense_variant|MODERATE|Slc4a10|94229|transcript|ENSMUST00000054484.14|Coding|14/25|c.1850T>C|p.(L617P)|1910/280146|1850/3321|617/1107||,C|missense_variant|MODERATE|Slc4a10|94229|transcript|ENSMUST00000102735.9|Coding|14/26|c.1850T>C|p.(L617P)|2033/280269|1850/3267|617/1089||,C|missense_variant|MODERATE|Slc4a10|94229|transcript|ENSMUST00000112480.2|Coding|15/27|c.1940T>C|p.(L647P)|1940/280086|1940/3357|647/1119||,C|non_coding_transcript_exon_variant|LOW|Slc4a10|94229|transcript|ENSMUST00000155219.7|Noncoding|15/27|n.2048T>C||2048/278239||||;allele_of_genes="MGI:2150150";alleles="MGI:5791987";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.62268849T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc4a10<sup>mpc96H</sup>";symbol_text="Slc4a10<mpc96H>"
2 66540317 NC_000068.7:g.66540317T>A T A . . ANN=A|missense_variant|MODERATE|Scn9a|20274|transcript|ENSMUST00000100063.8|Coding|13/28|c.1924A>T|p.(N642Y)|2471/154873|1924/5928|642/1976||,A|missense_variant|MODERATE|Scn9a|20274|transcript|ENSMUST00000100064.8|Coding|12/27|c.1918A>T|p.(N640Y)|2465/154873|1918/5955|640/1985||,A|missense_variant|MODERATE|Scn9a|20274|transcript|ENSMUST00000112354.2|Coding|12/27|c.1918A>T|p.(N640Y)|2166/151537|1918/5922|640/1974||,A|missense_variant|MODERATE|Scn9a|20274|transcript|ENSMUST00000164384.8|Coding|13/28|c.1918A>T|p.(N640Y)|2166/152563|1918/5955|640/1985||,A|missense_variant|MODERATE|Scn9a|20274|transcript|ENSMUST00000169900.7|Coding|13/28|c.1918A>T|p.(N640Y)|2166/152563|1918/5922|640/1974||,A|non_coding_transcript_exon_variant|LOW|Scn9a|20274|transcript|ENSMUST00000151234.1|Noncoding|2/2|n.460A>T||460/3161||||,A|non_coding_transcript_intron_variant|LOW|Gm13629|100038743|transcript|ENSMUST00000141149.7|Noncoding|2/2|n.536-5223T>A||536/105147||||;allele_of_genes="MGI:107636,MGI:107636";alleles="MGI:4367789,MGI:4367789";geneLevelConsequence="intron_variant,non_coding_transcript_variant,missense_variant";hgvs_nomenclature="NC_000068.7:g.66540317T>A";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Scn9a<sup>tm1.1Naas</sup>";symbol_text="Scn9a<tm1.1Naas>"
2 69478700 NC_000068.7:g.69478700T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Lrp2|14725|transcript|ENSMUST00000080953.11|Coding|44/78|c.8456-3A>G|p.?|8628/161726|8456/13983|2819/4661||;allele_of_genes="MGI:95794";alleles="MGI:5489925";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000068.7:g.69478700T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lrp2<sup>b2b1625.2Clo</sup>";symbol_text="Lrp2<b2b1625.2Clo>"
2 69483774 NC_000068.7:g.69483774A>T A T . . ANN=T|stop_gained|HIGH|Lrp2|14725|transcript|ENSMUST00000080953.11|Coding|39/79|c.6612T>A|p.(Y2204*)|6784/161726|6612/13983|2204/4661||;allele_of_genes="MGI:95794";alleles="MGI:5560499";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000068.7:g.69483774A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lrp2<sup>b2b2671Clo</sup>";symbol_text="Lrp2<b2b2671Clo>"
2 71235983 NC_000068.7:g.71235983C>T C T . . ANN=T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000081710.11|Coding|5/16|c.386C>T|p.(T129I)|636/51470|386/1839|129/613||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000100028.9|Coding|6/17|c.446C>T|p.(T149I)|546/50876|446/1899|149/633||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112136.1|Coding|7/18|c.464C>T|p.(T155I)|556/51312|464/1914|155/638||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112138.7|Coding|5/16|c.386C>T|p.(T129I)|483/51534|386/1839|129/613||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112139.7|Coding|5/16|c.386C>T|p.(T129I)|500/51554|386/1836|129/612||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112140.7|Coding|7/18|c.464C>T|p.(T155I)|578/51563|464/1917|155/639||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112142.7|Coding|6/17|c.446C>T|p.(T149I)|595/51593|446/1899|149/633||,T|missense_variant|MODERATE|Dync1i2|13427|transcript|ENSMUST00000112144.8|Coding|7/18|c.464C>T|p.(T155I)|576/51326|464/1917|155/639||,T|non_coding_transcript_exon_variant|LOW|Dync1i2|13427|transcript|ENSMUST00000137683.1|Noncoding|1/10|n.1185C>T||1185/25551||||,T|non_coding_transcript_exon_variant|LOW|Dync1i2|13427|transcript|ENSMUST00000141619.7|Noncoding|6/8|n.529C>T||529/35214||||;allele_of_genes="MGI:107750";alleles="MGI:5440332";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.71235983C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2683685";strain_name="BALB/cAnNCrl";symbol="Dync1i2<sup>m1H</sup>";symbol_text="Dync1i2<m1H>"
2 79454595 NC_000068.7:g.79454595T>A T A . . ANN=A|missense_variant|MODERATE|Neurod1|18012|transcript|ENSMUST00000041099.4|Coding|2/2|c.443A>T|p.(N148I)|655/4231|443/1074|148/358||,A|non_coding_transcript_intron_variant|LOW|Gm26755|.|transcript|ENSMUST00000180703.1|Noncoding|1/1|n.154+457T>A||155/7123||||,A|non_coding_transcript_intron_variant|LOW|Cerkl|228094|transcript|ENSMUST00000153602.7|Noncoding|1/10|n.235+1956A>T||236/118217||||;allele_of_genes="MGI:1339708";alleles="MGI:6114089";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.79454595T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Neurod1<sup>m1Btlr</sup>";symbol_text="Neurod1<m1Btlr>"
2 93668357 NC_000068.7:g.93668357A>T A T . . ANN=T|stop_gained&splice_region_variant|HIGH|Alx4|11695|transcript|ENSMUST00000042078.9|Coding|2/4|c.433A>T|p.(K145*)|708/38956|433/1200|145/400||,T|stop_gained&splice_region_variant|HIGH|Alx4|11695|transcript|ENSMUST00000111254.1|Coding|2/3|c.433A>T|p.(K145*)|704/38952|433/978|145/326||,T|coding_transcript_intron_variant|LOW|Ext2|14043|transcript|ENSMUST00000184931.7|Coding|11/11|c.1663-6676T>A|p.(%3D)|1976/161522|1663/1761|555/587||;allele_of_genes="MGI:108359,MGI:108359";alleles="MGI:5502864,MGI:5502864";geneLevelConsequence="stop_gained,splice_region_variant,intron_variant";hgvs_nomenclature="NC_000068.7:g.93668357A>T";impact="HIGH,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Alx4<sup>M1Yzcm</sup>";symbol_text="Alx4<M1Yzcm>"
2 93675369 NC_000068.7:g.93675369A>G A G . . ANN=G|missense_variant|MODERATE|Alx4|11695|transcript|ENSMUST00000042078.9|Coding|3/4|c.815A>G|p.(H272R)|1090/38956|815/1200|272/400||,G|missense_variant|MODERATE|Alx4|11695|transcript|ENSMUST00000111254.1|Coding|3/3|c.815A>G|p.(H272R)|1086/38952|815/978|272/326||,G|coding_transcript_intron_variant|LOW|Ext2|14043|transcript|ENSMUST00000184931.7|Coding|11/11|c.1663-13688T>C|p.(%3D)|1976/161522|1663/1761|555/587||;allele_of_genes="MGI:108359,MGI:108359";alleles="MGI:3774135,MGI:3774135";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000068.7:g.93675369A>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Alx4<sup>m1Btlr</sup>";symbol_text="Alx4<m1Btlr>"
2 109723478 NC_000068.7:g.109723478_109723480delinsATG GTC ATG . . ANN=ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000053317.11|Coding|2/2|c.100_102delGTCinsATG|p.(V34M)|737/52308|100/774|34/258||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111042.2|Coding|2/2|c.196_198delGTCinsATG|p.(V66M)|376/17625|196/870|66/290||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111043.8|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|310/32599|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111044.2|Coding|3/3|c.76_78delGTCinsATG|p.(V26M)|325/32539|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111045.8|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|444/33445|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111046.8|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|290/49976|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111047.8|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|513/51111|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111049.8|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|301/51111|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111050.9|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|436/34572|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000111051.9|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|596/51111|76/750|26/250||,ATG|mnv|HIGH|Bdnf|12064|transcript|ENSMUST00000176893.7|Coding|2/2|c.76_78delGTCinsATG|p.(V26M)|178/33981|76/750|26/250||;allele_of_genes="MGI:88145";alleles="MGI:3664862";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.109723478_109723480delinsATG";impact="MODERATE";soTerm="MNV";strain_id="MGI:2160041";strain_name="129";symbol="Bdnf<sup>tm1Flee</sup>";symbol_text="Bdnf<tm1Flee>"
2 118400653 NC_000068.7:g.118400653T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Eif2ak4|27103|transcript|ENSMUST00000005233.11|Coding|2/38|c.257+6T>C|p.?|349/86617|258/4947|86/1649||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Eif2ak4|27103|transcript|ENSMUST00000102527.9|Coding|2/37|c.24+6T>C|p.?|149/86120|25/4611|9/1537||,C|splice_region_variant&5_prime_UTR_intron_variant|LOW|Eif2ak4|27103|transcript|ENSMUST00000110872.7|Coding|2/37|c.-4+6T>C|p.(%3D)|149/86121|1/4584|1/1528||,C|splice_region_variant&5_prime_UTR_intron_variant|LOW|Eif2ak4|27103|transcript|ENSMUST00000110874.7|Coding|2/39|c.-293+6T>C|p.(%3D)|120/86388|1/4713|1/1571||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Eif2ak4|27103|transcript|ENSMUST00000110877.7|Coding|2/10|c.257+6T>C|p.?|349/39596|258/1962|86/654||;allele_of_genes="MGI:1353427";alleles="MGI:5049871";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000068.7:g.118400653T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Eif2ak4<sup>m1Btlr</sup>";symbol_text="Eif2ak4<m1Btlr>"
2 120482115 NC_000068.7:g.120482115T>A T A . . ANN=A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000028748.12|Coding|3/21|c.325T>A|p.(C109S)|387/27994|325/2130|109/710||,A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000028749.13|Coding|3/24|c.385T>A|p.(C129S)|679/41335|385/2466|129/822||,A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000090028.11|Coding|3/20|c.325T>A|p.(C109S)|337/27944|325/2214|109/738||,A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000110716.7|Coding|3/22|c.325T>A|p.(C109S)|389/27996|325/2274|109/758||,A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000110719.2|Coding|3/21|c.325T>A|p.(C109S)|331/27938|325/2358|109/786||,A|missense_variant|MODERATE|Capn3|12335|transcript|ENSMUST00000110721.7|Coding|3/21|c.385T>A|p.(C129S)|679/41335|385/2190|129/730||,A|non_coding_transcript_exon_variant|LOW|Capn3|12335|transcript|ENSMUST00000124129.7|Noncoding|6/25|n.462T>A||462/48755||||,A|non_coding_transcript_exon_variant|LOW|Capn3|12335|transcript|ENSMUST00000139336.7|Noncoding|3/21|n.331T>A||331/27539||||,A|non_coding_transcript_exon_variant|LOW|Capn3|12335|transcript|ENSMUST00000145993.7|Noncoding|6/24|n.462T>A||462/48895||||;allele_of_genes="MGI:107437";alleles="MGI:4829966";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.120482115T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Capn3<sup>tm1.1Hiso</sup>";symbol_text="Capn3<tm1.1Hiso>"
2 121207887 NC_000068.7:g.121207887G>T G T . . ANN=T|missense_variant|MODERATE|Trp53bp1|27223|transcript|ENSMUST00000110647.7|Coding|20/27|c.4319C>A|p.(A1440D)|4382/76504|4319/5760|1440/1920||,T|missense_variant|MODERATE|Trp53bp1|27223|transcript|ENSMUST00000110648.7|Coding|21/28|c.4469C>A|p.(A1490D)|4598/76570|4469/5910|1490/1970||,T|3_prime_UTR_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000147540.7|Coding|11/18|c.*1802C>A|p.(%3D)|2373/37756|572/571|191/190||,T|non_coding_transcript_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000132812.1|Noncoding|2/3|n.463C>A||463/3494||||,T|non_coding_transcript_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000135890.7|Noncoding|5/12|n.994C>A||994/18695||||;allele_of_genes="MGI:1351320";alleles="MGI:6113484";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.121207887G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trp53bp1<sup>m2Btlr</sup>";symbol_text="Trp53bp1<m2Btlr>"
2 121211313 NC_000068.7:g.121211313A>T A T . . ANN=T|missense_variant|MODERATE|Trp53bp1|27223|transcript|ENSMUST00000110647.7|Coding|18/27|c.3761T>A|p.(V1254D)|3824/76504|3761/5760|1254/1920||,T|missense_variant|MODERATE|Trp53bp1|27223|transcript|ENSMUST00000110648.7|Coding|18/28|c.3761T>A|p.(V1254D)|3890/76570|3761/5910|1254/1970||,T|3_prime_UTR_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000124554.1|Coding|2/4|c.*49T>A|p.(%3D)|194/12822|146/145|49/48||,T|3_prime_UTR_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000147540.7|Coding|8/18|c.*1094T>A|p.(%3D)|1665/37756|572/571|191/190||,T|non_coding_transcript_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000124411.7|Noncoding|3/4|n.690T>A||690/12388||||,T|non_coding_transcript_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000135890.7|Noncoding|2/12|n.286T>A||286/18695||||,T|non_coding_transcript_exon_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000140582.1|Noncoding|3/3|n.666T>A||666/7129||||;allele_of_genes="MGI:1351320";alleles="MGI:6113496";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.121211313A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trp53bp1<sup>m4Btlr</sup>";symbol_text="Trp53bp1<m4Btlr>"
2 121270319 NC_000068.7:g.121270319A>T A T . . ANN=T|coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000110647.7|Coding|2/26|c.193-10T>A|p.(%3D)|256/76504|193/5760|65/1920||,T|coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000110648.7|Coding|2/27|c.193-10T>A|p.(%3D)|322/76570|193/5910|65/1970||,T|coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000131245.1|Coding|2/15|c.193-10T>A|p.(%3D)|236/55179|193/3055|65/1018||,T|non_coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000124060.1|Noncoding|2/2|n.284+205T>A||285/1741||||,T|non_coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000136617.7|Noncoding|2/5|n.284-10T>A||284/14856||||,T|non_coding_transcript_intron_variant|LOW|Trp53bp1|27223|transcript|ENSMUST00000140285.7|Noncoding|2/3|n.276-10T>A||276/4050||||;allele_of_genes="MGI:1351320";alleles="MGI:6113492";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000068.7:g.121270319A>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trp53bp1<sup>m3Btlr</sup>";symbol_text="Trp53bp1<m3Btlr>"
2 122600744 NC_000068.7:g.122600744T>C T C . . ANN=C|missense_variant|MODERATE|Gatm|67092|transcript|ENSMUST00000028624.8|Coding|5/9|c.761A>G|p.(D254G)|848/16837|761/1272|254/424||;allele_of_genes="MGI:1914342";alleles="MGI:6113820";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.122600744T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gatm<sup>m1Btlr</sup>";symbol_text="Gatm<m1Btlr>"
2 125170699 NC_000068.7:g.125170699A>T A T . . ANN=T|missense_variant|MODERATE|Slc12a1|20495|transcript|ENSMUST00000028630.8|Coding|7/27|c.880A>T|p.(I294F)|1112/77403|880/3273|294/1091||,T|missense_variant|MODERATE|Slc12a1|20495|transcript|ENSMUST00000110494.8|Coding|7/27|c.880A>T|p.(I294F)|1207/77498|880/3273|294/1091||,T|missense_variant|MODERATE|Slc12a1|20495|transcript|ENSMUST00000110495.2|Coding|7/27|c.880A>T|p.(I294F)|1112/77400|880/3273|294/1091||;allele_of_genes="MGI:103150";alleles="MGI:3712283";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.125170699A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Slc12a1<sup>urehr3</sup>";symbol_text="Slc12a1<urehr3>"
2 126920313 NC_000068.7:g.126920313C>T C T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Sppl2a|66552|transcript|ENSMUST00000028844.10|Coding|7/14|c.842+5G>A|p.?|1066/42845|843/1572|281/524||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Sppl2a|66552|transcript|ENSMUST00000143700.1|Coding|1/9|c.28+5G>A|p.?|29/26082|29/760|10/253||,T|non_coding_transcript_exon_variant|LOW|Sppl2a|66552|transcript|ENSMUST00000125592.1|Noncoding|2/4|n.335G>A||335/8815||||;allele_of_genes="MGI:1913802";alleles="MGI:5806433";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000068.7:g.126920313C>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sppl2a<sup>m2Btlr</sup>";symbol_text="Sppl2a<m2Btlr>"
2 126923594 NC_000068.7:g.126923594A>G A G . . ANN=G|missense_variant|MODERATE|Sppl2a|66552|transcript|ENSMUST00000028844.10|Coding|6/15|c.607T>C|p.(S203P)|830/42845|607/1572|203/524||,G|non_coding_transcript_exon_variant|LOW|Sppl2a|66552|transcript|ENSMUST00000125592.1|Noncoding|1/4|n.95T>C||95/8815||||;allele_of_genes="MGI:1913802";alleles="MGI:5806432";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.126923594A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sppl2a<sup>m1Btlr</sup>";symbol_text="Sppl2a<m1Btlr>"
2 127804508 NC_000068.7:g.127804508C>T C T . . ANN=T|missense_variant|MODERATE|Bub1|12235|transcript|ENSMUST00000028858.7|Coding|22/25|c.2674G>A|p.(D892N)|2794/30744|2674/3180|892/1060||,T|non_coding_transcript_exon_variant|LOW|Bub1|12235|transcript|ENSMUST00000138624.1|Noncoding|2/2|n.582G>A||582/763||||;allele_of_genes="MGI:1100510";alleles="MGI:5478548";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.127804508C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Bub1<sup>tm3.1Jvd</sup>";symbol_text="Bub1<tm3.1Jvd>"
2 137096213 NC_000068.7:g.137096213C>T C T . . ANN=T|missense_variant|MODERATE|Jag1|16449|transcript|ENSMUST00000028735.7|Coding|6/26|c.866G>A|p.(G289D)|1253/35189|866/3657|289/1219||;allele_of_genes="MGI:1095416";alleles="MGI:2386949";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.137096213C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Jag1<sup>Mhdahtu</sup>";symbol_text="Jag1<Mhdahtu>"
2 155438018 NC_000068.7:g.155438020_155438031del ACCTCTGAGTCGC A . . ANN=A|disruptive_inframe_deletion|MODERATE|Ncoa6|56406|transcript|ENSMUST00000043126.11|Coding|2/14|c.65_76del|p.(G22_E25del)|206/50128|65/6210|22/2070||,A|disruptive_inframe_deletion|MODERATE|Ncoa6|56406|transcript|ENSMUST00000109669.7|Coding|2/6|c.65_76del|p.(G22_E25del)|208/20509|65/1560|22/520||,A|disruptive_inframe_deletion|MODERATE|Ncoa6|56406|transcript|ENSMUST00000109670.7|Coding|4/16|c.65_76del|p.(G22_E25del)|444/83142|65/6210|22/2070||,A|disruptive_inframe_deletion|MODERATE|Ncoa6|56406|transcript|ENSMUST00000123293.7|Coding|2/10|c.65_76del|p.0?|365/67062|65/4550|22/1516||,A|non_coding_transcript_exon_variant|LOW|Ncoa6|56406|transcript|ENSMUST00000134508.1|Noncoding|3/3|n.393_404del||393/35815||||;allele_of_genes="MGI:1929915";alleles="MGI:5607863";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000068.7:g.155438020_155438031del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3056279";strain_name="C57BL/6NJ";symbol="Ncoa6<sup>em1(IMPC)J</sup>";symbol_text="Ncoa6<em1(IMPC)J>"
2 155753584 NC_000068.7:g.155753584_155753585delinsGC CG GC . . ANN=GC|mnv|HIGH|Procr|19124|transcript|ENSMUST00000029140.11|Coding|2/4|c.307_308delCGinsGC|p.(R103A)|588/4355|307/729|103/243||,GC|mnv|HIGH|Procr|19124|transcript|ENSMUST00000132608.1|Coding|3/4|c.307_308delCGinsGC|p.(R103A)|397/3206|307/414|103/138||,GC|non_coding_transcript_exon_variant|LOW|Procr|19124|transcript|ENSMUST00000143493.1|Noncoding|2/3|n.361_362delCGinsGC||361/4125||||,GC|non_coding_transcript_exon_variant|LOW|Procr|19124|transcript|ENSMUST00000155095.1|Noncoding|3/3|n.367_368delCGinsGC||367/2646||||;allele_of_genes="MGI:104596";alleles="MGI:5775084";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.155753584_155753585delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Procr<sup>tm1.1Pcl</sup>";symbol_text="Procr<tm1.1Pcl>"
2 155965058 NC_000068.7:g.155965058C>T C T . . ANN=T|stop_gained|HIGH|Cep250|16328|transcript|ENSMUST00000039994.13|Coding|6/33|c.559C>T|p.(R187*)|764/42343|559/7305|187/2435||,T|stop_gained|HIGH|Cep250|16328|transcript|ENSMUST00000094421.10|Coding|6/34|c.559C>T|p.(R187*)|764/42343|559/7245|187/2415||,T|stop_gained|HIGH|Cep250|16328|transcript|ENSMUST00000109618.1|Coding|6/8|c.559C>T|p.(R187*)|728/11201|559/1017|187/339||,T|stop_gained|HIGH|Cep250|16328|transcript|ENSMUST00000109619.8|Coding|6/33|c.559C>T|p.(R187*)|759/42343|559/7308|187/2436||,T|stop_gained|HIGH|Cep250|16328|transcript|ENSMUST00000151569.7|Coding|6/15|c.559C>T|p.(R187*)|750/17874|559/2119|187/706||,T|non_coding_transcript_exon_variant|LOW|Cep250|16328|transcript|ENSMUST00000149905.7|Noncoding|6/23|n.864C>T||864/30156||||;allele_of_genes="MGI:108084";alleles="MGI:6356300";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000068.7:g.155965058C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Cep250<sup>tm1Jzb</sup>";symbol_text="Cep250<tm1Jzb>"
2 160365934 NC_000068.7:g.160365934T>C T C . . ANN=C|missense_variant|MODERATE|Mafb|16658|transcript|ENSMUST00000099126.4|Coding|1/1|c.743A>G|p.(N248S)|1132/3363|743/972|248/324||;allele_of_genes="MGI:104555";alleles="MGI:2157803";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.160365934T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651508";strain_name="(BALB/cJ_x_SJL/J)F1";symbol="Mafb<sup>m1Gsb</sup>";symbol_text="Mafb<m1Gsb>"
2 180196271 NC_000068.7:g.180196271T>C T C . . ANN=C|missense_variant|MODERATE|Lama5|16776|transcript|ENSMUST00000015791.5|Coding|22/79|c.2651A>G|p.(E884G)|2708/49487|2651/11157|884/3719||;allele_of_genes="MGI:105382";alleles="MGI:5792034";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000068.7:g.180196271T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lama5<sup>mpc205H</sup>";symbol_text="Lama5<mpc205H>"
2 180221358 NC_000068.7:g.180221358A>T A T . . ANN=T|stop_gained|HIGH|Lama5|16776|transcript|ENSMUST00000015791.5|Coding|2/79|c.333T>A|p.(C111*)|390/49487|333/11157|111/3719||;allele_of_genes="MGI:105382";alleles="MGI:5646299";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000068.7:g.180221358A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lama5<sup>b2b2966.1Clo</sup>";symbol_text="Lama5<b2b2966.1Clo>"
2 181670560 NC_000068.7:g.181670561_181670562del CAG C . . ANN=C|frameshift_truncation|HIGH|Sox18|20672|transcript|ENSMUST00000054491.5|Coding|2/2|c.775_776del|p.(L259Gfs*2)|894/1805|775/1134|259/378||;allele_of_genes="MGI:103559";alleles="MGI:1856136";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000068.7:g.181670561_181670562del";impact="HIGH";soTerm="deletion";strain_id="MGI:5649880";strain_name="(C57BL/6J_x_DBA/2J)F1";symbol="Sox18<sup>Ra-Op</sup>";symbol_text="Sox18<Ra-Op>"
2 181670638 NC_000068.7:g.181670639_181670640del GTC G . . ANN=G|frameshift_truncation|HIGH|Sox18|20672|transcript|ENSMUST00000054491.5|Coding|2/2|c.697_698del|p.(D233Lfs*13)|816/1805|697/1134|233/378||;allele_of_genes="MGI:103559";alleles="MGI:1889617";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000068.7:g.181670639_181670640del";impact="HIGH";soTerm="deletion";strain_id="MGI:5651422";strain_name="(C57BL/6J-A<w-J>_x_129P3/J)F1/J";symbol="Sox18<sup>Ragl</sup>";symbol_text="Sox18<Ragl>"
2 181670670 NC_000068.7:g.181670671_181670672del AGG A . . ANN=A|frameshift_truncation|HIGH|Sox18|20672|transcript|ENSMUST00000054491.5|Coding|2/2|c.665_666del|p.(A222Vfs*24)|784/1805|665/1134|222/378||;allele_of_genes="MGI:103559";alleles="MGI:1856135";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000068.7:g.181670671_181670672del";impact="HIGH";soTerm="deletion";strain_id="MGI:5651304";strain_name="Translocation_stock";symbol="Sox18<sup>Ra</sup>";symbol_text="Sox18<Ra>"
2 181670671 NC_000068.7:g.181670672_181670673del GGC G . . ANN=G|frameshift_truncation|HIGH|Sox18|20672|transcript|ENSMUST00000054491.5|Coding|2/2|c.664_665del|p.(A222Lfs*24)|783/1805|664/1134|222/378||;allele_of_genes="MGI:103559";alleles="MGI:1856385";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000068.7:g.181670672_181670673del";impact="HIGH";soTerm="deletion";strain_id="MGI:2159906";strain_name="C3H/HeSnJ";symbol="Sox18<sup>Ra-J</sup>";symbol_text="Sox18<Ra-J>"
2 181670726 NC_000068.7:g.181670726A>T A T . . ANN=T|stop_gained|HIGH|Sox18|20672|transcript|ENSMUST00000054491.5|Coding|2/2|c.611T>A|p.(L204*)|730/1805|611/1134|204/378||;allele_of_genes="MGI:103559";alleles="MGI:2682755";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000068.7:g.181670726A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Sox18<sup>Mhdadcc1</sup>";symbol_text="Sox18<Mhdadcc1>"
3 20012796 NC_000069.6:g.20012796A>T A T . . ANN=T|stop_gained|HIGH|Hps3|12807|transcript|ENSMUST00000012580.12|Coding|11/17|c.2001T>A|p.(C667*)|2051/39371|2001/3009|667/1003||,T|stop_gained|HIGH|Hps3|12807|transcript|ENSMUST00000108321.1|Coding|11/17|c.1605T>A|p.(C535*)|1642/39136|1605/2613|535/871||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000130171.7|Noncoding|10/16|n.2117T>A||2117/39330||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000137408.7|Noncoding|10/10|n.3122T>A||3122/22772||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000139446.1|Noncoding|1/6|n.135T>A||135/10608||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000141308.7|Noncoding|2/8|n.237T>A||237/17961||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000151752.7|Noncoding|10/11|n.2826T>A||2826/24075||||;allele_of_genes="MGI:2153839";alleles="MGI:5515383";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.20012796A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps3<sup>coa-3Btlr</sup>";symbol_text="Hps3<coa-3Btlr>"
3 20014089 NC_000069.6:g.20014089A>T A T . . ANN=T|stop_gained|HIGH|Hps3|12807|transcript|ENSMUST00000012580.12|Coding|10/17|c.1800T>A|p.(Y600*)|1850/39371|1800/3009|600/1003||,T|stop_gained|HIGH|Hps3|12807|transcript|ENSMUST00000108321.1|Coding|10/17|c.1404T>A|p.(Y468*)|1441/39136|1404/2613|468/871||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000130171.7|Noncoding|9/16|n.1916T>A||1916/39330||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000137408.7|Noncoding|10/10|n.1829T>A||1829/22772||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000141308.7|Noncoding|1/8|n.36T>A||36/17961||||,T|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000151752.7|Noncoding|10/11|n.1533T>A||1533/24075||||;allele_of_genes="MGI:2153839";alleles="MGI:3799709";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.20014089A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps3<sup>coa-Btlr</sup>";symbol_text="Hps3<coa-Btlr>"
3 20030796 NC_000069.6:g.20030796A>C A C . . ANN=C|missense_variant|MODERATE|Hps3|12807|transcript|ENSMUST00000012580.12|Coding|2/17|c.227T>G|p.(L76R)|277/39371|227/3009|76/1003||,C|coding_transcript_intron_variant|LOW|Hps3|12807|transcript|ENSMUST00000108321.1|Coding|1/16|c.218-387T>G|p.(%3D)|255/39136|218/2613|73/871||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000124808.7|Noncoding|2/9|n.264T>G||264/20353||||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000126644.7|Noncoding|2/9|n.258T>G||258/20076||||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000130171.7|Noncoding|2/16|n.242T>G||242/39330||||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000137408.7|Noncoding|2/10|n.256T>G||256/22772||||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000151752.7|Noncoding|2/11|n.264T>G||264/24075||||,C|non_coding_transcript_exon_variant|LOW|Hps3|12807|transcript|ENSMUST00000155121.1|Noncoding|2/7|n.256T>G||256/18931||||;allele_of_genes="MGI:2153839";alleles="MGI:5515379";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.20030796A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps3<sup>coa-2Btlr</sup>";symbol_text="Hps3<coa-2Btlr>"
3 33837877 NC_000069.6:g.33837877C>A C A . . ANN=A|stop_gained|HIGH|Ccdc39|51938|transcript|ENSMUST00000029222.7|Coding|4/20|c.445G>T|p.(E149*)|552/31940|445/2814|149/938||,A|non_coding_transcript_exon_variant|LOW|Ccdc39|51938|transcript|ENSMUST00000200277.4|Noncoding|4/12|n.433G>T||433/23889||||,A|non_coding_transcript_exon_variant|LOW|Ccdc39|51938|transcript|ENSMUST00000200300.4|Noncoding|4/13|n.552G>T||552/25654||||;allele_of_genes="MGI:1289263";alleles="MGI:5554444";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.33837877C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ccdc39<sup>b2b2025.1Clo</sup>";symbol_text="Ccdc39<b2b2025.1Clo>"
3 33839076 NC_000069.6:g.33839076A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ccdc39|51938|transcript|ENSMUST00000029222.7|Coding|3/19|c.357+2T>A|p.?|465/31940|358/2814|120/938||,T|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Ccdc39|51938|transcript|ENSMUST00000200277.4|Noncoding|3/11|n.345+2T>A||346/23889||||,T|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Ccdc39|51938|transcript|ENSMUST00000200300.4|Noncoding|3/12|n.464+2T>A||465/25654||||,T|non_coding_transcript_exon_variant|LOW|Ccdc39|51938|transcript|ENSMUST00000197230.1|Noncoding|3/3|n.475T>A||475/6317||||;allele_of_genes="MGI:1289263";alleles="MGI:5438066";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000069.6:g.33839076A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ccdc39<sup>b2b1735Clo</sup>";symbol_text="Ccdc39<b2b1735Clo>"
3 33844193 NC_000069.6:g.33844193A>T A T . . ANN=T|start_lost&missense_variant|HIGH|Ccdc39|51938|transcript|ENSMUST00000029222.7|Coding|1/20|c.2T>A|p.0?|109/31940|2/2814|1/938||,T|non_coding_transcript_exon_variant|LOW|Ccdc39|51938|transcript|ENSMUST00000197230.1|Noncoding|1/3|n.118T>A||118/6317||||,T|non_coding_transcript_exon_variant|LOW|Ccdc39|51938|transcript|ENSMUST00000200300.4|Noncoding|1/13|n.109T>A||109/25654||||;allele_of_genes="MGI:1289263";alleles="MGI:5316786";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000069.6:g.33844193A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ccdc39<sup>b2b1304Clo</sup>";symbol_text="Ccdc39<b2b1304Clo>"
3 37064300 NC_000069.6:g.37064301_37064330del GGATATTCCTCTGAAAGTTGTAGTCTGTCGA G . . ANN=G|disruptive_inframe_deletion|MODERATE|Adad1|21744|transcript|ENSMUST00000029274.13|Coding|2/12|c.59_88del|p.(G20_N30delinsD)|205/47882|59/1647|20/549||,G|disruptive_inframe_deletion|MODERATE|Adad1|21744|transcript|ENSMUST00000144629.7|Coding|2/12|c.239_268del|p.(G80_N90delinsD)|435/48986|239/1860|80/620||,G|non_coding_transcript_exon_variant|LOW|Adad1|21744|transcript|ENSMUST00000141736.1|Noncoding|2/4|n.284_313del||284/3679||||;allele_of_genes="MGI:103258";alleles="MGI:5616653";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000069.6:g.37064301_37064330del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3056279";strain_name="C57BL/6NJ";symbol="Adad1<sup>em1(IMPC)J</sup>";symbol_text="Adad1<em1(IMPC)J>"
3 40805395 NC_000069.6:g.40805395T>A T A . . ANN=A|missense_variant|MODERATE|Plk4|20873|transcript|ENSMUST00000026858.10|Coding|5/16|c.725T>A|p.(I242N)|960/16865|725/2778|242/926||,A|missense_variant|MODERATE|Plk4|20873|transcript|ENSMUST00000167556.6|Coding|5/16|c.725T>A|p.(I242N)|725/16164|725/2769|242/923||,A|missense_variant|MODERATE|Plk4|20873|transcript|ENSMUST00000203295.2|Coding|5/16|c.725T>A|p.(I242N)|925/16830|725/2697|242/899||,A|3_prime_UTR_exon_variant|LOW|Plk4|20873|transcript|ENSMUST00000203895.2|Coding|5/16|c.*280T>A|p.(%3D)|933/16710|442/441|148/147||,A|non_coding_transcript_exon_variant|LOW|Plk4|20873|transcript|ENSMUST00000203320.1|Noncoding|5/5|n.929T>A||929/6016||||,A|non_coding_transcript_exon_variant|LOW|Plk4|20873|transcript|ENSMUST00000204594.2|Noncoding|5/6|n.951T>A||951/8386||||;allele_of_genes="MGI:101783";alleles="MGI:5296670";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.40805395T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Plk4<sup>m1Lja</sup>";symbol_text="Plk4<m1Lja>"
3 53544292 NC_000069.6:g.53544292T>C T C . . ANN=C|missense_variant|MODERATE|Frem2|242022|transcript|ENSMUST00000091137.5|Coding|11/24|c.6875A>G|p.(Y2292C)|7146/143418|6875/9483|2292/3161||;allele_of_genes="MGI:2444465";alleles="MGI:5429852";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.53544292T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Frem2<sup>b2b1562Clo</sup>";symbol_text="Frem2<b2b1562Clo>"
3 53544428 NC_000069.6:g.53544428A>C A C . . ANN=C|missense_variant|MODERATE|Frem2|242022|transcript|ENSMUST00000091137.5|Coding|11/24|c.6739T>G|p.(F2247V)|7010/143418|6739/9483|2247/3161||;allele_of_genes="MGI:2444465";alleles="MGI:5618918";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.53544428A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Frem2<sup>b2b3270Clo</sup>";symbol_text="Frem2<b2b3270Clo>"
3 54372106 NC_000069.6:g.54372106G>T G T . . ANN=T|missense_variant|MODERATE|Postn|.|transcript|ENSMUST00000081564.12|Coding|8/23|c.1004G>T|p.(C335F)|1004/29310|1004/2517|335/839||,T|missense_variant|MODERATE|Postn|50706|transcript|ENSMUST00000073012.12|Coding|8/22|c.1004G>T|p.(C335F)|1022/29910|1004/2436|335/812||,T|missense_variant|MODERATE|Postn|50706|transcript|ENSMUST00000107985.9|Coding|8/22|c.1004G>T|p.(C335F)|1038/29929|1004/2433|335/811||,T|missense_variant|MODERATE|Postn|50706|transcript|ENSMUST00000117373.7|Coding|8/21|c.1004G>T|p.(C335F)|1038/29926|1004/2352|335/784||;allele_of_genes="MGI:1926321";alleles="MGI:6304299";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.54372106G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Postn<sup>m1Btlr</sup>";symbol_text="Postn<m1Btlr>"
3 83766690 NC_000069.6:g.83766690G>T G T . . ANN=T|missense_variant|MODERATE|Sfrp2|20319|transcript|ENSMUST00000029625.7|Coding|1/3|c.149G>T|p.(C50F)|370/7996|149/888|50/296||,T|non_coding_transcript_exon_variant|LOW|Sfrp2|20319|transcript|ENSMUST00000140261.7|Noncoding|1/3|n.126G>T||126/3579||||;allele_of_genes="MGI:108078";alleles="MGI:3056485";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.83766690G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5655836";strain_name="(C3H/HeH_x_BALB/c)F1";symbol="Sfrp2<sup>C50F</sup>";symbol_text="Sfrp2<C50F>"
3 86350304 NC_000069.6:g.86350304C>T C T . . ANN=T|stop_gained|HIGH|Lrba|80877|transcript|ENSMUST00000107635.6|Coding|24/57|c.3874C>T|p.(Q1292*)|4169/558010|3874/8565|1292/2855||,T|stop_gained|HIGH|Lrba|80877|transcript|ENSMUST00000192145.5|Coding|24/51|c.3874C>T|p.(Q1292*)|4169/522033|3874/7734|1292/2578||,T|stop_gained|HIGH|Lrba|80877|transcript|ENSMUST00000194759.5|Coding|24/55|c.3874C>T|p.(Q1292*)|4169/552277|3874/8373|1292/2791||,T|stop_gained|HIGH|Lrba|80877|transcript|ENSMUST00000212390.1|Coding|23/39|c.3874C>T|p.(Q1292*)|3874/317423|3874/6372|1292/2124||;allele_of_genes="MGI:1933162";alleles="MGI:6303944";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.86350304C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lrba<sup>m1Btlr</sup>";symbol_text="Lrba<m1Btlr>"
3 88448076 NC_000069.6:g.88448076A>C A C . . ANN=C|missense_variant|MODERATE|Sema4a|20351|transcript|ENSMUST00000029700.11|Coding|10/15|c.1049T>G|p.(F350C)|1270/19781|1049/2283|350/761||,C|missense_variant|MODERATE|Sema4a|20351|transcript|ENSMUST00000107531.7|Coding|8/13|c.653T>G|p.(F218C)|965/19736|653/1887|218/629||,C|missense_variant|MODERATE|Sema4a|20351|transcript|ENSMUST00000165898.7|Coding|10/15|c.1049T>G|p.(F350C)|1193/23140|1049/2283|350/761||,C|missense_variant|MODERATE|Sema4a|20351|transcript|ENSMUST00000166237.7|Coding|10/15|c.1049T>G|p.(F350C)|1114/25221|1049/2283|350/761||,C|missense_variant|MODERATE|Sema4a|20351|transcript|ENSMUST00000169222.7|Coding|10/15|c.1049T>G|p.(F350C)|1152/22923|1049/2283|350/761||,C|non_coding_transcript_exon_variant|LOW|Sema4a|20351|transcript|ENSMUST00000135539.7|Noncoding|1/6|n.555T>G||555/12669||||,C|non_coding_transcript_exon_variant|LOW|Sema4a|20351|transcript|ENSMUST00000149145.1|Noncoding|2/7|n.425T>G||425/14077||||;allele_of_genes="MGI:107560";alleles="MGI:5548203";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.88448076A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Sema4a<sup>tm3.1Akum</sup>";symbol_text="Sema4a<tm3.1Akum>"
3 89379996 NC_000069.6:g.89379996T>C T C . . ANN=C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Zbtb7b|22724|transcript|ENSMUST00000029677.8|Coding|2/2|c.1167-2A>G|p.?|1501/15719|1167/1635|389/545||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Zbtb7b|22724|transcript|ENSMUST00000107432.7|Coding|2/2|c.1167-2A>G|p.?|1289/14426|1167/1635|389/545||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Zbtb7b|22724|transcript|ENSMUST00000107433.7|Coding|2/2|c.1167-2A>G|p.?|1300/9546|1167/1635|389/545||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Zbtb7b|22724|transcript|ENSMUST00000107435.7|Coding|3/3|c.1167-2A>G|p.?|1983/10028|1167/1635|389/545||;allele_of_genes="MGI:102755";alleles="MGI:3530739";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000069.6:g.89379996T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5653768";strain_name="mixed";symbol="Zbtb7b<sup>hd</sup>";symbol_text="Zbtb7b<hd>"
3 89381205 NC_000069.6:g.89381205A>C A C . . ANN=C|stop_lost&missense_variant|HIGH|Zbtb7b|22724|transcript|ENSMUST00000148361.7|Coding|3/3|c.305T>G|p.(L102Rext*-102)|480/12175|305/306|102/102||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000029677.8|Coding|2/3|c.305T>G|p.(L102R)|639/15719|305/1635|102/545||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000107432.7|Coding|2/3|c.305T>G|p.(L102R)|427/14426|305/1635|102/545||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000107433.7|Coding|2/3|c.305T>G|p.(L102R)|438/9546|305/1635|102/545||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000107435.7|Coding|3/4|c.305T>G|p.(L102R)|1121/10028|305/1635|102/545||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000126027.7|Coding|3/3|c.305T>G|p.(L102R)|477/12541|305/372|102/124||,C|missense_variant|MODERATE|Zbtb7b|22724|transcript|ENSMUST00000142119.1|Coding|3/3|c.305T>G|p.(L102R)|372/12169|305/336|102/112||;allele_of_genes="MGI:102755";alleles="MGI:3838356";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.89381205A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3716633";strain_name="C57BL/6JApb";symbol="Zbtb7b<sup>hpls</sup>";symbol_text="Zbtb7b<hpls>"
3 94377609 NC_000069.6:g.94377609T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Rorc|19885|transcript|ENSMUST00000197040.4|Coding|1/9|c.7+6T>C|p.?|173/20845|8/1488|3/496||,C|splice_region_variant&non_coding_transcript_intron_variant|LOW|Rorc|19885|transcript|ENSMUST00000198793.1|Noncoding|1/9|n.144+6T>C||145/20187||||,C|splice_region_variant&5_prime_UTR_intron_variant|LOW|Rorc|19885|transcript|ENSMUST00000200009.1|Coding|1/6|c.-117+6T>C|p.(%3D)|89/20133|1/1044|1/348||,C|coding_transcript_intron_variant|LOW|Rorc|19885|transcript|ENSMUST00000029795.9|Coding|2/10|c.70+2545T>C|p.(%3D)|169/25047|71/1551|24/517||;allele_of_genes="MGI:104856";alleles="MGI:5523975";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000069.6:g.94377609T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorc<sup>m1Btlr</sup>";symbol_text="Rorc<m1Btlr>"
3 94387193 NC_000069.6:g.94387193G>A G A . . ANN=A|missense_variant|MODERATE|Rorc|19885|transcript|ENSMUST00000029795.9|Coding|3/11|c.143G>A|p.(C48Y)|241/25047|143/1551|48/517||,A|missense_variant|MODERATE|Rorc|19885|transcript|ENSMUST00000197040.4|Coding|2/10|c.80G>A|p.(C27Y)|245/20845|80/1488|27/496||,A|missense_variant|MODERATE|Rorc|19885|transcript|ENSMUST00000200009.1|Coding|3/7|c.98G>A|p.(C33Y)|302/20133|98/1044|33/348||,A|non_coding_transcript_exon_variant|LOW|Rorc|19885|transcript|ENSMUST00000198793.1|Noncoding|2/10|n.217G>A||217/20187||||;allele_of_genes="MGI:104856";alleles="MGI:5789592";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.94387193G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorc<sup>m3Btlr</sup>";symbol_text="Rorc<m3Btlr>"
3 94388789 NC_000069.6:g.94388789_94388794delinsGCTGCA AGTCT GCTGC . . ANN=GCTGC|mnv|HIGH|Rorc|19885|transcript|ENSMUST00000029795.9|Coding|5/11|c.337_341delAGTCTinsGCTGC|p.(S113_L114delinsAA)|435/25047|337/1551|113/517||,GCTGC|mnv|HIGH|Rorc|19885|transcript|ENSMUST00000197040.4|Coding|4/10|c.274_278delAGTCTinsGCTGC|p.(S92_L93delinsAA)|439/20845|274/1488|92/496||,GCTGC|mnv|HIGH|Rorc|19885|transcript|ENSMUST00000200009.1|Coding|5/7|c.292_296delAGTCTinsGCTGC|p.(S98_L99delinsAA)|496/20133|292/1044|98/348||,GCTGC|non_coding_transcript_exon_variant|LOW|Rorc|19885|transcript|ENSMUST00000198793.1|Noncoding|4/10|n.411_415delAGTCTinsGCTGC||411/20187||||;allele_of_genes="MGI:104856";alleles="MGI:6095621";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.94388789_94388794delinsGCTGCA";impact="MODERATE";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Rorc<sup>tm1.1Zsun</sup>";symbol_text="Rorc<tm1.1Zsun>"
3 94397302 NC_000069.6:g.94397302T>A T A . . ANN=A|stop_gained|HIGH|Rorc|19885|transcript|ENSMUST00000029795.9|Coding|11/11|c.1500T>A|p.(Y500*)|1598/25047|1500/1551|500/517||,A|stop_gained|HIGH|Rorc|19885|transcript|ENSMUST00000197040.4|Coding|10/10|c.1437T>A|p.(Y479*)|1602/20845|1437/1488|479/496||,A|stop_gained|HIGH|Rorc|19885|transcript|ENSMUST00000200009.1|Coding|7/7|c.993T>A|p.(Y331*)|1197/20133|993/1044|331/348||,A|non_coding_transcript_exon_variant|LOW|Rorc|19885|transcript|ENSMUST00000198793.1|Noncoding|10/10|n.2248T>A||2248/20187||||,A|non_coding_transcript_intron_variant|LOW|Gm43401|.|transcript|ENSMUST00000198829.1|Noncoding|1/1|n.80-4017A>T||80/9878||||;allele_of_genes="MGI:104856";alleles="MGI:5615712";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.94397302T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorc<sup>m2Btlr</sup>";symbol_text="Rorc<m2Btlr>"
3 96247243 NC_000069.6:g.96247243A>C A C . . ANN=C|missense_variant|MODERATE|Hist2h3c1|15077|transcript|ENSMUST00000176059.1|Coding|1/1|c.358A>C|p.(I120L)|559/1820|358/411|120/137||,C|missense_variant|MODERATE|Hist2h3c1|15077|transcript|ENSMUST00000177796.1|Coding|1/1|c.493A>C|p.(I165L)|559/1825|493/546|165/182||,C|non_coding_transcript_exon_variant|LOW|Gm20634|15077|transcript|ENSMUST00000090779.3|Noncoding|1/1|n.1690A>C||1690/2956||||;allele_of_genes="MGI:2448355";alleles="MGI:6342045";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.96247243A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="H3c14<sup>Aey69</sup>";symbol_text="H3c14<Aey69>"
3 96919732 NC_000069.6:g.96919732G>C G C . . ANN=C|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.613C>G|p.(R205G)|774/12455|613/1323|205/441||,C|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14343G>C|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:5489751,MGI:5489751";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000069.6:g.96919732G>C";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:5658741";strain_name="CWXS/Agl";symbol="Gja8<sup>R205G</sup>";symbol_text="Gja8<R205G>"
3 96920154 NC_000069.6:g.96920154A>G A G . . ANN=G|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.191T>C|p.(V64A)|352/12455|191/1323|64/441||,G|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14765A>G|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:2429652,MGI:2429652";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.96920154A>G";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Gja8<sup>Aey5</sup>";symbol_text="Gja8<Aey5>"
3 96920197 NC_000069.6:g.96920197A>G A G . . ANN=G|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.148T>C|p.(S50P)|309/12455|148/1323|50/441||,G|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14808A>G|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:3774321,MGI:3774321";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000069.6:g.96920197A>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gja8<sup>L1</sup>";symbol_text="Gja8<L1>"
3 96920205 NC_000069.6:g.96920205T>G T G . . ANN=G|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.140A>C|p.(D47A)|301/12455|140/1323|47/441||,G|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14816T>G|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:1857499,MGI:1857499";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.96920205T>G";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:5652229";strain_name="(101_x_C3H)F1";symbol="Gja8<sup>No2</sup>";symbol_text="Gja8<No2>"
3 96920274 NC_000069.6:g.96920274A>G A G . . ANN=G|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.71T>C|p.(V24A)|232/12455|71/1323|24/441||,G|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14885A>G|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:6342052,MGI:6342052";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000069.6:g.96920274A>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Gja8<sup>Aey69</sup>";symbol_text="Gja8<Aey69>"
3 96920281 NC_000069.6:g.96920281C>G C G . . ANN=G|missense_variant|MODERATE|Gja8|14616|transcript|ENSMUST00000062944.6|Coding|2/2|c.64G>C|p.(G22R)|225/12455|64/1323|22/441||,G|5_prime_UTR_intron_variant|LOW|Gja5|14613|transcript|ENSMUST00000199597.1|Coding|1/3|c.-147+14892C>G|p.(%3D)|698/172724|1/1107|1/369||;allele_of_genes="MGI:99953,MGI:99953";alleles="MGI:1861479,MGI:1861479";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000069.6:g.96920281C>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:5651431";strain_name="BALB/cJ_x_AKR/J";symbol="Gja8<sup>Lop10</sup>";symbol_text="Gja8<Lop10>"
3 99204536 NC_000069.6:g.99204536G>T G T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Wars2|70560|transcript|ENSMUST00000004343.6|Coding|3/6|c.349G>T|p.(V117L)|380/79136|349/1083|117/361||,T|missense_variant&splice_region_variant|MODERATE|Wars2|70560|transcript|ENSMUST00000135960.7|Coding|3/7|c.349G>T|p.(V117L)|376/78132|349/528|117/176||,T|missense_variant&splice_region_variant|MODERATE|Wars2|70560|transcript|ENSMUST00000145650.7|Coding|3/9|c.349G>T|p.(V117L)|355/98094|349/567|117/189||,T|missense_variant&splice_region_variant|MODERATE|Wars2|70560|transcript|ENSMUST00000198044.1|Coding|2/4|c.91G>T|p.(V31L)|94/75506|91/321|31/107||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Wars2|70560|transcript|ENSMUST00000126875.1|Noncoding|3/4|n.283G>T||283/64363||||;allele_of_genes="MGI:1917810";alleles="MGI:5791998";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000069.6:g.99204536G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Wars2<sup>mpc151H</sup>";symbol_text="Wars2<mpc151H>"
3 103860404 NC_000069.6:g.103860404_103860407delinsCTGC ATGG CTGC . . ANN=CTGC|start_lost|HIGH|Ptpn22|19260|transcript|ENSMUST00000029433.8|Coding|1/21|c.1_4delATGGinsCTGC|p.0?|128/51971|1/2409|1/803||,CTGC|start_lost|HIGH|Ptpn22|19260|transcript|ENSMUST00000146071.7|Coding|3/23|c.1_4delATGGinsCTGC|p.0?|153/52450|1/2148|1/716||;allele_of_genes="MGI:107170";alleles="MGI:3043477";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000069.6:g.103860404_103860407delinsCTGC";impact="HIGH";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Ptpn22<sup>tm2Achn</sup>";symbol_text="Ptpn22<tm2Achn>"
3 103888559 NC_000069.6:g.103888559C>T C T . . ANN=T|missense_variant|MODERATE|Ptpn22|19260|transcript|ENSMUST00000029433.8|Coding|14/21|c.1855C>T|p.(R619W)|1982/51971|1855/2409|619/803||,T|missense_variant|MODERATE|Ptpn22|19260|transcript|ENSMUST00000146071.7|Coding|16/23|c.1855C>T|p.(R619W)|2007/52450|1855/2148|619/716||,T|non_coding_transcript_exon_variant|LOW|Ptpn22|19260|transcript|ENSMUST00000198701.4|Noncoding|2/5|n.318C>T||318/17314||||;allele_of_genes="MGI:107170,MGI:107170,MGI:107170,MGI:107170";alleles="MGI:5516594,MGI:5516594,MGI:5516594,MGI:5516594";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.103888559C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Ptpn22<sup>tm1.1Draw</sup>";symbol_text="Ptpn22<tm1.1Draw>"
3 103888559 NC_000069.6:g.103888559C>T C T . . ANN=T|missense_variant|MODERATE|Ptpn22|19260|transcript|ENSMUST00000029433.8|Coding|14/21|c.1855C>T|p.(R619W)|1982/51971|1855/2409|619/803||,T|missense_variant|MODERATE|Ptpn22|19260|transcript|ENSMUST00000146071.7|Coding|16/23|c.1855C>T|p.(R619W)|2007/52450|1855/2148|619/716||,T|non_coding_transcript_exon_variant|LOW|Ptpn22|19260|transcript|ENSMUST00000198701.4|Noncoding|2/5|n.318C>T||318/17314||||;allele_of_genes="MGI:107170,MGI:107170,MGI:107170,MGI:107170";alleles="MGI:5294241,MGI:5294241,MGI:5294241,MGI:5294241";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.103888559C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Ptpn22<sup>tm1.1Kas</sup>";symbol_text="Ptpn22<tm1.1Kas>"
3 107105027 NC_000069.6:g.107105027C>A C A . . ANN=A|missense_variant|MODERATE|Kcna2|16490|transcript|ENSMUST00000038695.5|Coding|3/3|c.923C>A|p.(S308Y)|1604/13439|923/1500|308/500||,A|missense_variant|MODERATE|Kcna2|16490|transcript|ENSMUST00000196403.1|Coding|3/3|c.923C>A|p.(S308Y)|1486/3290|923/1500|308/500||,A|missense_variant|MODERATE|Kcna2|16490|transcript|ENSMUST00000197470.4|Coding|3/3|c.923C>A|p.(S308Y)|1660/6592|923/1500|308/500||;allele_of_genes="MGI:96659";alleles="MGI:6304409";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.107105027C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kcna2<sup>m1Btlr</sup>";symbol_text="Kcna2<m1Btlr>"
3 115711821 NC_000069.6:g.115711821_115711824delinsCCGC ACGA CCGC . . ANN=CCGC|mnv|HIGH|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1120_1123delTCGTinsGCGG|p.(S374_S375delinsAA)|1655/4640|1120/1149|374/383||;allele_of_genes="MGI:1096355,MGI:1096355,MGI:1096355,MGI:1096355";alleles="MGI:5295050,MGI:5295050,MGI:5295050,MGI:5295050";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.115711821_115711824delinsCCGC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="S1pr1<sup>tm1Cys</sup>";symbol_text="S1pr1<tm1Cys>"
3 115711821 NC_000069.6:g.115711821_115711824delinsCCGC ACGA CCGC . . ANN=CCGC|mnv|HIGH|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1120_1123delTCGTinsGCGG|p.(S374_S375delinsAA)|1655/4640|1120/1149|374/383||;allele_of_genes="MGI:1096355,MGI:1096355,MGI:1096355,MGI:1096355";alleles="MGI:5295051,MGI:5295051,MGI:5295051,MGI:5295051";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.115711821_115711824delinsCCGC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="S1pr1<sup>tm1.1Cys</sup>";symbol_text="S1pr1<tm1.1Cys>"
3 115711833 NC_000069.6:g.115711833T>C T C . . ANN=C|missense_variant|MODERATE|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1111A>G|p.(T371A)|1646/4640|1111/1149|371/383||;allele_of_genes="MGI:1096355,MGI:1096355,MGI:1096355,MGI:1096355";alleles="MGI:5295050,MGI:5295050,MGI:5295050,MGI:5295050";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.115711833T>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="S1pr1<sup>tm1Cys</sup>";symbol_text="S1pr1<tm1Cys>"
3 115711833 NC_000069.6:g.115711833T>C T C . . ANN=C|missense_variant|MODERATE|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1111A>G|p.(T371A)|1646/4640|1111/1149|371/383||;allele_of_genes="MGI:1096355,MGI:1096355,MGI:1096355,MGI:1096355";alleles="MGI:5295051,MGI:5295051,MGI:5295051,MGI:5295051";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000069.6:g.115711833T>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="S1pr1<sup>tm1.1Cys</sup>";symbol_text="S1pr1<tm1.1Cys>"
3 115711869 NC_000069.6:g.115711869_115711872delinsCGGC AGGA CGGC . . ANN=CGGC|mnv|HIGH|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1072_1075delTCCTinsGCCG|p.(S358_S359delinsAA)|1607/4640|1072/1149|358/383||;allele_of_genes="MGI:1096355";alleles="MGI:4822471";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.115711869_115711872delinsCGGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5654685";strain_name="(129S6/SvEvTac_x_C57BL/6)F1";symbol="S1pr1<sup>tm1.1Thla</sup>";symbol_text="S1pr1<tm1.1Thla>"
3 115711881 NC_000069.6:g.115711881A>C A C . . ANN=C|missense_variant|MODERATE|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1063T>G|p.(S355A)|1598/4640|1063/1149|355/383||;allele_of_genes="MGI:1096355";alleles="MGI:4822471";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.115711881A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5654685";strain_name="(129S6/SvEvTac_x_C57BL/6)F1";symbol="S1pr1<sup>tm1.1Thla</sup>";symbol_text="S1pr1<tm1.1Thla>"
3 115711886 NC_000069.6:g.115711886_115711887delinsGC CT GC . . ANN=GC|mnv|HIGH|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1057_1058delAGinsGC|p.(S353A)|1592/4640|1057/1149|353/383||;allele_of_genes="MGI:1096355";alleles="MGI:4822471";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.115711886_115711887delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5654685";strain_name="(129S6/SvEvTac_x_C57BL/6)F1";symbol="S1pr1<sup>tm1.1Thla</sup>";symbol_text="S1pr1<tm1.1Thla>"
3 115711892 NC_000069.6:g.115711892_115711893delinsGC CT GC . . ANN=GC|mnv|HIGH|S1pr1|13609|transcript|ENSMUST00000055676.3|Coding|2/2|c.1051_1052delAGinsGC|p.(S351A)|1586/4640|1051/1149|351/383||;allele_of_genes="MGI:1096355";alleles="MGI:4822471";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.115711892_115711893delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5654685";strain_name="(129S6/SvEvTac_x_C57BL/6)F1";symbol="S1pr1<sup>tm1.1Thla</sup>";symbol_text="S1pr1<tm1.1Thla>"
3 123546817 NC_000069.6:g.123546817T>C T C . . ANN=C|missense_variant|MODERATE|Ndst3|83398|transcript|ENSMUST00000029602.12|Coding|11/13|c.2351A>G|p.(Q784R)|2422/146224|2351/2622|784/874||,C|missense_variant|MODERATE|Ndst3|83398|transcript|ENSMUST00000124803.7|Coding|10/12|c.1106A>G|p.(Q369R)|1394/90892|1106/1377|369/459||,C|missense_variant|MODERATE|Ndst3|83398|transcript|ENSMUST00000132112.7|Coding|9/11|c.1106A>G|p.(Q369R)|1546/93334|1106/1377|369/459||,C|missense_variant|MODERATE|Ndst3|83398|transcript|ENSMUST00000154668.7|Coding|12/14|c.2351A>G|p.(Q784R)|2656/164686|2351/2622|784/874||,C|missense_variant|MODERATE|Ndst3|83398|transcript|ENSMUST00000172537.2|Coding|12/14|c.2351A>G|p.(Q784R)|2758/161593|2351/2622|784/874||,C|3_prime_UTR_exon_variant|LOW|Ndst3|83398|transcript|ENSMUST00000137404.7|Coding|12/14|c.*378A>G|p.(%3D)|2612/164688|1930/1929|644/643||;allele_of_genes="MGI:1932544";alleles="MGI:5571271";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.123546817T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5566620";strain_name="C57BL/6NCrlAnu";symbol="Ndst3<sup>m1Anu</sup>";symbol_text="Ndst3<m1Anu>"
3 127634419 NC_000069.6:g.127634419T>G T G . . ANN=G|missense_variant|MODERATE|Neurog2|11924|transcript|ENSMUST00000029587.8|Coding|2/2|c.691T>G|p.(S231A)|1015/2497|691/792|231/264||;allele_of_genes="MGI:109619";alleles="MGI:5638453";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.127634419T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Neurog2<sup>tm1.1Meg</sup>";symbol_text="Neurog2<tm1.1Meg>"
3 127634428 NC_000069.6:g.127634428_127634429delinsGC AG GC . . ANN=GC|mnv|HIGH|Neurog2|11924|transcript|ENSMUST00000029587.8|Coding|2/2|c.700_701delAGinsGC|p.(S234A)|1024/2497|700/792|234/264||;allele_of_genes="MGI:109619";alleles="MGI:5638453";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000069.6:g.127634428_127634429delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2160041";strain_name="129";symbol="Neurog2<sup>tm1.1Meg</sup>";symbol_text="Neurog2<tm1.1Meg>"
3 159601553 NC_000069.6:g.159601553C>T C T . . ANN=T|stop_gained|HIGH|Rpe65|19892|transcript|ENSMUST00000029824.8|Coding|3/14|c.130C>T|p.(R44*)|130/25567|130/1602|44/534||,T|stop_gained|HIGH|Rpe65|19892|transcript|ENSMUST00000196999.4|Coding|3/15|c.130C>T|p.(R44*)|188/26147|130/1602|44/534||,T|stop_gained|HIGH|Rpe65|19892|transcript|ENSMUST00000197771.4|Coding|3/7|c.130C>T|p.(R44*)|145/7202|130/351|44/117||;allele_of_genes="MGI:98001";alleles="MGI:2388240";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000069.6:g.159601553C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2161807";strain_name="B6.A-H2-T18<a>/BoyEgJ";symbol="Rpe65<sup>rd12</sup>";symbol_text="Rpe65<rd12>"
4 11379300 NC_000070.6:g.11379300T>C T C . . ANN=C|missense_variant|MODERATE|Esrp1|207920|transcript|ENSMUST00000043781.13|Coding|4/15|c.481A>G|p.(M161V)|724/54747|481/1980|161/660||,C|missense_variant|MODERATE|Esrp1|207920|transcript|ENSMUST00000108310.7|Coding|4/16|c.481A>G|p.(M161V)|724/53675|481/2034|161/678||,C|missense_variant|MODERATE|Esrp1|207920|transcript|ENSMUST00000108311.8|Coding|4/16|c.481A>G|p.(M161V)|828/54746|481/2046|161/682||,C|missense_variant|MODERATE|Esrp1|207920|transcript|ENSMUST00000108313.7|Coding|4/14|c.481A>G|p.(M161V)|828/54851|481/1815|161/605||,C|missense_variant|MODERATE|Esrp1|207920|transcript|ENSMUST00000155519.1|Coding|4/11|c.439A>G|p.(M147V)|439/28809|439/1503|147/501||;allele_of_genes="MGI:1917326";alleles="MGI:4450974";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.11379300T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Esrp1<sup>m1Btlr</sup>";symbol_text="Esrp1<m1Btlr>"
4 12047804 NC_000070.6:g.12047804A>G A G . . ANN=G|splice_region_variant&coding_transcript_intron_variant|LOW|Tmem67|329795|transcript|ENSMUST00000050686.9|Coding|22/27|c.2322+6T>C|p.?|2334/48603|2323/2988|775/996||,G|splice_region_variant&coding_transcript_intron_variant|LOW|Tmem67|329795|transcript|ENSMUST00000108293.2|Coding|23/28|c.2520+6T>C|p.?|3113/50376|2521/3186|841/1062||,G|splice_region_variant&3_prime_UTR_intron_variant|LOW|Tmem67|329795|transcript|ENSMUST00000131145.8|Coding|23/28|c.*1796+6T>C|p.(%3D)|2419/48576|623/622|208/207||;allele_of_genes="MGI:1923928";alleles="MGI:5433409";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000070.6:g.12047804A>G";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmem67<sup>b2b1163.1Clo</sup>";symbol_text="Tmem67<b2b1163.1Clo>"
4 12068879 NC_000070.6:g.12068879A>T A T . . ANN=T|missense_variant|MODERATE|Tmem67|329795|transcript|ENSMUST00000050686.9|Coding|11/28|c.1120T>A|p.(Y374N)|1131/48603|1120/2988|374/996||,T|missense_variant|MODERATE|Tmem67|329795|transcript|ENSMUST00000108293.2|Coding|12/29|c.1318T>A|p.(Y440N)|1910/50376|1318/3186|440/1062||,T|3_prime_UTR_exon_variant|LOW|Tmem67|329795|transcript|ENSMUST00000131145.8|Coding|11/29|c.*486T>A|p.(%3D)|1108/48576|623/622|208/207||,T|non_coding_transcript_exon_variant|LOW|Tmem67|.|transcript|ENSMUST00000147746.7|Noncoding|11/11|n.1101T>A||1101/19465||||,T|non_coding_transcript_exon_variant|LOW|Tmem67|329795|transcript|ENSMUST00000146140.7|Noncoding|11/14|n.1177T>A||1177/27956||||;allele_of_genes="MGI:1923928";alleles="MGI:5437086";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.12068879A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmem67<sup>b2b1291.1Clo</sup>";symbol_text="Tmem67<b2b1291.1Clo>"
4 41095252 NC_000070.6:g.41095252A>G A G . . ANN=G|missense_variant|MODERATE|Aqp3|11828|transcript|ENSMUST00000055327.7|Coding|2/6|c.128T>C|p.(V43A)|202/5462|128/879|43/293||;allele_of_genes="MGI:1333777";alleles="MGI:4366758";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.41095252A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Aqp3<sup>m1Btlr</sup>";symbol_text="Aqp3<m1Btlr>"
4 41597940 NC_000070.6:g.41597940G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnaic1|68922|transcript|ENSMUST00000102963.9|Coding|4/19|c.240+1G>A|p.?|458/68384|241/2106|81/702||;allele_of_genes="MGI:1916172";alleles="MGI:5285080";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000070.6:g.41597940G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnaic1<sup>b2b284Clo</sup>";symbol_text="Dnaic1<b2b284Clo>"
4 41630669 NC_000070.6:g.41630669T>C T C . . ANN=C|missense_variant|MODERATE|Dnaic1|68922|transcript|ENSMUST00000102963.9|Coding|16/20|c.1565T>C|p.(I522T)|1782/68384|1565/2106|522/702||;allele_of_genes="MGI:1916172";alleles="MGI:5317589";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.41630669T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnaic1<sup>b2b1526Clo</sup>";symbol_text="Dnaic1<b2b1526Clo>"
4 43553116 NC_000070.6:g.43553116A>C A C . . ANN=C|missense_variant|MODERATE|Tln1|21894|transcript|ENSMUST00000030187.13|Coding|10/57|c.974T>G|p.(L325R)|1300/30904|974/7626|325/2542||;allele_of_genes="MGI:1099832";alleles="MGI:5299185";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.43553116A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Tln1<sup>tm1.1Bpet</sup>";symbol_text="Tln1<tm1.1Bpet>"
4 47049344 NC_000070.6:g.47049344A>T A T . . ANN=T|missense_variant|MODERATE|Anks6|75691|transcript|ENSMUST00000084616.2|Coding|2/15|c.560T>A|p.(M187K)|586/41618|560/2448|187/816||,T|missense_variant|MODERATE|Anks6|75691|transcript|ENSMUST00000107747.7|Coding|2/17|c.560T>A|p.(M187K)|586/41638|560/2448|187/816||,T|missense_variant|MODERATE|Anks6|75691|transcript|ENSMUST00000229609.1|Coding|2/16|c.560T>A|p.(M187K)|707/41300|560/2652|187/884||;allele_of_genes="MGI:1922941";alleles="MGI:5463579";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.47049344A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Anks6<sup>b2b1801.1Clo</sup>";symbol_text="Anks6<b2b1801.1Clo>"
4 53089914 NC_000070.6:g.53089914A>T A T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Abca1|11303|transcript|ENSMUST00000030010.3|Coding|11/50|c.1196T>A|p.(V399E)|1516/129109|1196/6786|399/2262||;allele_of_genes="MGI:99607";alleles="MGI:5792044";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000070.6:g.53089914A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Abca1<sup>mpc227H</sup>";symbol_text="Abca1<mpc227H>"
4 58373471 NC_000070.6:g.58373471G>A G A . . ANN=A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000081919.11|Coding|14/14|c.2365G>A|p.(V789M)|2517/88343|2365/2607|789/869||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000084578.11|Coding|15/15|c.2365G>A|p.(V789M)|2515/88342|2365/2607|789/869||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000098057.9|Coding|16/16|c.2440G>A|p.(V814M)|2590/88342|2440/2682|814/894||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000098059.9|Coding|14/14|c.2371G>A|p.(V791M)|2521/88341|2371/2613|791/871||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000102893.9|Coding|14/14|c.2341G>A|p.(V781M)|2491/88342|2341/2583|781/861||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000177951.7|Coding|15/15|c.2371G>A|p.(V791M)|2521/88341|2371/2613|791/871||,A|missense_variant|MODERATE|Musk|18198|transcript|ENSMUST00000179951.1|Coding|15/15|c.2395G>A|p.(V799M)|2545/88341|2395/2637|799/879||;allele_of_genes="MGI:103581";alleles="MGI:3815474";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.58373471G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Musk<sup>tm2Vwi</sup>";symbol_text="Musk<tm2Vwi>"
4 65297257 NC_000070.6:g.65297257T>A T A . . ANN=A|missense_variant|MODERATE|Pappa|18491|transcript|ENSMUST00000084501.3|Coding|13/22|c.3400T>A|p.(L1134M)|3768/233336|3400/4875|1134/1625||;allele_of_genes="MGI:97479";alleles="MGI:6305839";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.65297257T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pappa<sup>m4Btlr</sup>";symbol_text="Pappa<m4Btlr>"
4 82989199 NC_000070.6:g.82989199A>T A T . . ANN=T|stop_gained|HIGH|Frem1|329872|transcript|ENSMUST00000071708.11|Coding|13/36|c.2477T>A|p.(L826*)|2736/123176|2477/6576|826/2192||,T|stop_gained|HIGH|Frem1|329872|transcript|ENSMUST00000107230.7|Coding|14/37|c.2420T>A|p.(L807*)|3119/154413|2420/6519|807/2173||,T|stop_gained|HIGH|Frem1|329872|transcript|ENSMUST00000170248.8|Coding|14/37|c.2423T>A|p.(L808*)|2949/154248|2423/6522|808/2174||;allele_of_genes="MGI:2670972";alleles="MGI:3038748";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000070.6:g.82989199A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Frem1<sup>eyes2</sup>";symbol_text="Frem1<eyes2>"
4 83013842 NC_000070.6:g.83013842A>T A T . . ANN=T|missense_variant|MODERATE|Frem1|329872|transcript|ENSMUST00000071708.11|Coding|3/36|c.621T>A|p.(D207E)|880/123176|621/6576|207/2192||,T|missense_variant|MODERATE|Frem1|329872|transcript|ENSMUST00000107230.7|Coding|4/37|c.621T>A|p.(D207E)|1320/154413|621/6519|207/2173||,T|missense_variant|MODERATE|Frem1|329872|transcript|ENSMUST00000170248.8|Coding|4/37|c.621T>A|p.(D207E)|1147/154248|621/6522|207/2174||,T|non_coding_transcript_exon_variant|LOW|Frem1|329872|transcript|ENSMUST00000131102.1|Noncoding|4/11|n.1320T>A||1320/59405||||;allele_of_genes="MGI:2670972";alleles="MGI:5427907";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.83013842A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Frem1<sup>tm2.1Ksek</sup>";symbol_text="Frem1<tm2.1Ksek>"
4 94691741 NC_000070.6:g.94691741T>C T C . . ANN=C|missense_variant|MODERATE|Ift74|67694|transcript|ENSMUST00000030311.10|Coding|19/20|c.1645T>C|p.(W549R)|1821/78739|1645/1803|549/601||;allele_of_genes="MGI:1914944";alleles="MGI:5311374";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.94691741T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ift74<sup>b2b796Clo</sup>";symbol_text="Ift74<b2b796Clo>"
4 101745645 NC_000070.6:g.101745645T>A T A . . ANN=A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|5/19|c.629T>A|p.(M210K)|1184/97949|629/3489|210/1163||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|5/18|c.629T>A|p.(M210K)|1184/74855|629/2679|210/893||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|5/19|c.629T>A|p.(M210K)|1184/96264|629/2685|210/895||;allele_of_genes="MGI:104993";alleles="MGI:5609704";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.101745645T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lepr<sup>m6Btlr</sup>";symbol_text="Lepr<m6Btlr>"
4 101745681 NC_000070.6:g.101745680_101745682delinsCGA AG GA . . ANN=GA|mnv|HIGH|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|5/19|c.665_666delAGinsGA|p.(Q222R)|1220/97949|665/3489|222/1163||,GA|mnv|HIGH|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|5/18|c.665_666delAGinsGA|p.(Q222R)|1220/74855|665/2679|222/893||,GA|mnv|HIGH|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|5/19|c.665_666delAGinsGA|p.(Q222R)|1220/96264|665/2685|222/895||;allele_of_genes="MGI:104993";alleles="MGI:5049781";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.101745680_101745682delinsCGA";impact="MODERATE";soTerm="MNV";strain_id="MGI:2661783";strain_name="129P3/J";symbol="Lepr<sup>tm1.1Rll</sup>";symbol_text="Lepr<tm1.1Rll>"
4 101764871 NC_000070.6:g.101764871T>A T A . . ANN=A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|8/19|c.999T>A|p.(Y333*)|1554/97949|999/3489|333/1163||,A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|8/18|c.999T>A|p.(Y333*)|1554/74855|999/2679|333/893||,A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|8/19|c.999T>A|p.(Y333*)|1554/96264|999/2685|333/895||;allele_of_genes="MGI:104993";alleles="MGI:4839995";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000070.6:g.101764871T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Lepr<sup>m5Btlr</sup>";symbol_text="Lepr<m5Btlr>"
4 101765152 NC_000070.6:g.101765152G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|8/18|c.1279+1G>A|p.?|1835/97949|1280/3489|427/1163||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|8/17|c.1279+1G>A|p.?|1835/74855|1280/2679|427/893||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|8/18|c.1279+1G>A|p.?|1835/96264|1280/2685|427/895||;allele_of_genes="MGI:104993";alleles="MGI:5806340";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000070.6:g.101765152G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lepr<sup>m7Btlr</sup>";symbol_text="Lepr<m7Btlr>"
4 101772887 NC_000070.6:g.101772887G>A G A . . ANN=A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|12/19|c.1798G>A|p.(D600N)|2353/97949|1798/3489|600/1163||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|12/18|c.1798G>A|p.(D600N)|2353/74855|1798/2679|600/893||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|12/19|c.1798G>A|p.(D600N)|2353/96264|1798/2685|600/895||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000128948.7|Noncoding|3/5|n.401G>A||401/11547||||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000156402.1|Noncoding|2/5|n.130G>A||130/11528||||;allele_of_genes="MGI:104993";alleles="MGI:2182842";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.101772887G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2160128";strain_name="KK";symbol="Lepr<sup>KK</sup>";symbol_text="Lepr<KK>"
4 101772958 NC_000070.6:g.101772958G>A G A . . ANN=A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|12/19|c.1869G>A|p.(W623*)|2424/97949|1869/3489|623/1163||,A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|12/18|c.1869G>A|p.(W623*)|2424/74855|1869/2679|623/893||,A|stop_gained|HIGH|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|12/19|c.1869G>A|p.(W623*)|2424/96264|1869/2685|623/895||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000128948.7|Noncoding|3/5|n.472G>A||472/11547||||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000156402.1|Noncoding|2/5|n.201G>A||201/11528||||;allele_of_genes="MGI:104993";alleles="MGI:3817472";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000070.6:g.101772958G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lepr<sup>m3Btlr</sup>";symbol_text="Lepr<m3Btlr>"
4 101774255 NC_000070.6:g.101774256_101774257del AGG A . . ANN=A|frameshift_truncation|HIGH|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|13/19|c.1962_1963del|p.(R656Kfs*13)|2517/96264|1962/2685|654/895||,A|frameshift_variant|HIGH|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|13/19|c.1962_1963del|p.(R656Kfs*13)|2517/97949|1962/3489|654/1163||,A|frameshift_variant|HIGH|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|13/18|c.1962_1963del|p.(R656Kfs*13)|2517/74855|1962/2679|654/893||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000128948.7|Noncoding|4/5|n.565_566del||565/11547||||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000156402.1|Noncoding|3/5|n.294_295del||294/11528||||;allele_of_genes="MGI:104993";alleles="MGI:2182820";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000070.6:g.101774256_101774257del";impact="HIGH";soTerm="deletion";strain_id="MGI:5649524";strain_name="CD-1";symbol="Lepr<sup>db-NCSU</sup>";symbol_text="Lepr<db-NCSU>"
4 101780063 NC_000070.6:g.101780063T>A T A . . ANN=A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|14/19|c.2148T>A|p.(N716K)|2703/97949|2148/3489|716/1163||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000102777.9|Coding|14/18|c.2148T>A|p.(N716K)|2703/74855|2148/2679|716/893||,A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000106921.8|Coding|14/19|c.2148T>A|p.(N716K)|2703/96264|2148/2685|716/895||,A|non_coding_transcript_exon_variant|LOW|Lepr|16847|transcript|ENSMUST00000156402.1|Noncoding|4/5|n.480T>A||480/11528||||;allele_of_genes="MGI:104993";alleles="MGI:5563456";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.101780063T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Lepr<sup>m1Anu</sup>";symbol_text="Lepr<m1Anu>"
4 101815193 NC_000070.6:g.101815193A>C A C . . ANN=C|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|19/19|c.3413A>C|p.(Y1138S)|3968/97949|3413/3489|1138/1163||;allele_of_genes="MGI:104993";alleles="MGI:2653294";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.101815193A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Lepr<sup>tm1Mgmj</sup>";symbol_text="Lepr<tm1Mgmj>"
4 101815201 NC_000070.6:g.101815201C>A C A . . ANN=A|missense_variant|MODERATE|Lepr|16847|transcript|ENSMUST00000037552.9|Coding|19/19|c.3421C>A|p.(Q1141K)|3976/97949|3421/3489|1141/1163||;allele_of_genes="MGI:104993,MGI:104993";alleles="MGI:6304291,MGI:6304291";geneLevelConsequence="missense_variant,missense_variant";hgvs_nomenclature="NC_000070.6:g.101815201C>A";impact="MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lepr<sup>m10Btlr</sup>";symbol_text="Lepr<m10Btlr>"
4 116005646 NC_000070.6:g.116005646G>T G T . . ANN=T|missense_variant|MODERATE|Faah|14073|transcript|ENSMUST00000049095.5|Coding|3/15|c.385C>A|p.(P129T)|654/21258|385/1740|129/580||,T|non_coding_transcript_exon_variant|LOW|Faah|14073|transcript|ENSMUST00000125761.7|Noncoding|3/15|n.403C>A||403/50531||||,T|non_coding_transcript_exon_variant|LOW|Faah|14073|transcript|ENSMUST00000143724.7|Noncoding|3/9|n.403C>A||403/15951||||,T|non_coding_transcript_exon_variant|LOW|Faah|14073|transcript|ENSMUST00000150668.7|Noncoding|3/14|n.455C>A||455/19535||||,T|non_coding_transcript_exon_variant|LOW|Faah|14073|transcript|ENSMUST00000154249.7|Noncoding|3/12|n.444C>A||444/21048||||;allele_of_genes="MGI:109609";alleles="MGI:5644434";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.116005646G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Faah<sup>tm1.1Flee</sup>";symbol_text="Faah<tm1.1Flee>"
4 133665295 NC_000070.6:g.133665295C>T C T . . ANN=T|missense_variant|MODERATE|Pigv|230801|transcript|ENSMUST00000062118.10|Coding|3/4|c.563G>A|p.(R188H)|937/12261|563/1482|188/494||,T|coding_transcript_intron_variant|LOW|Pigv|230801|transcript|ENSMUST00000067902.12|Coding|2/2|c.79-2504G>A|p.(%3D)|453/10394|79/360|27/120||;allele_of_genes="MGI:2442480";alleles="MGI:5645357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.133665295C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pigv<sup>b2b2859Clo</sup>";symbol_text="Pigv<b2b2859Clo>"
4 136660693 NC_000070.6:g.136660693T>C T C . . ANN=C|missense_variant|MODERATE|Ephb2|13844|transcript|ENSMUST00000059287.13|Coding|11/16|c.2098A>G|p.(T700A)|2224/182349|2098/2964|700/988||,C|missense_variant|MODERATE|Ephb2|13844|transcript|ENSMUST00000105845.8|Coding|11/16|c.2095A>G|p.(T699A)|2253/188450|2095/2961|699/987||,C|missense_variant|MODERATE|Ephb2|13844|transcript|ENSMUST00000105846.8|Coding|11/16|c.2098A>G|p.(T700A)|2111/181198|2098/2964|700/988||,C|non_coding_transcript_exon_variant|LOW|Ephb2|13844|transcript|ENSMUST00000151502.1|Noncoding|2/3|n.466A>G||466/1966||||;allele_of_genes="MGI:99611";alleles="MGI:5505687";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.136660693T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Ephb2<sup>tm1.1Meg</sup>";symbol_text="Ephb2<tm1.1Meg>"
4 141214473 NC_000070.6:g.141214473G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Rsg1|76166|transcript|ENSMUST00000097813.2|Coding|2/5|c.112+1G>A|p.?|259/6193|113/777|38/259||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Rsg1|76166|transcript|ENSMUST00000125175.1|Noncoding|1/2|n.28+1G>A||29/4230||||;allele_of_genes="MGI:1923416";alleles="MGI:5560911";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000070.6:g.141214473G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cplane2<sup>b2b2827Clo</sup>";symbol_text="Cplane2<b2b2827Clo>"
4 141218575 NC_000070.6:g.141218575T>C T C . . ANN=C|missense_variant|MODERATE|Rsg1|76166|transcript|ENSMUST00000097813.2|Coding|5/6|c.428T>C|p.(F143S)|574/6193|428/777|143/259||,C|non_coding_transcript_exon_variant|LOW|Rsg1|76166|transcript|ENSMUST00000125175.1|Noncoding|3/3|n.219T>C||219/4230||||;allele_of_genes="MGI:1923416";alleles="MGI:5616147";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.141218575T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cplane2<sup>b2b2804Clo</sup>";symbol_text="Cplane2<b2b2804Clo>"
4 148643384 NC_000070.6:g.148643384G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Gm572|230909|transcript|ENSMUST00000105698.2|Coding|1/10|c.26+1G>A|p.?|68/28256|27/1200|9/400||;allele_of_genes="MGI:2685418";alleles="MGI:5431499";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000070.6:g.148643384G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gm572<sup>b2b1167Clo</sup>";symbol_text="Gm572<b2b1167Clo>"
4 149652699 NC_000070.6:g.149652699A>G A G . . ANN=G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000038859.13|Coding|21/24|c.2633T>C|p.(L878P)|2928/49531|2633/3138|878/1046||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105688.9|Coding|22/25|c.2630T>C|p.(L877P)|3007/48789|2630/3135|877/1045||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105689.7|Coding|19/22|c.2627T>C|p.(L876P)|2627/12645|2627/3132|876/1044||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105690.8|Coding|21/24|c.2639T>C|p.(L880P)|2944/49541|2639/3144|880/1048||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000118704.7|Coding|21/24|c.2636T>C|p.(L879P)|2920/26874|2636/3141|879/1047||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000122059.7|Coding|21/24|c.2618T>C|p.(L873P)|2857/52421|2618/3123|873/1041||,G|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000177654.7|Coding|20/23|c.2639T>C|p.(L880P)|2790/25025|2639/3144|880/1048||;allele_of_genes="MGI:1098211";alleles="MGI:5806440";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.149652699A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pik3cd<sup>m2Btlr</sup>";symbol_text="Pik3cd<m2Btlr>"
4 149657319 NC_000070.6:g.149657319A>C A C . . ANN=C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000038859.13|Coding|9/24|c.1169T>G|p.(L390R)|1464/49531|1169/3138|390/1046||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105688.9|Coding|10/25|c.1169T>G|p.(L390R)|1546/48789|1169/3135|390/1045||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105689.7|Coding|7/22|c.1169T>G|p.(L390R)|1169/12645|1169/3132|390/1044||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000105690.8|Coding|9/24|c.1169T>G|p.(L390R)|1474/49541|1169/3144|390/1048||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000118704.7|Coding|9/24|c.1169T>G|p.(L390R)|1453/26874|1169/3141|390/1047||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000122059.7|Coding|9/24|c.1157T>G|p.(L386R)|1396/52421|1157/3123|386/1041||,C|missense_variant|MODERATE|Pik3cd|18707|transcript|ENSMUST00000177654.7|Coding|8/23|c.1169T>G|p.(L390R)|1320/25025|1169/3144|390/1048||;allele_of_genes="MGI:1098211";alleles="MGI:5582742";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.149657319A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pik3cd<sup>m1Btlr</sup>";symbol_text="Pik3cd<m1Btlr>"
4 152407139 NC_000070.6:g.152407139T>A T A . . ANN=A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000030768.8|Coding|5/15|c.227A>T|p.(Y76F)|408/86781|227/1062|76/354||,A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000105648.8|Coding|6/16|c.269A>T|p.(Y90F)|488/56059|269/1104|90/368||,A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000159186.7|Coding|6/17|c.269A>T|p.(Y90F)|358/84713|269/1149|90/383||,A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000159840.7|Coding|5/15|c.227A>T|p.(Y76F)|446/58099|227/1062|76/354||,A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000160884.7|Coding|6/16|c.269A>T|p.(Y90F)|796/87128|269/1104|90/368||,A|missense_variant|MODERATE|Kcnab2|16498|transcript|ENSMUST00000161236.7|Coding|6/9|c.269A>T|p.(Y90F)|535/53106|269/402|90/134||,A|non_coding_transcript_exon_variant|LOW|Kcnab2|16498|transcript|ENSMUST00000159435.7|Noncoding|3/5|n.265A>T||265/45704||||,A|non_coding_transcript_exon_variant|LOW|Kcnab2|16498|transcript|ENSMUST00000159844.7|Noncoding|4/11|n.185A>T||185/27757||||,A|non_coding_transcript_exon_variant|LOW|Kcnab2|16498|transcript|ENSMUST00000161496.7|Noncoding|4/8|n.184A>T||184/29631||||;allele_of_genes="MGI:109239";alleles="MGI:2179739";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.152407139T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3687635";strain_name="129S7/SvEvBrd-Hprt<+>";symbol="Kcnab2<sup>tm2Mes</sup>";symbol_text="Kcnab2<tm2Mes>"
4 155070751 NC_000070.6:g.155070751G>A G A . . ANN=A|missense_variant|MODERATE|Pex10|668173|transcript|ENSMUST00000103180.3|Coding|5/6|c.881G>A|p.(C294Y)|934/5418|881/975|294/325||,A|non_coding_transcript_exon_variant|LOW|Pex10|668173|transcript|ENSMUST00000125432.7|Noncoding|3/4|n.2288G>A||2288/5125||||;allele_of_genes="MGI:2684988";alleles="MGI:5638060";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000070.6:g.155070751G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pex10<sup>m1Nisw</sup>";symbol_text="Pex10<m1Nisw>"
4 156048603 NC_000070.6:g.156048604_156048612del CCGGCCTGTG C . . ANN=C|disruptive_inframe_deletion|MODERATE|Ttll10|.|transcript|ENSMUST00000184348.7|Coding|3/14|c.14_22del|p.(P5_G8delinsR)|455/24502|14/2115|5/705||,C|disruptive_inframe_deletion|MODERATE|Ttll10|330010|transcript|ENSMUST00000051509.14|Coding|3/15|c.14_22del|p.(P5_G8delinsR)|217/15978|14/2028|5/676||,C|5_prime_UTR_intron_variant|LOW|Ttll10|330010|transcript|ENSMUST00000184684.7|Coding|2/12|c.-20-969_-20-961del|p.(%3D)|165/15166|1/1374|1/458||,C|non_coding_transcript_exon_variant|LOW|Ttll10|.|transcript|ENSMUST00000097731.7|Noncoding|3/8|n.508_516del||508/17041||||;allele_of_genes="MGI:1921855";alleles="MGI:5607785";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000070.6:g.156048604_156048612del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3056279";strain_name="C57BL/6NJ";symbol="Ttll10<sup>em1(IMPC)J</sup>";symbol_text="Ttll10<em1(IMPC)J>"
5 13455597 NC_000071.6:g.13455597A>T A T . . ANN=T|missense_variant|MODERATE|Sema3a|20346|transcript|ENSMUST00000030714.7|Coding|3/17|c.324A>T|p.(K108N)|973/203257|324/2319|108/773||,T|missense_variant|MODERATE|Sema3a|20346|transcript|ENSMUST00000095012.9|Coding|4/18|c.324A>T|p.(K108N)|705/204205|324/2319|108/773||,T|missense_variant|MODERATE|Sema3a|20346|transcript|ENSMUST00000137798.7|Coding|4/18|c.324A>T|p.(K108N)|545/200352|324/2064|108/688||,T|non_coding_transcript_exon_variant|LOW|Sema3a|20346|transcript|ENSMUST00000195907.4|Noncoding|6/9|n.747A>T||747/399115||||,T|non_coding_transcript_exon_variant|LOW|Sema3a|20346|transcript|ENSMUST00000200073.1|Noncoding|3/5|n.705A>T||705/96825||||;allele_of_genes="MGI:107558";alleles="MGI:4455203";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.13455597A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Sema3a<sup>m808Ddg</sup>";symbol_text="Sema3a<m808Ddg>"
5 17724183 NC_000071.6:g.17724183T>C T C . . ANN=C|missense_variant|MODERATE|Sema3c|20348|transcript|ENSMUST00000030568.13|Coding|17/18|c.1814T>C|p.(L605P)|2537/155988|1814/2256|605/752||,C|non_coding_transcript_exon_variant|LOW|Sema3c|20348|transcript|ENSMUST00000115271.2|Noncoding|6/7|n.1124T>C||1124/36064||||;allele_of_genes="MGI:107557";alleles="MGI:3522218";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.17724183T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sema3c<sup>L605P</sup>";symbol_text="Sema3c<L605P>"
5 17795684 NC_000071.6:g.17795684A>T A T . . ANN=T|stop_gained|HIGH|Cd36|12491|transcript|ENSMUST00000082367.12|Coding|11/15|c.1020T>A|p.(Y340*)|1283/53681|1020/1419|340/473||,T|stop_gained|HIGH|Cd36|12491|transcript|ENSMUST00000165232.7|Coding|12/16|c.1020T>A|p.(Y340*)|1328/67361|1020/1419|340/473||,T|stop_gained|HIGH|Cd36|12491|transcript|ENSMUST00000169095.5|Coding|12/16|c.1020T>A|p.(Y340*)|1295/106381|1020/1419|340/473||,T|stop_gained|HIGH|Cd36|12491|transcript|ENSMUST00000170051.7|Coding|11/15|c.1020T>A|p.(Y340*)|1340/68103|1020/1419|340/473||,T|stop_gained|HIGH|Cd36|12491|transcript|ENSMUST00000197890.4|Coding|11/15|c.1020T>A|p.(Y340*)|1301/53232|1020/1419|340/473||;allele_of_genes="MGI:107899";alleles="MGI:3573941";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.17795684A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Cd36<sup>obl</sup>";symbol_text="Cd36<obl>"
5 21822092 NC_000071.6:g.21822092C>A C A . . ANN=A|missense_variant|MODERATE|Slc26a5|80979|transcript|ENSMUST00000030878.7|Coding|11/20|c.1136G>T|p.(G379V)|1370/54950|1136/2235|379/745||,A|missense_variant|MODERATE|Slc26a5|80979|transcript|ENSMUST00000115176.7|Coding|9/18|c.1025G>T|p.(G342V)|1176/51344|1025/2124|342/708||,A|missense_variant|MODERATE|Slc26a5|80979|transcript|ENSMUST00000127975.1|Coding|9/17|c.1136G>T|p.(G379V)|1139/36184|1136/2138|379/712||,A|missense_variant|MODERATE|Slc26a5|80979|transcript|ENSMUST00000142888.7|Coding|9/14|c.1136G>T|p.(G379V)|1187/36363|1136/1344|379/448||;allele_of_genes="MGI:1933154";alleles="MGI:5792083";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.21822092C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc26a5<sup>mpc234H</sup>";symbol_text="Slc26a5<mpc234H>"
5 21895987 NC_000071.6:g.21895987A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Reln|19699|transcript|ENSMUST00000062372.13|Coding|63/63|c.10283+2T>C|p.?|10566/459441|10284/10380|3428/3460||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Reln|19699|transcript|ENSMUST00000160791.1|Noncoding|1/2|n.80+2T>C||81/11174||||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Reln|19699|transcript|ENSMUST00000161356.7|Coding|63/64|c.10283+2T>C|p.?|10578/460249|10284/10386|3428/3462||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Reln|19699|transcript|ENSMUST00000200667.1|Noncoding|3/3|n.358+2T>C||359/4142||||,G|non_coding_transcript_exon_variant|LOW|Reln|.|transcript|ENSMUST00000199034.1|Noncoding|1/1|n.2T>C||2/356||||;allele_of_genes="MGI:103022";alleles="MGI:5505412";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000071.6:g.21895987A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159747";strain_name="A/J";symbol="Reln<sup>ctrdel</sup>";symbol_text="Reln<ctrdel>"
5 30364017 NC_000071.6:g.30364017A>G A G . . ANN=G|missense_variant|MODERATE|Drc1|381738|transcript|ENSMUST00000101448.4|Coding|15/17|c.2021A>G|p.(Y674C)|2085/85308|2021/2262|674/754||;allele_of_genes="MGI:2685906";alleles="MGI:5438062";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.30364017A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Drc1<sup>b2b1654Clo</sup>";symbol_text="Drc1<b2b1654Clo>"
5 30364029 NC_000071.6:g.30364029T>A T A . . ANN=A|missense_variant|MODERATE|Drc1|381738|transcript|ENSMUST00000101448.4|Coding|15/17|c.2033T>A|p.(L678Q)|2097/85308|2033/2262|678/754||;allele_of_genes="MGI:2685906";alleles="MGI:5552738";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.30364029T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Drc1<sup>b2b2237Clo</sup>";symbol_text="Drc1<b2b2237Clo>"
5 31195855 NC_000071.6:g.31195855A>G A G . . ANN=G|missense_variant&splice_region_variant|MODERATE|Snx17|266781|transcript|ENSMUST00000031029.14|Coding|5/15|c.431A>G|p.(E144G)|607/5674|431/1413|144/471||,G|missense_variant&splice_region_variant|MODERATE|Snx17|266781|transcript|ENSMUST00000201535.3|Coding|5/9|c.185A>G|p.(E62G)|441/3751|185/509|62/169||,G|splice_region_variant&3_prime_UTR_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000200730.3|Coding|6/16|c.*241A>G|p.(%3D)|614/5601|265/264|89/88||,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000201835.3|Noncoding|1/6|n.14A>G||14/1869||||,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000202032.3|Noncoding|5/15|n.457A>G||457/5290||||,G|splice_region_variant&3_prime_UTR_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000202124.3|Coding|3/12|c.*37A>G|p.(%3D)|306/5566|202/201|68/67||,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000202318.3|Noncoding|2/7|n.217A>G||217/1878||||,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000202743.3|Noncoding|3/4|n.246A>G||246/1592||||,G|non_coding_transcript_exon_variant|LOW|Snx17|266781|transcript|ENSMUST00000202323.3|Noncoding|5/11|n.528A>G||528/5594||||;allele_of_genes="MGI:2387801";alleles="MGI:5489924";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000071.6:g.31195855A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Snx17<sup>b2b1625.1Clo</sup>";symbol_text="Snx17<b2b1625.1Clo>"
5 35389309 NC_000071.6:g.35389309C>T C T . . ANN=T|stop_gained|HIGH|Hmx1|15371|transcript|ENSMUST00000087674.5|Coding|1/2|c.193C>T|p.(Q65*)|193/3774|193/999|65/333||,T|stop_gained|HIGH|Hmx1|15371|transcript|ENSMUST00000172923.1|Coding|1/2|c.193C>T|p.(Q65*)|202/10623|193/426|65/142||;allele_of_genes="MGI:107178";alleles="MGI:3807705";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.35389309C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hmx1<sup>dmbo</sup>";symbol_text="Hmx1<dmbo>"
5 35392036 NC_000071.6:g.35392037_35392045del CGCCGCCTCG C . . ANN=C|inframe_deletion|MODERATE|Hmx1|15371|transcript|ENSMUST00000087674.5|Coding|2/2|c.673_681del|p.(A225_S227del)|673/3774|673/999|225/333||,C|coding_transcript_intron_variant|LOW|Hmx1|15371|transcript|ENSMUST00000172923.1|Coding|1/1|c.373+2548_373+2556del|p.(%3D)|383/10623|374/426|125/142||;allele_of_genes="MGI:107178";alleles="MGI:3807082";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000071.6:g.35392037_35392045del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2159741";strain_name="C3H/HeJ";symbol="Hmx1<sup>mpe</sup>";symbol_text="Hmx1<mpe>"
5 36519309 NC_000071.6:g.36519309T>C T C . . ANN=C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000031094.14|Coding|7/14|c.1237A>G|p.(S413G)|1297/91794|1237/2085|413/695||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000124036.7|Coding|8/15|c.1297A>G|p.(S433G)|1607/93527|1297/2145|433/715||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000126077.7|Coding|6/13|c.394A>G|p.(S132G)|796/40995|394/1242|132/414||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000130417.7|Coding|8/15|c.1297A>G|p.(S433G)|1509/93517|1297/2145|433/715||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000136189.7|Coding|7/12|c.1237A>G|p.(S413G)|1371/91200|1237/1857|413/619||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000140607.7|Coding|7/14|c.1237A>G|p.(S413G)|1360/91185|1237/2085|413/695||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000146430.7|Coding|7/14|c.1237A>G|p.(S413G)|1289/83722|1237/2085|413/695||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000150813.1|Coding|5/13|c.394A>G|p.(S132G)|517/37535|394/918|132/306||,C|missense_variant|MODERATE|Tbc1d14|100855|transcript|ENSMUST00000171385.7|Coding|5/12|c.394A>G|p.(S132G)|592/40019|394/1242|132/414||,C|coding_transcript_intron_variant|LOW|Tbc1d14|100855|transcript|ENSMUST00000173532.1|Coding|1/2|c.251-24033A>G|p.(%3D)|251/78600|251/575|84/191||,C|3_prime_UTR_exon_variant|LOW|Tbc1d14|100855|transcript|ENSMUST00000141017.1|Coding|5/5|c.*307A>G|p.(%3D)|527/11222|127/126|43/42||,C|non_coding_transcript_exon_variant|LOW|Tbc1d14|100855|transcript|ENSMUST00000149157.2|Noncoding|2/7|n.115A>G||115/25323||||;allele_of_genes="MGI:1098708";alleles="MGI:5300733";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.36519309T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbc1d14<sup>L5Jcs5</sup>";symbol_text="Tbc1d14<L5Jcs5>"
5 43714521 NC_000071.6:g.43714521C>T C T . . ANN=T|stop_gained|HIGH|Cc2d2a|231214|transcript|ENSMUST00000048150.14|Coding|23/40|c.2845C>T|p.(R949*)|3309/78627|2845/4902|949/1634||,T|stop_gained|HIGH|Cc2d2a|231214|transcript|ENSMUST00000125866.3|Coding|20/34|c.2698C>T|p.(R900*)|2838/67029|2698/4372|900/1457||,T|non_coding_transcript_exon_variant|LOW|Cc2d2a|231214|transcript|ENSMUST00000127355.1|Noncoding|10/11|n.1430C>T||1430/20436||||;allele_of_genes="MGI:1924487";alleles="MGI:5311382";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.43714521C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cc2d2a<sup>b2b1035Clo</sup>";symbol_text="Cc2d2a<b2b1035Clo>"
5 64827241 NC_000071.6:g.64827241A>G A G . . ANN=G|missense_variant|MODERATE|Klf3|16599|transcript|ENSMUST00000165536.7|Coding|5/6|c.824A>G|p.(H275R)|1267/29514|824/1035|275/345||,G|missense_variant|MODERATE|Klf3|16599|transcript|ENSMUST00000166409.5|Coding|5/6|c.824A>G|p.(H275R)|1027/17144|824/1035|275/345||,G|missense_variant|MODERATE|Klf3|16599|transcript|ENSMUST00000198946.1|Coding|2/3|c.206A>G|p.(H69R)|206/2742|206/417|69/139||;allele_of_genes="MGI:1342773";alleles="MGI:5567987";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.64827241A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Klf3<sup>m1Cmhd</sup>";symbol_text="Klf3<m1Cmhd>"
5 64954194 NC_000071.6:g.64954194T>A T A . . ANN=A|stop_gained|HIGH|Tlr6|21899|transcript|ENSMUST00000062315.5|Coding|2/2|c.1369A>T|p.(R457*)|1514/8017|1369/2421|457/807||;allele_of_genes="MGI:1341296";alleles="MGI:3831304";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.64954194T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr6<sup>m2Btlr</sup>";symbol_text="Tlr6<m2Btlr>"
5 64954241 NC_000071.6:g.64954241A>G A G . . ANN=G|missense_variant|MODERATE|Tlr6|21899|transcript|ENSMUST00000062315.5|Coding|2/2|c.1322T>C|p.(I441T)|1467/8017|1322/2421|441/807||;allele_of_genes="MGI:1341296";alleles="MGI:3831306";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.64954241A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr6<sup>m4Btlr</sup>";symbol_text="Tlr6<m4Btlr>"
5 64954394 NC_000071.6:g.64954394A>T A T . . ANN=T|stop_gained|HIGH|Tlr6|21899|transcript|ENSMUST00000062315.5|Coding|2/2|c.1169T>A|p.(L390*)|1314/8017|1169/2421|390/807||;allele_of_genes="MGI:1341296";alleles="MGI:3831305";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.64954394A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr6<sup>m3Btlr</sup>";symbol_text="Tlr6<m3Btlr>"
5 66679781 NC_000071.6:g.66679781C>A C A . . ANN=A|missense_variant|MODERATE|Uchl1|22223|transcript|ENSMUST00000031131.10|Coding|4/9|c.293C>A|p.(A98E)|492/11144|293/672|98/224||,A|non_coding_transcript_exon_variant|LOW|Uchl1|22223|transcript|ENSMUST00000176015.4|Noncoding|2/7|n.300C>A||300/10338||||;allele_of_genes="MGI:103149";alleles="MGI:4458326";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.66679781C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159888";strain_name="(WC/ReJ_Kitl<Sl>_x_B6.D2-Kitl<Sl-d>/J)F1-Kitl<Sl>/Kitl<Sl-d>/J";symbol="Uchl1<sup>gad-2J</sup>";symbol_text="Uchl1<gad-2J>"
5 68110461 NC_000071.6:g.68110461C>A C A . . ANN=A|missense_variant|MODERATE|Grxcr1|433899|transcript|ENSMUST00000094715.7|Coding|2/4|c.552C>A|p.(N184K)|605/134564|552/891|184/297||;allele_of_genes="MGI:3577767";alleles="MGI:5792093";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.68110461C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Grxcr1<sup>mpc265H</sup>";symbol_text="Grxcr1<mpc265H>"
5 75652808 NC_000071.6:g.75652808T>A T A . . ANN=A|missense_variant|MODERATE|Kit|16590|transcript|ENSMUST00000005815.6|Coding|19/21|c.2654T>A|p.(I885N)|2751/81768|2654/2940|885/980||,A|missense_variant|MODERATE|Kit|16590|transcript|ENSMUST00000144270.7|Coding|19/21|c.2642T>A|p.(I881N)|2778/81807|2642/2928|881/976||,A|non_coding_transcript_exon_variant|LOW|Kit|16590|transcript|ENSMUST00000148993.4|Noncoding|6/6|n.794T>A||794/7160||||,A|non_coding_transcript_exon_variant|LOW|Kit|16590|transcript|ENSMUST00000202167.1|Noncoding|3/5|n.740T>A||740/7601||||;allele_of_genes="MGI:96677";alleles="MGI:6304941";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.75652808T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kit<sup>W-3Btlr</sup>";symbol_text="Kit<W-3Btlr>"
5 88772723 NC_000071.6:g.88772723T>C T C . . ANN=C|missense_variant|MODERATE|Dck|13178|transcript|ENSMUST00000031311.9|Coding|3/7|c.301T>C|p.(C101R)|561/18286|301/783|101/261||;allele_of_genes="MGI:102726";alleles="MGI:5806456";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.88772723T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dck<sup>m1Btlr</sup>";symbol_text="Dck<m1Btlr>"
5 88778435 NC_000071.6:g.88778435G>T G T . . ANN=T|stop_gained|HIGH|Dck|13178|transcript|ENSMUST00000031311.9|Coding|6/7|c.739G>T|p.(E247*)|999/18286|739/783|247/261||;allele_of_genes="MGI:102726";alleles="MGI:5426400";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.88778435G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dck<sup>memi</sup>";symbol_text="Dck<memi>"
5 95958671 NC_000071.6:g.95958671G>T G T . . ANN=T|missense_variant|MODERATE|Cxcl13|55985|transcript|ENSMUST00000023840.6|Coding|2/4|c.101G>T|p.(C34F)|121/4118|101/330|34/110||;allele_of_genes="MGI:1888499";alleles="MGI:5640775";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.95958671G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cxcl13<sup>m1Btlr</sup>";symbol_text="Cxcl13<m1Btlr>"
5 96569556 NC_000071.6:g.96569556C>T C T . . ANN=T|stop_gained|HIGH|Fras1|231470|transcript|ENSMUST00000036019.4|Coding|12/74|c.1228C>T|p.(Q410*)|2086/410774|1228/12033|410/4011||;allele_of_genes="MGI:2385368";alleles="MGI:5648214";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.96569556C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Fras1<sup>b2b3323Clo</sup>";symbol_text="Fras1<b2b3323Clo>"
5 103784356 NC_000071.6:g.103784356T>C T C . . ANN=C|missense_variant|MODERATE|Aff1|17355|transcript|ENSMUST00000031256.5|Coding|3/20|c.863T>C|p.(V288A)|995/100750|863/3681|288/1227||,C|missense_variant|MODERATE|Aff1|17355|transcript|ENSMUST00000054979.9|Coding|3/20|c.839T>C|p.(V280A)|1006/101161|839/3657|280/1219||,C|missense_variant|MODERATE|Aff1|17355|transcript|ENSMUST00000153165.7|Coding|3/13|c.863T>C|p.(V288A)|1004/87690|863/2612|288/870||,C|non_coding_transcript_exon_variant|LOW|Aff1|17355|transcript|ENSMUST00000126335.1|Noncoding|4/7|n.1108T>C||1108/124055||||;allele_of_genes="MGI:1100819";alleles="MGI:1862020";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.103784356T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2683685";strain_name="BALB/cAnNCrl";symbol="Aff1<sup>Rob</sup>";symbol_text="Aff1<Rob>"
5 104486806 NC_000071.6:g.104486806T>A T A . . ANN=A|missense_variant|MODERATE|Pkd2|18764|transcript|ENSMUST00000086831.3|Coding|7/15|c.1702T>A|p.(W568R)|1889/46370|1702/2901|568/967||,A|non_coding_transcript_exon_variant|LOW|Pkd2|18764|transcript|ENSMUST00000130931.1|Noncoding|7/9|n.1769T>A||1769/30751||||;allele_of_genes="MGI:1099818";alleles="MGI:5690203";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.104486806T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pkd2<sup>m1Btlr</sup>";symbol_text="Pkd2<m1Btlr>"
5 107723835 NC_000071.6:g.107723835G>C G C . . ANN=C|missense_variant|MODERATE|Gfi1|14581|transcript|ENSMUST00000031205.15|Coding|1/6|c.4C>G|p.(P2A)|509/7687|4/1272|2/424||,C|missense_variant|MODERATE|Gfi1|14581|transcript|ENSMUST00000065478.11|Coding|2/7|c.202C>G|p.(P68A)|297/9140|202/1470|68/490||,C|missense_variant|MODERATE|Gfi1|14581|transcript|ENSMUST00000159164.8|Coding|2/7|c.4C>G|p.(P2A)|297/9149|4/1272|2/424||,C|missense_variant|MODERATE|Gfi1|14581|transcript|ENSMUST00000159263.2|Coding|2/4|c.4C>G|p.(P2A)|134/4431|4/559|2/186||;allele_of_genes="MGI:103170";alleles="MGI:3695404";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.107723835G>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Gfi1<sup>tm4Tmo</sup>";symbol_text="Gfi1<tm4Tmo>"
5 127608770 NC_000071.6:g.127608770A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Slc15a4|100561|transcript|ENSMUST00000031367.14|Coding|2/7|c.845+2T>A|p.?|893/21753|846/1725|282/575||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Slc15a4|100561|transcript|ENSMUST00000124569.7|Coding|2/6|c.702+2T>A|p.?|703/21560|703/739|235/246||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Slc15a4|100561|transcript|ENSMUST00000144603.5|Coding|2/5|c.337+2T>A|p.?|338/30951|338/383|113/127||,T|splice_donor_variant&5_prime_UTR_intron_variant|HIGH|Slc15a4|100561|transcript|ENSMUST00000152727.1|Coding|2/4|c.-1+2T>A|p.(%3D)|436/5545|1/244|1/81||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Slc15a4|100561|transcript|ENSMUST00000153832.7|Coding|2/7|c.845+2T>A|p.?|895/21752|846/891|282/297||,T|non_coding_transcript_intron_variant|LOW|Slc15a4|100561|transcript|ENSMUST00000198727.1|Noncoding|2/2|n.157+204T>A||158/12278||||;allele_of_genes="MGI:2140796";alleles="MGI:4835997";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000071.6:g.127608770A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc15a4<sup>m1Btlr</sup>";symbol_text="Slc15a4<m1Btlr>"
5 128996449 NC_000071.6:g.128996449G>A G A . . ANN=A|stop_gained|HIGH|Stx2|13852|transcript|ENSMUST00000031378.13|Coding|3/11|c.121C>T|p.(R41*)|272/24018|121/870|41/290||,A|stop_gained|HIGH|Stx2|13852|transcript|ENSMUST00000100680.9|Coding|3/10|c.121C>T|p.(R41*)|233/23973|121/867|41/289||,A|stop_gained|HIGH|Stx2|13852|transcript|ENSMUST00000149877.1|Coding|2/4|c.34C>T|p.(R12*)|139/6127|34/256|12/85||,A|synonymous_variant|LOW|Stx2|13852|transcript|ENSMUST00000195906.1|Coding|3/5|c.117C>T|p.(%3D)|138/14950|117/129|39/43||,A|non_coding_transcript_exon_variant|LOW|Stx2|13852|transcript|ENSMUST00000141492.7|Noncoding|3/10|n.121C>T||121/19516||||,A|non_coding_transcript_exon_variant|LOW|Stx2|13852|transcript|ENSMUST00000151712.5|Noncoding|3/8|n.247C>T||247/17909||||;allele_of_genes="MGI:108059";alleles="MGI:3692880";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000071.6:g.128996449G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Stx2<sup>repro34</sup>";symbol_text="Stx2<repro34>"
5 135042202 NC_000071.6:g.135042202A>G A G . . ANN=G|missense_variant|MODERATE|Stx1a|20907|transcript|ENSMUST00000005509.10|Coding|6/10|c.451A>G|p.(R151G)|550/27619|451/867|151/289||,G|missense_variant|MODERATE|Stx1a|20907|transcript|ENSMUST00000150838.1|Coding|6/10|c.451A>G|p.(R151G)|472/27541|451/771|151/257||,G|missense_variant|MODERATE|Stx1a|20907|transcript|ENSMUST00000201008.3|Coding|5/7|c.376A>G|p.(R126G)|450/22101|376/476|126/158||,G|non_coding_transcript_exon_variant|LOW|Stx1a|20907|transcript|ENSMUST00000133812.7|Noncoding|4/7|n.308A>G||308/11320||||,G|non_coding_transcript_exon_variant|LOW|Stx1a|20907|transcript|ENSMUST00000144198.1|Noncoding|3/6|n.214A>G||214/7674||||,G|non_coding_transcript_exon_variant|LOW|Stx1a|20907|transcript|ENSMUST00000156626.7|Noncoding|3/7|n.420A>G||420/10040||||;allele_of_genes="MGI:109355";alleles="MGI:5563140";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.135042202A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159965";strain_name="C57BL/6N";symbol="Stx1a<sup>tm1Migar</sup>";symbol_text="Stx1a<tm1Migar>"
5 137363250 NC_000071.6:g.137363250T>C T C . . ANN=C|missense_variant|MODERATE|Ephb4|13846|transcript|ENSMUST00000061244.14|Coding|8/17|c.1514T>C|p.(V505A)|2003/24420|1514/2964|505/988||,C|missense_variant|MODERATE|Ephb4|13846|transcript|ENSMUST00000111054.1|Coding|8/16|c.1514T>C|p.(V505A)|1599/24020|1514/2808|505/936||,C|missense_variant|MODERATE|Ephb4|13846|transcript|ENSMUST00000111055.8|Coding|8/17|c.1541T>C|p.(V514A)|1967/24349|1541/2991|514/997||,C|missense_variant|MODERATE|Ephb4|13846|transcript|ENSMUST00000144296.7|Coding|8/18|c.1514T>C|p.(V505A)|1971/28529|1514/2964|505/988||,C|missense_variant|MODERATE|Ephb4|13846|transcript|ENSMUST00000166239.7|Coding|9/18|c.1514T>C|p.(V505A)|1622/23881|1514/2964|505/988||;allele_of_genes="MGI:104757";alleles="MGI:5614904";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.137363250T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ephb4<sup>b2b2412Clo</sup>";symbol_text="Ephb4<b2b2412Clo>"
5 137583152 NC_000071.6:g.137583152T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tfr2|50765|transcript|ENSMUST00000031729.12|Coding|16/19|c.1667+2T>C|p.?|1820/17631|1668/2397|556/799||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tfr2|50765|transcript|ENSMUST00000196471.4|Coding|15/18|c.1667+2T>C|p.?|1749/16746|1668/2397|556/799||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tfr2|50765|transcript|ENSMUST00000198783.4|Coding|14/17|c.1667+2T>C|p.?|1872/16672|1668/2397|556/799||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tfr2|50765|transcript|ENSMUST00000198866.4|Coding|15/18|c.1667+2T>C|p.?|1968/17640|1668/2397|556/799||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tfr2|50765|transcript|ENSMUST00000199054.4|Coding|16/19|c.1667+2T>C|p.?|1862/17611|1668/2397|556/799||;allele_of_genes="MGI:1354956";alleles="MGI:3847279";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000071.6:g.137583152T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tfr2<sup>m1Btlr</sup>";symbol_text="Tfr2<m1Btlr>"
5 140612535 NC_000071.6:g.140612535T>C T C . . ANN=C|missense_variant|MODERATE|Lfng|16848|transcript|ENSMUST00000031555.2|Coding|4/8|c.611T>C|p.(V204A)|707/8226|611/1137|204/379||,C|non_coding_transcript_exon_variant|LOW|Lfng|16848|transcript|ENSMUST00000199848.1|Noncoding|3/7|n.347T>C||347/2990||||,C|non_coding_transcript_exon_variant|LOW|Lfng|16848|transcript|ENSMUST00000200626.4|Noncoding|4/6|n.206T>C||206/1824||||;allele_of_genes="MGI:1095413";alleles="MGI:3777551";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.140612535T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lfng<sup>m1Btlr</sup>";symbol_text="Lfng<m1Btlr>"
5 140876495 NC_000071.6:g.140876495G>A G A . . ANN=A|stop_gained|HIGH|Card11|108723|transcript|ENSMUST00000085786.6|Coding|23/25|c.3046C>T|p.(R1016*)|3353/127593|3046/3465|1016/1155||,A|non_coding_transcript_exon_variant|LOW|Card11|108723|transcript|ENSMUST00000196169.1|Noncoding|4/6|n.547C>T||547/9214||||;allele_of_genes="MGI:1916978,MGI:1916978";alleles="MGI:5497995,MGI:5497995";geneLevelConsequence="intron_variant,non_coding_transcript_variant,stop_gained";hgvs_nomenclature="NC_000071.6:g.140876495G>A";impact="MODIFIER,HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>M2Btlr</sup>";symbol_text="Card11<M2Btlr>"
5 140883782 NC_000071.6:g.140883782G>A G A . . ANN=A|coding_transcript_intron_variant|LOW|Card11|108723|transcript|ENSMUST00000085786.6|Coding|17/24|c.2270-12C>T|p.(%3D)|2577/127593|2270/3465|757/1155||;allele_of_genes="MGI:1916978";alleles="MGI:6305368";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000071.6:g.140883782G>A";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>m8Btlr</sup>";symbol_text="Card11<m8Btlr>"
5 140885877 NC_000071.6:g.140885877T>C T C . . ANN=C|missense_variant|MODERATE|Card11|108723|transcript|ENSMUST00000085786.6|Coding|16/25|c.2068A>G|p.(S690G)|2375/127593|2068/3465|690/1155||;allele_of_genes="MGI:1916978";alleles="MGI:6113504";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.140885877T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>M4Btlr</sup>";symbol_text="Card11<M4Btlr>"
5 140885945 NC_000071.6:g.140885945T>C T C . . ANN=C|missense_variant|MODERATE|Card11|108723|transcript|ENSMUST00000085786.6|Coding|16/25|c.2000A>G|p.(Q667R)|2307/127593|2000/3465|667/1155||;allele_of_genes="MGI:1916978";alleles="MGI:6113551";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.140885945T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>M5Btlr</sup>";symbol_text="Card11<M5Btlr>"
5 140891080 NC_000071.6:g.140891080A>T A T . . ANN=T|coding_transcript_intron_variant|LOW|Card11|108723|transcript|ENSMUST00000085786.6|Coding|11/24|c.1571-12T>A|p.(%3D)|1878/127593|1571/3465|524/1155||;allele_of_genes="MGI:1916978";alleles="MGI:3805728";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000071.6:g.140891080A>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>m1Btlr</sup>";symbol_text="Card11<m1Btlr>"
5 140906767 NC_000071.6:g.140906767T>C T C . . ANN=C|missense_variant|MODERATE|Card11|108723|transcript|ENSMUST00000085786.6|Coding|5/25|c.542A>G|p.(Y181C)|849/127593|542/3465|181/1155||;allele_of_genes="MGI:1916978";alleles="MGI:5640756";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000071.6:g.140906767T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Card11<sup>m3Btlr</sup>";symbol_text="Card11<m3Btlr>"
6 18198202 NC_000072.6:g.18198202_18198206delinsAACGTC CAGCT AACGTC . . ANN=AACGTC|frameshift_elongation&complex_substitution|HIGH|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|2/28|c.134_138delCAGCTinsAACGTC|p.(S45fs)|271/152081|134/1803|45/601||,AACGTC|frameshift_variant&complex_substitution|HIGH|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|2/27|c.134_138delCAGCTinsAACGTC|p.(S45fs)|271/152082|134/4431|45/1477||,AACGTC|frameshift_variant&complex_substitution|HIGH|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|2/26|c.134_138delCAGCTinsAACGTC|p.(S45fs)|134/150210|134/4341|45/1447||,AACGTC|frameshift_variant&complex_substitution|HIGH|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|2/12|c.134_138delCAGCTinsAACGTC|p.(S45fs)|187/65885|134/1590|45/530||,AACGTC|frameshift_variant&complex_substitution|HIGH|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|2/28|c.134_138delCAGCTinsAACGTC|p.(S45fs)|271/152081|134/1731|45/577||;allele_of_genes="MGI:88388";alleles="MGI:1857898";geneLevelConsequence="stop_gained,frameshift_variant";hgvs_nomenclature="NC_000072.6:g.18198202_18198206delinsAACGTC";impact="HIGH";soTerm="MNV";strain_id="MGI:2164544";strain_name="129S7/SvEvBrd-Hprt<b-m2>";symbol="Cftr<sup>tm3Bay</sup>";symbol_text="Cftr<tm3Bay>"
6 18214176 NC_000072.6:g.18214176G>A G A . . ANN=A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|4/27|c.350G>A|p.(R117H)|487/152082|350/4431|117/1477||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|4/28|c.350G>A|p.(R117H)|487/152081|350/1803|117/601||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|4/26|c.350G>A|p.(R117H)|350/150210|350/4341|117/1447||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|4/12|c.350G>A|p.(R117H)|403/65885|350/1590|117/530||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|4/28|c.350G>A|p.(R117H)|487/152081|350/1731|117/577||;allele_of_genes="MGI:88388";alleles="MGI:3688281";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.18214176G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Cftr<sup>tm2Mrc</sup>";symbol_text="Cftr<tm2Mrc>"
6 18235200 NC_000072.6:g.18235200_18235203delinsATGC GGGA ATGC . . ANN=ATGC|mnv|HIGH|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|11/27|c.1437_1440delGGGAinsATGC|p.(G480C)|1574/152082|1437/4431|479/1477||,ATGC|mnv|HIGH|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|11/28|c.1437_1440delGGGAinsATGC|p.(G480C)|1574/152081|1437/1803|479/601||,ATGC|mnv|HIGH|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|10/26|c.1347_1350delGGGAinsATGC|p.(G450C)|1347/150210|1347/4341|449/1447||,ATGC|mnv|HIGH|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|11/12|c.1437_1440delGGGAinsATGC|p.(G480C)|1490/65885|1437/1590|479/530||,ATGC|mnv|HIGH|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|11/28|c.1437_1440delGGGAinsATGC|p.(G480C)|1574/152081|1437/1731|479/577||;allele_of_genes="MGI:88388";alleles="MGI:2177539";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.18235200_18235203delinsATGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cftr<sup>tm2Hgu</sup>";symbol_text="Cftr<tm2Hgu>"
6 18235282 NC_000072.6:g.18235284_18235287del ATCTT A . . ANN=A|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|11/27|c.1521_1524del|p.(I507Mfs*41)|1658/152082|1521/4431|507/1477||INFO_REALIGN_3_PRIME,A|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1803|507/601||INFO_REALIGN_3_PRIME,A|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|10/26|c.1431_1434del|p.(I477Mfs*41)|1431/150210|1431/4341|477/1447||INFO_REALIGN_3_PRIME,A|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|11/12|c.1521_1524del|p.(I507Mfs*44)|1574/65885|1521/1590|507/530||INFO_REALIGN_3_PRIME,A|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1731|507/577||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388";alleles="MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151,MGI:1857151";geneLevelConsequence="frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant";hgvs_nomenclature="NC_000072.6:g.18235284_18235287del";impact="HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH";soTerm="deletion";strain_id="MGI:2165450";strain_name="129S7/SvEvBrd";symbol="Cftr<sup>tm1Kth</sup>";symbol_text="Cftr<tm1Kth>"
6 18235283 NC_000072.6:g.18235284_18235287del TCTTT T . . ANN=T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|11/27|c.1521_1524del|p.(I507Mfs*41)|1658/152082|1521/4431|507/1477||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1803|507/601||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|10/26|c.1431_1434del|p.(I477Mfs*41)|1431/150210|1431/4341|477/1447||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|11/12|c.1521_1524del|p.(I507Mfs*44)|1574/65885|1521/1590|507/530||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1731|507/577||;allele_of_genes="MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388";alleles="MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896,MGI:1857896";geneLevelConsequence="frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant";hgvs_nomenclature="NC_000072.6:g.18235284_18235287del";impact="HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH";soTerm="deletion";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Cftr<sup>tm2Cam</sup>";symbol_text="Cftr<tm2Cam>"
6 18235283 NC_000072.6:g.18235284_18235287del TCTTT T . . ANN=T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|11/27|c.1521_1524del|p.(I507Mfs*41)|1658/152082|1521/4431|507/1477||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1803|507/601||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|10/26|c.1431_1434del|p.(I477Mfs*41)|1431/150210|1431/4341|477/1447||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000129452.7|Coding|11/12|c.1521_1524del|p.(I507Mfs*44)|1574/65885|1521/1590|507/530||,T|frameshift_truncation|HIGH|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|11/28|c.1521_1524del|p.(I507Mfs*41)|1658/152081|1521/1731|507/577||;allele_of_genes="MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388,MGI:88388";alleles="MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899,MGI:1857899";geneLevelConsequence="frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant,frameshift_variant";hgvs_nomenclature="NC_000072.6:g.18235284_18235287del";impact="HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH,HIGH";soTerm="deletion";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cftr<sup>tm1Eur</sup>";symbol_text="Cftr<tm1Eur>"
6 18255447 NC_000072.6:g.18255447G>A G A . . ANN=A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000045706.11|Coding|12/27|c.1652G>A|p.(G551D)|1789/152082|1652/4431|551/1477||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000115405.8|Coding|12/28|c.1652G>A|p.(G551D)|1789/152081|1652/1803|551/601||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000115406.1|Coding|11/26|c.1562G>A|p.(G521D)|1562/150210|1562/4341|521/1447||,A|missense_variant|MODERATE|Cftr|12638|transcript|ENSMUST00000140407.7|Coding|12/28|c.1652G>A|p.(G551D)|1789/152081|1652/1731|551/577||,A|non_coding_transcript_exon_variant|LOW|Cftr|12638|transcript|ENSMUST00000140532.1|Noncoding|1/4|n.224G>A||224/12907||||;allele_of_genes="MGI:88388";alleles="MGI:2177540";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.18255447G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cftr<sup>tm3Hgu</sup>";symbol_text="Cftr<tm3Hgu>"
6 29068972 NC_000072.6:g.29068972T>A T A . . ANN=A|stop_gained|HIGH|Lep|16846|transcript|ENSMUST00000069789.11|Coding|2/3|c.21T>A|p.(C7*)|81/13658|21/504|7/168||,A|stop_gained|HIGH|Lep|16846|transcript|ENSMUST00000169505.1|Coding|2/3|c.21T>A|p.(C7*)|147/5511|21/294|7/98||;allele_of_genes="MGI:104663";alleles="MGI:5447548";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.29068972T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lep<sup>m1Btlr</sup>";symbol_text="Lep<m1Btlr>"
6 29069090 NC_000072.6:g.29069090C>A C A . . ANN=A|missense_variant|MODERATE|Lep|16846|transcript|ENSMUST00000069789.11|Coding|2/3|c.139C>A|p.(H47N)|199/13658|139/504|47/168||,A|missense_variant|MODERATE|Lep|16846|transcript|ENSMUST00000169505.1|Coding|2/3|c.139C>A|p.(H47N)|265/5511|139/294|47/98||;allele_of_genes="MGI:104663";alleles="MGI:5789539";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.29069090C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lep<sup>m2Btlr</sup>";symbol_text="Lep<m2Btlr>"
6 29071112 NC_000072.6:g.29071112T>A T A . . ANN=A|missense_variant|MODERATE|Lep|16846|transcript|ENSMUST00000069789.11|Coding|3/3|c.434T>A|p.(V145E)|494/13658|434/504|145/168||;allele_of_genes="MGI:104663";alleles="MGI:4880027";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.29071112T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lep<sup>m1Yst</sup>";symbol_text="Lep<m1Yst>"
6 29756874 NC_000072.6:g.29756874G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Smo|319757|transcript|ENSMUST00000001812.4|Coding|7/11|c.1369+1G>A|p.?|1687/25672|1370/2382|457/794||;allele_of_genes="MGI:108075";alleles="MGI:5770717";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000072.6:g.29756874G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3055581";strain_name="C57BL/6JJcl";symbol="Smo<sup>rgsc02073</sup>";symbol_text="Smo<rgsc02073>"
6 37915247 NC_000072.6:g.37915247T>A T A . . ANN=A|stop_gained|HIGH|Trim24|21848|transcript|ENSMUST00000031859.13|Coding|4/19|c.714T>A|p.(C238*)|1014/95486|714/3156|238/1052||,A|stop_gained|HIGH|Trim24|21848|transcript|ENSMUST00000120238.1|Coding|4/19|c.504T>A|p.(C168*)|594/65446|504/2946|168/982||,A|stop_gained|HIGH|Trim24|21848|transcript|ENSMUST00000120428.7|Coding|4/19|c.714T>A|p.(C238*)|1014/95486|714/3054|238/1018||,A|non_coding_transcript_exon_variant|LOW|Trim24|21848|transcript|ENSMUST00000123007.1|Noncoding|1/3|n.27T>A||27/12788||||,A|non_coding_transcript_exon_variant|LOW|Trim24|21848|transcript|ENSMUST00000149561.7|Noncoding|5/8|n.528T>A||528/55155||||,A|non_coding_transcript_exon_variant|LOW|Trim24|21848|transcript|ENSMUST00000149828.7|Noncoding|4/8|n.1014T>A||1014/75989||||,A|non_coding_transcript_exon_variant|LOW|Trim24|21848|transcript|ENSMUST00000153004.7|Noncoding|3/4|n.866T>A||866/50695||||;allele_of_genes="MGI:109275";alleles="MGI:5792079";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.37915247T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trim24<sup>mpc232H</sup>";symbol_text="Trim24<mpc232H>"
6 41622978 NC_000072.6:g.41622978_41622980delinsGGC AT GG . . ANN=GG|mnv|HIGH|Trpv6|64177|transcript|ENSMUST00000031902.6|Coding|13/15|c.1742_1743delATinsCC|p.(D581A)|1917/15782|1742/2304|581/768||,GG|mnv|HIGH|Trpv6|64177|transcript|ENSMUST00000201471.4|Coding|13/15|c.1742_1743delATinsCC|p.(D581A)|1742/15163|1742/2304|581/768||;allele_of_genes="MGI:1096338,MGI:1096338";alleles="MGI:5430771,MGI:5430771";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000072.6:g.41622978_41622980delinsGGC";impact="MODERATE,MODIFIER";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Ephb6/Trpv6<sup>tm1.1Mfre</sup>";symbol_text="Ephb6/Trpv6<tm1.1Mfre>"
6 49045385 NC_000072.6:g.49045385C>T C T . . ANN=T|stop_gained|HIGH|Gpnmb|93695|transcript|ENSMUST00000031840.9|Coding|4/11|c.448C>T|p.(R150*)|556/21568|448/1725|150/575||,T|stop_gained|HIGH|Gpnmb|93695|transcript|ENSMUST00000204260.1|Coding|4/11|c.448C>T|p.(R150*)|494/34253|448/1581|150/527||;allele_of_genes="MGI:1934765";alleles="MGI:2177814";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.49045385C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2684695";strain_name="DBA/2J";symbol="Gpnmb<sup>R150X</sup>";symbol_text="Gpnmb<R150X>"
6 56780389 NC_000072.6:g.56780389G>A G A . . ANN=A|stop_gained|HIGH|Kbtbd2|210973|transcript|ENSMUST00000114321.1|Coding|4/4|c.361C>T|p.(R121*)|1004/20289|361/1872|121/624||,A|stop_gained|HIGH|Kbtbd2|210973|transcript|ENSMUST00000114323.7|Coding|4/4|c.361C>T|p.(R121*)|951/20213|361/1872|121/624||;allele_of_genes="MGI:2384811";alleles="MGI:5806297";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.56780389G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kbtbd2<sup>m1Btlr</sup>";symbol_text="Kbtbd2<m1Btlr>"
6 64429694 NC_000072.6:g.64429694T>A T A . . ANN=A|stop_gained|HIGH|Grid2|14804|transcript|ENSMUST00000095852.4|Coding|13/16|c.2037T>A|p.(Y679*)|2867/1412259|2037/3024|679/1008||;allele_of_genes="MGI:95813";alleles="MGI:5691954";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.64429694T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Grid2<sup>ho-2Btlr</sup>";symbol_text="Grid2<ho-2Btlr>"
6 64729922 NC_000072.6:g.64729922G>A G A . . ANN=A|missense_variant|MODERATE|Atoh1|11921|transcript|ENSMUST00000101351.5|Coding|1/1|c.600G>A|p.(M200I)|798/2121|600/1056|200/352||;allele_of_genes="MGI:104654";alleles="MGI:2656758";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.64729922G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651217";strain_name="129_x_C57BL/6J";symbol="Atoh1<sup>trhl</sup>";symbol_text="Atoh1<trhl>"
6 71326340 NC_000072.6:g.71326340T>A T A . . ANN=A|missense_variant|MODERATE|Cd8b1|12526|transcript|ENSMUST00000065248.8|Coding|2/6|c.398T>A|p.(L133Q)|467/14707|398/642|133/214||;allele_of_genes="MGI:88347";alleles="MGI:6304443";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.71326340T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cd8b1<sup>m2Btlr</sup>";symbol_text="Cd8b1<m2Btlr>"
6 83182664 NC_000072.6:g.83182664_83182667delinsCTGA GGGC CTGA . . ANN=CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000077407.11|Coding|2/28|c.123_126delGGGCinsCTGA|p.(G42*)|216/34197|123/3720|41/1240||,CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000113913.7|Coding|2/32|c.123_126delGGGCinsCTGA|p.(G42*)|185/34167|123/3795|41/1265||,CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000113918.7|Coding|2/31|c.174_177delGGGCinsCTGA|p.(G59*)|458/20528|174/3732|58/1244||,CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000113919.9|Coding|2/32|c.174_177delGGGCinsCTGA|p.(G59*)|461/20385|174/3846|58/1282||,CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000130212.7|Coding|2/6|c.123_126delGGGCinsCTGA|p.(G42*)|206/23579|123/569|41/189||,CTGA|mnv&stop_gained|HIGH|Dctn1|13191|transcript|ENSMUST00000141680.7|Coding|2/8|c.123_126delGGGCinsCTGA|p.(G42*)|340/9541|123/479|41/159||;allele_of_genes="MGI:107745";alleles="MGI:3522484";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.83182664_83182667delinsCTGA";impact="HIGH";soTerm="MNV";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Dctn1<sup>tm1Cai</sup>";symbol_text="Dctn1<tm1Cai>"
6 83752165 NC_000072.6:g.83752165G>A G A . . ANN=A|missense_variant|MODERATE|Atp6v1b1|110935|transcript|ENSMUST00000006431.7|Coding|3/14|c.233G>A|p.(G78D)|328/15866|233/1542|78/514||,A|missense_variant|MODERATE|Atp6v1b1|110935|transcript|ENSMUST00000205763.1|Coding|4/8|c.260G>A|p.(G87D)|260/11666|260/647|87/215||,A|non_coding_transcript_exon_variant|LOW|Atp6v1b1|110935|transcript|ENSMUST00000206652.1|Noncoding|1/4|n.333G>A||333/2034||||;allele_of_genes="MGI:103285";alleles="MGI:5469980";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.83752165G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159968";strain_name="MRL/MpJ-Fas<lpr>/J";symbol="Atp6v1b1<sup>vtx</sup>";symbol_text="Atp6v1b1<vtx>"
6 85610938 NC_000072.6:g.85610938T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Alms1|236266|transcript|ENSMUST00000072018.5|Coding|6/22|c.1080+2T>C|p.?|1196/115223|1081/9756|361/3252||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Alms1|236266|transcript|ENSMUST00000213058.1|Coding|6/22|c.2487+2T>C|p.?|2488/114993|2488/11163|830/3721||;allele_of_genes="MGI:1934606";alleles="MGI:5810779";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000072.6:g.85610938T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Alms1<sup>tvrm102</sup>";symbol_text="Alms1<tvrm102>"
6 85620369 NC_000072.6:g.85620369A>T A T . . ANN=T|stop_gained|HIGH|Alms1|236266|transcript|ENSMUST00000072018.5|Coding|8/23|c.2176A>T|p.(R726*)|2291/115223|2176/9756|726/3252||,T|stop_gained|HIGH|Alms1|236266|transcript|ENSMUST00000213058.1|Coding|8/23|c.3583A>T|p.(R1195*)|3583/114993|3583/11163|1195/3721||;allele_of_genes="MGI:1934606";alleles="MGI:6305831";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.85620369A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Alms1<sup>m6Btlr</sup>";symbol_text="Alms1<m6Btlr>"
6 85621275 NC_000072.6:g.85621275C>T C T . . ANN=T|stop_gained|HIGH|Alms1|236266|transcript|ENSMUST00000072018.5|Coding|8/23|c.3082C>T|p.(Q1028*)|3197/115223|3082/9756|1028/3252||,T|stop_gained|HIGH|Alms1|236266|transcript|ENSMUST00000213058.1|Coding|8/23|c.4489C>T|p.(Q1497*)|4489/114993|4489/11163|1497/3721||;allele_of_genes="MGI:1934606";alleles="MGI:5619129";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.85621275C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Alms1<sup>m1Btlr</sup>";symbol_text="Alms1<m1Btlr>"
6 85817688 NC_000072.6:g.85817688T>A T A . . ANN=A|missense_variant|MODERATE|Nat8f5|69049|transcript|ENSMUST00000032074.4|Coding|3/3|c.289A>T|p.(I97F)|516/3755|289/684|97/228||,A|5_prime_UTR_intron_variant|LOW|Nat8f6|100504710|transcript|ENSMUST00000174143.1|Coding|2/3|c.-295+2937A>T|p.(%3D)|136/12931|1/681|1/227||;allele_of_genes="MGI:1916299,MGI:1916299";alleles="MGI:5696519,MGI:5696519";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000072.6:g.85817688T>A";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nat8f5<sup>b2b1702.1Clo</sup>";symbol_text="Nat8f5<b2b1702.1Clo>"
6 87429360 NC_000072.6:g.87429360A>G A G . . ANN=G|missense_variant|MODERATE|Bmp10|12154|transcript|ENSMUST00000032125.6|Coding|1/2|c.328A>G|p.(N110D)|367/8684|328/1266|110/422||;allele_of_genes="MGI:1338820";alleles="MGI:5616117";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.87429360A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Bmp10<sup>b2b2711Clo</sup>";symbol_text="Bmp10<b2b2711Clo>"
6 97993115 NC_000072.6:g.97993115G>A G A . . ANN=A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|1/8|c.34-12G>A|p.(%3D)|163/26916|34/1260|12/420||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|2/9|c.355-12G>A|p.(%3D)|481/214292|355/1581|119/527||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|2/9|c.307-12G>A|p.(%3D)|386/88909|307/1533|103/511||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|1/8|c.280-12G>A|p.(%3D)|386/77790|280/1506|94/502||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|1/8|c.34-12G>A|p.(%3D)|136/26679|34/318|12/106||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|2/9|c.355-12G>A|p.(%3D)|487/211542|355/1563|119/521||,A|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|1/8|c.34-12G>A|p.(%3D)|34/26255|34/1074|12/358||;allele_of_genes="MGI:104554";alleles="MGI:1857423";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000072.6:g.97993115G>A";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:5653413";strain_name="BKS.Cg-m+/+Lepr<db>";symbol="Mitf<sup>mi-bws</sup>";symbol_text="Mitf<mi-bws>"
6 97993310 NC_000072.6:g.97993310_97993311delinsGC AG GC . . ANN=GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|2/9|c.217_218delAGinsGC|p.(S73A)|346/26916|217/1260|73/420||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|3/10|c.538_539delAGinsGC|p.(S180A)|664/214292|538/1581|180/527||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|3/10|c.490_491delAGinsGC|p.(S164A)|569/88909|490/1533|164/511||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|2/9|c.463_464delAGinsGC|p.(S155A)|569/77790|463/1506|155/502||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|2/9|c.217_218delAGinsGC|p.(S73A)|319/26679|217/318|73/106||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|3/10|c.538_539delAGinsGC|p.(S180A)|670/211542|538/1563|180/521||,GC|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|2/8|c.93+124_93+125delAGinsGC|p.(%3D)|94/26255|94/1074|32/358||;allele_of_genes="MGI:104554,MGI:104554,MGI:104554,MGI:104554";alleles="MGI:3774153,MGI:3774153,MGI:3774153,MGI:3774153";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000072.6:g.97993310_97993311delinsGC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5653465";strain_name="129S1/Sv-Oca2<+>_Tyr<+>_Kitl<+>";symbol="Mitf<sup>tm1Arnh</sup>";symbol_text="Mitf<tm1Arnh>"
6 97993310 NC_000072.6:g.97993310_97993311delinsGC AG GC . . ANN=GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|2/9|c.217_218delAGinsGC|p.(S73A)|346/26916|217/1260|73/420||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|3/10|c.538_539delAGinsGC|p.(S180A)|664/214292|538/1581|180/527||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|3/10|c.490_491delAGinsGC|p.(S164A)|569/88909|490/1533|164/511||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|2/9|c.463_464delAGinsGC|p.(S155A)|569/77790|463/1506|155/502||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|2/9|c.217_218delAGinsGC|p.(S73A)|319/26679|217/318|73/106||,GC|mnv|HIGH|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|3/10|c.538_539delAGinsGC|p.(S180A)|670/211542|538/1563|180/521||,GC|coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|2/8|c.93+124_93+125delAGinsGC|p.(%3D)|94/26255|94/1074|32/358||;allele_of_genes="MGI:104554,MGI:104554,MGI:104554,MGI:104554";alleles="MGI:3774164,MGI:3774164,MGI:3774164,MGI:3774164";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000072.6:g.97993310_97993311delinsGC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5653465";strain_name="129S1/Sv-Oca2<+>_Tyr<+>_Kitl<+>";symbol="Mitf<sup>tm1.2Arnh</sup>";symbol_text="Mitf<tm1.2Arnh>"
6 98006183 NC_000072.6:g.98006183A>G A G . . ANN=G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|6/9|c.620A>G|p.(D207G)|749/26916|620/1260|207/420||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|7/10|c.941A>G|p.(D314G)|1067/214292|941/1581|314/527||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|7/10|c.893A>G|p.(D298G)|972/88909|893/1533|298/511||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|6/9|c.866A>G|p.(D289G)|972/77790|866/1506|289/502||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|7/10|c.923A>G|p.(D308G)|1055/211542|923/1563|308/521||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|6/9|c.434A>G|p.(D145G)|434/26255|434/1074|145/358||,G|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|6/9|c.*267A>G|p.(%3D)|687/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:2148646";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98006183A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651433";strain_name="(102_x_C3H)F1";symbol="Mitf<sup>mi-enu198</sup>";symbol_text="Mitf<mi-enu198>"
6 98006189 NC_000072.6:g.98006189A>G A G . . ANN=G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|6/9|c.626A>G|p.(H209R)|755/26916|626/1260|209/420||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|7/10|c.947A>G|p.(H316R)|1073/214292|947/1581|316/527||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|7/10|c.899A>G|p.(H300R)|978/88909|899/1533|300/511||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|6/9|c.872A>G|p.(H291R)|978/77790|872/1506|291/502||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|7/10|c.929A>G|p.(H310R)|1061/211542|929/1563|310/521||,G|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|6/9|c.440A>G|p.(H147R)|440/26255|440/1074|147/358||,G|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|6/9|c.*273A>G|p.(%3D)|693/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:3040389";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98006189A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653044";strain_name="(102_x_C3H/El)F1";symbol="Mitf<sup>mi-enu5</sup>";symbol_text="Mitf<mi-enu5>"
6 98006201 NC_000072.6:g.98006201A>T A T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|6/8|c.634+4A>T|p.?|764/26916|635/1260|212/420||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|7/9|c.955+4A>T|p.?|1082/214292|956/1581|319/527||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|7/9|c.907+4A>T|p.?|987/88909|908/1533|303/511||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|6/8|c.880+4A>T|p.?|987/77790|881/1506|294/502||,T|splice_region_variant&3_prime_UTR_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|6/8|c.*281+4A>T|p.(%3D)|702/26679|319/318|107/106||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|7/9|c.937+4A>T|p.?|1070/211542|938/1563|313/521||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|6/8|c.448+4A>T|p.?|449/26255|449/1074|150/358||;allele_of_genes="MGI:104554";alleles="MGI:1856094";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000072.6:g.98006201A>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:2164879";strain_name="C57BL/6Bn";symbol="Mitf<sup>mi-ew</sup>";symbol_text="Mitf<mi-ew>"
6 98010395 NC_000072.6:g.98010395T>A T A . . ANN=A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|7/9|c.635T>A|p.(I212N)|764/26916|635/1260|212/420||,A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|8/10|c.956T>A|p.(I319N)|1082/214292|956/1581|319/527||,A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|8/10|c.908T>A|p.(I303N)|987/88909|908/1533|303/511||,A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|7/9|c.881T>A|p.(I294N)|987/77790|881/1506|294/502||,A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|8/10|c.938T>A|p.(I313N)|1070/211542|938/1563|313/521||,A|missense_variant&splice_region_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|7/9|c.449T>A|p.(I150N)|449/26255|449/1074|150/358||,A|splice_region_variant&3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|7/9|c.*282T>A|p.(%3D)|702/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:1856088";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000072.6:g.98010395T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651324";strain_name="(C57BL_x_DBA)F1";symbol="Mitf<sup>Mi-wh</sup>";symbol_text="Mitf<Mi-wh>"
6 98010407 NC_000072.6:g.98010407G>A G A . . ANN=A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|7/9|c.647G>A|p.(R216K)|776/26916|647/1260|216/420||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|8/10|c.968G>A|p.(R323K)|1094/214292|968/1581|323/527||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|8/10|c.920G>A|p.(R307K)|999/88909|920/1533|307/511||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|7/9|c.893G>A|p.(R298K)|999/77790|893/1506|298/502||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|8/10|c.950G>A|p.(R317K)|1082/211542|950/1563|317/521||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|7/9|c.461G>A|p.(R154K)|461/26255|461/1074|154/358||,A|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|7/9|c.*294G>A|p.(%3D)|714/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:1856087";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98010407G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651768";strain_name="(101/Rl_x_C3H/Rl)F1";symbol="Mitf<sup>Mi-Or</sup>";symbol_text="Mitf<Mi-Or>"
6 98010424 NC_000072.6:g.98010424G>A G A . . ANN=A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|7/9|c.664G>A|p.(D222N)|793/26916|664/1260|222/420||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|8/10|c.985G>A|p.(D329N)|1111/214292|985/1581|329/527||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|8/10|c.937G>A|p.(D313N)|1016/88909|937/1533|313/511||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|7/9|c.910G>A|p.(D304N)|1016/77790|910/1506|304/502||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|8/10|c.967G>A|p.(D323N)|1099/211542|967/1563|323/521||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|7/9|c.478G>A|p.(D160N)|478/26255|478/1074|160/358||,A|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|7/9|c.*311G>A|p.(%3D)|731/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:1856095";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98010424G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mitf<sup>mi-vit</sup>";symbol_text="Mitf<mi-vit>"
6 98010430 NC_000072.6:g.98010430A>T A T . . ANN=T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|7/9|c.670A>T|p.(I224F)|799/26916|670/1260|224/420||,T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|8/10|c.991A>T|p.(I331F)|1117/214292|991/1581|331/527||,T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|8/10|c.943A>T|p.(I315F)|1022/88909|943/1533|315/511||,T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|7/9|c.916A>T|p.(I306F)|1022/77790|916/1506|306/502||,T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|8/10|c.973A>T|p.(I325F)|1105/211542|973/1563|325/521||,T|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|7/9|c.484A>T|p.(I162F)|484/26255|484/1074|162/358||,T|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|7/9|c.*317A>T|p.(%3D)|737/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:1857751";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98010430A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651433";strain_name="(102_x_C3H)F1";symbol="Mitf<sup>mi-enu122</sup>";symbol_text="Mitf<mi-enu122>"
6 98013689 NC_000072.6:g.98013689G>A G A . . ANN=A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|8/9|c.731G>A|p.(G244E)|860/26916|731/1260|244/420||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|9/10|c.1052G>A|p.(G351E)|1178/214292|1052/1581|351/527||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|9/10|c.1004G>A|p.(G335E)|1083/88909|1004/1533|335/511||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|8/9|c.977G>A|p.(G326E)|1083/77790|977/1506|326/502||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|9/10|c.1034G>A|p.(G345E)|1166/211542|1034/1563|345/521||,A|missense_variant|MODERATE|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|8/9|c.545G>A|p.(G182E)|545/26255|545/1074|182/358||,A|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|8/9|c.*378G>A|p.(%3D)|798/26679|319/318|107/106||;allele_of_genes="MGI:104554";alleles="MGI:1856086";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.98013689G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5657278";strain_name="T_stock_x_(101/Rl_x_C3H/Rl)F1";symbol="Mitf<sup>Mi-b</sup>";symbol_text="Mitf<Mi-b>"
6 98013745 NC_000072.6:g.98013745C>T C T . . ANN=T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|8/9|c.787C>T|p.(R263*)|916/26916|787/1260|263/420||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|9/10|c.1108C>T|p.(R370*)|1234/214292|1108/1581|370/527||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|9/10|c.1060C>T|p.(R354*)|1139/88909|1060/1533|354/511||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|8/9|c.1033C>T|p.(R345*)|1139/77790|1033/1506|345/502||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|9/10|c.1090C>T|p.(R364*)|1222/211542|1090/1563|364/521||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|8/9|c.601C>T|p.(R201*)|601/26255|601/1074|201/358||,T|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|8/9|c.*434C>T|p.(%3D)|854/26679|319/318|107/106||;allele_of_genes="MGI:104554,MGI:104554,MGI:104554,MGI:104554";alleles="MGI:1856532,MGI:1856532,MGI:1856532,MGI:1856532";geneLevelConsequence="stop_gained,stop_gained,stop_gained,stop_gained";hgvs_nomenclature="NC_000072.6:g.98013745C>T";impact="HIGH,HIGH,HIGH,HIGH";soTerm="point_mutation";strain_id="MGI:2159796";strain_name="DBA/2N";symbol="Mitf<sup>mi-ce</sup>";symbol_text="Mitf<mi-ce>"
6 98013745 NC_000072.6:g.98013745C>T C T . . ANN=T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000043628.12|Coding|8/9|c.787C>T|p.(R263*)|916/26916|787/1260|263/420||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000043637.13|Coding|9/10|c.1108C>T|p.(R370*)|1234/214292|1108/1581|370/527||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000101123.9|Coding|9/10|c.1060C>T|p.(R354*)|1139/88909|1060/1533|354/511||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000113339.7|Coding|8/9|c.1033C>T|p.(R345*)|1139/77790|1033/1506|345/502||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000203884.2|Coding|9/10|c.1090C>T|p.(R364*)|1222/211542|1090/1563|364/521||,T|stop_gained|HIGH|Mitf|17342|transcript|ENSMUST00000203938.1|Coding|8/9|c.601C>T|p.(R201*)|601/26255|601/1074|201/358||,T|3_prime_UTR_exon_variant|LOW|Mitf|17342|transcript|ENSMUST00000139462.1|Coding|8/9|c.*434C>T|p.(%3D)|854/26679|319/318|107/106||;allele_of_genes="MGI:104554,MGI:104554,MGI:104554,MGI:104554";alleles="MGI:1856090,MGI:1856090,MGI:1856090,MGI:1856090";geneLevelConsequence="stop_gained,stop_gained,stop_gained,stop_gained";hgvs_nomenclature="NC_000072.6:g.98013745C>T";impact="HIGH,HIGH,HIGH,HIGH";soTerm="point_mutation";strain_id="MGI:5651389";strain_name="(PT_x_C3H/HeH)F1";symbol="Mitf<sup>mi-di</sup>";symbol_text="Mitf<mi-di>"
6 111495791 NC_000072.6:g.111495791A>T A T . . ANN=T|stop_gained|HIGH|Grm7|108073|transcript|ENSMUST00000071076.12|Coding|9/11|c.2590A>T|p.(K864*)|2877/920487|2590/2769|864/923||,T|stop_gained|HIGH|Grm7|108073|transcript|ENSMUST00000172951.1|Coding|9/10|c.2590A>T|p.(K864*)|2876/921649|2590/2748|864/916||,T|missense_variant|MODERATE|Grm7|108073|transcript|ENSMUST00000173001.2|Coding|1/2|c.77A>T|p.(Q26L)|77/4219|77/223|26/74||,T|synonymous_variant|LOW|Grm7|108073|transcript|ENSMUST00000174310.1|Coding|1/3|c.48A>T|p.(%3D)|48/6541|48/227|16/75||,T|3_prime_UTR_exon_variant|LOW|Grm7|108073|transcript|ENSMUST00000174018.7|Coding|10/10|c.*2057A>T|p.(%3D)|2911/851510|568/567|190/189||;allele_of_genes="MGI:1351344";alleles="MGI:5688492";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.111495791A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Grm7<sup>m1Btlr</sup>";symbol_text="Grm7<m1Btlr>"
6 113624141 NC_000072.6:g.113624141_113624143delinsCTA ATG CTA . . ANN=CTA|start_lost|HIGH|Vhl|22346|transcript|ENSMUST00000035673.7|Coding|1/3|c.1_3delATGinsCTA|p.0?|183/7675|1/546|1/182||;allele_of_genes="MGI:103223";alleles="MGI:5529337";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000072.6:g.113624141_113624143delinsCTA";impact="HIGH";soTerm="MNV";strain_id="MGI:2160041";strain_name="129";symbol="Vhl<sup>tm1.1Whkr</sup>";symbol_text="Vhl<tm1.1Whkr>"
6 113629421 NC_000072.6:g.113629421G>A G A . . ANN=A|missense_variant|MODERATE|Vhl|22346|transcript|ENSMUST00000035673.7|Coding|3/3|c.398G>A|p.(R133Q)|580/7675|398/546|133/182||,A|non_coding_transcript_exon_variant|LOW|Vhl|22346|transcript|ENSMUST00000128770.7|Noncoding|3/3|n.242G>A||242/5041||||,A|non_coding_transcript_exon_variant|LOW|Vhl|22346|transcript|ENSMUST00000131819.1|Noncoding|3/3|n.283G>A||283/4629||||;allele_of_genes="MGI:103223";alleles="MGI:4436910";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113629421G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Vhl<sup>tm1.1Wkr</sup>";symbol_text="Vhl<tm1.1Wkr>"
6 113629519 NC_000072.6:g.113629519_113629521delinsTGG CGA TGG . . ANN=TGG|mnv|HIGH|Vhl|.|transcript|ENSMUST00000204915.1|Coding|1/2|c.13_15delCGAinsTGG|p.(R5W)|13/2121|13/63|5/21||,TGG|mnv|HIGH|Vhl|22346|transcript|ENSMUST00000035673.7|Coding|3/3|c.496_498delCGAinsTGG|p.(R166W)|678/7675|496/546|166/182||,TGG|non_coding_transcript_exon_variant|LOW|Vhl|22346|transcript|ENSMUST00000128770.7|Noncoding|3/3|n.340_342delCGAinsTGG||340/5041||||,TGG|non_coding_transcript_exon_variant|LOW|Vhl|22346|transcript|ENSMUST00000131819.1|Noncoding|3/3|n.381_383delCGAinsTGG||381/4629||||;allele_of_genes="MGI:103223";alleles="MGI:3776030";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113629519_113629521delinsTGG";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Vhl<sup>tm1Mcs</sup>";symbol_text="Vhl<tm1Mcs>"
6 113758953 NC_000072.6:g.113758953A>C A C . . ANN=C|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|18/20|c.3068T>G|p.(I1023S)|3670/145871|3068/3597|1023/1199||,C|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|22/24|c.3203T>G|p.(I1068S)|3814/186388|3203/3732|1068/1244||,C|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|20/22|c.3068T>G|p.(I1023S)|3642/298196|3068/3597|1023/1199||,C|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|20/24|c.3068T>G|p.(I1023S)|3631/296346|3068/3465|1023/1155||,C|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|18/20|c.3056T>G|p.(I1019S)|3658/144474|3056/3585|1019/1195||;allele_of_genes="MGI:105368";alleles="MGI:5505456";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113758953A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161072";strain_name="BALB/c";symbol="Atp2b2<sup>Deaf11</sup>";symbol_text="Atp2b2<Deaf11>"
6 113760650 NC_000072.6:g.113760650A>G A G . . ANN=G|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|16/20|c.2774T>C|p.(L925P)|3376/145871|2774/3597|925/1199||,G|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|20/24|c.2909T>C|p.(L970P)|3520/186388|2909/3732|970/1244||,G|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|18/22|c.2774T>C|p.(L925P)|3348/298196|2774/3597|925/1199||,G|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|18/24|c.2774T>C|p.(L925P)|3337/296346|2774/3465|925/1155||,G|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|16/20|c.2762T>C|p.(L921P)|3364/144474|2762/3585|921/1195||;allele_of_genes="MGI:105368";alleles="MGI:5640789";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113760650A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atp2b2<sup>m1Btlr</sup>";symbol_text="Atp2b2<m1Btlr>"
6 113760794 NC_000072.6:g.113760794G>A G A . . ANN=A|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|16/20|c.2630C>T|p.(S877F)|3232/145871|2630/3597|877/1199||,A|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|20/24|c.2765C>T|p.(S922F)|3376/186388|2765/3732|922/1244||,A|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|18/22|c.2630C>T|p.(S877F)|3204/298196|2630/3597|877/1199||,A|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|18/24|c.2630C>T|p.(S877F)|3193/296346|2630/3465|877/1155||,A|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|16/20|c.2618C>T|p.(S873F)|3220/144474|2618/3585|873/1195||;allele_of_genes="MGI:105368";alleles="MGI:4355879";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113760794G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Atp2b2<sup>Obv</sup>";symbol_text="Atp2b2<Obv>"
6 113766094 NC_000072.6:g.113766094G>T G T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|12/20|c.2075C>A|p.(T692K)|2677/145871|2075/3597|692/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|16/24|c.2210C>A|p.(T737K)|2821/186388|2210/3732|737/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|14/22|c.2075C>A|p.(T692K)|2649/298196|2075/3597|692/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|14/24|c.2075C>A|p.(T692K)|2638/296346|2075/3465|692/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|12/20|c.2063C>A|p.(T688K)|2665/144474|2063/3585|688/1195||;allele_of_genes="MGI:105368";alleles="MGI:3641249";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113766094G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atp2b2<sup>m1Mae</sup>";symbol_text="Atp2b2<m1Mae>"
6 113773298 NC_000072.6:g.113773298A>T A T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|11/20|c.1964T>A|p.(I655N)|2566/145871|1964/3597|655/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|15/24|c.2099T>A|p.(I700N)|2710/186388|2099/3732|700/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|13/22|c.1964T>A|p.(I655N)|2538/298196|1964/3597|655/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|13/24|c.1964T>A|p.(I655N)|2527/296346|1964/3465|655/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|11/20|c.1964T>A|p.(I655N)|2566/144474|1964/3585|655/1195||;allele_of_genes="MGI:105368";alleles="MGI:5554594";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113773298A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atp2b2<sup>Elfin</sup>";symbol_text="Atp2b2<Elfin>"
6 113774221 NC_000072.6:g.113774221C>T C T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|10/20|c.1750G>A|p.(E584K)|2352/145871|1750/3597|584/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|14/24|c.1885G>A|p.(E629K)|2496/186388|1885/3732|629/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|12/22|c.1750G>A|p.(E584K)|2324/298196|1750/3597|584/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|12/24|c.1750G>A|p.(E584K)|2313/296346|1750/3465|584/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|10/20|c.1750G>A|p.(E584K)|2352/144474|1750/3585|584/1195||;allele_of_genes="MGI:105368";alleles="MGI:2158375";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113774221C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161072";strain_name="BALB/c";symbol="Atp2b2<sup>Tmy</sup>";symbol_text="Atp2b2<Tmy>"
6 113774233 NC_000072.6:g.113774233T>A T A . . ANN=A|stop_gained|HIGH|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|10/20|c.1738A>T|p.(K580*)|2340/145871|1738/3597|580/1199||,A|stop_gained|HIGH|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|14/24|c.1873A>T|p.(K625*)|2484/186388|1873/3732|625/1244||,A|stop_gained|HIGH|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|12/22|c.1738A>T|p.(K580*)|2312/298196|1738/3597|580/1199||,A|stop_gained|HIGH|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|12/24|c.1738A>T|p.(K580*)|2301/296346|1738/3465|580/1155||,A|stop_gained|HIGH|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|10/20|c.1738A>T|p.(K580*)|2340/144474|1738/3585|580/1195||;allele_of_genes="MGI:105368";alleles="MGI:5636635";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000072.6:g.113774233T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2684695";strain_name="DBA/2J";symbol="Atp2b2<sup>dfw-i5</sup>";symbol_text="Atp2b2<dfw-i5>"
6 113774290 NC_000072.6:g.113774290G>T G T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|10/20|c.1681C>A|p.(R561S)|2283/145871|1681/3597|561/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|14/24|c.1816C>A|p.(R606S)|2427/186388|1816/3732|606/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|12/22|c.1681C>A|p.(R561S)|2255/298196|1681/3597|561/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|12/24|c.1681C>A|p.(R561S)|2244/296346|1681/3465|561/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|10/20|c.1681C>A|p.(R561S)|2283/144474|1681/3585|561/1195||;allele_of_genes="MGI:105368";alleles="MGI:5505458";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113774290G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161072";strain_name="BALB/c";symbol="Atp2b2<sup>Deaf13</sup>";symbol_text="Atp2b2<Deaf13>"
6 113789905 NC_000072.6:g.113789907_113789909del TTCC T . . ANN=T|inframe_deletion|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|9/20|c.1369_1371del|p.(G457del)|1971/145871|1369/3597|457/1199||,T|inframe_deletion|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|13/24|c.1504_1506del|p.(G502del)|2115/186388|1504/3732|502/1244||,T|inframe_deletion|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|11/22|c.1369_1371del|p.(G457del)|1943/298196|1369/3597|457/1199||,T|inframe_deletion|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|11/24|c.1369_1371del|p.(G457del)|1932/296346|1369/3465|457/1155||,T|inframe_deletion|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|9/20|c.1369_1371del|p.(G457del)|1971/144474|1369/3585|457/1195||;allele_of_genes="MGI:105368";alleles="MGI:1857396";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000072.6:g.113789907_113789909del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2164900";strain_name="CByJ.A-Ttc7<fsn>/J";symbol="Atp2b2<sup>dfw-2J</sup>";symbol_text="Atp2b2<dfw-2J>"
6 113793713 NC_000072.6:g.113793713C>T C T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|8/20|c.1234G>A|p.(E412K)|1836/145871|1234/3597|412/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|12/24|c.1369G>A|p.(E457K)|1980/186388|1369/3732|457/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|10/22|c.1234G>A|p.(E412K)|1808/298196|1234/3597|412/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|10/24|c.1234G>A|p.(E412K)|1797/296346|1234/3465|412/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|8/20|c.1234G>A|p.(E412K)|1836/144474|1234/3585|412/1195||;allele_of_genes="MGI:105368";alleles="MGI:1857092";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113793713C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159843";strain_name="BALB/cAnN";symbol="Atp2b2<sup>wri</sup>";symbol_text="Atp2b2<wri>"
6 113805521 NC_000072.6:g.113805521C>T C T . . ANN=T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000089003.11|Coding|6/20|c.847G>A|p.(G283S)|1449/145871|847/3597|283/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101044.8|Coding|7/24|c.847G>A|p.(G283S)|1458/186388|847/3732|283/1244||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000101045.9|Coding|8/22|c.847G>A|p.(G283S)|1421/298196|847/3597|283/1199||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000152831.7|Coding|8/24|c.847G>A|p.(G283S)|1410/296346|847/3465|283/1155||,T|missense_variant|MODERATE|Atp2b2|11941|transcript|ENSMUST00000205052.2|Coding|6/20|c.847G>A|p.(G283S)|1449/144474|847/3585|283/1195||,T|non_coding_transcript_exon_variant|LOW|Atp2b2|11941|transcript|ENSMUST00000135199.1|Noncoding|6/6|n.1280G>A||1280/88033||||;allele_of_genes="MGI:105368";alleles="MGI:1856799";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.113805521C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159741";strain_name="C3H/HeJ";symbol="Atp2b2<sup>dfw</sup>";symbol_text="Atp2b2<dfw>"
6 115932072 NC_000072.6:g.115932072C>A C A . . ANN=A|missense_variant|MODERATE|Rho|212541|transcript|ENSMUST00000032471.8|Coding|1/5|c.68C>A|p.(P23H)|325/8289|68/1047|23/349||,A|non_coding_transcript_exon_variant|LOW|Rho|212541|transcript|ENSMUST00000203531.1|Noncoding|1/2|n.148C>A||148/2174||||;allele_of_genes="MGI:97914";alleles="MGI:4947230";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.115932072C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Rho<sup>tm1.1Kpal</sup>";symbol_text="Rho<tm1.1Kpal>"
6 115932107 NC_000072.6:g.115932107T>C T C . . ANN=C|missense_variant|MODERATE|Rho|212541|transcript|ENSMUST00000032471.8|Coding|1/5|c.103T>C|p.(W35R)|360/8289|103/1047|35/349||,C|non_coding_transcript_exon_variant|LOW|Rho|212541|transcript|ENSMUST00000203531.1|Noncoding|1/2|n.183T>C||183/2174||||;allele_of_genes="MGI:97914";alleles="MGI:5609882";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.115932107T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rho<sup>Tvrm144</sup>";symbol_text="Rho<Tvrm144>"
6 115933943 NC_000072.6:g.115933943G>A G A . . ANN=A|missense_variant|MODERATE|Rho|212541|transcript|ENSMUST00000032471.8|Coding|2/5|c.448G>A|p.(E150K)|705/8289|448/1047|150/349||,A|missense_variant|MODERATE|Rho|212541|transcript|ENSMUST00000204711.2|Coding|2/5|c.22G>A|p.(E8K)|283/4152|22/609|8/203||,A|non_coding_transcript_exon_variant|LOW|Rho|212541|transcript|ENSMUST00000203531.1|Noncoding|2/2|n.528G>A||528/2174||||;allele_of_genes="MGI:97914";alleles="MGI:5474849";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.115933943G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Rho<sup>tm2.1Kpal</sup>";symbol_text="Rho<tm2.1Kpal>"
6 115935111 NC_000072.6:g.115935111A>G A G . . ANN=G|missense_variant&splice_region_variant|MODERATE|Rho|212541|transcript|ENSMUST00000032471.8|Coding|3/5|c.533A>G|p.(Y178C)|790/8289|533/1047|178/349||,G|missense_variant&splice_region_variant|MODERATE|Rho|212541|transcript|ENSMUST00000203877.1|Coding|2/4|c.56A>G|p.(Y19C)|192/2612|56/570|19/190||,G|missense_variant&splice_region_variant|MODERATE|Rho|212541|transcript|ENSMUST00000204711.2|Coding|3/5|c.107A>G|p.(Y36C)|368/4152|107/609|36/203||,G|coding_transcript_intron_variant|LOW|Rho|212541|transcript|ENSMUST00000204493.1|Coding|1/3|c.54-143A>G|p.(%3D)|159/2701|54/165|18/55||,G|non_coding_transcript_exon_variant|LOW|Rho|212541|transcript|ENSMUST00000203284.1|Noncoding|1/2|n.374A>G||374/1307||||;allele_of_genes="MGI:97914";alleles="MGI:5810761";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000072.6:g.115935111A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5925419";strain_name="B6.Cg-Crb1<rd8>/Pjn";symbol="Rho<sup>Tvrm334</sup>";symbol_text="Rho<Tvrm334>"
6 115960524 NC_000072.6:g.115960524T>C T C . . ANN=C|missense_variant|MODERATE|Plxnd1|67784|transcript|ENSMUST00000015511.14|Coding|27/36|c.4727A>G|p.(D1576G)|4927/40195|4727/5778|1576/1926||;allele_of_genes="MGI:2154244";alleles="MGI:5316780";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.115960524T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Plxnd1<sup>b2b553Clo</sup>";symbol_text="Plxnd1<b2b553Clo>"
6 115962417 NC_000072.6:g.115962417A>T A T . . ANN=T|missense_variant|MODERATE|Plxnd1|67784|transcript|ENSMUST00000015511.14|Coding|25/36|c.4445T>A|p.(M1482K)|4645/40195|4445/5778|1482/1926||;allele_of_genes="MGI:2154244";alleles="MGI:5648017";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.115962417A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Plxnd1<sup>b2b3150Clo</sup>";symbol_text="Plxnd1<b2b3150Clo>"
6 115969307 NC_000072.6:g.115969307C>T C T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Plxnd1|67784|transcript|ENSMUST00000015511.14|Coding|12/35|c.2691+1G>A|p.?|2892/40195|2692/5778|898/1926||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Plxnd1|67784|transcript|ENSMUST00000131590.1|Coding|1/6|c.119+1G>A|p.?|120/2464|120/700|40/233||;allele_of_genes="MGI:2154244";alleles="MGI:5476170";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000072.6:g.115969307C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Plxnd1<sup>b2b1863Clo</sup>";symbol_text="Plxnd1<b2b1863Clo>"
6 117171553 NC_000072.6:g.117171553_117171555delinsTCG AA TC . . ANN=TC|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000073043.4|Coding|2/4|c.133_134delAAinsTC|p.(K45S)|212/12791|133/360|45/120||,TC|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000112866.7|Coding|2/3|c.133_134delAAinsTC|p.(K45S)|254/6535|133/270|45/90||,TC|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000112871.7|Coding|2/4|c.133_134delAAinsTC|p.(K45S)|215/12793|133/282|45/94||,TC|non_coding_transcript_exon_variant|LOW|Cxcl12|20315|transcript|ENSMUST00000134244.1|Noncoding|2/3|n.212_213delAAinsTC||212/7551||||;allele_of_genes="MGI:103556";alleles="MGI:5575859";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.117171553_117171555delinsTCG";impact="MODERATE";soTerm="MNV";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Cxcl12<sup>tm1.1Fass</sup>";symbol_text="Cxcl12<tm1.1Fass>"
6 117171562 NC_000072.6:g.117171562_117171564delinsTCT AAA TCT . . ANN=TCT|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000073043.4|Coding|2/4|c.142_144delAAAinsTCT|p.(K48S)|221/12791|142/360|48/120||,TCT|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000112866.7|Coding|2/3|c.142_144delAAAinsTCT|p.(K48S)|263/6535|142/270|48/90||,TCT|mnv|HIGH|Cxcl12|20315|transcript|ENSMUST00000112871.7|Coding|2/4|c.142_144delAAAinsTCT|p.(K48S)|224/12793|142/282|48/94||,TCT|non_coding_transcript_exon_variant|LOW|Cxcl12|20315|transcript|ENSMUST00000134244.1|Noncoding|2/3|n.221_223delAAAinsTCT||221/7551||||;allele_of_genes="MGI:103556";alleles="MGI:5575859";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.117171562_117171564delinsTCT";impact="MODERATE";soTerm="MNV";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Cxcl12<sup>tm1.1Fass</sup>";symbol_text="Cxcl12<tm1.1Fass>"
6 117176085 NC_000072.6:g.117176086_117176087delinsGTAGG G GGTA . . ANN=GGTA|stop_gained&inframe_insertion|HIGH|Cxcl12|20315|transcript|ENSMUST00000073043.4|Coding|4/4|c.267_268insTAG|p.(G90*)|346/12791|267/360|89/120||INFO_REALIGN_3_PRIME,GGTA|coding_transcript_intron_variant|LOW|Cxcl12|20315|transcript|ENSMUST00000112871.7|Coding|3/3|c.267-2498_267-2497insGTA|p.(%3D)|349/12793|267/282|89/94||,GGTA|non_coding_transcript_exon_variant|LOW|Cxcl12|20315|transcript|ENSMUST00000134244.1|Noncoding|3/3|n.2853_2854insTAG||2853/7551||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:103556";alleles="MGI:5575859";geneLevelConsequence="stop_gained,splice_region_variant";hgvs_nomenclature="NC_000072.6:g.117176086_117176087delinsGTAGG";impact="HIGH";soTerm="MNV";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Cxcl12<sup>tm1.1Fass</sup>";symbol_text="Cxcl12<tm1.1Fass>"
6 118603929 NC_000072.6:g.118603929_118603931delinsGGC AGA GGC . . ANN=GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000075591.12|Coding|41/47|c.5008_5010delTCTinsGCC|p.(S1670A)|5222/515248|5008/6420|1670/2140||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000078320.13|Coding|41/47|c.5008_5010delTCTinsGCC|p.(S1670A)|5222/515726|5008/6420|1670/2140||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112790.8|Coding|41/47|c.5008_5010delTCTinsGCC|p.(S1670A)|5269/515295|5008/6420|1670/2140||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112793.9|Coding|42/48|c.5257_5259delTCTinsGCC|p.(S1753A)|5257/514084|5257/6669|1753/2223||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112825.8|Coding|36/42|c.4198_4200delTCTinsGCC|p.(S1400A)|4592/165656|4198/5610|1400/1870||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000185345.6|Coding|42/48|c.5068_5070delTCTinsGCC|p.(S1690A)|5068/514183|5068/6480|1690/2160||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000186889.6|Coding|41/47|c.5098_5100delTCTinsGCC|p.(S1700A)|5098/608992|5098/6510|1700/2170||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187317.6|Coding|43/49|c.5152_5154delTCTinsGCC|p.(S1718A)|5152/514183|5152/6564|1718/2188||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187386.6|Coding|42/48|c.4996_4998delTCTinsGCC|p.(S1666A)|5401/486209|4996/6408|1666/2136||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187474.6|Coding|41/47|c.5098_5100delTCTinsGCC|p.(S1700A)|5254/602741|5098/6510|1700/2170||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187940.6|Coding|41/47|c.5098_5100delTCTinsGCC|p.(S1700A)|5285/603337|5098/6510|1700/2170||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188078.6|Coding|41/47|c.5008_5010delTCTinsGCC|p.(S1670A)|5008/514183|5008/6420|1670/2140||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188106.6|Coding|41/47|c.5050_5052delTCTinsGCC|p.(S1684A)|5050/514084|5050/6462|1684/2154||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188522.6|Coding|42/48|c.5083_5085delTCTinsGCC|p.(S1695A)|5681/514927|5083/6495|1695/2165||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188865.6|Coding|41/47|c.5008_5010delTCTinsGCC|p.(S1670A)|5008/514183|5008/6420|1670/2140||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000189389.6|Coding|42/48|c.5092_5094delTCTinsGCC|p.(S1698A)|5092/514183|5092/6504|1698/2168||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000189520.6|Coding|41/47|c.5059_5061delTCTinsGCC|p.(S1687A)|5059/514183|5059/6471|1687/2157||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000190285.1|Coding|42/48|c.5173_5175delTCTinsGCC|p.(S1725A)|5173/602340|5173/6585|1725/2195||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219018.1|Coding|38/44|c.4531_4533delTCTinsGCC|p.(S1511A)|4531/188006|4531/5943|1511/1981||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219223.1|Coding|37/43|c.4498_4500delTCTinsGCC|p.(S1500A)|4498/188006|4498/5910|1500/1970||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219833.1|Coding|39/45|c.4606_4608delTCTinsGCC|p.(S1536A)|4606/188006|4606/6018|1536/2006||,GGC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000220022.1|Coding|39/45|c.4780_4782delTCTinsGCC|p.(S1594A)|4780/188006|4780/6192|1594/2064||,GGC|non_coding_transcript_exon_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188181.6|Noncoding|36/42|n.4592_4594delTCTinsGCC||4592/165656||||;allele_of_genes="MGI:103013";alleles="MGI:5662550";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.118603929_118603931delinsGGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Cacna1c<sup>tm2.1Wac</sup>";symbol_text="Cacna1c<tm2.1Wac>"
6 118603929 NC_000072.6:g.118603929_118603931delinsCCAGATCCCCGGC AGA CCAGATCCCCGGC . . ANN=CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000075591.12|Coding|41/47|c.5008_5010delTCTinsGCCGGGGATCTGG|p.(S1670Afs*10)|5222/515248|5008/6420|1670/2140||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000078320.13|Coding|41/47|c.5008_5010delTCTinsGCCGGGGATCTGG|p.(S1670Afs*10)|5222/515726|5008/6420|1670/2140||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000112790.8|Coding|41/47|c.5008_5010delTCTinsGCCGGGGATCTGG|p.(S1670Afs*10)|5269/515295|5008/6420|1670/2140||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000112793.9|Coding|42/48|c.5257_5259delTCTinsGCCGGGGATCTGG|p.(S1753Afs*10)|5257/514084|5257/6669|1753/2223||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000112825.8|Coding|36/42|c.4198_4200delTCTinsGCCGGGGATCTGG|p.(S1400Afs*10)|4592/165656|4198/5610|1400/1870||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000185345.6|Coding|42/48|c.5068_5070delTCTinsGCCGGGGATCTGG|p.(S1690Afs*10)|5068/514183|5068/6480|1690/2160||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000186889.6|Coding|41/47|c.5098_5100delTCTinsGCCGGGGATCTGG|p.(S1700Afs*10)|5098/608992|5098/6510|1700/2170||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000187317.6|Coding|43/49|c.5152_5154delTCTinsGCCGGGGATCTGG|p.(S1718Afs*10)|5152/514183|5152/6564|1718/2188||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000187386.6|Coding|42/48|c.4996_4998delTCTinsGCCGGGGATCTGG|p.(S1666Afs*10)|5401/486209|4996/6408|1666/2136||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000187474.6|Coding|41/47|c.5098_5100delTCTinsGCCGGGGATCTGG|p.(S1700Afs*10)|5254/602741|5098/6510|1700/2170||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000187940.6|Coding|41/47|c.5098_5100delTCTinsGCCGGGGATCTGG|p.(S1700Afs*10)|5285/603337|5098/6510|1700/2170||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000188078.6|Coding|41/47|c.5008_5010delTCTinsGCCGGGGATCTGG|p.(S1670Afs*10)|5008/514183|5008/6420|1670/2140||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000188106.6|Coding|41/47|c.5050_5052delTCTinsGCCGGGGATCTGG|p.(S1684Afs*10)|5050/514084|5050/6462|1684/2154||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000188522.6|Coding|42/48|c.5083_5085delTCTinsGCCGGGGATCTGG|p.(S1695Afs*10)|5681/514927|5083/6495|1695/2165||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000188865.6|Coding|41/47|c.5008_5010delTCTinsGCCGGGGATCTGG|p.(S1670Afs*10)|5008/514183|5008/6420|1670/2140||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000189389.6|Coding|42/48|c.5092_5094delTCTinsGCCGGGGATCTGG|p.(S1698Afs*10)|5092/514183|5092/6504|1698/2168||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000189520.6|Coding|41/47|c.5059_5061delTCTinsGCCGGGGATCTGG|p.(S1687Afs*10)|5059/514183|5059/6471|1687/2157||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000190285.1|Coding|42/48|c.5173_5175delTCTinsGCCGGGGATCTGG|p.(S1725Afs*10)|5173/602340|5173/6585|1725/2195||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000219018.1|Coding|38/44|c.4531_4533delTCTinsGCCGGGGATCTGG|p.(S1511Afs*10)|4531/188006|4531/5943|1511/1981||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000219223.1|Coding|37/43|c.4498_4500delTCTinsGCCGGGGATCTGG|p.(S1500Afs*10)|4498/188006|4498/5910|1500/1970||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000219833.1|Coding|39/45|c.4606_4608delTCTinsGCCGGGGATCTGG|p.(S1536Afs*10)|4606/188006|4606/6018|1536/2006||,CCAGATCCCCGGC|frameshift_elongation&complex_substitution|HIGH|Cacna1c|12288|transcript|ENSMUST00000220022.1|Coding|39/45|c.4780_4782delTCTinsGCCGGGGATCTGG|p.(S1594Afs*10)|4780/188006|4780/6192|1594/2064||,CCAGATCCCCGGC|non_coding_transcript_exon_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188181.6|Noncoding|36/42|n.4592_4594delTCTinsGCCGGGGATCTGG||4592/165656||||;allele_of_genes="MGI:103013";alleles="MGI:5528791";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000072.6:g.118603929_118603931delinsCCAGATCCCCGGC";impact="HIGH";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Cacna1c<sup>tm1.1Wac</sup>";symbol_text="Cacna1c<tm1.1Wac>"
6 118604521 NC_000072.6:g.118604521_118604523delinsCTC GAT CTC . . ANN=CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000075591.12|Coding|40/47|c.4870_4872delATCinsGAG|p.(I1624E)|5084/515248|4870/6420|1624/2140||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000078320.13|Coding|40/47|c.4870_4872delATCinsGAG|p.(I1624E)|5084/515726|4870/6420|1624/2140||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112790.8|Coding|40/47|c.4870_4872delATCinsGAG|p.(I1624E)|5131/515295|4870/6420|1624/2140||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112793.9|Coding|41/48|c.5119_5121delATCinsGAG|p.(I1707E)|5119/514084|5119/6669|1707/2223||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000112825.8|Coding|35/42|c.4060_4062delATCinsGAG|p.(I1354E)|4454/165656|4060/5610|1354/1870||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000185345.6|Coding|41/48|c.4930_4932delATCinsGAG|p.(I1644E)|4930/514183|4930/6480|1644/2160||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000186889.6|Coding|40/47|c.4960_4962delATCinsGAG|p.(I1654E)|4960/608992|4960/6510|1654/2170||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187317.6|Coding|42/49|c.5014_5016delATCinsGAG|p.(I1672E)|5014/514183|5014/6564|1672/2188||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187386.6|Coding|41/48|c.4858_4860delATCinsGAG|p.(I1620E)|5263/486209|4858/6408|1620/2136||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187474.6|Coding|40/47|c.4960_4962delATCinsGAG|p.(I1654E)|5116/602741|4960/6510|1654/2170||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000187940.6|Coding|40/47|c.4960_4962delATCinsGAG|p.(I1654E)|5147/603337|4960/6510|1654/2170||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188078.6|Coding|40/47|c.4870_4872delATCinsGAG|p.(I1624E)|4870/514183|4870/6420|1624/2140||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188106.6|Coding|40/47|c.4912_4914delATCinsGAG|p.(I1638E)|4912/514084|4912/6462|1638/2154||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188522.6|Coding|41/48|c.4945_4947delATCinsGAG|p.(I1649E)|5543/514927|4945/6495|1649/2165||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000188865.6|Coding|40/47|c.4870_4872delATCinsGAG|p.(I1624E)|4870/514183|4870/6420|1624/2140||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000189389.6|Coding|41/48|c.4954_4956delATCinsGAG|p.(I1652E)|4954/514183|4954/6504|1652/2168||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000189520.6|Coding|40/47|c.4921_4923delATCinsGAG|p.(I1641E)|4921/514183|4921/6471|1641/2157||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000190285.1|Coding|41/48|c.5035_5037delATCinsGAG|p.(I1679E)|5035/602340|5035/6585|1679/2195||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219018.1|Coding|37/44|c.4393_4395delATCinsGAG|p.(I1465E)|4393/188006|4393/5943|1465/1981||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219223.1|Coding|36/43|c.4360_4362delATCinsGAG|p.(I1454E)|4360/188006|4360/5910|1454/1970||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000219833.1|Coding|38/45|c.4468_4470delATCinsGAG|p.(I1490E)|4468/188006|4468/6018|1490/2006||,CTC|mnv|HIGH|Cacna1c|12288|transcript|ENSMUST00000220022.1|Coding|38/45|c.4642_4644delATCinsGAG|p.(I1548E)|4642/188006|4642/6192|1548/2064||,CTC|non_coding_transcript_exon_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188181.6|Noncoding|35/42|n.4454_4456delATCinsGAG||4454/165656||||;allele_of_genes="MGI:103013";alleles="MGI:5291981";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.118604521_118604523delinsCTC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Cacna1c<sup>tm4Hfm</sup>";symbol_text="Cacna1c<tm4Hfm>"
6 118742266 NC_000072.6:g.118742266C>T C T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000075591.12|Coding|8/47|c.1216G>A|p.(G406R)|1430/515248|1216/6420|406/2140||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000078320.13|Coding|8/47|c.1216G>A|p.(G406R)|1430/515726|1216/6420|406/2140||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000112790.8|Coding|8/47|c.1216G>A|p.(G406R)|1477/515295|1216/6420|406/2140||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000186889.6|Coding|8/47|c.1306G>A|p.(G436R)|1306/608992|1306/6510|436/2170||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000187474.6|Coding|8/47|c.1306G>A|p.(G436R)|1462/602741|1306/6510|436/2170||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000187940.6|Coding|8/47|c.1306G>A|p.(G436R)|1493/603337|1306/6510|436/2170||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000190285.1|Coding|8/48|c.1306G>A|p.(G436R)|1306/602340|1306/6585|436/2195||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000219018.1|Coding|5/44|c.739G>A|p.(G247R)|739/188006|739/5943|247/1981||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000219223.1|Coding|5/43|c.739G>A|p.(G247R)|739/188006|739/5910|247/1970||,T|missense_variant&splice_region_variant|MODERATE|Cacna1c|12288|transcript|ENSMUST00000219833.1|Coding|5/45|c.739G>A|p.(G247R)|739/188006|739/6018|247/2006||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000112793.9|Coding|7/47|c.1114-292G>A|p.(%3D)|1114/514084|1114/6669|372/2223||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000112825.8|Coding|3/41|c.322-292G>A|p.(%3D)|716/165656|322/5610|108/1870||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000185345.6|Coding|7/47|c.1114-292G>A|p.(%3D)|1114/514183|1114/6480|372/2160||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000187317.6|Coding|7/48|c.1114-292G>A|p.(%3D)|1114/514183|1114/6564|372/2188||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000187386.6|Coding|7/47|c.1027-292G>A|p.(%3D)|1432/486209|1027/6408|343/2136||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188078.6|Coding|7/46|c.1114-292G>A|p.(%3D)|1114/514183|1114/6420|372/2140||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188106.6|Coding|7/46|c.1114-292G>A|p.(%3D)|1114/514084|1114/6462|372/2154||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188522.6|Coding|7/47|c.1114-292G>A|p.(%3D)|1712/514927|1114/6495|372/2165||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188865.6|Coding|7/46|c.1114-292G>A|p.(%3D)|1114/514183|1114/6420|372/2140||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000189389.6|Coding|7/47|c.1114-292G>A|p.(%3D)|1114/514183|1114/6504|372/2168||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000189520.6|Coding|7/46|c.1114-292G>A|p.(%3D)|1114/514183|1114/6471|372/2157||,T|coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000220022.1|Coding|4/44|c.637-292G>A|p.(%3D)|637/188006|637/6192|213/2064||,T|non_coding_transcript_intron_variant|LOW|Cacna1c|12288|transcript|ENSMUST00000188181.6|Noncoding|3/41|n.716-292G>A||716/165656||||;allele_of_genes="MGI:103013";alleles="MGI:5296904";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000072.6:g.118742266C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Cacna1c<sup>tm2Itl</sup>";symbol_text="Cacna1c<tm2Itl>"
6 134920946 NC_000072.6:g.134920946_134920948delinsCGC GAG CGC . . ANN=CGC|mnv|HIGH|Cdkn1b|12576|transcript|ENSMUST00000003115.8|Coding|1/3|c.27_29delGAGinsCGC|p.(S10A)|546/5113|27/594|9/198||,CGC|mnv|HIGH|Cdkn1b|12576|transcript|ENSMUST00000067327.10|Coding|1/2|c.27_29delGAGinsCGC|p.(S10A)|546/5113|27/594|9/198||,CGC|mnv|HIGH|Cdkn1b|12576|transcript|ENSMUST00000204807.1|Coding|2/4|c.27_29delGAGinsCGC|p.(S10A)|103/4808|27/594|9/198||;allele_of_genes="MGI:104565";alleles="MGI:3620550";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.134920946_134920948delinsCGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Cdkn1b<sup>tm2Kin</sup>";symbol_text="Cdkn1b<tm2Kin>"
6 134922039 NC_000072.6:g.134922039A>G A G . . ANN=G|missense_variant|MODERATE|Cdkn1b|12576|transcript|ENSMUST00000003115.8|Coding|2/3|c.559A>G|p.(T187A)|1078/5113|559/594|187/198||,G|missense_variant|MODERATE|Cdkn1b|12576|transcript|ENSMUST00000067327.10|Coding|2/2|c.559A>G|p.(T187A)|1078/5113|559/594|187/198||,G|missense_variant|MODERATE|Cdkn1b|12576|transcript|ENSMUST00000204807.1|Coding|3/4|c.559A>G|p.(T187A)|635/4808|559/594|187/198||;allele_of_genes="MGI:104565";alleles="MGI:2387694";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.134922039A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Cdkn1b<sup>tm1Jro</sup>";symbol_text="Cdkn1b<tm1Jro>"
6 140041807 NC_000072.6:g.140041807T>A T A . . ANN=A|missense_variant|MODERATE|Capza3|12344|transcript|ENSMUST00000043797.5|Coding|1/1|c.131T>A|p.(M44K)|251/1222|131/900|44/300||,A|non_coding_transcript_exon_variant|LOW|Capza3|.|transcript|ENSMUST00000204342.1|Noncoding|1/2|n.556T>A||556/907||||;allele_of_genes="MGI:106221";alleles="MGI:3590195";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000072.6:g.140041807T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Capza3<sup>repro32</sup>";symbol_text="Capza3<repro32>"
6 149054933 NC_000072.6:g.149054935_149054954del TCCTTCTTTTGACTGAAGACC T . . ANN=T|frameshift_truncation|HIGH|Dennd5b|320560|transcript|ENSMUST00000111557.7|Coding|4/21|c.1039_1058del|p.(G347Nfs*2)|1410/113610|1039/3825|347/1275||,T|non_coding_transcript_exon_variant|LOW|Dennd5b|320560|transcript|ENSMUST00000150436.1|Noncoding|4/14|n.1268_1287del||1268/87551||||;allele_of_genes="MGI:2444273";alleles="MGI:6317361";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000072.6:g.149054935_149054954del";impact="HIGH";soTerm="deletion";strain_id="MGI:5649830";strain_name="(C57BL/6_x_CBA)F1";symbol="Dennd5b<sup>em1Smgo</sup>";symbol_text="Dennd5b<em1Smgo>"
7 4527173 NC_000073.6:g.4527173C>T C T . . ANN=T|missense_variant|MODERATE|Dnaaf3|436022|transcript|ENSMUST00000094897.4|Coding|7/12|c.710G>A|p.(G237D)|790/9521|710/1761|237/587||,T|non_coding_transcript_intron_variant|LOW|Gm15873|.|transcript|ENSMUST00000123390.1|Noncoding|1/1|n.471+167C>T||472/1649||||,T|non_coding_transcript_intron_variant|LOW|Gm15873|.|transcript|ENSMUST00000205662.1|Noncoding|1/1|n.373+167C>T||374/3942||||;allele_of_genes="MGI:3588207";alleles="MGI:5442117";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.4527173C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnaaf3<sup>b2b1739Clo</sup>";symbol_text="Dnaaf3<b2b1739Clo>"
7 13029396 NC_000073.6:g.13029396T>C T C . . ANN=C|missense_variant|MODERATE|Trim28|21849|transcript|ENSMUST00000005705.7|Coding|12/17|c.1463T>C|p.(V488A)|2030/6884|1463/2505|488/835||,C|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000125136.2|Noncoding|1/3|n.306T>C||306/1013||||,C|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000128951.8|Noncoding|6/6|n.801T>C||801/1658||||,C|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000149061.2|Noncoding|4/5|n.333T>C||333/1155||||;allele_of_genes="MGI:109274";alleles="MGI:4948085";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.13029396T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Trim28<sup>tm1Fca</sup>";symbol_text="Trim28<tm1Fca>"
7 13029401 NC_000073.6:g.13029401_13029402delinsGC CT GC . . ANN=GC|mnv|HIGH|Trim28|21849|transcript|ENSMUST00000005705.7|Coding|12/17|c.1468_1469delCTinsGC|p.(L490A)|2035/6884|1468/2505|490/835||,GC|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000125136.2|Noncoding|1/3|n.311_312delCTinsGC||311/1013||||,GC|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000128951.8|Noncoding|6/6|n.806_807delCTinsGC||806/1658||||,GC|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000149061.2|Noncoding|4/5|n.338_339delCTinsGC||338/1155||||;allele_of_genes="MGI:109274";alleles="MGI:4948085";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.13029401_13029402delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Trim28<sup>tm1Fca</sup>";symbol_text="Trim28<tm1Fca>"
7 13030321 NC_000073.6:g.13030321_13030322delinsGA CC GA . . ANN=GA|mnv|HIGH|Trim28|21849|transcript|ENSMUST00000005705.7|Coding|15/17|c.2139_2140delCCinsGA|p.(C713_H714delinsWN)|2706/6884|2139/2505|713/835||,GA|non_coding_transcript_exon_variant|LOW|Trim28|21849|transcript|ENSMUST00000129122.1|Noncoding|2/2|n.536_537delCCinsGA||536/644||||;allele_of_genes="MGI:109274";alleles="MGI:5620610";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.13030321_13030322delinsGA";impact="MODERATE";soTerm="MNV";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trim28<sup>chatwo</sup>";symbol_text="Trim28<chatwo>"
7 13301414 NC_000073.6:g.13301414A>T A T . . ANN=T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000098814.10|Coding|19/29|c.1798A>T|p.(I600F)|1941/32600|1798/2799|600/933||,T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000165964.7|Coding|19/29|c.1798A>T|p.(I600F)|2016/32161|1798/2799|600/933||,T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000177588.7|Coding|19/29|c.1798A>T|p.(I600F)|2024/34113|1798/2799|600/933||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000123846.8|Noncoding|19/28|n.2016A>T||2016/32169||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000147735.8|Noncoding|18/27|n.1809A>T||1809/31288||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000148471.8|Noncoding|19/28|n.2054A>T||2054/34143||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000156525.8|Noncoding|19/28|n.1902A>T||1902/32562||||;allele_of_genes="MGI:101789";alleles="MGI:5510743";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.13301414A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Lig1<sup>m1Anu</sup>";symbol_text="Lig1<m1Anu>"
7 13307597 NC_000073.6:g.13307597C>T C T . . ANN=T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000098814.10|Coding|25/29|c.2353C>T|p.(R785W)|2496/32600|2353/2799|785/933||,T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000165964.7|Coding|25/29|c.2353C>T|p.(R785W)|2571/32161|2353/2799|785/933||,T|missense_variant|MODERATE|Lig1|16881|transcript|ENSMUST00000177588.7|Coding|25/29|c.2353C>T|p.(R785W)|2579/34113|2353/2799|785/933||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000123846.8|Noncoding|24/28|n.2572C>T||2572/32169||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000131294.2|Noncoding|1/5|n.411C>T||411/4179||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000147735.8|Noncoding|23/27|n.2365C>T||2365/31288||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000148471.8|Noncoding|24/28|n.2610C>T||2610/34143||||,T|non_coding_transcript_exon_variant|LOW|Lig1|16881|transcript|ENSMUST00000156525.8|Noncoding|24/28|n.2458C>T||2458/32562||||;allele_of_genes="MGI:101789";alleles="MGI:2183413";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.13307597C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3706233";strain_name="129P2/OlaHsd-Hprt<b-m3>";symbol="Lig1<sup>tm3Dwm</sup>";symbol_text="Lig1<tm3Dwm>"
7 16112603 NC_000073.6:g.16112603G>A G A . . ANN=A|missense_variant|MODERATE|Napa|108124|transcript|ENSMUST00000006181.6|Coding|4/11|c.315G>A|p.(M105I)|534/19518|315/888|105/296||,A|3_prime_UTR_exon_variant|LOW|Napa|108124|transcript|ENSMUST00000127637.7|Coding|3/6|c.*28G>A|p.(%3D)|304/14928|208/207|70/69||,A|non_coding_transcript_exon_variant|LOW|Napa|108124|transcript|ENSMUST00000124563.7|Noncoding|4/4|n.360G>A||360/14503||||,A|non_coding_transcript_intron_variant|LOW|Napa|108124|transcript|ENSMUST00000139507.2|Noncoding|2/4|n.135-747G>A||135/7600||||;allele_of_genes="MGI:104563";alleles="MGI:1856610";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.16112603G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159754";strain_name="C57BL/10J";symbol="Napa<sup>hyh</sup>";symbol_text="Napa<hyh>"
7 24899175 NC_000073.6:g.24899175T>A T A . . ANN=A|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|2/5|c.148T>A|p.(C50S)|289/4817|148/663|50/221||;allele_of_genes="MGI:101774";alleles="MGI:5056357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24899175T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cd79a<sup>m1Btlr</sup>";symbol_text="Cd79a<m1Btlr>"
7 24899213 NC_000073.6:g.24899213G>A G A . . ANN=A|stop_gained|HIGH|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|2/5|c.186G>A|p.(W62*)|327/4817|186/663|62/221||;allele_of_genes="MGI:101774";alleles="MGI:5006856";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.24899213G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4818406";strain_name="C57BL/6JSfdAnu";symbol="Cd79a<sup>m1Anu</sup>";symbol_text="Cd79a<m1Anu>"
7 24899262 NC_000073.6:g.24899262G>T G T . . ANN=T|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|2/5|c.235G>T|p.(G79C)|376/4817|235/663|79/221||;allele_of_genes="MGI:101774";alleles="MGI:6113480";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24899262G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cd79a<sup>m2Btlr</sup>";symbol_text="Cd79a<m2Btlr>"
7 24901297 NC_000073.6:g.24901297A>T A T . . ANN=T|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|4/5|c.545A>T|p.(Y182F)|686/4817|545/663|182/221||;allele_of_genes="MGI:101774";alleles="MGI:2388326";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24901297A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cd79a<sup>tm1.1Cgn</sup>";symbol_text="Cd79a<tm1.1Cgn>"
7 24901452 NC_000073.6:g.24901452T>G T G . . ANN=G|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|5/5|c.571T>G|p.(S191A)|712/4817|571/663|191/221||;allele_of_genes="MGI:101774";alleles="MGI:5301876";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24901452T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Cd79a<sup>tm1.1Rsky</sup>";symbol_text="Cd79a<tm1.1Rsky>"
7 24901459 NC_000073.6:g.24901459A>T A T . . ANN=T|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|5/5|c.578A>T|p.(Y193F)|719/4817|578/663|193/221||;allele_of_genes="MGI:101774";alleles="MGI:2388326";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24901459A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cd79a<sup>tm1.1Cgn</sup>";symbol_text="Cd79a<tm1.1Cgn>"
7 24901470 NC_000073.6:g.24901470T>G T G . . ANN=G|missense_variant|MODERATE|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|5/5|c.589T>G|p.(S197A)|730/4817|589/663|197/221||;allele_of_genes="MGI:101774";alleles="MGI:5301876";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24901470T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Cd79a<sup>tm1.1Rsky</sup>";symbol_text="Cd79a<tm1.1Rsky>"
7 24901488 NC_000073.6:g.24901488_24901489delinsGT AC GT . . ANN=GT|mnv|HIGH|Cd79a|12518|transcript|ENSMUST00000003469.7|Coding|5/5|c.607_608delACinsGT|p.(T203V)|748/4817|607/663|203/221||;allele_of_genes="MGI:101774";alleles="MGI:5301876";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.24901488_24901489delinsGT";impact="MODERATE";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Cd79a<sup>tm1.1Rsky</sup>";symbol_text="Cd79a<tm1.1Rsky>"
7 25307115 NC_000073.6:g.25307115T>A T A . . ANN=A|stop_gained|HIGH|Tmem145|330485|transcript|ENSMUST00000108409.1|Coding|2/15|c.147T>A|p.(C49*)|203/10088|147/1692|49/564||,A|stop_gained|HIGH|Tmem145|330485|transcript|ENSMUST00000119703.7|Coding|2/15|c.147T>A|p.(C49*)|203/10075|147/1482|49/494||,A|non_coding_transcript_exon_variant|LOW|Tmem145|330485|transcript|ENSMUST00000140016.1|Noncoding|2/9|n.205T>A||205/2721||||;allele_of_genes="MGI:3607779";alleles="MGI:5792097";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.25307115T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmem145<sup>mpc269H</sup>";symbol_text="Tmem145<mpc269H>"
7 25327560 NC_000073.6:g.25327560A>G A G . . ANN=G|missense_variant|MODERATE|Megf8|269878|transcript|ENSMUST00000128119.1|Coding|3/41|c.442A>G|p.(N148D)|785/48754|442/8370|148/2790||;allele_of_genes="MGI:2446294";alleles="MGI:5437080";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.25327560A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Megf8<sup>b2b1702.2Clo</sup>";symbol_text="Megf8<b2b1702.2Clo>"
7 25342303 NC_000073.6:g.25342303A>T A T . . ANN=T|missense_variant|MODERATE|Megf8|269878|transcript|ENSMUST00000128119.1|Coding|21/41|c.3641A>T|p.(N1214I)|3984/48754|3641/8370|1214/2790||;allele_of_genes="MGI:2446294";alleles="MGI:5311364";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.25342303A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Megf8<sup>b2b288Clo</sup>";symbol_text="Megf8<b2b288Clo>"
7 28294786 NC_000073.6:g.28294786C>A C A . . ANN=A|missense_variant|MODERATE|Dll3|13389|transcript|ENSMUST00000108315.3|Coding|7/9|c.1225G>T|p.(G409C)|1717/8686|1225/1758|409/586||;allele_of_genes="MGI:1096877";alleles="MGI:3045636";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.28294786C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3045688";strain_name="STOCK_Dll3<oma>";symbol="Dll3<sup>oma</sup>";symbol_text="Dll3<oma>"
7 30251410 NC_000073.6:g.30251410A>T A T . . ANN=T|missense_variant|MODERATE|Wdr62|233064|transcript|ENSMUST00000108190.7|Coding|18/33|c.2195T>A|p.(I732N)|2279/40282|2195/4575|732/1525||,T|missense_variant|MODERATE|Wdr62|233064|transcript|ENSMUST00000134570.7|Coding|9/23|c.857T>A|p.(I286N)|857/22510|857/3162|286/1054||,T|missense_variant|MODERATE|Wdr62|233064|transcript|ENSMUST00000145027.7|Coding|18/33|c.2195T>A|p.(I732N)|2256/40259|2195/3231|732/1077||,T|non_coding_transcript_exon_variant|LOW|Wdr62|233064|transcript|ENSMUST00000132483.1|Noncoding|2/6|n.389T>A||389/6444||||;allele_of_genes="MGI:1923696";alleles="MGI:5437081";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.30251410A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Wdr62<sup>b2b1508Clo</sup>";symbol_text="Wdr62<b2b1508Clo>"
7 30569361 NC_000073.6:g.30569361A>T A T . . ANN=T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000006470.13|Coding|37/37|c.7966T>A|p.(F2656I)|7966/19860|7966/8166|2656/2722||,T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000108154.8|Coding|37/37|c.7942T>A|p.(F2648I)|7951/19869|7942/8142|2648/2714||,T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000131002.1|Coding|35/35|c.5844T>A|p.(D1948E)|5844/16481|5844/6044|1948/2014||;allele_of_genes="MGI:109565";alleles="MGI:5532298";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.30569361A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161072";strain_name="BALB/c";symbol="Kmt2b<sup>m1H</sup>";symbol_text="Kmt2b<m1H>"
7 30569420 NC_000073.6:g.30569420A>T A T . . ANN=T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000006470.13|Coding|37/37|c.7907T>A|p.(M2636K)|7907/19860|7907/8166|2636/2722||,T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000108154.8|Coding|37/37|c.7883T>A|p.(M2628K)|7892/19869|7883/8142|2628/2714||,T|missense_variant|MODERATE|Kmt2b|75410|transcript|ENSMUST00000131002.1|Coding|35/35|c.5785T>A|p.(C1929S)|5785/16481|5785/6044|1929/2014||;allele_of_genes="MGI:109565";alleles="MGI:5532297";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.30569420A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161072";strain_name="BALB/c";symbol="Kmt2b<sup>Gena263</sup>";symbol_text="Kmt2b<Gena263>"
7 30911488 NC_000073.6:g.30911488C>A C A . . ANN=A|stop_gained|HIGH|Mag|17136|transcript|ENSMUST00000040548.13|Coding|4/12|c.328G>T|p.(E110*)|470/15145|328/1749|110/583||,A|stop_gained|HIGH|Mag|17136|transcript|ENSMUST00000187137.6|Coding|5/13|c.328G>T|p.(E110*)|478/15657|328/1749|110/583||,A|stop_gained|HIGH|Mag|17136|transcript|ENSMUST00000188569.6|Coding|4/12|c.328G>T|p.(E110*)|451/14723|328/1703|110/567||,A|stop_gained|HIGH|Mag|17136|transcript|ENSMUST00000190638.6|Coding|4/5|c.328G>T|p.(E110*)|458/5683|328/505|110/168||,A|stop_gained|HIGH|Mag|17136|transcript|ENSMUST00000191081.6|Coding|4/11|c.328G>T|p.(E110*)|451/14778|328/1884|110/628||,A|non_coding_transcript_exon_variant|LOW|Mag|17136|transcript|ENSMUST00000186422.6|Noncoding|3/4|n.587G>T||587/7337||||;allele_of_genes="MGI:96912";alleles="MGI:5792042";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.30911488C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mag<sup>mpc225H</sup>";symbol_text="Mag<mpc225H>"
7 43430634 NC_000073.6:g.43430634G>T G T . . ANN=T|missense_variant|MODERATE|Lim2|233187|transcript|ENSMUST00000004732.6|Coding|2/5|c.44G>T|p.(G15V)|119/5909|44/522|15/174||,T|non_coding_transcript_exon_variant|LOW|Lim2|233187|transcript|ENSMUST00000177375.1|Noncoding|4/6|n.1213G>T||1213/8322||||;allele_of_genes="MGI:104698";alleles="MGI:1862040";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.43430634G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653975";strain_name="(102/El_x_C3H/HeEl)F1";symbol="Lim2<sup>To3</sup>";symbol_text="Lim2<To3>"
7 43430741 NC_000073.6:g.43430741T>C T C . . ANN=C|missense_variant|MODERATE|Lim2|233187|transcript|ENSMUST00000004732.6|Coding|2/5|c.151T>C|p.(C51R)|226/5909|151/522|51/174||,C|non_coding_transcript_exon_variant|LOW|Lim2|233187|transcript|ENSMUST00000177375.1|Noncoding|4/6|n.1320T>C||1320/8322||||;allele_of_genes="MGI:104698";alleles="MGI:5304394";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.43430741T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lim2<sup>Aca47</sup>";symbol_text="Lim2<Aca47>"
7 44897331 NC_000073.6:g.44897331T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000071207.13|Coding|4/10|c.387+2T>A|p.?|561/4546|388/1248|130/416||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000207069.1|Coding|2/2|c.180+2T>A|p.?|337/1451|181/207|61/69||,A|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000207154.1|Coding|4/5|c.*154+2T>A|p.(%3D)|546/2494|286/285|96/95||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000207480.1|Noncoding|4/7|n.546+2T>A||547/4532||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000207485.1|Coding|3/9|c.279+2T>A|p.?|280/4096|280/1140|94/380||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000207939.2|Coding|3/5|c.258+2T>A|p.?|266/2538|259/575|87/191||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000208179.1|Coding|4/11|c.387+2T>A|p.?|388/4163|388/1164|130/388||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000208291.1|Noncoding|4/10|n.553+2T>A||554/6546||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000208600.1|Coding|4/7|c.387+2T>A|p.?|555/3379|388/579|130/193||,A|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000208908.1|Coding|3/6|c.*41+2T>A|p.(%3D)|275/2758|234/233|78/77||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000209039.1|Coding|4/9|c.387+2T>A|p.?|534/4499|388/1050|130/350||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Fuz|70300|transcript|ENSMUST00000209132.1|Coding|4/4|c.387+2T>A|p.?|547/1734|388/510|130/170||,A|missense_variant|MODERATE|Fuz|70300|transcript|ENSMUST00000209163.1|Coding|1/3|c.35T>A|p.(V12E)|35/1377|35/324|12/108||,A|non_coding_transcript_exon_variant|LOW|D7Bwg0826e|.|transcript|ENSMUST00000208484.1|Noncoding|1/1|n.769A>T||769/3795||||;allele_of_genes="MGI:1917550";alleles="MGI:5311392";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.44897331T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Fuz<sup>b2b1273Clo</sup>";symbol_text="Fuz<b2b1273Clo>"
7 45431318 NC_000073.6:g.45431318A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ruvbl2|20174|transcript|ENSMUST00000107771.11|Coding|2/14|c.67+2T>A|p.?|428/12726|68/1392|23/464||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ruvbl2|20174|transcript|ENSMUST00000210439.1|Coding|2/8|c.67+2T>A|p.?|82/9580|68/711|23/237||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ruvbl2|20174|transcript|ENSMUST00000211214.1|Coding|5/17|c.67+2T>A|p.?|768/16337|68/1392|23/464||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ruvbl2|20174|transcript|ENSMUST00000211440.1|Coding|1/5|c.54+2T>A|p.?|55/6425|55/404|19/134||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ruvbl2|20174|transcript|ENSMUST00000211666.1|Coding|3/8|c.67+2T>A|p.?|251/9759|68/663|23/221||;allele_of_genes="MGI:1342299";alleles="MGI:5428996";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.45431318A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ruvbl2<sup>M1Btlr</sup>";symbol_text="Ruvbl2<M1Btlr>"
7 45874129 NC_000073.6:g.45874130_45874134del CCGGGT C . . ANN=C|frameshift_truncation|HIGH|Kdelr1|68137|transcript|ENSMUST00000002855.13|Coding|3/5|c.280_284del|p.(R94Gfs*17)|519/10961|280/639|94/213||,C|frameshift_truncation|HIGH|Kdelr1|68137|transcript|ENSMUST00000211234.1|Coding|3/5|c.94_98del|p.(R32Gfs*17)|237/10121|94/453|32/151||,C|frameshift_truncation|HIGH|Kdelr1|68137|transcript|ENSMUST00000211716.1|Coding|3/5|c.280_284del|p.(R94Gfs*17)|466/10905|280/417|94/139||,C|5_prime_UTR_intron_variant|LOW|Grin2d|.|transcript|ENSMUST00000211250.1|Coding|1/3|c.-728-2935_-728-2931del|p.(%3D)|91/12002|1/191|1/63||,C|non_coding_transcript_exon_variant|LOW|Kdelr1|68137|transcript|ENSMUST00000211152.1|Noncoding|3/3|n.404_408del||404/1479||||;allele_of_genes="MGI:1915387,MGI:1915387";alleles="MGI:5689886,MGI:5689886";geneLevelConsequence="frameshift_variant,intron_variant";hgvs_nomenclature="NC_000073.6:g.45874130_45874134del";impact="HIGH,MODIFIER";soTerm="deletion";strain_id="MGI:3055581";strain_name="C57BL/6JJcl";symbol="Kdelr1<sup>em1Btlr</sup>";symbol_text="Kdelr1<em1Btlr>"
7 45881621 NC_000073.6:g.45881621A>G A G . . ANN=G|missense_variant|MODERATE|Kdelr1|68137|transcript|ENSMUST00000002855.13|Coding|4/5|c.473A>G|p.(Y158C)|712/10961|473/639|158/213||,G|missense_variant|MODERATE|Kdelr1|68137|transcript|ENSMUST00000211234.1|Coding|4/5|c.287A>G|p.(Y96C)|430/10121|287/453|96/151||,G|coding_transcript_intron_variant|LOW|Kdelr1|68137|transcript|ENSMUST00000211716.1|Coding|4/4|c.411+62A>G|p.(%3D)|598/10905|412/417|138/139||,G|non_coding_transcript_exon_variant|LOW|Kdelr1|68137|transcript|ENSMUST00000211495.1|Noncoding|1/2|n.185A>G||185/1917||||;allele_of_genes="MGI:1915387";alleles="MGI:4843278";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.45881621A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kdelr1<sup>m1Btlr</sup>";symbol_text="Kdelr1<m1Btlr>"
7 46099862 NC_000073.6:g.46099862A>T A T . . ANN=T|stop_gained|HIGH|Kcnj11|16514|transcript|ENSMUST00000209881.1|Coding|1/2|c.36T>A|p.(Y12*)|42/605|36/428|12/142||,T|stop_gained|HIGH|Kcnj11|16514|transcript|ENSMUST00000211674.1|Coding|1/1|c.36T>A|p.(Y12*)|376/3142|36/1173|12/391||,T|5_prime_UTR_exon_variant|LOW|Kcnj11|16514|transcript|ENSMUST00000209291.1|Coding|2/2|c.-193T>A|p.(%3D)|52/1239|1/250|1/83||,T|5_prime_UTR_intron_variant|LOW|Kcnj11|16514|transcript|ENSMUST00000180081.2|Coding|1/1|c.-16-210T>A|p.(%3D)|138/1892|1/764|1/254||;allele_of_genes="MGI:107501";alleles="MGI:3056474";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.46099862A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5655836";strain_name="(C3H/HeH_x_BALB/c)F1";symbol="Kcnj11<sup>Y12stop</sup>";symbol_text="Kcnj11<Y12stop>"
7 46769351 NC_000073.6:g.46769351G>A G A . . ANN=A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000014562.13|Coding|17/23|c.2494C>T|p.(Q832*)|3142/35562|2494/3381|832/1127||,A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000107653.7|Coding|17/23|c.2395C>T|p.(Q799*)|2897/35410|2395/3282|799/1094||,A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000107654.7|Coding|17/23|c.2494C>T|p.(Q832*)|2611/35534|2494/3381|832/1127||,A|synonymous_variant|LOW|Hps5|246694|transcript|ENSMUST00000130365.1|Coding|2/5|c.444C>T|p.(%3D)|444/7086|444/760|148/253||,A|synonymous_variant|LOW|Hps5|246694|transcript|ENSMUST00000153789.7|Coding|4/8|c.891C>T|p.(%3D)|891/11973|891/1602|297/534||,A|3_prime_UTR_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000142663.7|Coding|18/24|c.*1044C>T|p.(%3D)|2924/35213|1582/1581|528/527||,A|3_prime_UTR_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000211347.1|Coding|17/23|c.*1875C>T|p.(%3D)|2919/35339|616/615|206/205||,A|non_coding_transcript_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000145776.7|Noncoding|16/22|n.3620C>T||3620/34700||||;allele_of_genes="MGI:2180307";alleles="MGI:6114045";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.46769351G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps5<sup>ru2-4Btlr</sup>";symbol_text="Hps5<ru2-4Btlr>"
7 46772000 NC_000073.6:g.46772000T>A T A . . ANN=A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000014562.13|Coding|16/23|c.2038A>T|p.(R680*)|2686/35562|2038/3381|680/1127||,A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000107653.7|Coding|16/23|c.1939A>T|p.(R647*)|2441/35410|1939/3282|647/1094||,A|stop_gained|HIGH|Hps5|246694|transcript|ENSMUST00000107654.7|Coding|16/23|c.2038A>T|p.(R680*)|2155/35534|2038/3381|680/1127||,A|missense_variant|MODERATE|Hps5|246694|transcript|ENSMUST00000153789.7|Coding|3/8|c.435A>T|p.(R145S)|435/11973|435/1602|145/534||,A|3_prime_UTR_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000142663.7|Coding|17/24|c.*588A>T|p.(%3D)|2468/35213|1582/1581|528/527||,A|3_prime_UTR_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000211347.1|Coding|16/23|c.*1419A>T|p.(%3D)|2463/35339|616/615|206/205||,A|non_coding_transcript_exon_variant|LOW|Hps5|246694|transcript|ENSMUST00000145776.7|Noncoding|15/22|n.3164A>T||3164/34700||||;allele_of_genes="MGI:2180307";alleles="MGI:3794862";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.46772000T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps5<sup>ru2-2Btlr</sup>";symbol_text="Hps5<ru2-2Btlr>"
7 46779070 NC_000073.6:g.46779070A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000014562.13|Coding|9/22|c.985+2T>C|p.?|1634/35562|986/3381|329/1127||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000107653.7|Coding|9/22|c.985+2T>C|p.?|1488/35410|986/3282|329/1094||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000107654.7|Coding|9/22|c.985+2T>C|p.?|1103/35534|986/3381|329/1127||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000142663.7|Coding|9/23|c.985+2T>C|p.?|1285/35213|986/1581|329/527||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000145776.7|Noncoding|9/21|n.1284+2T>C||1285/34700||||,G|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000211347.1|Coding|9/22|c.*404+2T>C|p.(%3D)|1449/35339|616/615|206/205||;allele_of_genes="MGI:2180307";alleles="MGI:3778297";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.46779070A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps5<sup>ru2-Btlr</sup>";symbol_text="Hps5<ru2-Btlr>"
7 46783469 NC_000073.6:g.46783469A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000014562.13|Coding|7/22|c.824+2T>C|p.?|1473/35562|825/3381|275/1127||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000107653.7|Coding|7/22|c.824+2T>C|p.?|1327/35410|825/3282|275/1094||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000107654.7|Coding|7/22|c.824+2T>C|p.?|942/35534|825/3381|275/1127||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000142663.7|Coding|7/23|c.824+2T>C|p.?|1124/35213|825/1581|275/527||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000145776.7|Noncoding|7/21|n.1123+2T>C||1124/34700||||,G|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Hps5|246694|transcript|ENSMUST00000211347.1|Coding|7/22|c.*243+2T>C|p.(%3D)|1288/35339|616/615|206/205||;allele_of_genes="MGI:2180307";alleles="MGI:5607739";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.46783469A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps5<sup>ru2-3Btlr</sup>";symbol_text="Hps5<ru2-3Btlr>"
7 49917609 NC_000073.6:g.49917609G>A G A . . ANN=A|missense_variant|MODERATE|Slc6a5|104245|transcript|ENSMUST00000056442.11|Coding|5/16|c.810G>A|p.(M270I)|1067/53711|810/2376|270/792||,A|missense_variant|MODERATE|Slc6a5|104245|transcript|ENSMUST00000107605.2|Coding|4/15|c.810G>A|p.(M270I)|832/47794|810/2376|270/792||,A|missense_variant|MODERATE|Slc6a5|104245|transcript|ENSMUST00000207753.1|Coding|5/16|c.810G>A|p.(M270I)|968/53088|810/2376|270/792||,A|3_prime_UTR_exon_variant|LOW|Slc6a5|104245|transcript|ENSMUST00000209172.1|Coding|4/15|c.*125G>A|p.(%3D)|775/49194|547/546|183/182||;allele_of_genes="MGI:105090";alleles="MGI:5796925";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.49917609G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc6a5<sup>trsl</sup>";symbol_text="Slc6a5<trsl>"
7 56226893 NC_000073.6:g.56226893T>A T A . . ANN=A|stop_gained|HIGH|Herc2|15204|transcript|ENSMUST00000076226.12|Coding|88/93|c.13476T>A|p.(C4492*)|13547/181548|13476/14511|4492/4837||,A|stop_gained|HIGH|Herc2|15204|transcript|ENSMUST00000164095.2|Coding|88/93|c.13476T>A|p.(C4492*)|13595/181375|13476/14511|4492/4837||,A|stop_gained|HIGH|Herc2|15204|transcript|ENSMUST00000205303.1|Coding|86/91|c.13368T>A|p.(C4456*)|13368/180256|13368/14403|4456/4801||,A|coding_transcript_intron_variant|LOW|Herc2|15204|transcript|ENSMUST00000205678.1|Coding|2/2|c.259+3900T>A|p.(%3D)|260/10602|260/501|87/167||;allele_of_genes="MGI:103234";alleles="MGI:5792014";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.56226893T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Herc2<sup>mpc178H</sup>";symbol_text="Herc2<mpc178H>"
7 56293864 NC_000073.6:g.56293864C>T C T . . ANN=T|stop_gained|HIGH|Oca2|18431|transcript|ENSMUST00000032633.11|Coding|7/24|c.784C>T|p.(R262*)|925/296759|784/2502|262/834||,T|stop_gained|HIGH|Oca2|18431|transcript|ENSMUST00000152693.7|Coding|7/23|c.784C>T|p.(R262*)|908/296489|784/924|262/308||,T|3_prime_UTR_exon_variant|LOW|Oca2|18431|transcript|ENSMUST00000144739.7|Coding|8/25|c.*668C>T|p.(%3D)|1172/296706|412/411|138/137||;allele_of_genes="MGI:97454";alleles="MGI:1856114";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.56293864C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5651319";strain_name="Asiatic_fancy_mice";symbol="Oca2<sup>p</sup>";symbol_text="Oca2<p>"
7 79089877 NC_000073.6:g.79089877T>A T A . . ANN=A|stop_gained|HIGH|Acan|11595|transcript|ENSMUST00000032835.6|Coding|6/17|c.1032T>A|p.(Y344*)|1165/61617|1032/6399|344/2133||;allele_of_genes="MGI:99602";alleles="MGI:5297419";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.79089877T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Acan<sup>b2b183Clo</sup>";symbol_text="Acan<b2b183Clo>"
7 79111378 NC_000073.6:g.79111378C>T C T . . ANN=T|missense_variant|MODERATE|Acan|11595|transcript|ENSMUST00000032835.6|Coding|13/17|c.5837C>T|p.(A1946V)|5970/61617|5837/6399|1946/2133||,T|synonymous_variant|LOW|Acan|11595|transcript|ENSMUST00000206779.1|Coding|3/7|c.1683C>T|p.(%3D)|1683/14877|1683/2245|561/748||;allele_of_genes="MGI:99602";alleles="MGI:5792073";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.79111378C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Acan<sup>mpc227H</sup>";symbol_text="Acan<mpc227H>"
7 79711069 NC_000073.6:g.79711069A>T A T . . ANN=T|missense_variant|MODERATE|Kif7|16576|transcript|ENSMUST00000059836.12|Coding|3/18|c.557T>A|p.(V186E)|585/16088|557/4044|186/1348||,T|missense_variant|MODERATE|Kif7|16576|transcript|ENSMUST00000178048.7|Coding|3/18|c.557T>A|p.(V186E)|585/16088|557/4047|186/1349||,T|missense_variant|MODERATE|Kif7|16576|transcript|ENSMUST00000183846.7|Coding|4/19|c.557T>A|p.(V186E)|637/17623|557/4047|186/1349||,T|missense_variant|MODERATE|Kif7|16576|transcript|ENSMUST00000184137.1|Coding|4/19|c.557T>A|p.(V186E)|586/17142|557/4044|186/1348||,T|non_coding_transcript_exon_variant|LOW|9330171B17Rik|.|transcript|ENSMUST00000035939.7|Noncoding|1/1|n.787A>T||787/2073||||,T|non_coding_transcript_exon_variant|LOW|9330171B17Rik|.|transcript|ENSMUST00000197011.1|Noncoding|1/1|n.699A>T||699/1987||||;allele_of_genes="MGI:1098239";alleles="MGI:5498230";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.79711069A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kif7<sup>b2b2254Clo</sup>";symbol_text="Kif7<b2b2254Clo>"
7 82763352 NC_000073.6:g.82763352A>G A G . . ANN=G|missense_variant|MODERATE|Efl1|101592|transcript|ENSMUST00000039881.3|Coding|18/20|c.2948A>G|p.(K983R)|3001/129212|2948/3384|983/1128||,G|missense_variant|MODERATE|Efl1|101592|transcript|ENSMUST00000179489.7|Coding|18/20|c.2948A>G|p.(K983R)|2999/129239|2948/3384|983/1128||;allele_of_genes="MGI:2141969";alleles="MGI:5792012";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.82763352A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Efl1<sup>mpc102H</sup>";symbol_text="Efl1<mpc102H>"
7 88450541 NC_000073.6:g.88450541T>A T A . . ANN=A|missense_variant|MODERATE|Rab38|72433|transcript|ENSMUST00000107256.3|Coding|2/3|c.263T>A|p.(I88N)|392/61300|263/636|88/212||,A|missense_variant|MODERATE|Rab38|72433|transcript|ENSMUST00000208478.1|Coding|2/3|c.263T>A|p.(I88N)|271/60436|263/366|88/122||;allele_of_genes="MGI:1919683";alleles="MGI:5497994";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.88450541T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rab38<sup>m1Btlr</sup>";symbol_text="Rab38<m1Btlr>"
7 98052207 NC_000073.6:g.98052207A>T A T . . ANN=T|stop_gained|HIGH|Myo7a|17921|transcript|ENSMUST00000084979.10|Coding|47/48|c.6399T>A|p.(C2133*)|6521/57848|6399/6501|2133/2167||,T|stop_gained|HIGH|Myo7a|17921|transcript|ENSMUST00000107122.7|Coding|48/49|c.6417T>A|p.(C2139*)|6539/57848|6417/6519|2139/2173||,T|stop_gained|HIGH|Myo7a|17921|transcript|ENSMUST00000107127.7|Coding|48/49|c.6432T>A|p.(C2144*)|6702/67879|6432/6534|2144/2178||,T|stop_gained|HIGH|Myo7a|17921|transcript|ENSMUST00000107128.7|Coding|48/49|c.6546T>A|p.(C2182*)|6837/68465|6546/6648|2182/2216||,T|stop_gained|HIGH|Myo7a|17921|transcript|ENSMUST00000205746.1|Coding|46/47|c.6393T>A|p.(C2131*)|6450/55658|6393/6495|2131/2165||,T|3_prime_UTR_exon_variant|LOW|Myo7a|17921|transcript|ENSMUST00000156992.7|Coding|17/18|c.*1539T>A|p.(%3D)|2187/18315|649/648|217/216||;allele_of_genes="MGI:104510";alleles="MGI:2155420";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.98052207A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2161059";strain_name="BALB/cRl";symbol="Myo7a<sup>3336SB</sup>";symbol_text="Myo7a<3336SB>"
7 98062657 NC_000073.6:g.98062657A>T A T . . ANN=T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000084979.10|Coding|38/48|c.5251T>A|p.(F1751I)|5373/57848|5251/6501|1751/2167||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107122.7|Coding|39/49|c.5269T>A|p.(F1757I)|5391/57848|5269/6519|1757/2173||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107127.7|Coding|39/49|c.5284T>A|p.(F1762I)|5554/67879|5284/6534|1762/2178||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107128.7|Coding|39/49|c.5398T>A|p.(F1800I)|5689/68465|5398/6648|1800/2216||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000205746.1|Coding|37/47|c.5251T>A|p.(F1751I)|5308/55658|5251/6495|1751/2165||,T|3_prime_UTR_exon_variant|LOW|Myo7a|17921|transcript|ENSMUST00000156992.7|Coding|8/18|c.*391T>A|p.(%3D)|1039/18315|649/648|217/216||,T|non_coding_transcript_exon_variant|LOW|Myo7a|17921|transcript|ENSMUST00000124787.1|Noncoding|4/4|n.824T>A||824/2560||||;allele_of_genes="MGI:104510";alleles="MGI:2155417";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.98062657A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161059";strain_name="BALB/cRl";symbol="Myo7a<sup>26SB</sup>";symbol_text="Myo7a<26SB>"
7 98092446 NC_000073.6:g.98092446G>T G T . . ANN=T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000084979.10|Coding|12/48|c.1482C>A|p.(N494K)|1604/57848|1482/6501|494/2167||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107122.7|Coding|13/49|c.1500C>A|p.(N500K)|1622/57848|1500/6519|500/2173||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107127.7|Coding|13/49|c.1515C>A|p.(N505K)|1785/67879|1515/6534|505/2178||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107128.7|Coding|13/49|c.1515C>A|p.(N505K)|1806/68465|1515/6648|505/2216||,T|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000205746.1|Coding|11/47|c.1482C>A|p.(N494K)|1539/55658|1482/6495|494/2165||;allele_of_genes="MGI:104510";alleles="MGI:5791997";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.98092446G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myo7a<sup>mpc142H</sup>";symbol_text="Myo7a<mpc142H>"
7 98092456 NC_000073.6:g.98092456C>G C G . . ANN=G|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000084979.10|Coding|12/48|c.1472G>C|p.(R491P)|1594/57848|1472/6501|491/2167||,G|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107122.7|Coding|13/49|c.1490G>C|p.(R497P)|1612/57848|1490/6519|497/2173||,G|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107127.7|Coding|13/49|c.1505G>C|p.(R502P)|1775/67879|1505/6534|502/2178||,G|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000107128.7|Coding|13/49|c.1505G>C|p.(R502P)|1796/68465|1505/6648|502/2216||,G|missense_variant|MODERATE|Myo7a|17921|transcript|ENSMUST00000205746.1|Coding|11/47|c.1472G>C|p.(R491P)|1529/55658|1472/6495|491/2165||;allele_of_genes="MGI:104510";alleles="MGI:1856716";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.98092456C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651429";strain_name="BALB_at_F12";symbol="Myo7a<sup>sh1</sup>";symbol_text="Myo7a<sh1>"
7 102226281 NC_000073.6:g.102226281A>G A G . . ANN=G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000033292.13|Coding|3/7|c.1A>G|p.0?|205/14695|1/765|1/255||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000119816.8|Coding|3/8|c.1A>G|p.0?|189/14649|1/195|1/65||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000120879.7|Coding|3/7|c.1A>G|p.0?|353/28206|1/753|1/251||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000126914.7|Coding|3/4|c.1A>G|p.0?|368/13181|1/305|1/101||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000129340.7|Coding|2/5|c.1A>G|p.0?|112/14728|1/246|1/82||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000138479.7|Coding|2/5|c.1A>G|p.0?|117/14182|1/630|1/210||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000138753.7|Coding|2/3|c.1A>G|p.0?|220/13017|1/370|1/123||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000140058.7|Coding|2/5|c.1A>G|p.0?|41/11722|1/246|1/82||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000142873.7|Coding|2/3|c.1A>G|p.0?|54/10518|1/407|1/135||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000143541.7|Coding|4/5|c.1A>G|p.0?|189/13728|1/239|1/79||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000145352.7|Coding|3/8|c.1A>G|p.0?|190/14537|1/195|1/65||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000146559.1|Coding|3/3|c.1A>G|p.0?|321/3280|1/74|1/24||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000146996.7|Coding|4/4|c.1A>G|p.0?|363/16074|1/165|1/55||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000153020.7|Coding|3/6|c.1A>G|p.0?|210/14585|1/632|1/210||,G|start_lost&missense_variant|HIGH|Pgap2|233575|transcript|ENSMUST00000156529.7|Coding|3/7|c.1A>G|p.0?|246/15540|1/753|1/251||,G|missense_variant|MODERATE|Pgap2|233575|transcript|ENSMUST00000140631.1|Coding|2/2|c.19A>G|p.(M7V)|268/16051|19/123|7/41||,G|non_coding_transcript_exon_variant|LOW|Pgap2|233575|transcript|ENSMUST00000124619.7|Noncoding|3/3|n.203A>G||203/4041||||,G|non_coding_transcript_exon_variant|LOW|Pgap2|233575|transcript|ENSMUST00000127804.7|Noncoding|3/4|n.180A>G||180/25927||||,G|non_coding_transcript_exon_variant|LOW|Pgap2|233575|transcript|ENSMUST00000143759.7|Noncoding|3/4|n.196A>G||196/13341||||,G|non_coding_transcript_intron_variant|LOW|Pgap2|233575|transcript|ENSMUST00000133311.7|Noncoding|2/4|n.191+2791A>G||192/14591||||,G|non_coding_transcript_intron_variant|LOW|Pgap2|233575|transcript|ENSMUST00000150891.7|Noncoding|1/5|n.59-141A>G||59/15468||||;allele_of_genes="MGI:2385286";alleles="MGI:5056366";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000073.6:g.102226281A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159747";strain_name="A/J";symbol="Pgap2<sup>clpex</sup>";symbol_text="Pgap2<clpex>"
7 102354612 NC_000073.6:g.102354612A>G A G . . ANN=G|missense_variant|MODERATE|Stim1|20866|transcript|ENSMUST00000033289.5|Coding|2/12|c.251A>G|p.(D84G)|860/169513|251/2058|84/686||,G|missense_variant|MODERATE|Stim1|20866|transcript|ENSMUST00000209255.1|Coding|2/12|c.251A>G|p.(D84G)|812/169466|251/2382|84/794||,G|missense_variant|MODERATE|Stim1|20866|transcript|ENSMUST00000211457.1|Coding|2/13|c.251A>G|p.(D84G)|339/167574|251/1623|84/541||,G|non_coding_transcript_exon_variant|LOW|Stim1|20866|transcript|ENSMUST00000210266.1|Noncoding|2/3|n.847A>G||847/119906||||;allele_of_genes="MGI:107476";alleles="MGI:3764828";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.102354612A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Stim1<sup>Sax</sup>";symbol_text="Stim1<Sax>"
7 119476863 NC_000073.6:g.119476863C>T C T . . ANN=T|missense_variant|MODERATE|Umod|22242|transcript|ENSMUST00000033263.5|Coding|3/11|c.679G>A|p.(A227T)|871/16543|679/1929|227/643||,T|missense_variant|MODERATE|Umod|22242|transcript|ENSMUST00000209095.1|Coding|3/11|c.679G>A|p.(A227T)|815/16545|679/1929|227/643||,T|coding_transcript_intron_variant|LOW|Umod|22242|transcript|ENSMUST00000207378.1|Coding|2/4|c.187-120G>A|p.(%3D)|187/5834|187/233|63/77||;allele_of_genes="MGI:102674";alleles="MGI:3712284";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.119476863C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Umod<sup>urehr4</sup>";symbol_text="Umod<urehr4>"
7 119477264 NC_000073.6:g.119477264C>A C A . . ANN=A|missense_variant|MODERATE|Umod|22242|transcript|ENSMUST00000033263.5|Coding|3/11|c.278G>T|p.(C93F)|470/16543|278/1929|93/643||,A|missense_variant|MODERATE|Umod|22242|transcript|ENSMUST00000207460.1|Coding|3/3|c.278G>T|p.(C93F)|475/2128|278/562|93/187||,A|missense_variant|MODERATE|Umod|22242|transcript|ENSMUST00000209095.1|Coding|3/11|c.278G>T|p.(C93F)|414/16545|278/1929|93/643||,A|coding_transcript_intron_variant|LOW|Umod|22242|transcript|ENSMUST00000207378.1|Coding|2/4|c.186+19G>T|p.(%3D)|187/5834|187/233|63/77||,A|non_coding_transcript_exon_variant|LOW|Umod|22242|transcript|ENSMUST00000207729.1|Noncoding|3/3|n.273G>T||273/1361||||;allele_of_genes="MGI:102674";alleles="MGI:3712279";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.119477264C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Umod<sup>Urehd1</sup>";symbol_text="Umod<Urehd1>"
7 122138365 NC_000073.6:g.122138365T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Dctn5|59288|transcript|ENSMUST00000033156.4|Coding|4/5|c.348+6T>C|p.?|442/16004|349/549|117/183||,C|splice_region_variant&non_coding_transcript_intron_variant|LOW|Dctn5|59288|transcript|ENSMUST00000123602.1|Noncoding|3/4|n.1415+6T>C||1416/15991||||;allele_of_genes="MGI:1891689";alleles="MGI:5313698";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000073.6:g.122138365T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dctn5<sup>b2b315Clo</sup>";symbol_text="Dctn5<b2b315Clo>"
7 122171661 NC_000073.6:g.122171661A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ern2|26918|transcript|ENSMUST00000033153.8|Coding|18/21|c.2209+2T>A|p.?|2262/16265|2210/2736|737/912||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ern2|26918|transcript|ENSMUST00000206198.1|Coding|18/21|c.2206+2T>A|p.?|2262/16315|2207/2460|736/820||;allele_of_genes="MGI:1349436";alleles="MGI:5607643";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.122171661A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ern2<sup>m1Btlr</sup>";symbol_text="Ern2<m1Btlr>"
7 122173819 NC_000073.6:g.122173819C>A C A . . ANN=A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Ern2|26918|transcript|ENSMUST00000033153.8|Coding|14/21|c.1575-1G>T|p.?|1627/16265|1575/2736|525/912||,A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Ern2|26918|transcript|ENSMUST00000206198.1|Coding|14/21|c.1572-1G>T|p.?|1627/16315|1572/2460|524/820||;allele_of_genes="MGI:1349436";alleles="MGI:5806430";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000073.6:g.122173819C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ern2<sup>m3Btlr</sup>";symbol_text="Ern2<m3Btlr>"
7 122180862 NC_000073.6:g.122180862A>G A G . . ANN=G|splice_region_variant&coding_transcript_intron_variant|LOW|Ern2|26918|transcript|ENSMUST00000033153.8|Coding|7/21|c.586+6T>C|p.?|639/16265|587/2736|196/912||,G|splice_region_variant&coding_transcript_intron_variant|LOW|Ern2|26918|transcript|ENSMUST00000206198.1|Coding|7/21|c.586+6T>C|p.?|642/16315|587/2460|196/820||;allele_of_genes="MGI:1349436";alleles="MGI:5789538";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000073.6:g.122180862A>G";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ern2<sup>M2Btlr</sup>";symbol_text="Ern2<M2Btlr>"
7 122289514 NC_000073.6:g.122289514T>C T C . . ANN=C|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000064921.4|Coding|1/17|c.170T>C|p.(I57T)|206/345094|170/2016|57/672||,C|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000064989.11|Coding|1/17|c.170T>C|p.(I57T)|218/339359|170/2022|57/674||,C|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000143692.7|Coding|1/18|c.170T>C|p.(I57T)|764/345649|170/2022|57/674||;allele_of_genes="MGI:97596";alleles="MGI:6305123";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.122289514T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prkcb<sup>M4Btlr</sup>";symbol_text="Prkcb<M4Btlr>"
7 122627663 NC_000073.6:g.122627663G>A G A . . ANN=A|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000064989.11|Coding|17/17|c.1871G>A|p.(R624Q)|1919/339359|1871/2022|624/674||,A|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000143692.7|Coding|17/18|c.1871G>A|p.(R624Q)|2465/345649|1871/2022|624/674||,A|coding_transcript_intron_variant|LOW|Prkcb|18751|transcript|ENSMUST00000064921.4|Coding|16/16|c.1864-6082G>A|p.(%3D)|1900/345094|1864/2016|622/672||,A|non_coding_transcript_exon_variant|LOW|Prkcb|18751|transcript|ENSMUST00000127910.1|Noncoding|3/3|n.355G>A||355/28097||||;allele_of_genes="MGI:97596";alleles="MGI:6305150";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.122627663G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prkcb<sup>M6Btlr</sup>";symbol_text="Prkcb<M6Btlr>"
7 122627693 NC_000073.6:g.122627693C>T C T . . ANN=T|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000064989.11|Coding|17/17|c.1901C>T|p.(T634I)|1949/339359|1901/2022|634/674||,T|missense_variant|MODERATE|Prkcb|18751|transcript|ENSMUST00000143692.7|Coding|17/18|c.1901C>T|p.(T634I)|2495/345649|1901/2022|634/674||,T|coding_transcript_intron_variant|LOW|Prkcb|18751|transcript|ENSMUST00000064921.4|Coding|16/16|c.1864-6052C>T|p.(%3D)|1900/345094|1864/2016|622/672||,T|non_coding_transcript_exon_variant|LOW|Prkcb|18751|transcript|ENSMUST00000127910.1|Noncoding|3/3|n.385C>T||385/28097||||;allele_of_genes="MGI:97596";alleles="MGI:6305128";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.122627693C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prkcb<sup>M5Btlr</sup>";symbol_text="Prkcb<M5Btlr>"
7 125576120 NC_000073.6:g.125576120A>T A T . . ANN=T|missense_variant|MODERATE|Il4ra|16190|transcript|ENSMUST00000033004.7|Coding|11/11|c.1499A>T|p.(Y500F)|1902/27355|1499/2433|500/811||,T|3_prime_UTR_exon_variant|LOW|Il4ra|16190|transcript|ENSMUST00000206846.1|Coding|12/12|c.*920A>T|p.(%3D)|1849/25681|694/693|232/231||;allele_of_genes="MGI:105367";alleles="MGI:2680722";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.125576120A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Il4ra<sup>tm1Tch</sup>";symbol_text="Il4ra<tm1Tch>"
7 125576348 NC_000073.6:g.125576348_125576349delinsGA AG GA . . ANN=GA|mnv|HIGH|Il4ra|16190|transcript|ENSMUST00000033004.7|Coding|11/11|c.1727_1728delAGinsGA|p.(Q576R)|2130/27355|1727/2433|576/811||,GA|3_prime_UTR_exon_variant|LOW|Il4ra|16190|transcript|ENSMUST00000206846.1|Coding|12/12|c.*1148_*1149delAGinsGA|p.(%3D)|2077/25681|694/693|232/231||;allele_of_genes="MGI:105367";alleles="MGI:3720593";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.125576348_125576349delinsGA";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Il4ra<sup>tm2Tch</sup>";symbol_text="Il4ra<tm2Tch>"
7 125576747 NC_000073.6:g.125576747_125576748delinsTT AC TT . . ANN=TT|mnv|HIGH|Il4ra|16190|transcript|ENSMUST00000033004.7|Coding|11/11|c.2126_2127delACinsTT|p.(Y709F)|2529/27355|2126/2433|709/811||,TT|3_prime_UTR_exon_variant|LOW|Il4ra|16190|transcript|ENSMUST00000206846.1|Coding|12/12|c.*1547_*1548delACinsTT|p.(%3D)|2476/25681|694/693|232/231||;allele_of_genes="MGI:105367";alleles="MGI:4455123";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.125576747_125576748delinsTT";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Il4ra<sup>tm3.1Tch</sup>";symbol_text="Il4ra<tm3.1Tch>"
7 126763512 NC_000073.6:g.126763512A>T A T . . ANN=T|stop_gained&splice_region_variant|HIGH|Mapk3|26417|transcript|ENSMUST00000050201.10|Coding|4/7|c.661A>T|p.(K221*)|706/5245|661/1143|221/381||,T|stop_gained&splice_region_variant|HIGH|Mapk3|26417|transcript|ENSMUST00000057669.15|Coding|4/9|c.661A>T|p.(K221*)|706/6219|661/1143|221/381||,T|stop_gained&splice_region_variant|HIGH|Mapk3|26417|transcript|ENSMUST00000091328.3|Coding|3/8|c.316A>T|p.(K106*)|622/5223|316/798|106/266||,T|missense_variant&splice_region_variant|MODERATE|Mapk3|26417|transcript|ENSMUST00000205657.1|Coding|4/7|c.656A>T|p.(Q219L)|656/5194|656/1005|219/335||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Mapk3|26417|transcript|ENSMUST00000135649.1|Noncoding|1/3|n.236A>T||236/1084||||,T|coding_transcript_intron_variant|LOW|Mapk3|26417|transcript|ENSMUST00000206272.1|Coding|2/4|c.356-229A>T|p.(%3D)|356/3824|356/641|119/213||;allele_of_genes="MGI:1346859";alleles="MGI:5640774";geneLevelConsequence="stop_gained,splice_region_variant";hgvs_nomenclature="NC_000073.6:g.126763512A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mapk3<sup>m1Btlr</sup>";symbol_text="Mapk3<m1Btlr>"
7 127893359 NC_000073.6:g.127893359T>C T C . . ANN=C|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000033074.7|Coding|3/3|c.416A>G|p.(Y139C)|452/2555|416/486|139/162||,C|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000119922.1|Coding|3/3|c.212A>G|p.(Y71C)|266/2072|212/282|71/94||,C|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000206053.1|Coding|3/3|c.269A>G|p.(Y90C)|312/2187|269/339|90/113||,C|missense_variant|MODERATE|Gm21974|330657|transcript|ENSMUST00000126662.1|Coding|3/13|c.289A>G|p.(M97V)|289/9228|289/359|97/119||;allele_of_genes="MGI:106442,MGI:106442";alleles="MGI:3605985,MGI:3605985";geneLevelConsequence="missense_variant,missense_variant";hgvs_nomenclature="NC_000073.6:g.127893359T>C";impact="MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5650832";strain_name="wild";symbol="Vkorc1<sup>Y139C</sup>";symbol_text="Vkorc1<Y139C>"
7 127893392 NC_000073.6:g.127893392A>G A G . . ANN=G|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000033074.7|Coding|3/3|c.383T>C|p.(L128S)|419/2555|383/486|128/162||,G|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000119922.1|Coding|3/3|c.179T>C|p.(L60S)|233/2072|179/282|60/94||,G|missense_variant|MODERATE|Vkorc1|27973|transcript|ENSMUST00000206053.1|Coding|3/3|c.236T>C|p.(L79S)|279/2187|236/339|79/113||,G|missense_variant|MODERATE|Gm21974|330657|transcript|ENSMUST00000126662.1|Coding|3/13|c.256T>C|p.(Y86H)|256/9228|256/359|86/119||;allele_of_genes="MGI:106442,MGI:106442";alleles="MGI:3605979,MGI:3605979";geneLevelConsequence="missense_variant,missense_variant";hgvs_nomenclature="NC_000073.6:g.127893392A>G";impact="MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5650832";strain_name="wild";symbol="Vkorc1<sup>L128S</sup>";symbol_text="Vkorc1<L128S>"
7 133677147 NC_000073.6:g.133677147A>T A T . . ANN=T|missense_variant|MODERATE|Mmp21|214766|transcript|ENSMUST00000033278.7|Coding|4/7|c.973T>A|p.(Y325N)|988/5792|973/1707|325/569||,T|missense_variant|MODERATE|Mmp21|214766|transcript|ENSMUST00000122136.1|Coding|4/6|c.973T>A|p.(Y325N)|988/5706|973/1248|325/416||,T|non_coding_transcript_exon_variant|LOW|Mmp21|214766|transcript|ENSMUST00000131894.1|Noncoding|3/6|n.1795T>A||1795/5792||||;allele_of_genes="MGI:2664387";alleles="MGI:5554438";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.133677147A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mmp21<sup>b2b2458Clo</sup>";symbol_text="Mmp21<b2b2458Clo>"
7 133678710 NC_000073.6:g.133678710C>A C A . . ANN=A|missense_variant|MODERATE|Mmp21|214766|transcript|ENSMUST00000033278.7|Coding|2/7|c.530G>T|p.(W177L)|545/5792|530/1707|177/569||,A|missense_variant|MODERATE|Mmp21|214766|transcript|ENSMUST00000122136.1|Coding|2/6|c.530G>T|p.(W177L)|545/5706|530/1248|177/416||,A|non_coding_transcript_exon_variant|LOW|Mmp21|214766|transcript|ENSMUST00000131894.1|Noncoding|1/6|n.1352G>T||1352/5792||||;allele_of_genes="MGI:2664387";alleles="MGI:5311376";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.133678710C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mmp21<sup>b2b873Clo</sup>";symbol_text="Mmp21<b2b873Clo>"
7 134766265 NC_000073.6:g.134766265T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock1|330662|transcript|ENSMUST00000084488.4|Coding|16/51|c.1561+2T>A|p.?|1674/502953|1562/5598|521/1866||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Dock1|330662|transcript|ENSMUST00000210464.1|Noncoding|16/18|n.1619+2T>A||1620/107079||||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Dock1|330662|transcript|ENSMUST00000210617.1|Noncoding|16/29|n.1669+2T>A||1670/353237||||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Dock1|330662|transcript|ENSMUST00000211570.1|Noncoding|16/26|n.1706+2T>A||1707/206290||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock1|330662|transcript|ENSMUST00000211593.1|Coding|16/20|c.1561+2T>A|p.?|1674/112500|1562/2142|521/714||;allele_of_genes="MGI:2429765";alleles="MGI:5618859";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000073.6:g.134766265T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock1<sup>b2b3190Clo</sup>";symbol_text="Dock1<b2b3190Clo>"
7 139987922 NC_000073.6:g.139987922C>G C G . . ANN=G|missense_variant|MODERATE|Adam8|11501|transcript|ENSMUST00000026546.15|Coding|11/24|c.985G>C|p.(E329Q)|1062/13617|985/2478|329/826||,G|missense_variant|MODERATE|Adam8|11501|transcript|ENSMUST00000106069.8|Coding|11/24|c.988G>C|p.(E330Q)|1079/13631|988/2481|330/827||,G|missense_variant|MODERATE|Adam8|11501|transcript|ENSMUST00000148670.7|Coding|11/20|c.985G>C|p.(E329Q)|1076/8709|985/2234|329/744||,G|non_coding_transcript_exon_variant|LOW|Adam8|11501|transcript|ENSMUST00000128332.7|Noncoding|11/22|n.1076G>C||1076/13631||||,G|non_coding_transcript_exon_variant|LOW|Adam8|11501|transcript|ENSMUST00000149915.1|Noncoding|3/4|n.180G>C||180/777||||,G|non_coding_transcript_exon_variant|LOW|Adam8|11501|transcript|ENSMUST00000156647.7|Noncoding|2/13|n.267G>C||267/9503||||;allele_of_genes="MGI:107825";alleles="MGI:4418309";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.139987922C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159784";strain_name="DBA/1LacJ";symbol="Adam8<sup>tm1.1Mdz</sup>";symbol_text="Adam8<tm1.1Mdz>"
7 141264022 NC_000073.6:g.141264022T>C T C . . ANN=C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000026571.10|Coding|8/10|c.736A>G|p.(T246A)|1236/3299|736/1374|246/458||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000097952.8|Coding|7/9|c.643A>G|p.(T215A)|1085/3240|643/1281|215/427||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000106023.7|Coding|8/10|c.640A>G|p.(T214A)|1080/3716|640/1278|214/426||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000123525.1|Coding|2/3|c.245A>G|p.(D82G)|245/1861|245/751|82/250||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000209899.1|Coding|6/8|c.581A>G|p.(D194G)|964/2815|581/714|194/238||,C|non_coding_transcript_exon_variant|LOW|Irf7|.|transcript|ENSMUST00000210506.1|Noncoding|1/1|n.2402A>G||2402/3240||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000127223.7|Noncoding|4/4|n.477A>G||477/1341||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000131399.7|Noncoding|5/5|n.764A>G||764/2072||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000155744.7|Noncoding|7/9|n.1246A>G||1246/3236||||;allele_of_genes="MGI:1859212";alleles="MGI:5615723";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.141264022T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf7<sup>M2Btlr</sup>";symbol_text="Irf7<M2Btlr>"
7 141265140 NC_000073.6:g.141265140T>C T C . . ANN=C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000026571.10|Coding|4/10|c.329A>G|p.(D110G)|829/3299|329/1374|110/458||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000097952.8|Coding|4/9|c.329A>G|p.(D110G)|771/3240|329/1281|110/427||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000106023.7|Coding|4/10|c.329A>G|p.(D110G)|769/3716|329/1278|110/426||,C|missense_variant|MODERATE|Irf7|54123|transcript|ENSMUST00000209899.1|Coding|3/8|c.329A>G|p.(D110G)|712/2815|329/714|110/238||,C|synonymous_variant|LOW|Irf7|54123|transcript|ENSMUST00000123525.1|Coding|1/3|c.153A>G|p.(%3D)|153/1861|153/751|51/250||,C|non_coding_transcript_exon_variant|LOW|Irf7|.|transcript|ENSMUST00000210506.1|Noncoding|1/1|n.1284A>G||1284/3240||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000148414.1|Noncoding|1/3|n.334A>G||334/1251||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000155744.7|Noncoding|4/9|n.770A>G||770/3236||||,C|non_coding_transcript_exon_variant|LOW|Irf7|54123|transcript|ENSMUST00000156938.1|Noncoding|3/3|n.400A>G||400/908||||,C|non_coding_transcript_intron_variant|LOW|Irf7|54123|transcript|ENSMUST00000131399.7|Noncoding|1/4|n.423-357A>G||423/2072||||;allele_of_genes="MGI:1859212";alleles="MGI:4442855";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.141265140T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf7<sup>m1Btlr</sup>";symbol_text="Irf7<m1Btlr>"
7 141695682 NC_000073.6:g.141695682G>T G T . . ANN=T|missense_variant|MODERATE|Muc2|17831|transcript|ENSMUST00000185406.6|Coding|13/20|c.1682G>T|p.(C561F)|1711/8443|1682/2661|561/887||;allele_of_genes="MGI:1339364";alleles="MGI:3851216";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.141695682G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Muc2<sup>M1Btlr</sup>";symbol_text="Muc2<M1Btlr>"
7 141753719 NC_000073.6:g.141753719T>C T C . . ANN=C|missense_variant|MODERATE|Muc2|17831|transcript|ENSMUST00000026590.8|Coding|14/16|c.1093T>C|p.(C365R)|1520/7859|1093/1452|365/484||,C|missense_variant|MODERATE|Muc2|17831|transcript|ENSMUST00000187945.6|Coding|17/19|c.2411T>C|p.(L804P)|2411/10082|2411/2770|804/923||;allele_of_genes="MGI:1339364";alleles="MGI:6113610";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.141753719T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Muc2<sup>m3Btlr</sup>";symbol_text="Muc2<m3Btlr>"
7 143191433 NC_000073.6:g.143191433C>T C T . . ANN=T|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000009689.10|Coding|7/16|c.932C>T|p.(T311I)|1037/319789|932/2007|311/669||,T|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000185383.1|Coding|7/12|c.740C>T|p.(T247I)|740/318575|740/1323|247/441||;allele_of_genes="MGI:108083";alleles="MGI:3056648";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.143191433C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Kcnq1<sup>tm2Kpfe</sup>";symbol_text="Kcnq1<tm2Kpfe>"
7 143191520 NC_000073.6:g.143191520C>A C A . . ANN=A|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000009689.10|Coding|7/16|c.1019C>A|p.(A340E)|1124/319789|1019/2007|340/669||,A|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000185383.1|Coding|7/12|c.827C>A|p.(A276E)|827/318575|827/1323|276/441||;allele_of_genes="MGI:108083";alleles="MGI:3056651";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.143191520C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Kcnq1<sup>tm3Kpfe</sup>";symbol_text="Kcnq1<tm3Kpfe>"
7 143191520 NC_000073.6:g.143191520C>T C T . . ANN=T|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000009689.10|Coding|7/16|c.1019C>T|p.(A340V)|1124/319789|1019/2007|340/669||,T|missense_variant|MODERATE|Kcnq1|16535|transcript|ENSMUST00000185383.1|Coding|7/12|c.827C>T|p.(A276V)|827/318575|827/1323|276/441||;allele_of_genes="MGI:108083";alleles="MGI:3056652";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000073.6:g.143191520C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Kcnq1<sup>tm4Kpfe</sup>";symbol_text="Kcnq1<tm4Kpfe>"
7 143195317 NC_000073.6:g.143195317A>T A T . . ANN=T|stop_gained|HIGH|Kcnq1|16535|transcript|ENSMUST00000009689.10|Coding|10/16|c.1303A>T|p.(K435*)|1408/319789|1303/2007|435/669||,T|stop_gained|HIGH|Kcnq1|16535|transcript|ENSMUST00000185383.1|Coding|10/12|c.1111A>T|p.(K371*)|1111/318575|1111/1323|371/441||;allele_of_genes="MGI:108083";alleles="MGI:5490247";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000073.6:g.143195317A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Kcnq1<sup>m1Anu</sup>";symbol_text="Kcnq1<m1Anu>"
8 3636354 NC_000074.6:g.3636354A>T A T . . ANN=T|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Stxbp2|20911|transcript|ENSMUST00000004745.8|Coding|11/18|c.959-2A>T|p.?|959/11626|959/1783|320/594||,T|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Stxbp2|20911|transcript|ENSMUST00000160708.7|Coding|11/18|c.961-2A>T|p.?|1174/12690|961/1782|321/594||;allele_of_genes="MGI:107370";alleles="MGI:5563406";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000074.6:g.3636354A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5566620";strain_name="C57BL/6NCrlAnu";symbol="Stxbp2<sup>m1Anu</sup>";symbol_text="Stxbp2<m1Anu>"
8 10031534 NC_000074.6:g.10031534T>C T C . . ANN=C|missense_variant|MODERATE|Tnfsf13b|24099|transcript|ENSMUST00000033892.8|Coding|5/6|c.638T>C|p.(M213T)|827/28965|638/873|213/291||,C|missense_variant|MODERATE|Tnfsf13b|24099|transcript|ENSMUST00000207792.1|Coding|6/7|c.695T>C|p.(M232T)|905/32440|695/930|232/310||,C|3_prime_UTR_exon_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000208683.1|Coding|6/7|c.*168T>C|p.(%3D)|1129/29530|586/585|196/195||,C|non_coding_transcript_exon_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000208770.1|Noncoding|1/2|n.217T>C||217/4533||||;allele_of_genes="MGI:1344376";alleles="MGI:5632172";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.10031534T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tnfsf13b<sup>m2Btlr</sup>";symbol_text="Tnfsf13b<m2Btlr>"
8 10031661 NC_000074.6:g.10031661G>A G A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000033892.8|Coding|5/5|c.760+5G>A|p.?|950/28965|761/873|254/291||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000207792.1|Coding|6/6|c.817+5G>A|p.?|1028/32440|818/930|273/310||,A|splice_region_variant&3_prime_UTR_intron_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000208683.1|Coding|6/6|c.*290+5G>A|p.(%3D)|1252/29530|586/585|196/195||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Tnfsf13b|24099|transcript|ENSMUST00000208770.1|Noncoding|1/1|n.339+5G>A||340/4533||||;allele_of_genes="MGI:1344376";alleles="MGI:5632166";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000074.6:g.10031661G>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tnfsf13b<sup>M1Btlr</sup>";symbol_text="Tnfsf13b<M1Btlr>"
8 10495316 NC_000074.6:g.10495316A>T A T . . ANN=T|coding_transcript_intron_variant|LOW|Myo16|244281|transcript|ENSMUST00000042103.8|Coding|22/34|c.2728-3801A>T|p.(%3D)|2728/362170|2728/5634|910/1878||,T|coding_transcript_intron_variant|LOW|Myo16|244281|transcript|ENSMUST00000207204.1|Coding|20/31|c.2560-3801A>T|p.(%3D)|2596/362206|2560/5592|854/1864||,T|coding_transcript_intron_variant|LOW|Myo16|244281|transcript|ENSMUST00000207477.1|Coding|23/34|c.2728-3801A>T|p.(%3D)|3045/480775|2728/5760|910/1920||;allele_of_genes="MGI:1919153";alleles="MGI:5792024";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000074.6:g.10495316A>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ces2f<sup>mpc200H</sup>";symbol_text="Ces2f<mpc200H>"
8 11217920 NC_000074.6:g.11217920C>T C T . . ANN=T|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000033898.9|Coding|37/52|c.3191G>A|p.(G1064D)|3418/114404|3191/5010|1064/1670||,T|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000209735.1|Coding|37/53|c.3191G>A|p.(G1064D)|3281/114259|3191/4689|1064/1563||;allele_of_genes="MGI:88454";alleles="MGI:2178448";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.11217920C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651831";strain_name="(C3H/HeN_x_BALB/cAnN)F1";symbol="Col4a1<sup>Svc</sup>";symbol_text="Col4a1<Svc>"
8 11219101 NC_000074.6:g.11219101T>C T C . . ANN=C|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000033898.9|Coding|34/52|c.2848A>G|p.(K950E)|3075/114404|2848/5010|950/1670||,C|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000209735.1|Coding|34/53|c.2848A>G|p.(K950E)|2938/114259|2848/4689|950/1563||,C|3_prime_UTR_exon_variant|LOW|Col4a1|12826|transcript|ENSMUST00000209661.1|Coding|4/7|c.*9A>G|p.(%3D)|390/23114|382/381|128/127||;allele_of_genes="MGI:88454";alleles="MGI:2178446";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.11219101T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651831";strain_name="(C3H/HeN_x_BALB/cAnN)F1";symbol="Col4a1<sup>Raw</sup>";symbol_text="Col4a1<Raw>"
8 11226343 NC_000074.6:g.11226343C>A C A . . ANN=A|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000033898.9|Coding|26/52|c.1879G>T|p.(G627W)|2106/114404|1879/5010|627/1670||,A|missense_variant|MODERATE|Col4a1|12826|transcript|ENSMUST00000209735.1|Coding|26/53|c.1879G>T|p.(G627W)|1969/114259|1879/4689|627/1563||,A|coding_transcript_intron_variant|LOW|Col4a1|12826|transcript|ENSMUST00000209661.1|Coding|1/6|c.28-5994G>T|p.(%3D)|28/23114|28/381|10/127||;allele_of_genes="MGI:88454";alleles="MGI:1856689";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.11226343C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Col4a1<sup>Bru</sup>";symbol_text="Col4a1<Bru>"
8 11526034 NC_000074.6:g.11526034A>T A T . . ANN=T|missense_variant|MODERATE|Cars2|71941|transcript|ENSMUST00000049461.6|Coding|9/15|c.913T>A|p.(S305T)|1019/36807|913/1659|305/553||,T|3_prime_UTR_exon_variant|LOW|Cars2|71941|transcript|ENSMUST00000210478.1|Coding|9/15|c.*423T>A|p.(%3D)|1168/36721|682/681|228/227||,T|3_prime_UTR_exon_variant|LOW|Cars2|71941|transcript|ENSMUST00000210599.1|Coding|9/9|c.*269T>A|p.(%3D)|1097/24669|814/813|272/271||,T|non_coding_transcript_exon_variant|LOW|Cars2|71941|transcript|ENSMUST00000209218.1|Noncoding|9/10|n.977T>A||977/28892||||,T|non_coding_transcript_exon_variant|LOW|Cars2|71941|transcript|ENSMUST00000211406.1|Noncoding|9/10|n.999T>A||999/28879||||;allele_of_genes="MGI:1919191";alleles="MGI:4840539";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.11526034A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cars2<sup>m1Btlr</sup>";symbol_text="Cars2<m1Btlr>"
8 21995603 NC_000074.6:g.21995603T>C T C . . ANN=C|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000006742.10|Coding|20/21|c.4066A>G|p.(M1356V)|4316/67521|4066/4389|1356/1463||,C|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000110738.2|Coding|21/22|c.3721A>G|p.(M1241V)|3721/65369|3721/4044|1241/1348||;allele_of_genes="MGI:103297";alleles="MGI:1856220";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.21995603T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161060";strain_name="DL";symbol="Atp7b<sup>tx</sup>";symbol_text="Atp7b<tx>"
8 21998266 NC_000074.6:g.21998266T>G T G . . ANN=G|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000006742.10|Coding|17/21|c.3649A>C|p.(T1217P)|3899/67521|3649/4389|1217/1463||,G|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000110738.2|Coding|18/22|c.3304A>C|p.(T1102P)|3304/65369|3304/4044|1102/1348||;allele_of_genes="MGI:103297";alleles="MGI:6113858";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.21998266T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atp7b<sup>m1Btlr</sup>";symbol_text="Atp7b<m1Btlr>"
8 22013602 NC_000074.6:g.22013602C>T C T . . ANN=T|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000006742.10|Coding|8/21|c.2135G>A|p.(G712D)|2385/67521|2135/4389|712/1463||,T|missense_variant|MODERATE|Atp7b|11979|transcript|ENSMUST00000110738.2|Coding|9/22|c.1790G>A|p.(G597D)|1790/65369|1790/4044|597/1348||;allele_of_genes="MGI:103297";alleles="MGI:1856221";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.22013602C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159741";strain_name="C3H/HeJ";symbol="Atp7b<sup>tx-J</sup>";symbol_text="Atp7b<tx-J>"
8 22079145 NC_000074.6:g.22079145C>T C T . . ANN=T|missense_variant|MODERATE|Nek5|330721|transcript|ENSMUST00000169834.1|Coding|18/20|c.1660G>A|p.(A554T)|1749/51438|1660/1845|554/615||,T|missense_variant|MODERATE|Nek5|330721|transcript|ENSMUST00000209656.1|Coding|18/19|c.1660G>A|p.(A554T)|1737/51405|1660/1884|554/628||;allele_of_genes="MGI:2142824";alleles="MGI:5792084";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.22079145C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nek5<sup>mpc234H</sup>";symbol_text="Nek5<mpc234H>"
8 22666020 NC_000074.6:g.22666020A>G A G . . ANN=G|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000033939.12|Coding|17/22|c.1709T>C|p.(L570P)|1836/47367|1709/2274|570/758||,G|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000063401.9|Coding|17/21|c.1709T>C|p.(L570P)|1847/46822|1709/2217|570/739||,G|3_prime_UTR_exon_variant|LOW|Ikbkb|16150|transcript|ENSMUST00000125314.7|Coding|17/22|c.*375T>C|p.(%3D)|1793/47328|1330/1329|444/443||,G|3_prime_UTR_exon_variant|LOW|Ikbkb|16150|transcript|ENSMUST00000135326.7|Coding|17/21|c.*375T>C|p.(%3D)|1787/47322|1330/1329|444/443||,G|non_coding_transcript_exon_variant|LOW|Ikbkb|16150|transcript|ENSMUST00000146212.7|Noncoding|15/20|n.4246T>C||4246/46222||||;allele_of_genes="MGI:1338071";alleles="MGI:5691958";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.22666020A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ikbkb<sup>M1Btlr</sup>";symbol_text="Ikbkb<M1Btlr>"
8 22675036 NC_000074.6:g.22675036T>C T C . . ANN=C|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000033939.12|Coding|9/22|c.727A>G|p.(I243V)|854/47367|727/2274|243/758||,C|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000063401.9|Coding|9/21|c.727A>G|p.(I243V)|865/46822|727/2217|243/739||,C|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000125314.7|Coding|9/22|c.727A>G|p.(I243V)|816/47328|727/1329|243/443||,C|missense_variant|MODERATE|Ikbkb|16150|transcript|ENSMUST00000135326.7|Coding|9/21|c.727A>G|p.(I243V)|810/47322|727/1329|243/443||,C|non_coding_transcript_exon_variant|LOW|Ikbkb|16150|transcript|ENSMUST00000146212.7|Noncoding|9/20|n.854A>G||854/46222||||;allele_of_genes="MGI:1338071";alleles="MGI:6304916";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.22675036T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ikbkb<sup>M2Btlr</sup>";symbol_text="Ikbkb<M2Btlr>"
8 33255578 NC_000074.6:g.33255578C>T C T . . ANN=T|missense_variant|MODERATE|Wrn|22427|transcript|ENSMUST00000033990.6|Coding|30/34|c.3502G>A|p.(G1168S)|3660/149791|3502/4206|1168/1402||,T|missense_variant|MODERATE|Wrn|22427|transcript|ENSMUST00000033991.12|Coding|30/34|c.3502G>A|p.(G1168S)|3605/151144|3502/4206|1168/1402||,T|missense_variant|MODERATE|Wrn|22427|transcript|ENSMUST00000211498.1|Coding|24/28|c.2773G>A|p.(G925S)|3499/94867|2773/3477|925/1159||;allele_of_genes="MGI:109635";alleles="MGI:5648002";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.33255578C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Wrn<sup>b2b3121.1Clo</sup>";symbol_text="Wrn<b2b3121.1Clo>"
8 45397697 NC_000074.6:g.45397697A>G A G . . ANN=G|missense_variant|MODERATE|Tlr3|.|transcript|ENSMUST00000210013.1|Coding|1/1|c.590T>C|p.(V197A)|590/2417|590/921|197/307||,G|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000034056.11|Coding|6/7|c.2162T>C|p.(V721A)|2603/14955|2162/2718|721/906||,G|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000167106.2|Coding|5/6|c.2162T>C|p.(V721A)|2408/14836|2162/2718|721/906||,G|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000209772.1|Coding|6/7|c.2162T>C|p.(V721A)|2505/14503|2162/2718|721/906||;allele_of_genes="MGI:2156367";alleles="MGI:5688601";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.45397697A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr3<sup>M1Btlr</sup>";symbol_text="Tlr3<M1Btlr>"
8 45402981 NC_000074.6:g.45402981A>T A T . . ANN=T|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000034056.11|Coding|4/7|c.161T>A|p.(I54K)|602/14955|161/2718|54/906||,T|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000167106.2|Coding|3/6|c.161T>A|p.(I54K)|407/14836|161/2718|54/906||,T|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000209772.1|Coding|4/7|c.161T>A|p.(I54K)|504/14503|161/2718|54/906||,T|missense_variant|MODERATE|Tlr3|142980|transcript|ENSMUST00000211370.1|Coding|4/4|c.161T>A|p.(I54K)|589/7756|161/279|54/93||;allele_of_genes="MGI:2156367";alleles="MGI:6113649";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.45402981A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr3<sup>M2Btlr</sup>";symbol_text="Tlr3<M2Btlr>"
8 46635553 NC_000074.6:g.46635553G>C G C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Casp3|12367|transcript|ENSMUST00000093517.6|Coding|5/6|c.483+1G>C|p.?|601/21323|484/834|162/278||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Casp3|12367|transcript|ENSMUST00000211115.1|Coding|5/6|c.483+1G>C|p.?|710/22399|484/834|162/278||,C|coding_transcript_intron_variant|LOW|Casp3|12367|transcript|ENSMUST00000210534.1|Coding|4/4|c.349+1185G>C|p.(%3D)|425/22125|350/402|117/134||;allele_of_genes="MGI:107739";alleles="MGI:4366356";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000074.6:g.46635553G>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Casp3<sup>mldy</sup>";symbol_text="Casp3<mldy>"
8 57322231 NC_000074.6:g.57322231_57322238delinsGAGGACGA CGGCGCAG GAGGACGA . . ANN=GAGGACGA|mnv|HIGH|Hand2|15111|transcript|ENSMUST00000040104.4|Coding|1/2|c.325_332delCGGCGCAGinsGAGGACGA|p.(R109_R111delinsEDE)|1249/3651|325/654|109/218||,GAGGACGA|non_coding_transcript_intron_variant|LOW|AV026068|.|transcript|ENSMUST00000187718.1|Noncoding|1/1|n.191-1024_191-1017delCTGCGCCGinsTCGTCCTC||191/3229||||,GAGGACGA|non_coding_transcript_intron_variant|LOW|AV026068|.|transcript|ENSMUST00000189098.1|Noncoding|1/1|n.216-1181_216-1174delCTGCGCCGinsTCGTCCTC||216/3247||||;allele_of_genes="MGI:103580";alleles="MGI:3838372";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.57322231_57322238delinsGAGGACGA";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Hand2<sup>tm2Eno</sup>";symbol_text="Hand2<tm2Eno>"
8 64017633 NC_000074.6:g.64017633A>T A T . . ANN=T|missense_variant|MODERATE|Tll1|21892|transcript|ENSMUST00000066166.5|Coding|20/21|c.2755T>A|p.(W919R)|3365/191063|2755/3042|919/1014||;allele_of_genes="MGI:106923";alleles="MGI:5560905";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.64017633A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tll1<sup>b2b2476Clo</sup>";symbol_text="Tll1<b2b2476Clo>"
8 64611434 NC_000074.6:g.64611434A>G A G . . ANN=G|missense_variant|MODERATE|Cpe|12876|transcript|ENSMUST00000048967.8|Coding|4/9|c.730T>C|p.(S244P)|835/100513|730/1431|244/477||,G|non_coding_transcript_exon_variant|LOW|Cpe|12876|transcript|ENSMUST00000210680.1|Noncoding|4/5|n.490T>C||490/11295||||;allele_of_genes="MGI:101932";alleles="MGI:1856395";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.64611434A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2163581";strain_name="HRS/J";symbol="Cpe<sup>fat</sup>";symbol_text="Cpe<fat>"
8 71612941 NC_000074.6:g.71612941T>A T A . . ANN=A|missense_variant|MODERATE|Colgalt1|234407|transcript|ENSMUST00000047903.9|Coding|3/12|c.388T>A|p.(W130R)|590/13914|388/1854|130/618||,A|non_coding_transcript_exon_variant|LOW|Colgalt1|234407|transcript|ENSMUST00000212216.1|Noncoding|3/11|n.417T>A||417/12353||||;allele_of_genes="MGI:1924348";alleles="MGI:6194325";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.71612941T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Colgalt1<sup>fosse</sup>";symbol_text="Colgalt1<fosse>"
8 71685545 NC_000074.6:g.71685545T>A T A . . ANN=A|missense_variant|MODERATE|Jak3|16453|transcript|ENSMUST00000051995.13|Coding|19/25|c.2639T>A|p.(V880D)|2936/14280|2639/3303|880/1101||,A|missense_variant|MODERATE|Jak3|16453|transcript|ENSMUST00000110012.1|Coding|19/24|c.2639T>A|p.(V880D)|2699/11008|2639/3303|880/1101||,A|missense_variant|MODERATE|Jak3|16453|transcript|ENSMUST00000110013.9|Coding|19/24|c.2639T>A|p.(V880D)|2936/12261|2639/3303|880/1101||,A|non_coding_transcript_exon_variant|LOW|Jak3|16453|transcript|ENSMUST00000130624.1|Noncoding|16/22|n.3317T>A||3317/11890||||;allele_of_genes="MGI:99928";alleles="MGI:6305331";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.71685545T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Jak3<sup>m8Btlr</sup>";symbol_text="Jak3<m8Btlr>"
8 77720062 NC_000074.6:g.77720062T>A T A . . ANN=A|missense_variant|MODERATE|Ednra|13617|transcript|ENSMUST00000034029.7|Coding|2/8|c.386A>T|p.(Y129F)|782/61406|386/1284|129/428||,A|non_coding_transcript_exon_variant|LOW|Ednra|13617|transcript|ENSMUST00000146561.1|Noncoding|2/5|n.810A>T||810/54771||||,A|non_coding_transcript_intron_variant|LOW|4933431K23Rik|.|transcript|ENSMUST00000153937.1|Noncoding|5/7|n.630+15836T>A||631/109723||||;allele_of_genes="MGI:105923";alleles="MGI:5618847";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.77720062T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Ednra<sup>m1Mhda</sup>";symbol_text="Ednra<m1Mhda>"
8 79356230 NC_000074.6:g.79356229_79356230delinsCG T G . . ANN=G|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000066091.13|Coding|3/7|c.640A>C|p.(S214R)|1087/61124|640/1398|214/466||,G|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000109885.7|Coding|3/6|c.640A>C|p.(S214R)|1087/57939|640/1287|214/429||,G|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000066081.3|Noncoding|3/4|n.1087A>C||1087/44163||||,G|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000215983.1|Noncoding|1/3|n.449A>C||449/6952||||;allele_of_genes="MGI:109452";alleles="MGI:3045219";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.79356229_79356230delinsCG";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Smad1<sup>tm2Sor</sup>";symbol_text="Smad1<tm2Sor>"
8 79356242 NC_000074.6:g.79356242_79356245delinsCGGC AGCT CGGC . . ANN=CGGC|mnv|HIGH|Smad1|17125|transcript|ENSMUST00000066091.13|Coding|3/7|c.625_628delAGCTinsGCCG|p.(S209_S210delinsAA)|1072/61124|625/1398|209/466||,CGGC|mnv|HIGH|Smad1|17125|transcript|ENSMUST00000109885.7|Coding|3/6|c.625_628delAGCTinsGCCG|p.(S209_S210delinsAA)|1072/57939|625/1287|209/429||,CGGC|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000066081.3|Noncoding|3/4|n.1072_1075delAGCTinsGCCG||1072/44163||||,CGGC|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000215983.1|Noncoding|1/3|n.434_437delAGCTinsGCCG||434/6952||||;allele_of_genes="MGI:109452";alleles="MGI:3045219";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.79356242_79356245delinsCGGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Smad1<sup>tm2Sor</sup>";symbol_text="Smad1<tm2Sor>"
8 79356254 NC_000074.6:g.79356254A>C A C . . ANN=C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000066091.13|Coding|3/7|c.616T>G|p.(S206A)|1063/61124|616/1398|206/466||,C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000109885.7|Coding|3/6|c.616T>G|p.(S206A)|1063/57939|616/1287|206/429||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000066081.3|Noncoding|3/4|n.1063T>G||1063/44163||||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000215983.1|Noncoding|1/3|n.425T>G||425/6952||||;allele_of_genes="MGI:109452";alleles="MGI:3045219";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.79356254A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Smad1<sup>tm2Sor</sup>";symbol_text="Smad1<tm2Sor>"
8 79356287 NC_000074.6:g.79356287A>C A C . . ANN=C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000066091.13|Coding|3/7|c.583T>G|p.(S195A)|1030/61124|583/1398|195/466||,C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000109885.7|Coding|3/6|c.583T>G|p.(S195A)|1030/57939|583/1287|195/429||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000066081.3|Noncoding|3/4|n.1030T>G||1030/44163||||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000215983.1|Noncoding|1/3|n.392T>G||392/6952||||;allele_of_genes="MGI:109452";alleles="MGI:3045219";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.79356287A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Smad1<sup>tm2Sor</sup>";symbol_text="Smad1<tm2Sor>"
8 79356311 NC_000074.6:g.79356311A>C A C . . ANN=C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000066091.13|Coding|3/7|c.559T>G|p.(S187A)|1006/61124|559/1398|187/466||,C|missense_variant|MODERATE|Smad1|17125|transcript|ENSMUST00000109885.7|Coding|3/6|c.559T>G|p.(S187A)|1006/57939|559/1287|187/429||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000066081.3|Noncoding|3/4|n.1006T>G||1006/44163||||,C|non_coding_transcript_exon_variant|LOW|Smad1|17125|transcript|ENSMUST00000215983.1|Noncoding|1/3|n.368T>G||368/6952||||;allele_of_genes="MGI:109452";alleles="MGI:3045219";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.79356311A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044540";strain_name="129S4/SvJaeSor";symbol="Smad1<sup>tm2Sor</sup>";symbol_text="Smad1<tm2Sor>"
8 82334497 NC_000074.6:g.82334497A>G A G . . ANN=G|missense_variant|MODERATE|Il15|16168|transcript|ENSMUST00000034148.6|Coding|7/8|c.350T>C|p.(L117P)|1492/71586|350/489|117/163||,G|missense_variant|MODERATE|Il15|16168|transcript|ENSMUST00000209363.1|Coding|7/8|c.350T>C|p.(L117P)|830/70939|350/489|117/163||,G|missense_variant|MODERATE|Il15|16168|transcript|ENSMUST00000209573.2|Coding|7/8|c.350T>C|p.(L117P)|748/70197|350/489|117/163||,G|3_prime_UTR_exon_variant|LOW|Il15|16168|transcript|ENSMUST00000211565.1|Coding|6/7|c.*194T>C|p.(%3D)|452/13945|187/186|63/62||,G|non_coding_transcript_exon_variant|LOW|Il15|16168|transcript|ENSMUST00000209687.1|Noncoding|4/5|n.291T>C||291/12560||||,G|non_coding_transcript_exon_variant|LOW|Il15|16168|transcript|ENSMUST00000211722.1|Noncoding|3/4|n.294T>C||294/12560||||;allele_of_genes="MGI:103014";alleles="MGI:5426268";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.82334497A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Il15<sup>m1Hwata</sup>";symbol_text="Il15<m1Hwata>"
8 84514998 NC_000074.6:g.84514998G>A G A . . ANN=A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|4/47|c.581G>A|p.(R194Q)|862/224883|581/7107|194/2369||,A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|3/46|c.440G>A|p.(R147Q)|708/224687|440/6966|147/2322||,A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|4/47|c.442G>A|p.(G148R)|442/224463|442/6965|148/2321||,A|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000135382.1|Noncoding|5/6|n.665G>A||665/130600||||;allele_of_genes="MGI:109482";alleles="MGI:3037859";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84514998G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cacna1a<sup>tm1Maag</sup>";symbol_text="Cacna1a<tm1Maag>"
8 84518608 NC_000074.6:g.84518608C>A C A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|4/46|c.638-3C>A|p.?|919/224883|638/7107|213/2369||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|3/45|c.497-3C>A|p.?|765/224687|497/6966|166/2322||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000135382.1|Noncoding|5/5|n.722-3C>A||722/130600||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|4/46|c.499-3C>A|p.?|499/224463|499/6965|167/2321||;allele_of_genes="MGI:109482";alleles="MGI:3588961";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000074.6:g.84518608C>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cacna1a<sup>tg-6J</sup>";symbol_text="Cacna1a<tg-6J>"
8 84518632 NC_000074.6:g.84518632C>T C T . . ANN=T|stop_gained|HIGH|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|5/47|c.520C>T|p.(Q174*)|520/224463|520/6965|174/2321||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|5/47|c.659C>T|p.(S220L)|940/224883|659/7107|220/2369||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|4/46|c.518C>T|p.(S173L)|786/224687|518/6966|173/2322||,T|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000135382.1|Noncoding|6/6|n.743C>T||743/130600||||;allele_of_genes="MGI:109482";alleles="MGI:3836195";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84518632C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Cacna1a<sup>tm3Maag</sup>";symbol_text="Cacna1a<tm3Maag>"
8 84549773 NC_000074.6:g.84549773T>C T C . . ANN=C|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|14/47|c.1886T>C|p.(V629A)|2167/224883|1886/7107|629/2369||,C|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|13/46|c.1745T>C|p.(V582A)|2013/224687|1745/6966|582/2322||,C|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|14/47|c.1744T>C|p.(S582P)|1744/224463|1744/6965|582/2321||,C|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000129620.1|Noncoding|4/7|n.589T>C||589/6991||||;allele_of_genes="MGI:109482";alleles="MGI:2155892";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84549773T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2165460";strain_name="C3H/HeJBir";symbol="Cacna1a<sup>tg-4J</sup>";symbol_text="Cacna1a<tg-4J>"
8 84550388 NC_000074.6:g.84550388C>T C T . . ANN=T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|15/47|c.1946C>T|p.(P649L)|2227/224883|1946/7107|649/2369||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|14/46|c.1805C>T|p.(P602L)|2073/224687|1805/6966|602/2322||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|15/47|c.1804C>T|p.(R602C)|1804/224463|1804/6965|602/2321||,T|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000129620.1|Noncoding|5/7|n.649C>T||649/6991||||;allele_of_genes="MGI:109482";alleles="MGI:1856209";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84550388C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2684695";strain_name="DBA/2J";symbol="Cacna1a<sup>tg</sup>";symbol_text="Cacna1a<tg>"
8 84579523 NC_000074.6:g.84579523G>A G A . . ANN=A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|25/47|c.3899G>A|p.(R1300Q)|4180/224883|3899/7107|1300/2369||,A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|24/46|c.3758G>A|p.(R1253Q)|4026/224687|3758/6966|1253/2322||,A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|25/47|c.3757G>A|p.(G1253R)|3757/224463|3757/6965|1253/2321||,A|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000126302.1|Noncoding|2/3|n.151G>A||151/8666||||;allele_of_genes="MGI:109482";alleles="MGI:2181625";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84579523G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2173939";strain_name="B10.M-H2<f>/nMob_Fmn1<ld-2J>/J";symbol="Cacna1a<sup>Tg-5J</sup>";symbol_text="Cacna1a<Tg-5J>"
8 84579532 NC_000074.6:g.84579532G>T G T . . ANN=T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|25/47|c.3908G>T|p.(R1303L)|4189/224883|3908/7107|1303/2369||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|24/46|c.3767G>T|p.(R1256L)|4035/224687|3767/6966|1256/2322||,T|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|25/47|c.3766G>T|p.(D1256Y)|3766/224463|3766/6965|1256/2321||,T|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000126302.1|Noncoding|2/3|n.160G>T||160/8666||||;allele_of_genes="MGI:109482";alleles="MGI:3706667";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84579532G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cacna1a<sup>Wb</sup>";symbol_text="Cacna1a<Wb>"
8 84580190 NC_000074.6:g.84580190C>A C A . . ANN=A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|26/47|c.4073C>A|p.(T1358K)|4354/224883|4073/7107|1358/2369||,A|missense_variant|MODERATE|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|25/46|c.3932C>A|p.(T1311K)|4200/224687|3932/6966|1311/2322||,A|synonymous_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|26/47|c.3931C>A|p.(%3D)|3931/224463|3931/6965|1311/2321||,A|non_coding_transcript_exon_variant|LOW|Cacna1a|12286|transcript|ENSMUST00000126302.1|Noncoding|3/3|n.325C>A||325/8666||||;allele_of_genes="MGI:109482";alleles="MGI:2154404";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.84580190C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653768";strain_name="mixed";symbol="Cacna1a<sup>rkr</sup>";symbol_text="Cacna1a<rkr>"
8 84633552 NC_000074.6:g.84633552G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cacna1a|12286|transcript|ENSMUST00000121390.7|Coding|42/46|c.6045+1G>A|p.?|6327/224883|6046/7107|2016/2369||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cacna1a|12286|transcript|ENSMUST00000122053.1|Coding|41/45|c.5904+1G>A|p.?|6173/224687|5905/6966|1969/2322||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Cacna1a|12286|transcript|ENSMUST00000144879.7|Noncoding|8/8|n.867+1G>A||868/33055||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cacna1a|12286|transcript|ENSMUST00000215756.1|Coding|42/46|c.5903+1G>A|p.?|5904/224463|5904/6965|1968/2321||;allele_of_genes="MGI:109482,MGI:109482";alleles="MGI:1856210,MGI:1856210";geneLevelConsequence="intron_variant,non_coding_transcript_variant,splice_donor_variant";hgvs_nomenclature="NC_000074.6:g.84633552G>A";impact="MODIFIER,HIGH";soTerm="point_mutation";strain_id="MGI:2159745";strain_name="AKR/J";symbol="Cacna1a<sup>tg-la</sup>";symbol_text="Cacna1a<tg-la>"
8 104142697 NC_000074.6:g.104142697_104142697delinsTTC A TTC . . ANN=TTC|frameshift_elongation&complex_substitution|HIGH|Cdh5|12562|transcript|ENSMUST00000034339.9|Coding|12/12|c.2054delAinsTTC|p.(Y685Ffs*25)|2181/42887|2054/2355|685/785||;allele_of_genes="MGI:105057";alleles="MGI:5647997";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000074.6:g.104142697_104142697delinsTTC";impact="HIGH";soTerm="MNV";strain_id="MGI:2160041";strain_name="129";symbol="Cdh5<sup>tm1.1Ics</sup>";symbol_text="Cdh5<tm1.1Ics>"
8 105912712 NC_000074.6:g.105912712T>A T A . . ANN=A|missense_variant|MODERATE|Pskh1|244631|transcript|ENSMUST00000049699.8|Coding|2/3|c.23T>A|p.(V8D)|193/31338|23/1275|8/425||;allele_of_genes="MGI:3528383";alleles="MGI:5792080";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.105912712T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pskh1<sup>mpc232H</sup>";symbol_text="Pskh1<mpc232H>"
8 105913345 NC_000074.6:g.105913345T>C T C . . ANN=C|missense_variant|MODERATE|Pskh1|244631|transcript|ENSMUST00000049699.8|Coding|2/3|c.656T>C|p.(L219P)|826/31338|656/1275|219/425||;allele_of_genes="MGI:3528383";alleles="MGI:5311390";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.105913345T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pskh1<sup>b2b1230Clo</sup>";symbol_text="Pskh1<b2b1230Clo>"
8 108948206 NC_000074.6:g.108948206G>T G T . . ANN=T|missense_variant|MODERATE|Zfhx3|11906|transcript|ENSMUST00000043896.9|Coding|9/10|c.5887G>T|p.(V1963F)|6620/246987|5887/11172|1963/3724||,T|missense_variant|MODERATE|Zfhx3|11906|transcript|ENSMUST00000220518.1|Coding|15/16|c.5887G>T|p.(V1963F)|7339/1018987|5887/11172|1963/3724||;allele_of_genes="MGI:99948";alleles="MGI:2679554";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.108948206G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3047778";strain_name="BALB/cOlaHsd";symbol="Zfhx3<sup>Sci</sup>";symbol_text="Zfhx3<Sci>"
8 111312100 NC_000074.6:g.111312100T>C T C . . ANN=C|coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000056157.13|Coding|10/10|c.1367-23A>G|p.(%3D)|1723/26381|1367/1419|456/473||,C|coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000120432.2|Coding|10/10|c.1343-23A>G|p.(%3D)|1699/26378|1343/1395|448/465||,C|non_coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000135710.1|Noncoding|3/3|n.404-23A>G||404/4318||||;allele_of_genes="MGI:1921818";alleles="MGI:5695009";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000074.6:g.111312100T>C";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mlkl<sup>m1Btlr</sup>";symbol_text="Mlkl<m1Btlr>"
8 111315567 NC_000074.6:g.111315567A>G A G . . ANN=G|coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000056157.13|Coding|8/10|c.1152-25T>C|p.(%3D)|1508/26381|1152/1419|384/473||,G|coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000120432.2|Coding|8/10|c.1152-25T>C|p.(%3D)|1508/26378|1152/1395|384/465||,G|non_coding_transcript_intron_variant|LOW|Mlkl|74568|transcript|ENSMUST00000135710.1|Noncoding|1/3|n.213-25T>C||213/4318||||;allele_of_genes="MGI:1921818";alleles="MGI:5789564";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000074.6:g.111315567A>G";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mlkl<sup>m2Btlr</sup>";symbol_text="Mlkl<m2Btlr>"
8 111319716 NC_000074.6:g.111319716C>G C G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Mlkl|74568|transcript|ENSMUST00000056157.13|Coding|6/10|c.923+1G>C|p.?|1280/26381|924/1419|308/473||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Mlkl|74568|transcript|ENSMUST00000120432.2|Coding|6/10|c.923+1G>C|p.?|1280/26378|924/1395|308/465||;allele_of_genes="MGI:1921818";alleles="MGI:5789563";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000074.6:g.111319716C>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mlkl<sup>m3Btlr</sup>";symbol_text="Mlkl<m3Btlr>"
8 119538137 NC_000074.6:g.119538137G>T G T . . ANN=T|missense_variant|MODERATE|Mbtps1|56453|transcript|ENSMUST00000081381.5|Coding|8/23|c.1021C>A|p.(P341T)|1434/50580|1021/3159|341/1053||,T|missense_variant|MODERATE|Mbtps1|56453|transcript|ENSMUST00000098362.10|Coding|9/24|c.1021C>A|p.(P341T)|1575/50572|1021/3159|341/1053||,T|non_coding_transcript_exon_variant|LOW|Mbtps1|56453|transcript|ENSMUST00000212244.1|Noncoding|2/2|n.181C>A||181/1056||||,T|non_coding_transcript_exon_variant|LOW|Mbtps1|56453|transcript|ENSMUST00000212601.1|Noncoding|7/22|n.4028C>A||4028/50550||||,T|non_coding_transcript_exon_variant|LOW|Mbtps1|56453|transcript|ENSMUST00000212685.1|Noncoding|8/22|n.1434C>A||1434/50580||||;allele_of_genes="MGI:1927235";alleles="MGI:6304283";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.119538137G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mbtps1<sup>m2Btlr</sup>";symbol_text="Mbtps1<m2Btlr>"
8 120753707 NC_000074.6:g.120753707T>C T C . . ANN=C|missense_variant|MODERATE|Irf8|15900|transcript|ENSMUST00000047737.9|Coding|7/9|c.956T>C|p.(V319A)|1009/20337|956/1275|319/425||,C|missense_variant|MODERATE|Irf8|15900|transcript|ENSMUST00000160943.2|Coding|5/7|c.683T>C|p.(V228A)|736/19047|683/1002|228/334||,C|missense_variant|MODERATE|Irf8|15900|transcript|ENSMUST00000162001.7|Coding|7/9|c.956T>C|p.(V319A)|1545/16943|956/1275|319/425||,C|coding_transcript_intron_variant|LOW|Gm20388|108148|transcript|ENSMUST00000127664.1|Coding|1/15|c.21+842768T>C|p.(%3D)|100/4434882|22/1611|8/537||,C|non_coding_transcript_exon_variant|LOW|Irf8|15900|transcript|ENSMUST00000160388.1|Noncoding|4/4|n.738T>C||738/8254||||,C|non_coding_transcript_exon_variant|LOW|Irf8|15900|transcript|ENSMUST00000160594.1|Noncoding|2/2|n.592T>C||592/1503||||;allele_of_genes="MGI:96395,MGI:96395";alleles="MGI:6305310,MGI:6305310";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000074.6:g.120753707T>C";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf8<sup>m2Btlr</sup>";symbol_text="Irf8<m2Btlr>"
8 123421113 NC_000074.6:g.123421113C>T C T . . ANN=T|missense_variant|MODERATE|Tubb3|22152|transcript|ENSMUST00000071134.3|Coding|4/4|c.784C>T|p.(R262C)|966/10592|784/1353|262/451||,T|coding_transcript_intron_variant|LOW|Gm20388|108148|transcript|ENSMUST00000127664.1|Coding|1/15|c.22-874245C>T|p.(%3D)|100/4434882|22/1611|8/537||;allele_of_genes="MGI:107813,MGI:107813";alleles="MGI:4441058,MGI:4441058";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000074.6:g.123421113C>T";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3050593";strain_name="129S/SvEv";symbol="Tubb3<sup>tm1.1Ece</sup>";symbol_text="Tubb3<tm1.1Ece>"
8 128434283 NC_000074.6:g.128434283_128434285delinsGCT TA GC . . ANN=GC|mnv|HIGH|Nrp1|18186|transcript|ENSMUST00000026917.9|Coding|6/17|c.889_890delTAinsGC|p.(Y297A)|1165/144080|889/2772|297/924||,GC|non_coding_transcript_exon_variant|LOW|Nrp1|18186|transcript|ENSMUST00000212933.1|Noncoding|6/8|n.1052_1053delTAinsGC||1052/102685||||;allele_of_genes="MGI:106206";alleles="MGI:5588167";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000074.6:g.128434283_128434285delinsGCT";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Nrp1<sup>tm1.1Izac</sup>";symbol_text="Nrp1<tm1.1Izac>"
8 128502694 NC_000074.6:g.128502694_128502696delinsAATT GCA AATT . . ANN=AATT|frameshift_variant&complex_substitution|HIGH|Nrp1|18186|transcript|ENSMUST00000026917.9|Coding|17/17|c.2652_2654delGCAinsAATT|p.(W884fs)|2928/144080|2652/2772|884/924||;allele_of_genes="MGI:106206";alleles="MGI:5288597";geneLevelConsequence="stop_gained,frameshift_variant";hgvs_nomenclature="NC_000074.6:g.128502694_128502696delinsAATT";impact="HIGH";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Nrp1<sup>tm1.1Cruh</sup>";symbol_text="Nrp1<tm1.1Cruh>"
9 6996917 NC_000075.6:g.6996917A>G A G . . ANN=G|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000048417.12|Coding|80/89|c.11669T>C|p.(F3890S)|11758/248544|11669/12921|3890/4307||,G|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000140466.7|Coding|81/90|c.11669T>C|p.(F3890S)|12050/255944|11669/12921|3890/4307||,G|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000147193.7|Coding|81/90|c.11690T>C|p.(F3897S)|11690/247654|11690/12942|3897/4314||;allele_of_genes="MGI:107736";alleles="MGI:3578144";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.6996917A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dync2h1<sup>lln</sup>";symbol_text="Dync2h1<lln>"
9 7170927 NC_000075.6:g.7170927A>T A T . . ANN=T|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000048417.12|Coding|5/89|c.701T>A|p.(V234E)|790/248544|701/12921|234/4307||,T|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000139115.1|Coding|5/19|c.701T>A|p.(V234E)|709/27491|701/2751|234/917||,T|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000140466.7|Coding|6/90|c.701T>A|p.(V234E)|1082/255944|701/12921|234/4307||,T|missense_variant|MODERATE|Dync2h1|110350|transcript|ENSMUST00000147193.7|Coding|5/90|c.701T>A|p.(V234E)|701/247654|701/12942|234/4314||,T|non_coding_transcript_exon_variant|LOW|Dync2h1|110350|transcript|ENSMUST00000147056.1|Noncoding|5/22|n.788T>A||788/34331||||;allele_of_genes="MGI:107736";alleles="MGI:5311370";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.7170927A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dync2h1<sup>b2b414Clo</sup>";symbol_text="Dync2h1<b2b414Clo>"
9 8001650 NC_000075.6:g.8001650A>C A C . . ANN=C|missense_variant|MODERATE|Yap1|22601|transcript|ENSMUST00000065353.12|Coding|2/9|c.334T>G|p.(S112A)|540/72598|334/1467|112/489||,C|missense_variant|MODERATE|Yap1|22601|transcript|ENSMUST00000086580.11|Coding|2/8|c.334T>G|p.(S112A)|532/72590|334/1419|112/473||,C|missense_variant|MODERATE|Yap1|22601|transcript|ENSMUST00000173085.7|Coding|2/9|c.334T>G|p.(S112A)|334/69894|334/1062|112/354||,C|missense_variant|MODERATE|Yap1|22601|transcript|ENSMUST00000173264.7|Coding|2/10|c.334T>G|p.(S112A)|334/69894|334/1110|112/370||,C|missense_variant|MODERATE|Yap1|22601|transcript|ENSMUST00000174577.1|Coding|2/9|c.334T>G|p.(S112A)|334/69894|334/1074|112/358||,C|synonymous_variant|LOW|Yap1|22601|transcript|ENSMUST00000174604.7|Coding|1/8|c.54T>G|p.(%3D)|54/67207|54/1193|18/397||,C|non_coding_transcript_exon_variant|LOW|Yap1|22601|transcript|ENSMUST00000172870.1|Noncoding|2/3|n.186T>G||186/29938||||,C|non_coding_transcript_exon_variant|LOW|Yap1|22601|transcript|ENSMUST00000173227.7|Noncoding|2/3|n.365T>G||365/29962||||,C|non_coding_transcript_exon_variant|LOW|Yap1|22601|transcript|ENSMUST00000174300.1|Noncoding|2/2|n.540T>G||540/7689||||;allele_of_genes="MGI:103262";alleles="MGI:5660284";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.8001650A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Yap1<sup>tm2.1Dupa</sup>";symbol_text="Yap1<tm2.1Dupa>"
9 8004154 NC_000075.6:g.8004154_8004156delinsCGC GGA CGC . . ANN=CGC|mnv|HIGH|Yap1|22601|transcript|ENSMUST00000065353.12|Coding|1/9|c.235_237delTCCinsGCG|p.(S79A)|441/72598|235/1467|79/489||,CGC|mnv|HIGH|Yap1|22601|transcript|ENSMUST00000086580.11|Coding|1/8|c.235_237delTCCinsGCG|p.(S79A)|433/72590|235/1419|79/473||,CGC|mnv|HIGH|Yap1|22601|transcript|ENSMUST00000173085.7|Coding|1/9|c.235_237delTCCinsGCG|p.(S79A)|235/69894|235/1062|79/354||,CGC|mnv|HIGH|Yap1|22601|transcript|ENSMUST00000173264.7|Coding|1/10|c.235_237delTCCinsGCG|p.(S79A)|235/69894|235/1110|79/370||,CGC|mnv|HIGH|Yap1|22601|transcript|ENSMUST00000174577.1|Coding|1/9|c.235_237delTCCinsGCG|p.(S79A)|235/69894|235/1074|79/358||,CGC|non_coding_transcript_exon_variant|LOW|Yap1|22601|transcript|ENSMUST00000174300.1|Noncoding|1/2|n.441_443delTCCinsGCG||441/7689||||;allele_of_genes="MGI:103262";alleles="MGI:5316452";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.8004154_8004156delinsCGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5654680";strain_name="(C57BL/6_x_129S4/SvJae)F1";symbol="Yap1<sup>tm2.1Fcam</sup>";symbol_text="Yap1<tm2.1Fcam>"
9 14795841 NC_000075.6:g.14795841C>A C A . . ANN=A|missense_variant|MODERATE|Mre11a|17535|transcript|ENSMUST00000034405.10|Coding|5/20|c.385C>A|p.(H129N)|567/49993|385/2121|129/707||,A|missense_variant|MODERATE|Mre11a|17535|transcript|ENSMUST00000115632.9|Coding|5/19|c.385C>A|p.(H129N)|545/52448|385/2040|129/680||,A|missense_variant|MODERATE|Mre11a|17535|transcript|ENSMUST00000147305.1|Coding|5/7|c.385C>A|p.(H129N)|569/14919|385/609|129/203||;allele_of_genes="MGI:1100512";alleles="MGI:3839938";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.14795841C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Mre11a<sup>tm1Dof</sup>";symbol_text="Mre11a<tm1Dof>"
9 15076948 NC_000075.6:g.15076948T>G T G . . ANN=G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Hephl1|244698|transcript|ENSMUST00000159985.1|Coding|10/19|c.1865-2A>C|p.?|1869/60268|1865/3480|622/1160||;allele_of_genes="MGI:2685355,MGI:2685355";alleles="MGI:1856476,MGI:1856476";geneLevelConsequence="splice_acceptor_variant,splice_acceptor_variant";hgvs_nomenclature="NC_000075.6:g.15076948T>G";impact="HIGH,HIGH";soTerm="point_mutation";strain_id="MGI:2161540";strain_name="CBA/Cbi";symbol="Hephl1<sup>cw</sup>";symbol_text="Hephl1<cw>"
9 21478354 NC_000075.6:g.21478354T>A T A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000072362.13|Coding|9/20|c.1196+6T>A|p.?|1348/82196|1197/2613|399/871||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000091087.12|Coding|9/19|c.1196+6T>A|p.?|1322/82156|1197/2601|399/867||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000115404.10|Coding|9/20|c.1196+6T>A|p.?|1317/82149|1197/2613|399/871||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000165766.8|Coding|9/20|c.1196+6T>A|p.?|1385/82847|1197/2583|399/861||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000169194.8|Noncoding|9/14|n.1049+6T>A||1050/66184||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000172482.7|Coding|9/20|c.1196+6T>A|p.?|1197/81307|1197/2613|399/871||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000172833.1|Coding|2/9|c.183+6T>A|p.?|184/22820|184/744|62/248||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000173397.7|Coding|9/20|c.1196+6T>A|p.?|1361/82207|1197/2610|399/870||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dnm2|13430|transcript|ENSMUST00000174050.7|Coding|9/19|c.1048+6T>A|p.?|1049/82511|1049/2423|350/807||;allele_of_genes="MGI:109547";alleles="MGI:5491244";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000075.6:g.21478354T>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnm2<sup>b2b2159Clo</sup>";symbol_text="Dnm2<b2b2159Clo>"
9 21481390 NC_000075.6:g.21481390A>T A T . . ANN=T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000072362.13|Coding|11/21|c.1393A>T|p.(R465W)|1544/82196|1393/2613|465/871||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000091087.12|Coding|11/20|c.1393A>T|p.(R465W)|1518/82156|1393/2601|465/867||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000115404.10|Coding|11/21|c.1393A>T|p.(R465W)|1513/82149|1393/2613|465/871||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000165766.8|Coding|11/21|c.1393A>T|p.(R465W)|1581/82847|1393/2583|465/861||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000172482.7|Coding|11/21|c.1393A>T|p.(R465W)|1393/81307|1393/2613|465/871||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000172833.1|Coding|4/10|c.380A>T|p.(Q127L)|380/22820|380/744|127/248||,T|missense_variant|MODERATE|Dnm2|13430|transcript|ENSMUST00000173397.7|Coding|11/21|c.1393A>T|p.(R465W)|1557/82207|1393/2610|465/870||,T|synonymous_variant|LOW|Dnm2|13430|transcript|ENSMUST00000174050.7|Coding|11/20|c.1245A>T|p.(%3D)|1245/82511|1245/2423|415/807||,T|non_coding_transcript_exon_variant|LOW|Dnm2|13430|transcript|ENSMUST00000169194.8|Noncoding|11/15|n.1246A>T||1246/66184||||,T|non_coding_transcript_exon_variant|LOW|Dnm2|13430|transcript|ENSMUST00000172763.7|Noncoding|2/12|n.285A>T||285/27441||||;allele_of_genes="MGI:109547";alleles="MGI:4848043";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.21481390A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Dnm2<sup>tm1.1Ics</sup>";symbol_text="Dnm2<tm1.1Ics>"
9 21639221 NC_000075.6:g.21639221C>T C T . . ANN=T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000034707.14|Coding|8/34|c.1249C>T|p.(R417C)|1509/88049|1249/4845|417/1615||,T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000098948.9|Coding|8/34|c.1249C>T|p.(R417C)|1509/88062|1249/4854|417/1618||,T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000174008.7|Coding|8/34|c.1249C>T|p.(R417C)|1414/87103|1249/4842|417/1614||,T|synonymous_variant|LOW|Smarca4|20586|transcript|ENSMUST00000172996.1|Coding|5/27|c.663C>T|p.(%3D)|663/50462|663/3800|221/1266||;allele_of_genes="MGI:88192";alleles="MGI:5316781";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.21639221C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Smarca4<sup>b2b692Clo</sup>";symbol_text="Smarca4<b2b692Clo>"
9 21660814 NC_000075.6:g.21660814C>T C T . . ANN=T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000034707.14|Coding|16/34|c.2381C>T|p.(T794I)|2641/88049|2381/4845|794/1615||,T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000098948.9|Coding|16/34|c.2381C>T|p.(T794I)|2641/88062|2381/4854|794/1618||,T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000172996.1|Coding|13/27|c.1795C>T|p.(H599Y)|1795/50462|1795/3800|599/1266||,T|missense_variant|MODERATE|Smarca4|20586|transcript|ENSMUST00000174008.7|Coding|16/34|c.2381C>T|p.(T794I)|2546/87103|2381/4842|794/1614||;allele_of_genes="MGI:88192";alleles="MGI:5313991";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.21660814C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Smarca4<sup>b2b508.1Clo</sup>";symbol_text="Smarca4<b2b508.1Clo>"
9 21994811 NC_000075.6:g.21994811A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ccdc151|77609|transcript|ENSMUST00000044926.5|Coding|6/12|c.828+2T>C|p.?|989/12764|829/1782|277/594||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ccdc151|77609|transcript|ENSMUST00000115336.9|Coding|6/12|c.828+2T>C|p.?|892/12667|829/1785|277/595||;allele_of_genes="MGI:1924859";alleles="MGI:5445347";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000075.6:g.21994811A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ccdc151<sup>b2b1885Clo</sup>";symbol_text="Ccdc151<b2b1885Clo>"
9 22074703 NC_000075.6:g.22074703T>A T A . . ANN=A|missense_variant|MODERATE|Ecsit|26940|transcript|ENSMUST00000098937.9|Coding|5/9|c.626A>T|p.(N209I)|913/13182|626/1308|209/436||,A|missense_variant|MODERATE|Ecsit|26940|transcript|ENSMUST00000177967.1|Coding|3/5|c.416A>T|p.(N139I)|609/11936|416/669|139/223||,A|missense_variant|MODERATE|Ecsit|26940|transcript|ENSMUST00000179422.7|Coding|4/8|c.626A>T|p.(N209I)|702/13157|626/1308|209/436||,A|missense_variant|MODERATE|Ecsit|26940|transcript|ENSMUST00000180180.7|Coding|5/9|c.626A>T|p.(N209I)|916/13193|626/1308|209/436||,A|non_coding_transcript_intron_variant|LOW|Gm16845|100503652|transcript|ENSMUST00000180419.1|Noncoding|1/2|n.134-1547T>A||134/15091||||,A|non_coding_transcript_intron_variant|LOW|Gm16845|100503652|transcript|ENSMUST00000216270.1|Noncoding|1/3|n.164-1317T>A||164/14179||||;allele_of_genes="MGI:1349469,MGI:1349469";alleles="MGI:5503987,MGI:5503987";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000075.6:g.22074703T>A";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ecsit<sup>mpc178H</sup>";symbol_text="Ecsit<mpc178H>"
9 35187932 NC_000075.6:g.35187932T>A T A . . ANN=A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Tirap|117149|transcript|ENSMUST00000175765.7|Coding|6/6|c.731-2A>T|p.?|1210/15741|731/750|244/250||,A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Tirap|117149|transcript|ENSMUST00000176531.7|Coding|6/6|c.731-2A>T|p.?|1165/13144|731/750|244/250||,A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Tirap|117149|transcript|ENSMUST00000176685.7|Coding|6/6|c.731-2A>T|p.?|1197/12627|731/750|244/250||,A|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Tirap|117149|transcript|ENSMUST00000177129.7|Coding|6/6|c.731-2A>T|p.?|1221/13204|731/750|244/250||;allele_of_genes="MGI:2152213";alleles="MGI:3774113";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000075.6:g.35187932T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tirap<sup>m1Btlr</sup>";symbol_text="Tirap<m1Btlr>"
9 42258577 NC_000075.6:g.42258577T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Sc5d|235293|transcript|ENSMUST00000052725.14|Coding|4/5|c.343+4A>G|p.?|484/12662|344/900|115/300||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Sc5d|235293|transcript|ENSMUST00000169609.1|Coding|4/5|c.343+4A>G|p.?|512/9468|344/900|115/300||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Sc5d|235293|transcript|ENSMUST00000217513.1|Coding|3/4|c.343+4A>G|p.?|402/8659|344/645|115/215||;allele_of_genes="MGI:1353611";alleles="MGI:5648222";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000075.6:g.42258577T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sc5d<sup>b2b3462Clo</sup>";symbol_text="Sc5d<b2b3462Clo>"
9 42338986 NC_000075.6:g.42338986A>C A C . . ANN=C|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000042190.13|Coding|18/24|c.5509T>G|p.(C1837G)|5776/70308|5509/6468|1837/2156||,C|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000160940.1|Coding|18/24|c.5494T>G|p.(C1832G)|5559/70033|5494/6453|1832/2151||,C|non_coding_transcript_exon_variant|LOW|Tecta|21683|transcript|ENSMUST00000159603.1|Noncoding|3/9|n.600T>G||600/14376||||;allele_of_genes="MGI:109575";alleles="MGI:5527096";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.42338986A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Tecta<sup>tm5.1Gpr</sup>";symbol_text="Tecta<tm5.1Gpr>"
9 42339024 NC_000075.6:g.42339024C>T C T . . ANN=T|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000042190.13|Coding|18/24|c.5471G>A|p.(G1824D)|5738/70308|5471/6468|1824/2156||,T|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000160940.1|Coding|18/24|c.5456G>A|p.(G1819D)|5521/70033|5456/6453|1819/2151||,T|non_coding_transcript_exon_variant|LOW|Tecta|21683|transcript|ENSMUST00000159603.1|Noncoding|3/9|n.562G>A||562/14376||||;allele_of_genes="MGI:109575";alleles="MGI:5527095";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.42339024C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Tecta<sup>tm4.1Gpr</sup>";symbol_text="Tecta<tm4.1Gpr>"
9 42339037 NC_000075.6:g.42339037G>A G A . . ANN=A|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000042190.13|Coding|18/24|c.5458C>T|p.(L1820F)|5725/70308|5458/6468|1820/2156||,A|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000160940.1|Coding|18/24|c.5443C>T|p.(L1815F)|5508/70033|5443/6453|1815/2151||,A|non_coding_transcript_exon_variant|LOW|Tecta|21683|transcript|ENSMUST00000159603.1|Noncoding|3/9|n.549C>T||549/14376||||;allele_of_genes="MGI:109575";alleles="MGI:5527095";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.42339037G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Tecta<sup>tm4.1Gpr</sup>";symbol_text="Tecta<tm4.1Gpr>"
9 42345523 NC_000075.6:g.42345523C>G C G . . ANN=G|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000042190.13|Coding|15/24|c.4856G>C|p.(C1619S)|5123/70308|4856/6468|1619/2156||,G|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000160940.1|Coding|15/24|c.4856G>C|p.(C1619S)|4921/70033|4856/6453|1619/2151||;allele_of_genes="MGI:109575";alleles="MGI:5527094";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.42345523C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Tecta<sup>tm3.1Gpr</sup>";symbol_text="Tecta<tm3.1Gpr>"
9 42348061 NC_000075.6:g.42348061A>C A C . . ANN=C|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000042190.13|Coding|14/24|c.4525T>G|p.(C1509G)|4792/70308|4525/6468|1509/2156||,C|missense_variant|MODERATE|Tecta|21683|transcript|ENSMUST00000160940.1|Coding|14/24|c.4525T>G|p.(C1509G)|4590/70033|4525/6453|1509/2151||;allele_of_genes="MGI:109575";alleles="MGI:4458424";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.42348061A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164544";strain_name="129S7/SvEvBrd-Hprt<b-m2>";symbol="Tecta<sup>tm1.1Ogha</sup>";symbol_text="Tecta<tm1.1Ogha>"
9 44750394 NC_000075.6:g.44750394A>C A C . . ANN=C|missense_variant|MODERATE|Arcn1|213827|transcript|ENSMUST00000034607.9|Coding|8/10|c.1172T>G|p.(V391G)|1345/26282|1172/1536|391/512||,C|non_coding_transcript_exon_variant|LOW|Arcn1|.|transcript|ENSMUST00000217194.1|Noncoding|1/1|n.115T>G||115/2616||||;allele_of_genes="MGI:2387591";alleles="MGI:6304924";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.44750394A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Arcn1<sup>m1Btlr</sup>";symbol_text="Arcn1<m1Btlr>"
9 48832311 NC_000075.6:g.48832311G>A G A . . ANN=A|stop_gained|HIGH|Zbtb16|235320|transcript|ENSMUST00000093852.4|Coding|2/7|c.700C>T|p.(R234*)|947/181649|700/2022|234/674||,A|stop_gained|HIGH|Zbtb16|235320|transcript|ENSMUST00000216150.1|Coding|2/7|c.700C>T|p.(R234*)|958/179306|700/2022|234/674||;allele_of_genes="MGI:103222";alleles="MGI:1856943";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000075.6:g.48832311G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159866";strain_name="C3H/He";symbol="Zbtb16<sup>lu</sup>";symbol_text="Zbtb16<lu>"
9 48832801 NC_000075.6:g.48832801A>T A T . . ANN=T|stop_gained|HIGH|Zbtb16|235320|transcript|ENSMUST00000093852.4|Coding|2/7|c.210T>A|p.(Y70*)|457/181649|210/2022|70/674||,T|stop_gained|HIGH|Zbtb16|235320|transcript|ENSMUST00000216150.1|Coding|2/7|c.210T>A|p.(Y70*)|468/179306|210/2022|70/674||;allele_of_genes="MGI:103222";alleles="MGI:4462277";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000075.6:g.48832801A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4818407";strain_name="CBA/CaJAnu";symbol="Zbtb16<sup>pnky</sup>";symbol_text="Zbtb16<pnky>"
9 48832880 NC_000075.6:g.48832880T>C T C . . ANN=C|missense_variant|MODERATE|Zbtb16|235320|transcript|ENSMUST00000093852.4|Coding|2/7|c.131A>G|p.(E44G)|378/181649|131/2022|44/674||,C|missense_variant|MODERATE|Zbtb16|235320|transcript|ENSMUST00000216150.1|Coding|2/7|c.131A>G|p.(E44G)|389/179306|131/2022|44/674||;allele_of_genes="MGI:103222";alleles="MGI:4457499";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.48832880T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zbtb16<sup>7t</sup>";symbol_text="Zbtb16<7t>"
9 53444038 NC_000075.6:g.53444038A>T A T . . ANN=T|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000118282.8|Coding|58/62|c.8646T>A|p.(N2882K)|8676/94818|8646/9192|2882/3064||,T|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000232179.1|Coding|60/64|c.8655T>A|p.(N2885K)|8863/97373|8655/9201|2885/3067||;allele_of_genes="MGI:107202,MGI:107202,MGI:107202,MGI:107202";alleles="MGI:5463796,MGI:5463796,MGI:5463796,MGI:5463796";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.53444038A>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atm<sup>tm1Shzh</sup>";symbol_text="Atm<tm1Shzh>"
9 53444038 NC_000075.6:g.53444038A>T A T . . ANN=T|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000118282.8|Coding|58/62|c.8646T>A|p.(N2882K)|8676/94818|8646/9192|2882/3064||,T|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000232179.1|Coding|60/64|c.8655T>A|p.(N2885K)|8863/97373|8655/9201|2885/3067||;allele_of_genes="MGI:107202,MGI:107202,MGI:107202,MGI:107202";alleles="MGI:5463773,MGI:5463773,MGI:5463773,MGI:5463773";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.53444038A>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atm<sup>tm1.1Shzh</sup>";symbol_text="Atm<tm1.1Shzh>"
9 53444054 NC_000075.6:g.53444054T>G T G . . ANN=G|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000118282.8|Coding|58/62|c.8630A>C|p.(D2877A)|8660/94818|8630/9192|2877/3064||,G|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000232179.1|Coding|60/64|c.8639A>C|p.(D2880A)|8847/97373|8639/9201|2880/3067||;allele_of_genes="MGI:107202,MGI:107202,MGI:107202,MGI:107202";alleles="MGI:5463796,MGI:5463796,MGI:5463796,MGI:5463796";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.53444054T>G";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atm<sup>tm1Shzh</sup>";symbol_text="Atm<tm1Shzh>"
9 53444054 NC_000075.6:g.53444054T>G T G . . ANN=G|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000118282.8|Coding|58/62|c.8630A>C|p.(D2877A)|8660/94818|8630/9192|2877/3064||,G|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000232179.1|Coding|60/64|c.8639A>C|p.(D2880A)|8847/97373|8639/9201|2880/3067||;allele_of_genes="MGI:107202,MGI:107202,MGI:107202,MGI:107202";alleles="MGI:5463773,MGI:5463773,MGI:5463773,MGI:5463773";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.53444054T>G";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atm<sup>tm1.1Shzh</sup>";symbol_text="Atm<tm1.1Shzh>"
9 53454431 NC_000075.6:g.53454432_53454441del GAAATCCTAGA G . . ANN=G|frameshift_truncation|HIGH|Atm|11920|transcript|ENSMUST00000118282.8|Coding|51/62|c.7657_7666del|p.(S2553Hfs*15)|7687/94818|7657/9192|2553/3064||,G|frameshift_truncation|HIGH|Atm|11920|transcript|ENSMUST00000232179.1|Coding|53/64|c.7666_7675del|p.(S2556Hfs*15)|7874/97373|7666/9201|2556/3067||;allele_of_genes="MGI:107202";alleles="MGI:2181756";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000075.6:g.53454432_53454441del";impact="HIGH";soTerm="deletion";strain_id="MGI:2165018";strain_name="129T2/SvEms";symbol="Atm<sup>tm1Mfl</sup>";symbol_text="Atm<tm1Mfl>"
9 53518559 NC_000075.6:g.53518559C>A C A . . ANN=A|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000118282.8|Coding|8/62|c.1176G>T|p.(W392C)|1206/94818|1176/9192|392/3064||,A|missense_variant|MODERATE|Atm|11920|transcript|ENSMUST00000232179.1|Coding|9/64|c.1176G>T|p.(W392C)|1384/97373|1176/9201|392/3067||;allele_of_genes="MGI:107202";alleles="MGI:6305816";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.53518559C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atm<sup>m6Btlr</sup>";symbol_text="Atm<m6Btlr>"
9 54598466 NC_000075.6:g.54598466G>A G A . . ANN=A|missense_variant|MODERATE|Idh3a|67834|transcript|ENSMUST00000167866.1|Coding|7/11|c.685G>A|p.(E229K)|691/18151|685/1101|229/367||,A|missense_variant|MODERATE|Idh3a|67834|transcript|ENSMUST00000217484.1|Coding|7/11|c.739G>A|p.(E247K)|868/18328|739/1155|247/385||,A|3_prime_UTR_exon_variant|LOW|Idh3a|67834|transcript|ENSMUST00000215273.1|Coding|8/12|c.*666G>A|p.(%3D)|816/17465|115/114|39/38||,A|non_coding_transcript_exon_variant|LOW|Idh3a|67834|transcript|ENSMUST00000214136.1|Noncoding|4/8|n.583G>A||583/8843||||;allele_of_genes="MGI:1915084";alleles="MGI:5792025";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.54598466G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Idh3a<sup>mpc201H</sup>";symbol_text="Idh3a<mpc201H>"
9 58627882 NC_000075.6:g.58627882T>A T A . . ANN=A|stop_gained|HIGH|Nptn|20320|transcript|ENSMUST00000085651.11|Coding|3/8|c.309T>A|p.(Y103*)|453/70587|309/846|103/282||,A|stop_gained|HIGH|Nptn|20320|transcript|ENSMUST00000114121.10|Coding|3/7|c.309T>A|p.(Y103*)|338/68912|309/834|103/278||,A|stop_gained|HIGH|Nptn|20320|transcript|ENSMUST00000176557.7|Coding|3/8|c.309T>A|p.(Y103*)|339/70473|309/834|103/278||,A|stop_gained|HIGH|Nptn|20320|transcript|ENSMUST00000177292.7|Coding|4/8|c.657T>A|p.(Y219*)|853/69079|657/1194|219/398||,A|stop_gained|HIGH|Nptn|20320|transcript|ENSMUST00000177380.7|Coding|3/4|c.309T>A|p.(Y103*)|371/58307|309/367|103/122||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000175945.6|Coding|2/4|c.140T>A|p.(I47N)|169/61400|140/183|47/61||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000176896.7|Coding|3/8|c.304T>A|p.(S102T)|304/69522|304/664|102/221||,A|coding_transcript_intron_variant|LOW|Nptn|20320|transcript|ENSMUST00000177064.7|Coding|1/4|c.92-12787T>A|p.(%3D)|92/68883|92/582|31/194||,A|non_coding_transcript_exon_variant|LOW|Nptn|20320|transcript|ENSMUST00000176126.1|Noncoding|3/4|n.301T>A||301/61225||||;allele_of_genes="MGI:108077";alleles="MGI:5911041";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000075.6:g.58627882T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5655836";strain_name="(C3H/HeH_x_BALB/c)F1";symbol="Nptn<sup>Y219X</sup>";symbol_text="Nptn<Y219X>"
9 58643634 NC_000075.6:g.58643634T>A T A . . ANN=A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000085651.11|Coding|5/8|c.595T>A|p.(C199S)|739/70587|595/846|199/282||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000114121.10|Coding|5/7|c.595T>A|p.(C199S)|624/68912|595/834|199/278||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000176250.1|Coding|3/5|c.265T>A|p.(C89S)|390/26103|265/516|89/172||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000176557.7|Coding|5/8|c.595T>A|p.(C199S)|625/70473|595/834|199/278||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000176896.7|Coding|5/8|c.590T>A|p.(M197K)|590/69522|590/664|197/221||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000176916.7|Coding|3/9|c.265T>A|p.(C89S)|391/28851|265/516|89/172||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000177064.7|Coding|3/5|c.331T>A|p.(C111S)|331/68883|331/582|111/194||,A|missense_variant|MODERATE|Nptn|20320|transcript|ENSMUST00000177292.7|Coding|6/8|c.943T>A|p.(C315S)|1139/69079|943/1194|315/398||,A|3_prime_UTR_exon_variant|LOW|Nptn|20320|transcript|ENSMUST00000175945.6|Coding|4/4|c.*243T>A|p.(%3D)|455/61400|184/183|62/61||,A|non_coding_transcript_exon_variant|LOW|Nptn|20320|transcript|ENSMUST00000176126.1|Noncoding|4/4|n.453T>A||453/61225||||;allele_of_genes="MGI:108077";alleles="MGI:5911043";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.58643634T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nptn<sup>pitch</sup>";symbol_text="Nptn<pitch>"
9 63954030 NC_000075.6:g.63954030T>A T A . . ANN=A|stop_gained|HIGH|Smad6|17130|transcript|ENSMUST00000041029.5|Coding|4/4|c.982A>T|p.(K328*)|2017/68984|982/1488|328/496||,A|non_coding_transcript_exon_variant|LOW|Smad6|17130|transcript|ENSMUST00000144323.2|Noncoding|5/5|n.396A>T||396/62979||||;allele_of_genes="MGI:1336883";alleles="MGI:5316777";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000075.6:g.63954030T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Smad6<sup>b2b390Clo</sup>";symbol_text="Smad6<b2b390Clo>"
9 69364512 NC_000075.6:g.69364512T>A T A . . ANN=A|stop_gained|HIGH|Rora|19883|transcript|ENSMUST00000034766.13|Coding|5/11|c.771T>A|p.(C257*)|792/734461|771/1572|257/524||,A|stop_gained|HIGH|Rora|19883|transcript|ENSMUST00000113624.2|Coding|4/10|c.603T>A|p.(C201*)|942/90128|603/1404|201/468||;allele_of_genes="MGI:104661";alleles="MGI:2670437";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000075.6:g.69364512T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5653135";strain_name="Mixed_stock";symbol="Rora<sup>tmgc26</sup>";symbol_text="Rora<tmgc26>"
9 71255165 NC_000075.6:g.71255165T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Aldh1a2|19378|transcript|ENSMUST00000034723.5|Coding|4/13|c.493+2T>C|p.?|552/80455|494/1557|165/519||;allele_of_genes="MGI:107928";alleles="MGI:5004939";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000075.6:g.71255165T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5659033";strain_name="129S1/Sv_or_C57BL/6";symbol="Aldh1a2<sup>grim</sup>";symbol_text="Aldh1a2<grim>"
9 72958876 NC_000075.6:g.72958876T>A T A . . ANN=A|start_lost&missense_variant|HIGH|Dyx1c1|67685|transcript|ENSMUST00000034734.8|Coding|1/9|c.2T>A|p.0?|92/14280|2/1263|1/421||,A|start_lost&missense_variant|HIGH|Dyx1c1|67685|transcript|ENSMUST00000098567.8|Coding|1/7|c.2T>A|p.0?|92/14277|2/903|1/301||,A|start_lost&missense_variant|HIGH|Gm44503|72278|transcript|ENSMUST00000149692.1|Coding|1/16|c.2T>A|p.0?|25/57468|2/1164|1/388||;allele_of_genes="MGI:1914935,MGI:1914935";alleles="MGI:5311375,MGI:5311375";geneLevelConsequence="start_lost,start_lost";hgvs_nomenclature="NC_000075.6:g.72958876T>A";impact="HIGH,HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnaaf4<sup>b2b811.1Clo</sup>";symbol_text="Dnaaf4<b2b811.1Clo>"
9 73075544 NC_000075.6:g.73075544A>C A C . . ANN=C|missense_variant|MODERATE|Rab27a|11891|transcript|ENSMUST00000034722.4|Coding|2/6|c.130A>C|p.(I44L)|307/52736|130/666|44/222||,C|missense_variant|MODERATE|Rab27a|11891|transcript|ENSMUST00000184146.7|Coding|3/7|c.130A>C|p.(I44L)|459/52776|130/666|44/222||,C|non_coding_transcript_exon_variant|LOW|Rab27a|11891|transcript|ENSMUST00000184575.1|Noncoding|2/4|n.180A>C||180/40337||||;allele_of_genes="MGI:1861441";alleles="MGI:5775010";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.73075544A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rab27a<sup>m3Btlr</sup>";symbol_text="Rab27a<m3Btlr>"
9 73084981 NC_000075.6:g.73084981T>C T C . . ANN=C|missense_variant|MODERATE|Rab27a|11891|transcript|ENSMUST00000034722.4|Coding|4/6|c.290T>C|p.(L97P)|467/52736|290/666|97/222||,C|missense_variant|MODERATE|Rab27a|11891|transcript|ENSMUST00000184146.7|Coding|5/7|c.290T>C|p.(L97P)|619/52776|290/666|97/222||,C|non_coding_transcript_exon_variant|LOW|Rab27a|11891|transcript|ENSMUST00000184575.1|Noncoding|4/4|n.340T>C||340/40337||||;allele_of_genes="MGI:1861441";alleles="MGI:5640752";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.73084981T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rab27a<sup>m2Btlr</sup>";symbol_text="Rab27a<m2Btlr>"
9 75676678 NC_000075.6:g.75676678A>C A C . . ANN=C|missense_variant|MODERATE|Scg3|20255|transcript|ENSMUST00000034699.7|Coding|5/12|c.540T>G|p.(N180K)|871/40868|540/1416|180/472||,C|missense_variant|MODERATE|Scg3|20255|transcript|ENSMUST00000213324.1|Coding|5/12|c.540T>G|p.(N180K)|830/40651|540/1401|180/467||,C|3_prime_UTR_exon_variant|LOW|Scg3|20255|transcript|ENSMUST00000215603.1|Coding|4/7|c.*305T>G|p.(%3D)|459/17937|155/154|52/51||;allele_of_genes="MGI:103032";alleles="MGI:5702924";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.75676678A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Scg3<sup>m1Mhda</sup>";symbol_text="Scg3<m1Mhda>"
9 80245172 NC_000075.6:g.80245172G>T G T . . ANN=T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000035889.14|Coding|7/33|c.535G>T|p.(D179Y)|759/146699|535/3789|179/1263||,T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000076140.3|Coding|6/32|c.535G>T|p.(D179Y)|539/94093|535/3801|179/1267||,T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000113266.7|Coding|6/31|c.535G>T|p.(D179Y)|547/94101|535/3762|179/1254||,T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000113268.7|Coding|7/35|c.535G>T|p.(D179Y)|750/146689|535/3855|179/1285||,T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000127779.8|Coding|6/34|c.535G>T|p.(D179Y)|565/90440|535/3858|179/1286||,T|missense_variant|MODERATE|Myo6|17920|transcript|ENSMUST00000184480.7|Coding|7/36|c.535G>T|p.(D179Y)|563/142871|535/3885|179/1295||;allele_of_genes="MGI:104785";alleles="MGI:1913078";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.80245172G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Myo6<sup>Mhdatlc</sup>";symbol_text="Myo6<Mhdatlc>"
9 80262272 NC_000075.6:g.80262272A>G A G . . ANN=G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000035889.14|Coding|13/32|c.1382-2A>G|p.?|1606/146699|1382/3789|461/1263||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000076140.3|Coding|12/31|c.1382-2A>G|p.?|1386/94093|1382/3801|461/1267||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000113266.7|Coding|12/30|c.1382-2A>G|p.?|1394/94101|1382/3762|461/1254||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000113268.7|Coding|13/34|c.1382-2A>G|p.?|1597/146689|1382/3855|461/1285||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000127779.8|Coding|12/33|c.1382-2A>G|p.?|1412/90440|1382/3858|461/1286||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Myo6|17920|transcript|ENSMUST00000184480.7|Coding|13/35|c.1382-2A>G|p.?|1410/142871|1382/3885|461/1295||,G|non_coding_transcript_exon_variant|LOW|Myo6|17920|transcript|ENSMUST00000130496.1|Noncoding|1/3|n.226A>G||226/4625||||;allele_of_genes="MGI:104785";alleles="MGI:5792103";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000075.6:g.80262272A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myo6<sup>mpc285H</sup>";symbol_text="Myo6<mpc285H>"
9 95871140 NC_000075.6:g.95871140A>G A G . . ANN=G|synonymous_variant|LOW|Atr|245000|transcript|ENSMUST00000034980.8|Coding|9/47|c.2031A>G|p.(%3D)|2159/94048|2031/7908|677/2636||,G|synonymous_variant|LOW|Atr|245000|transcript|ENSMUST00000215311.1|Coding|9/47|c.2031A>G|p.(%3D)|2050/94076|2031/7926|677/2642||,G|non_coding_transcript_exon_variant|LOW|Atr|245000|transcript|ENSMUST00000185473.6|Noncoding|9/23|n.2117A>G||2117/46400||||;allele_of_genes="MGI:108028,MGI:108028,MGI:108028,MGI:108028";alleles="MGI:3851820,MGI:3851820,MGI:3851820,MGI:3851820";geneLevelConsequence="synonymous_variant,synonymous_variant,synonymous_variant,synonymous_variant";hgvs_nomenclature="NC_000075.6:g.95871140A>G";impact="LOW,LOW,LOW,LOW";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atr<sup>tm1Twgl</sup>";symbol_text="Atr<tm1Twgl>"
9 95871140 NC_000075.6:g.95871140A>G A G . . ANN=G|synonymous_variant|LOW|Atr|245000|transcript|ENSMUST00000034980.8|Coding|9/47|c.2031A>G|p.(%3D)|2159/94048|2031/7908|677/2636||,G|synonymous_variant|LOW|Atr|245000|transcript|ENSMUST00000215311.1|Coding|9/47|c.2031A>G|p.(%3D)|2050/94076|2031/7926|677/2642||,G|non_coding_transcript_exon_variant|LOW|Atr|245000|transcript|ENSMUST00000185473.6|Noncoding|9/23|n.2117A>G||2117/46400||||;allele_of_genes="MGI:108028,MGI:108028,MGI:108028,MGI:108028";alleles="MGI:3851821,MGI:3851821,MGI:3851821,MGI:3851821";geneLevelConsequence="synonymous_variant,synonymous_variant,synonymous_variant,synonymous_variant";hgvs_nomenclature="NC_000075.6:g.95871140A>G";impact="LOW,LOW,LOW,LOW";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Atr<sup>tm1.1Twgl</sup>";symbol_text="Atr<tm1.1Twgl>"
9 101971131 NC_000075.6:g.101971131_101971132delinsCC GT CC . . ANN=CC|mnv|HIGH|Ephb1|270190|transcript|ENSMUST00000035129.13|Coding|11/16|c.2089_2090delACinsGG|p.(T697G)|2443/432566|2089/2955|697/985||,CC|mnv|HIGH|Ephb1|270190|transcript|ENSMUST00000085169.11|Coding|10/15|c.1966_1967delACinsGG|p.(T656G)|2320/432123|1966/2832|656/944||;allele_of_genes="MGI:1096337";alleles="MGI:5505686";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.101971131_101971132delinsCC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Ephb1<sup>tm1.1Meg</sup>";symbol_text="Ephb1<tm1.1Meg>"
9 105650312 NC_000075.6:g.105650312_105650313delinsAG T A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Pik3r4|75669|transcript|ENSMUST00000065778.12|Coding|3/19|c.868-5T>A|p.?|1130/44488|868/4077|290/1359||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Pik3r4|75669|transcript|ENSMUST00000187446.1|Noncoding|2/7|n.2090-5T>A||2090/20802||||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Pik3r4|75669|transcript|ENSMUST00000187573.6|Noncoding|3/14|n.1322-5T>A||1322/36343||||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Pik3r4|75669|transcript|ENSMUST00000191117.6|Noncoding|3/4|n.1292-5T>A||1292/12683||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Pik3r4|75669|transcript|ENSMUST00000191268.6|Coding|3/19|c.868-5T>A|p.?|1301/44502|868/4077|290/1359||;allele_of_genes="MGI:1922919";alleles="MGI:6324670";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000075.6:g.105650312_105650313delinsAG";impact="LOW";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Pik3r4<sup>mbe</sup>";symbol_text="Pik3r4<mbe>"
9 106224139 NC_000075.6:g.106224139A>T A T . . ANN=T|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.628A>T|p.(N210Y)|734/4286|628/3099|210/1033||;allele_of_genes="MGI:1932389";alleles="MGI:4887254";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106224139A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>M8Btlr</sup>";symbol_text="Tlr9<M8Btlr>"
9 106224152 NC_000075.6:g.106224152T>A T A . . ANN=A|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.641T>A|p.(V214E)|747/4286|641/3099|214/1033||;allele_of_genes="MGI:1932389";alleles="MGI:3767571";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106224152T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>m3Btlr</sup>";symbol_text="Tlr9<m3Btlr>"
9 106224586 NC_000075.6:g.106224586T>C T C . . ANN=C|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.1075T>C|p.(S359P)|1181/4286|1075/3099|359/1033||;allele_of_genes="MGI:1932389";alleles="MGI:4838258";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106224586T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>M7Btlr</sup>";symbol_text="Tlr9<M7Btlr>"
9 106224647 NC_000075.6:g.106224647T>C T C . . ANN=C|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.1136T>C|p.(L379P)|1242/4286|1136/3099|379/1033||;allele_of_genes="MGI:1932389";alleles="MGI:5632141";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106224647T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>M9Btlr</sup>";symbol_text="Tlr9<M9Btlr>"
9 106224689 NC_000075.6:g.106224689T>C T C . . ANN=C|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.1178T>C|p.(L393P)|1284/4286|1178/3099|393/1033||;allele_of_genes="MGI:1932389";alleles="MGI:3774140";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106224689T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>m4Btlr</sup>";symbol_text="Tlr9<m4Btlr>"
9 106225007 NC_000075.6:g.106225007T>C T C . . ANN=C|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.1496T>C|p.(L499P)|1602/4286|1496/3099|499/1033||;allele_of_genes="MGI:1932389";alleles="MGI:3038816";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106225007T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Tlr9<sup>M1Btlr</sup>";symbol_text="Tlr9<M1Btlr>"
9 106225349 NC_000075.6:g.106225349G>T G T . . ANN=T|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.1838G>T|p.(R613L)|1944/4286|1838/3099|613/1033||;allele_of_genes="MGI:1932389";alleles="MGI:4415350";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106225349G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>m6Btlr</sup>";symbol_text="Tlr9<m6Btlr>"
9 106226465 NC_000075.6:g.106226465A>T A T . . ANN=T|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.2954A>T|p.(Q985L)|3060/4286|2954/3099|985/1033||;allele_of_genes="MGI:1932389";alleles="MGI:3767565";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106226465A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>M2Btlr</sup>";symbol_text="Tlr9<M2Btlr>"
9 106226593 NC_000075.6:g.106226593G>A G A . . ANN=A|missense_variant|MODERATE|Tlr9|81897|transcript|ENSMUST00000062241.10|Coding|2/2|c.3082G>A|p.(G1028R)|3188/4286|3082/3099|1028/1033||;allele_of_genes="MGI:1932389";alleles="MGI:3843064";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.106226593G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tlr9<sup>M5Btlr</sup>";symbol_text="Tlr9<M5Btlr>"
9 107513099 NC_000075.6:g.107513101_107513103del GGAT G . . ANN=G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000010210.12|Coding|9/38|c.899_901del|p.(D300del)|1356/129732|899/3447|300/1149||INFO_REALIGN_3_PRIME,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000085092.11|Coding|9/39|c.899_901del|p.(D300del)|1088/129114|899/3465|300/1155||INFO_REALIGN_3_PRIME,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000164988.8|Coding|9/38|c.899_901del|p.(D300del)|1088/129464|899/3474|300/1158||INFO_REALIGN_3_PRIME,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000166799.7|Coding|9/39|c.899_901del|p.(D300del)|899/127396|899/3474|300/1158||INFO_REALIGN_3_PRIME,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000168532.7|Coding|9/39|c.899_901del|p.(D300del)|1356/129732|899/3471|300/1157||INFO_REALIGN_3_PRIME,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000170737.2|Coding|9/38|c.899_901del|p.(D300del)|899/129275|899/3453|300/1151||INFO_REALIGN_3_PRIME,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Cacna2d2|56808|transcript|ENSMUST00000169354.7|Noncoding|6/8|n.506_508del||506/7931||||INFO_REALIGN_3_PRIME,G|splice_region_variant&non_coding_transcript_exon_variant|LOW|Cacna2d2|56808|transcript|ENSMUST00000171809.1|Noncoding|4/7|n.295_297del||295/4617||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:1929813";alleles="MGI:2149331";geneLevelConsequence="inframe_deletion,splice_region_variant";hgvs_nomenclature="NC_000075.6:g.107513101_107513103del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2159908";strain_name="C57BLKS/J";symbol="Cacna2d2<sup>du-2J</sup>";symbol_text="Cacna2d2<du-2J>"
9 107513280 NC_000075.6:g.107513280T>C T C . . ANN=C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000010210.12|Coding|10/38|c.950T>C|p.(V317A)|1407/129732|950/3447|317/1149||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000085092.11|Coding|10/39|c.950T>C|p.(V317A)|1139/129114|950/3465|317/1155||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000164988.8|Coding|10/38|c.950T>C|p.(V317A)|1139/129464|950/3474|317/1158||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000166799.7|Coding|10/39|c.950T>C|p.(V317A)|950/127396|950/3474|317/1158||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000168532.7|Coding|10/39|c.950T>C|p.(V317A)|1407/129732|950/3471|317/1157||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000170737.2|Coding|10/38|c.950T>C|p.(V317A)|950/129275|950/3453|317/1151||,C|non_coding_transcript_exon_variant|LOW|Cacna2d2|56808|transcript|ENSMUST00000169354.7|Noncoding|7/8|n.557T>C||557/7931||||,C|non_coding_transcript_exon_variant|LOW|Cacna2d2|56808|transcript|ENSMUST00000171809.1|Noncoding|5/7|n.346T>C||346/4617||||;allele_of_genes="MGI:1929813";alleles="MGI:5688505";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.107513280T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cacna2d2<sup>m1Btlr</sup>";symbol_text="Cacna2d2<m1Btlr>"
9 107524842 NC_000075.6:g.107524842A>C A C . . ANN=C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000010210.12|Coding|27/38|c.2318A>C|p.(D773A)|2775/129732|2318/3447|773/1149||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000085092.11|Coding|28/39|c.2339A>C|p.(D780A)|2528/129114|2339/3465|780/1155||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000164988.8|Coding|27/38|c.2336A>C|p.(D779A)|2525/129464|2336/3474|779/1158||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000166799.7|Coding|28/39|c.2339A>C|p.(D780A)|2339/127396|2339/3474|780/1158||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000168532.7|Coding|28/39|c.2339A>C|p.(D780A)|2796/129732|2339/3471|780/1157||,C|missense_variant|MODERATE|Cacna2d2|56808|transcript|ENSMUST00000170737.2|Coding|27/38|c.2318A>C|p.(D773A)|2318/129275|2318/3453|773/1151||;allele_of_genes="MGI:1929813";alleles="MGI:5707604";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.107524842A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Cacna2d2<sup>m1Mhda</sup>";symbol_text="Cacna2d2<m1Mhda>"
9 108207272 NC_000075.6:g.108207272T>A T A . . ANN=A|missense_variant|MODERATE|Dag1|13138|transcript|ENSMUST00000080435.8|Coding|4/4|c.2669A>T|p.(Y890F)|3036/57872|2669/2682|890/894||,A|missense_variant|MODERATE|Dag1|13138|transcript|ENSMUST00000166905.7|Coding|3/3|c.2669A>T|p.(Y890F)|2927/57964|2669/2682|890/894||,A|missense_variant|MODERATE|Dag1|13138|transcript|ENSMUST00000171412.6|Coding|4/4|c.2669A>T|p.(Y890F)|3101/57779|2669/2682|890/894||,A|missense_variant|MODERATE|Dag1|13138|transcript|ENSMUST00000191899.5|Coding|4/4|c.2669A>T|p.(Y890F)|3024/59325|2669/2682|890/894||;allele_of_genes="MGI:101864";alleles="MGI:5438989";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.108207272T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4438622";strain_name="129S4/SvJae-Tg(Prm-cre)70Og";symbol="Dag1<sup>tm1.1Swin</sup>";symbol_text="Dag1<tm1.1Swin>"
9 108209371 NC_000075.6:g.108209371_108209372delinsCA TG CA . . ANN=CA|mnv|HIGH|Dag1|13138|transcript|ENSMUST00000080435.8|Coding|4/4|c.569_570delCAinsTG|p.(T190M)|936/57872|569/2682|190/894||,CA|mnv|HIGH|Dag1|13138|transcript|ENSMUST00000166905.7|Coding|3/3|c.569_570delCAinsTG|p.(T190M)|827/57964|569/2682|190/894||,CA|mnv|HIGH|Dag1|13138|transcript|ENSMUST00000171412.6|Coding|4/4|c.569_570delCAinsTG|p.(T190M)|1001/57779|569/2682|190/894||,CA|mnv|HIGH|Dag1|13138|transcript|ENSMUST00000191899.5|Coding|4/4|c.569_570delCAinsTG|p.(T190M)|924/59325|569/2682|190/894||;allele_of_genes="MGI:101864";alleles="MGI:4940531";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.108209371_108209372delinsCA";impact="MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Dag1<sup>tm4.1Kcam</sup>";symbol_text="Dag1<tm4.1Kcam>"
9 108555995 NC_000075.6:g.108555995T>C T C . . ANN=C|missense_variant|MODERATE|Qrich1|69232|transcript|ENSMUST00000006851.14|Coding|8/11|c.1823T>C|p.(M608T)|2095/43050|1823/2334|608/778||,C|missense_variant|MODERATE|Qrich1|69232|transcript|ENSMUST00000112155.8|Coding|7/10|c.1823T>C|p.(M608T)|1975/42883|1823/2334|608/778||;allele_of_genes="MGI:1916482";alleles="MGI:5554436";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.108555995T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Qrich1<sup>b2b2404Clo</sup>";symbol_text="Qrich1<b2b2404Clo>"
9 109879876 NC_000075.6:g.109879876T>G T G . . ANN=G|missense_variant|MODERATE|Cdc25a|12530|transcript|ENSMUST00000094324.7|Coding|5/15|c.367T>G|p.(S123A)|778/18317|367/1545|123/515||,G|missense_variant|MODERATE|Cdc25a|12530|transcript|ENSMUST00000198308.4|Coding|4/13|c.184T>G|p.(S62A)|1052/16342|184/1236|62/412||,G|3_prime_UTR_exon_variant|LOW|Cdc25a|12530|transcript|ENSMUST00000198848.1|Coding|4/5|c.*63T>G|p.(%3D)|374/5541|262/261|88/87||;allele_of_genes="MGI:103198";alleles="MGI:3831687";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.109879876T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Cdc25a<sup>tm1Dvb</sup>";symbol_text="Cdc25a<tm1Dvb>"
9 109879893 NC_000075.6:g.109879893C>A C A . . ANN=A|missense_variant|MODERATE|Cdc25a|12530|transcript|ENSMUST00000094324.7|Coding|5/15|c.384C>A|p.(H128Q)|795/18317|384/1545|128/515||,A|missense_variant|MODERATE|Cdc25a|12530|transcript|ENSMUST00000198308.4|Coding|4/13|c.201C>A|p.(H67Q)|1069/16342|201/1236|67/412||,A|3_prime_UTR_exon_variant|LOW|Cdc25a|12530|transcript|ENSMUST00000198848.1|Coding|4/5|c.*80C>A|p.(%3D)|391/5541|262/261|88/87||;allele_of_genes="MGI:103198";alleles="MGI:2445422";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.109879893C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159737";strain_name="BALB/cJ";symbol="Cdc25a<sup>m1Rfp</sup>";symbol_text="Cdc25a<m1Rfp>"
9 111268226 NC_000075.6:g.111268226C>G C G . . ANN=G|missense_variant|MODERATE|Mlh1|17350|transcript|ENSMUST00000035079.9|Coding|2/19|c.199G>C|p.(G67R)|466/43537|199/2283|67/761||,G|3_prime_UTR_exon_variant|LOW|Mlh1|17350|transcript|ENSMUST00000135218.7|Coding|2/18|c.*77G>C|p.(%3D)|216/43319|118/117|40/39||,G|non_coding_transcript_exon_variant|LOW|Mlh1|17350|transcript|ENSMUST00000123869.7|Noncoding|2/17|n.275G>C||275/41713||||,G|non_coding_transcript_exon_variant|LOW|Mlh1|17350|transcript|ENSMUST00000134316.1|Noncoding|2/7|n.209G>C||209/14378||||;allele_of_genes="MGI:101938";alleles="MGI:3783409";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.111268226C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651512";strain_name="STOCK_129/Sv_and_C57BL/6J_and_SJL";symbol="Mlh1<sup>tm1Wed</sup>";symbol_text="Mlh1<tm1Wed>"
9 114709279 NC_000075.6:g.114709279A>T A T . . ANN=T|missense_variant|MODERATE|Dync1li1|235661|transcript|ENSMUST00000047404.6|Coding|5/13|c.703A>T|p.(N235Y)|795/35513|703/1572|235/524||;allele_of_genes="MGI:2135610";alleles="MGI:4950685";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000075.6:g.114709279A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2683685";strain_name="BALB/cAnNCrl";symbol="Dync1li1<sup>m1Emcf</sup>";symbol_text="Dync1li1<m1Emcf>"
9 119337823 NC_000075.6:g.119337823C>A C A . . ANN=A|missense_variant|MODERATE|Myd88|17874|transcript|ENSMUST00000035092.6|Coding|4/6|c.667G>T|p.(V223F)|749/4108|667/891|223/297||,A|5_prime_UTR_intron_variant|LOW|Slc22a14|382113|transcript|ENSMUST00000170400.8|Coding|1/10|c.-7+27704G>T|p.(%3D)|28/196098|1/1890|1/630||,A|non_coding_transcript_exon_variant|LOW|Myd88|17874|transcript|ENSMUST00000150837.1|Noncoding|2/4|n.1259G>T||1259/4057||||;allele_of_genes="MGI:108005,MGI:108005";alleles="MGI:6113640,MGI:6113640";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.119337823C>A";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myd88<sup>M4Btlr</sup>";symbol_text="Myd88<M4Btlr>"
9 119338114 NC_000075.6:g.119338114A>T A T . . ANN=T|missense_variant|MODERATE|Myd88|17874|transcript|ENSMUST00000035092.6|Coding|3/6|c.536T>A|p.(I179N)|618/4108|536/891|179/297||,T|5_prime_UTR_intron_variant|LOW|Slc22a14|382113|transcript|ENSMUST00000170400.8|Coding|1/10|c.-7+27413T>A|p.(%3D)|28/196098|1/1890|1/630||,T|non_coding_transcript_exon_variant|LOW|Myd88|17874|transcript|ENSMUST00000150837.1|Noncoding|2/4|n.968T>A||968/4057||||;allele_of_genes="MGI:108005,MGI:108005";alleles="MGI:3641255,MGI:3641255";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.119338114A>T";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Myd88<sup>poc</sup>";symbol_text="Myd88<poc>"
9 119338692 NC_000075.6:g.119338692T>C T C . . ANN=C|missense_variant|MODERATE|Myd88|17874|transcript|ENSMUST00000035092.6|Coding|2/6|c.347A>G|p.(Y116C)|429/4108|347/891|116/297||,C|5_prime_UTR_intron_variant|LOW|Slc22a14|382113|transcript|ENSMUST00000170400.8|Coding|1/10|c.-7+26835A>G|p.(%3D)|28/196098|1/1890|1/630||,C|non_coding_transcript_exon_variant|LOW|Myd88|17874|transcript|ENSMUST00000150837.1|Noncoding|2/4|n.390A>G||390/4057||||;allele_of_genes="MGI:108005,MGI:108005";alleles="MGI:3641234,MGI:3641234";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000075.6:g.119338692T>C";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Myd88<sup>lkd</sup>";symbol_text="Myd88<lkd>"
10 10741508 NC_000076.6:g.10741508G>T G T . . ANN=T|stop_gained|HIGH|Grm1|14816|transcript|ENSMUST00000044306.12|Coding|6/9|c.1530C>A|p.(Y510*)|1956/396298|1530/3600|510/1200||,T|stop_gained|HIGH|Grm1|14816|transcript|ENSMUST00000105560.1|Coding|5/9|c.1530C>A|p.(Y510*)|1948/392156|1530/2721|510/907||,T|stop_gained|HIGH|Grm1|14816|transcript|ENSMUST00000105561.8|Coding|6/10|c.1530C>A|p.(Y510*)|1905/393718|1530/2721|510/907||;allele_of_genes="MGI:1351338";alleles="MGI:5688490";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000076.6:g.10741508G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Grm1<sup>m1Btlr</sup>";symbol_text="Grm1<m1Btlr>"
10 19601485 NC_000076.6:g.19601485T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ifngr1|15979|transcript|ENSMUST00000020188.12|Coding|3/6|c.391+2T>C|p.?|529/18281|392/1434|131/478||,C|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Ifngr1|15979|transcript|ENSMUST00000164591.2|Coding|3/6|c.*149+2T>C|p.(%3D)|391/18157|229/228|77/76||,C|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Ifngr1|15979|transcript|ENSMUST00000172253.1|Noncoding|2/2|n.300+2T>C||301/11713||||;allele_of_genes="MGI:107655";alleles="MGI:5806453";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.19601485T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ifngr1<sup>m1Btlr</sup>";symbol_text="Ifngr1<m1Btlr>"
10 19609588 NC_000076.6:g.19609588A>T A T . . ANN=T|missense_variant|MODERATE|Ifngr1|15979|transcript|ENSMUST00000020188.12|Coding|7/7|c.1334A>T|p.(Y445F)|1471/18281|1334/1434|445/478||,T|3_prime_UTR_exon_variant|LOW|Ifngr1|15979|transcript|ENSMUST00000164591.2|Coding|7/7|c.*1092A>T|p.(%3D)|1333/18157|229/228|77/76||;allele_of_genes="MGI:107655";alleles="MGI:4361521";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.19609588A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Ifngr1<sup>tm1.1Rost</sup>";symbol_text="Ifngr1<tm1.1Rost>"
10 28781907 NC_000076.6:g.28781907T>C T C . . ANN=C|missense_variant|MODERATE|Themis|210757|transcript|ENSMUST00000056097.10|Coding|4/6|c.929T>C|p.(I310T)|1229/215456|929/1911|310/637||,C|missense_variant|MODERATE|Themis|210757|transcript|ENSMUST00000060409.12|Coding|4/5|c.929T>C|p.(I310T)|1229/121561|929/1818|310/606||,C|missense_variant|MODERATE|Themis|210757|transcript|ENSMUST00000105516.8|Coding|4/5|c.929T>C|p.(I310T)|1192/129420|929/1788|310/596||,C|missense_variant|MODERATE|Themis|210757|transcript|ENSMUST00000161345.1|Coding|3/3|c.470T>C|p.(I157T)|497/113414|470/609|157/203||,C|3_prime_UTR_exon_variant|LOW|Themis|210757|transcript|ENSMUST00000159927.7|Coding|5/6|c.*806T>C|p.(%3D)|1124/215192|286/285|96/95||;allele_of_genes="MGI:2443552";alleles="MGI:6304287";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.28781907T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Themis<sup>m5Btlr</sup>";symbol_text="Themis<m5Btlr>"
10 44441201 NC_000076.6:g.44441201T>C T C . . ANN=C|missense_variant|MODERATE|Prdm1|12142|transcript|ENSMUST00000039174.10|Coding|6/8|c.1724A>G|p.(D575G)|1944/21572|1724/2571|575/857||,C|missense_variant|MODERATE|Prdm1|12142|transcript|ENSMUST00000105490.2|Coding|5/7|c.1625A>G|p.(D542G)|1804/20395|1625/2472|542/824||,C|missense_variant|MODERATE|Prdm1|12142|transcript|ENSMUST00000218369.1|Coding|5/7|c.1670A>G|p.(D557G)|1670/17544|1670/2517|557/839||;allele_of_genes="MGI:99655";alleles="MGI:5446157";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.44441201T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prdm1<sup>b2b1765Clo</sup>";symbol_text="Prdm1<b2b1765Clo>"
10 56064473 NC_000076.6:g.56064473C>T C T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tbc1d32|544696|transcript|ENSMUST00000099739.4|Coding|27/32|c.3100+1G>A|p.?|3158/214397|3101/3891|1034/1297||,T|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Tbc1d32|544696|transcript|ENSMUST00000219385.1|Noncoding|27/29|n.3157+1G>A||3158/180521||||;allele_of_genes="MGI:2442827";alleles="MGI:5648205";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.56064473C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbc1d32<sup>b2b3260.1Clo</sup>";symbol_text="Tbc1d32<b2b3260.1Clo>"
10 56064478 NC_000076.6:g.56064478G>T G T . . ANN=T|stop_gained|HIGH|Tbc1d32|544696|transcript|ENSMUST00000099739.4|Coding|27/33|c.3096C>A|p.(Y1032*)|3153/214397|3096/3891|1032/1297||,T|non_coding_transcript_exon_variant|LOW|Tbc1d32|544696|transcript|ENSMUST00000219385.1|Noncoding|27/30|n.3153C>A||3153/180521||||;allele_of_genes="MGI:2442827";alleles="MGI:5560497";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000076.6:g.56064478G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbc1d32<sup>b2b2596Clo</sup>";symbol_text="Tbc1d32<b2b2596Clo>"
10 56195354 NC_000076.6:g.56195354A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Tbc1d32|544696|transcript|ENSMUST00000099739.4|Coding|9/32|c.1071+2T>A|p.?|1129/214397|1072/3891|358/1297||,T|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Tbc1d32|544696|transcript|ENSMUST00000219385.1|Noncoding|9/29|n.1128+2T>A||1129/180521||||;allele_of_genes="MGI:2442827";alleles="MGI:5491268";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.56195354A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbc1d32<sup>b2b2284Clo</sup>";symbol_text="Tbc1d32<b2b2284Clo>"
10 59403966 NC_000076.6:g.59403966T>A T A . . ANN=A|missense_variant|MODERATE|Pla2g12b|69836|transcript|ENSMUST00000009790.13|Coding|1/4|c.196T>A|p.(Y66N)|307/18317|196/588|66/196||;allele_of_genes="MGI:1917086";alleles="MGI:5791984";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.59403966T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pla2g12b<sup>mpc96H</sup>";symbol_text="Pla2g12b<mpc96H>"
10 60308056 NC_000076.6:g.60308056G>T G T . . ANN=T|stop_gained|HIGH|Cdh23|22295|transcript|ENSMUST00000073242.10|Coding|58/67|c.8766C>A|p.(Y2922*)|8766/354586|8766/10062|2922/3354||,T|stop_gained|HIGH|Cdh23|22295|transcript|ENSMUST00000105461.9|Coding|62/71|c.8769C>A|p.(Y2923*)|9176/393741|8769/10065|2923/3355||,T|stop_gained|HIGH|Cdh23|22295|transcript|ENSMUST00000105462.7|Coding|58/66|c.8775C>A|p.(Y2925*)|8775/354586|8775/9966|2925/3322||,T|stop_gained|HIGH|Cdh23|22295|transcript|ENSMUST00000105463.8|Coding|62/70|c.8769C>A|p.(Y2923*)|9176/393741|8769/9960|2923/3320||,T|stop_gained|HIGH|Cdh23|22295|transcript|ENSMUST00000105464.8|Coding|61/70|c.8763C>A|p.(Y2921*)|9170/393741|8763/10059|2921/3353||,T|non_coding_transcript_exon_variant|LOW|Cdh23|22295|transcript|ENSMUST00000128249.7|Noncoding|58/67|n.8760C>A||8760/354035||||,T|non_coding_transcript_exon_variant|LOW|Cdh23|22295|transcript|ENSMUST00000135638.7|Noncoding|58/66|n.8760C>A||8760/354035||||,T|non_coding_transcript_exon_variant|LOW|Cdh23|22295|transcript|ENSMUST00000151194.7|Noncoding|14/23|n.2391C>A||2391/18312||||,T|non_coding_transcript_exon_variant|LOW|Cdh23|22295|transcript|ENSMUST00000153525.7|Noncoding|14/22|n.2391C>A||2391/18312||||;allele_of_genes="MGI:1890219";alleles="MGI:5513006";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000076.6:g.60308056G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cdh23<sup>m1Btlr</sup>";symbol_text="Cdh23<m1Btlr>"
10 70957659 NC_000076.6:g.70957659A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Bicc1|83675|transcript|ENSMUST00000014473.5|Coding|6/21|c.606+2T>C|p.?|681/234589|607/2856|203/952||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Bicc1|83675|transcript|ENSMUST00000131445.7|Coding|6/21|c.360+2T>C|p.?|455/221759|361/2610|121/870||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Bicc1|83675|transcript|ENSMUST00000143791.7|Coding|6/20|c.606+2T>C|p.?|691/236869|607/2934|203/978||;allele_of_genes="MGI:1933388";alleles="MGI:5285079";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.70957659A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Bicc1<sup>b2b222Clo</sup>";symbol_text="Bicc1<b2b222Clo>"
10 71027954 NC_000076.6:g.71027954G>A G A . . ANN=A|missense_variant|MODERATE|Bicc1|83675|transcript|ENSMUST00000014473.5|Coding|3/22|c.257C>T|p.(T86I)|331/234589|257/2856|86/952||,A|missense_variant|MODERATE|Bicc1|83675|transcript|ENSMUST00000131445.7|Coding|3/22|c.11C>T|p.(T4I)|105/221759|11/2610|4/870||,A|missense_variant|MODERATE|Bicc1|83675|transcript|ENSMUST00000143791.7|Coding|3/21|c.257C>T|p.(T86I)|341/236869|257/2934|86/978||;allele_of_genes="MGI:1933388";alleles="MGI:3776918";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.71027954G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Bicc1<sup>m1Btlr</sup>";symbol_text="Bicc1<m1Btlr>"
10 74210425 NC_000076.6:g.74210425A>T A T . . ANN=T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000064562.13|Coding|6/31|c.533A>T|p.(D178V)|954/812899|533/5598|178/1866||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000092420.12|Coding|6/32|c.533A>T|p.(D178V)|938/810782|533/5802|178/1934||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105424.9|Coding|6/34|c.533A>T|p.(D178V)|938/810782|533/5817|178/1939||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105426.9|Coding|6/33|c.533A>T|p.(D178V)|942/810654|533/5811|178/1937||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105429.9|Coding|6/32|c.533A>T|p.(D178V)|938/810782|533/5604|178/1868||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000125006.8|Coding|6/26|c.533A>T|p.(D178V)|878/685658|533/3516|178/1172||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000125055.8|Coding|6/33|c.533A>T|p.(D178V)|938/810782|533/2055|178/685||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000125517.8|Coding|6/12|c.533A>T|p.(D178V)|938/822845|533/2160|178/720||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000126920.8|Coding|5/33|c.467A>T|p.(D156V)|872/810782|467/5751|156/1917||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000129404.8|Coding|5/32|c.467A>T|p.(D156V)|872/810782|467/5742|156/1914||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000131321.8|Coding|6/33|c.533A>T|p.(D178V)|938/810782|533/5811|178/1937||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000131724.8|Coding|6/36|c.533A>T|p.(D178V)|938/822845|533/4557|178/1519||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000134009.8|Coding|6/16|c.533A>T|p.(D178V)|878/685658|533/1953|178/651||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000136096.8|Coding|6/32|c.533A>T|p.(D178V)|938/810782|533/2055|178/685||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000144302.8|Coding|6/14|c.533A>T|p.(D178V)|938/822845|533/981|178/327||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000147189.8|Coding|6/31|c.533A>T|p.(D178V)|938/810782|533/5691|178/1897||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000149977.8|Coding|6/34|c.533A>T|p.(D178V)|942/824596|533/5028|178/1676||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000151116.8|Coding|7/37|c.548A>T|p.(D183V)|953/822845|548/5373|183/1791||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000152655.8|Coding|6/18|c.533A>T|p.(D178V)|938/822845|533/2946|178/982||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000152819.8|Coding|6/11|c.533A>T|p.(D178V)|938/822845|533/1953|178/651||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000155701.8|Coding|6/10|c.533A>T|p.(D178V)|938/822845|533/1005|178/335||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000177107.7|Coding|7/36|c.548A>T|p.(D183V)|953/824432|548/5049|183/1683||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000177420.6|Coding|7/27|c.548A>T|p.(D183V)|893/685658|548/3531|183/1177||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000191709.5|Coding|6/34|c.548A>T|p.(D183V)|548/697163|548/5346|183/1782||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000191854.5|Coding|6/35|c.533A>T|p.(D178V)|938/827855|533/5034|178/1678||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193174.5|Coding|6/35|c.533A>T|p.(D178V)|958/822511|533/5352|178/1784||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193361.5|Coding|7/35|c.548A>T|p.(D183V)|953/811716|548/5832|183/1944||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193739.5|Coding|6/33|c.548A>T|p.(D183V)|548/699017|548/5034|183/1678||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000195531.5|Coding|5/35|c.533A>T|p.(D178V)|533/699113|533/5145|178/1715||,T|5_prime_UTR_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000124046.7|Coding|2/28|c.-90-106538A>T|p.(%3D)|497/822845|1/3390|1/1130||,T|5_prime_UTR_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000146682.7|Coding|1/8|c.-24-383735A>T|p.(%3D)|378/824432|1/1248|1/416||,T|non_coding_transcript_exon_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000123398.8|Noncoding|9/14|n.1573A>T||1573/1217923||||;allele_of_genes="MGI:1891428";alleles="MGI:5497993";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.74210425A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcdh15<sup>m2Btlr</sup>";symbol_text="Pcdh15<m2Btlr>"
10 74379417 NC_000076.6:g.74379417G>T G T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000092420.12|Coding|16/31|c.1997+5G>T|p.?|2403/810782|1998/5802|666/1934||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000105424.9|Coding|16/33|c.1997+5G>T|p.?|2403/810782|1998/5817|666/1939||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000105426.9|Coding|16/32|c.1997+5G>T|p.?|2407/810654|1998/5811|666/1937||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000124046.7|Coding|9/28|c.830+5G>T|p.?|1417/822845|831/3390|277/1130||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125006.8|Coding|16/25|c.1997+5G>T|p.?|2343/685658|1998/3516|666/1172||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000126920.8|Coding|15/32|c.1931+5G>T|p.?|2337/810782|1932/5751|644/1917||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000129404.8|Coding|15/31|c.1931+5G>T|p.?|2337/810782|1932/5742|644/1914||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000131321.8|Coding|16/32|c.1997+5G>T|p.?|2403/810782|1998/5811|666/1937||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000131724.8|Coding|16/35|c.1997+5G>T|p.?|2403/822845|1998/4557|666/1519||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000147189.8|Coding|15/30|c.1886+5G>T|p.?|2292/810782|1887/5691|629/1897||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000149977.8|Coding|16/33|c.1997+5G>T|p.?|2407/824596|1998/5028|666/1676||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000151116.8|Coding|18/36|c.2033+5G>T|p.?|2439/822845|2034/5373|678/1791||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152655.8|Coding|16/17|c.1997+5G>T|p.?|2403/822845|1998/2946|666/982||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000177107.7|Coding|17/35|c.2012+5G>T|p.?|2418/824432|2013/5049|671/1683||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000177420.6|Coding|17/26|c.2012+5G>T|p.?|2358/685658|2013/3531|671/1177||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000191709.5|Coding|16/33|c.2012+5G>T|p.?|2013/697163|2013/5346|671/1782||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000191854.5|Coding|16/34|c.1997+5G>T|p.?|2403/827855|1998/5034|666/1678||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000193174.5|Coding|17/34|c.2018+5G>T|p.?|2444/822511|2019/5352|673/1784||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000193361.5|Coding|17/34|c.2012+5G>T|p.?|2418/811716|2013/5832|671/1944||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000193739.5|Coding|16/32|c.2012+5G>T|p.?|2013/699017|2013/5034|671/1678||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000194315.1|Coding|2/19|c.212+5G>T|p.?|213/276809|213/4002|71/1334||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000195531.5|Coding|15/34|c.1997+5G>T|p.?|1998/699113|1998/5145|666/1715||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000064562.13|Coding|14/30|c.1785-6450G>T|p.(%3D)|2206/812899|1785/5598|595/1866||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000105429.9|Coding|14/31|c.1785-6450G>T|p.(%3D)|2190/810782|1785/5604|595/1868||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125055.8|Coding|15/32|c.1918-6450G>T|p.(%3D)|2323/810782|1918/2055|640/685||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125517.8|Coding|11/11|c.1305+62248G>T|p.(%3D)|1711/822845|1306/2160|436/720||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000134009.8|Coding|11/15|c.1305+62248G>T|p.(%3D)|1651/685658|1306/1953|436/651||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000136096.8|Coding|15/31|c.1918-6450G>T|p.(%3D)|2323/810782|1918/2055|640/685||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000144302.8|Coding|8/13|c.876+149037G>T|p.(%3D)|1282/822845|877/981|293/327||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152819.8|Coding|10/10|c.1098+76211G>T|p.(%3D)|1504/822845|1099/1953|367/651||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000155701.8|Coding|9/9|c.985+88342G>T|p.(%3D)|1391/822845|986/1005|329/335||,T|5_prime_UTR_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000146682.7|Coding|1/8|c.-24-214743G>T|p.(%3D)|378/824432|1/1248|1/416||;allele_of_genes="MGI:1891428";alleles="MGI:6114106";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000076.6:g.74379417G>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcdh15<sup>m5Btlr</sup>";symbol_text="Pcdh15<m5Btlr>"
10 74624284 NC_000076.6:g.74624284C>T C T . . ANN=T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000064562.13|Coding|28/31|c.3850C>T|p.(R1284W)|4271/812899|3850/5598|1284/1866||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000092420.12|Coding|30/32|c.4063C>T|p.(R1355W)|4468/810782|4063/5802|1355/1934||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105424.9|Coding|30/34|c.4063C>T|p.(R1355W)|4468/810782|4063/5817|1355/1939||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105426.9|Coding|30/33|c.4063C>T|p.(R1355W)|4472/810654|4063/5811|1355/1937||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000105429.9|Coding|28/32|c.3850C>T|p.(R1284W)|4255/810782|3850/5604|1284/1868||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000124046.7|Coding|23/29|c.2896C>T|p.(R966W)|3482/822845|2896/3390|966/1130||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000126920.8|Coding|29/33|c.3997C>T|p.(R1333W)|4402/810782|3997/5751|1333/1917||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000129404.8|Coding|29/32|c.3997C>T|p.(R1333W)|4402/810782|3997/5742|1333/1914||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000131321.8|Coding|30/33|c.4063C>T|p.(R1355W)|4468/810782|4063/5811|1355/1937||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000131724.8|Coding|30/36|c.4063C>T|p.(R1355W)|4468/822845|4063/4557|1355/1519||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000146682.7|Coding|4/9|c.322C>T|p.(R108W)|723/824432|322/1248|108/416||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000147189.8|Coding|29/31|c.3952C>T|p.(R1318W)|4357/810782|3952/5691|1318/1897||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000149977.8|Coding|30/34|c.4063C>T|p.(R1355W)|4472/824596|4063/5028|1355/1676||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000151116.8|Coding|32/37|c.4099C>T|p.(R1367W)|4504/822845|4099/5373|1367/1791||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000177107.7|Coding|31/36|c.4078C>T|p.(R1360W)|4483/824432|4078/5049|1360/1683||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000191709.5|Coding|30/34|c.4078C>T|p.(R1360W)|4078/697163|4078/5346|1360/1782||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000191854.5|Coding|30/35|c.4063C>T|p.(R1355W)|4468/827855|4063/5034|1355/1678||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193174.5|Coding|31/35|c.4084C>T|p.(R1362W)|4509/822511|4084/5352|1362/1784||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193361.5|Coding|31/35|c.4078C>T|p.(R1360W)|4483/811716|4078/5832|1360/1944||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000193739.5|Coding|30/33|c.4078C>T|p.(R1360W)|4078/699017|4078/5034|1360/1678||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000194315.1|Coding|16/20|c.2278C>T|p.(R760W)|2278/276809|2278/4002|760/1334||,T|missense_variant|MODERATE|Pcdh15|11994|transcript|ENSMUST00000195531.5|Coding|29/35|c.4063C>T|p.(R1355W)|4063/699113|4063/5145|1355/1715||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125517.8|Coding|11/11|c.1306-19080C>T|p.(%3D)|1711/822845|1306/2160|436/720||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152655.8|Coding|17/17|c.2092-19080C>T|p.(%3D)|2497/822845|2092/2946|698/982||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152819.8|Coding|10/10|c.1099-19080C>T|p.(%3D)|1504/822845|1099/1953|367/651||,T|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000155701.8|Coding|9/9|c.986-19080C>T|p.(%3D)|1391/822845|986/1005|329/335||,T|3_prime_UTR_exon_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125055.8|Coding|29/33|c.*1928C>T|p.(%3D)|4388/810782|2056/2055|686/685||,T|3_prime_UTR_exon_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000136096.8|Coding|29/32|c.*1928C>T|p.(%3D)|4388/810782|2056/2055|686/685||,T|3_prime_UTR_exon_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000144302.8|Coding|10/14|c.*152C>T|p.(%3D)|1538/822845|982/981|328/327||,T|non_coding_transcript_exon_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000128843.1|Noncoding|4/4|n.359C>T||359/40401||||;allele_of_genes="MGI:1891428";alleles="MGI:5806326";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.74624284C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcdh15<sup>m4Btlr</sup>";symbol_text="Pcdh15<m4Btlr>"
10 74626844 NC_000076.6:g.74626844T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000064562.13|Coding|30/30|c.4154+2T>A|p.?|4576/812899|4155/5598|1385/1866||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000092420.12|Coding|31/31|c.4358+2T>A|p.?|4764/810782|4359/5802|1453/1934||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000105424.9|Coding|32/33|c.4367+2T>A|p.?|4773/810782|4368/5817|1456/1939||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000105426.9|Coding|32/32|c.4367+2T>A|p.?|4777/810654|4368/5811|1456/1937||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000105429.9|Coding|30/31|c.4154+2T>A|p.?|4560/810782|4155/5604|1385/1868||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000124046.7|Coding|25/28|c.3200+2T>A|p.?|3787/822845|3201/3390|1067/1130||,A|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000125055.8|Coding|31/32|c.*2232+2T>A|p.(%3D)|4693/810782|2056/2055|686/685||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000126920.8|Coding|31/32|c.4301+2T>A|p.?|4707/810782|4302/5751|1434/1917||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000129404.8|Coding|30/31|c.4292+2T>A|p.?|4698/810782|4293/5742|1431/1914||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000131321.8|Coding|32/32|c.4367+2T>A|p.?|4773/810782|4368/5811|1456/1937||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000131724.8|Coding|32/35|c.4367+2T>A|p.?|4773/822845|4368/4557|1456/1519||,A|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000136096.8|Coding|31/31|c.*2232+2T>A|p.(%3D)|4693/810782|2056/2055|686/685||,A|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000144302.8|Coding|12/13|c.*456+2T>A|p.(%3D)|1843/822845|982/981|328/327||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000147189.8|Coding|30/30|c.4247+2T>A|p.?|4653/810782|4248/5691|1416/1897||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000149977.8|Coding|32/33|c.4367+2T>A|p.?|4777/824596|4368/5028|1456/1676||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000151116.8|Coding|34/36|c.4403+2T>A|p.?|4809/822845|4404/5373|1468/1791||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000177107.7|Coding|33/35|c.4382+2T>A|p.?|4788/824432|4383/5049|1461/1683||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000191709.5|Coding|32/33|c.4382+2T>A|p.?|4383/697163|4383/5346|1461/1782||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000191854.5|Coding|32/34|c.4367+2T>A|p.?|4773/827855|4368/5034|1456/1678||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000193174.5|Coding|33/34|c.4388+2T>A|p.?|4814/822511|4389/5352|1463/1784||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000193361.5|Coding|33/34|c.4382+2T>A|p.?|4788/811716|4383/5832|1461/1944||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000193739.5|Coding|31/32|c.4373+2T>A|p.?|4374/699017|4374/5034|1458/1678||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000194315.1|Coding|18/19|c.2582+2T>A|p.?|2583/276809|2583/4002|861/1334||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Pcdh15|11994|transcript|ENSMUST00000195531.5|Coding|30/34|c.4358+2T>A|p.?|4359/699113|4359/5145|1453/1715||,A|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000125517.8|Coding|11/11|c.1306-16520T>A|p.(%3D)|1711/822845|1306/2160|436/720||,A|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000146682.7|Coding|4/8|c.461+2421T>A|p.(%3D)|863/824432|462/1248|154/416||,A|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152655.8|Coding|17/17|c.2092-16520T>A|p.(%3D)|2497/822845|2092/2946|698/982||,A|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000152819.8|Coding|10/10|c.1099-16520T>A|p.(%3D)|1504/822845|1099/1953|367/651||,A|coding_transcript_intron_variant|LOW|Pcdh15|11994|transcript|ENSMUST00000155701.8|Coding|9/9|c.986-16520T>A|p.(%3D)|1391/822845|986/1005|329/335||;allele_of_genes="MGI:1891428";alleles="MGI:5527537";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.74626844T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcdh15<sup>m3Btlr</sup>";symbol_text="Pcdh15<m3Btlr>"
10 78202928 NC_000076.6:g.78202928A>G A G . . ANN=G|missense_variant|MODERATE|Trappc10|216131|transcript|ENSMUST00000000384.7|Coding|15/23|c.2329T>C|p.(Y777H)|2468/57917|2329/3777|777/1259||,G|missense_variant|MODERATE|Trappc10|216131|transcript|ENSMUST00000217858.1|Coding|2/4|c.434T>C|p.(V145A)|434/3401|434/544|145/181||,G|non_coding_transcript_exon_variant|LOW|Trappc10|216131|transcript|ENSMUST00000218124.1|Noncoding|3/3|n.2921T>C||2921/7037||||;allele_of_genes="MGI:1336209";alleles="MGI:5615094";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.78202928A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trappc10<sup>b2b2613Clo</sup>";symbol_text="Trappc10<b2b2613Clo>"
10 78211621 NC_000076.6:g.78211621A>G A G . . ANN=G|missense_variant&splice_region_variant|MODERATE|Trappc10|216131|transcript|ENSMUST00000000384.7|Coding|8/23|c.1040T>C|p.(V347A)|1179/57917|1040/3777|347/1259||;allele_of_genes="MGI:1336209";alleles="MGI:5560902";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000076.6:g.78211621A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Trappc10<sup>b2b2416Clo</sup>";symbol_text="Trappc10<b2b2416Clo>"
10 79724786 NC_000076.6:g.79724786T>A T A . . ANN=A|missense_variant|MODERATE|Hcn2|15166|transcript|ENSMUST00000020581.2|Coding|2/9|c.950T>A|p.(I317N)|985/19475|950/2592|317/864||,A|missense_variant|MODERATE|Hcn2|15166|transcript|ENSMUST00000099513.7|Coding|2/8|c.950T>A|p.(I317N)|985/19475|950/2592|317/864||;allele_of_genes="MGI:1298210";alleles="MGI:6114037";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.79724786T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hcn2<sup>m1Btlr</sup>";symbol_text="Hcn2<m1Btlr>"
10 79729113 NC_000076.6:g.79729113T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hcn2|15166|transcript|ENSMUST00000020581.2|Coding|4/8|c.1356+2T>A|p.?|1392/19475|1357/2592|453/864||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Hcn2|15166|transcript|ENSMUST00000099513.7|Coding|4/7|c.1356+2T>A|p.?|1392/19475|1357/2592|453/864||;allele_of_genes="MGI:1298210";alleles="MGI:6305115";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.79729113T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hcn2<sup>m4Btlr</sup>";symbol_text="Hcn2<m4Btlr>"
10 80053660 NC_000076.6:g.80053660_80053663delinsATTAATC TTAA ATTAATC . . ANN=ATTAATC|internal_feature_elongation&complex_substitution|HIGH|Gpx4|625249|transcript|ENSMUST00000105372.7|Coding|1/7|c.29_32delTTAAinsATTAATC|p.(L10_K11delinsH*)|173/2952|29/594|10/198||,ATTAATC|non_coding_transcript_intron_variant|LOW|Gpx4|625249|transcript|ENSMUST00000144698.7|Noncoding|2/6|n.294-854_294-851delTTAAinsATTAATC||294/9274||||;allele_of_genes="MGI:104767";alleles="MGI:5433757";geneLevelConsequence="stop_gained,protein_altering_variant";hgvs_nomenclature="NC_000076.6:g.80053660_80053663delinsATTAATC";impact="HIGH";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Gpx4<sup>tm3Marc</sup>";symbol_text="Gpx4<tm3Marc>"
10 80054737 NC_000076.6:g.80054737_80054739delinsAGC TGA AGC . . ANN=AGC|mnv|HIGH|Gpx4|625249|transcript|ENSMUST00000097227.9|Coding|3/7|c.385_387delTGAinsAGC|p.(*129S)|397/2403|385/762|129/254||,AGC|mnv|HIGH|Gpx4|625249|transcript|ENSMUST00000105372.7|Coding|3/7|c.217_219delTGAinsAGC|p.(*73S)|361/2952|217/594|73/198||,AGC|mnv|HIGH|Gpx4|625249|transcript|ENSMUST00000183037.1|Coding|2/6|c.97_99delTGAinsAGC|p.(*33S)|182/1930|97/474|33/158||,AGC|non_coding_transcript_exon_variant|LOW|Gpx4|625249|transcript|ENSMUST00000145703.1|Noncoding|3/4|n.269_271delTGAinsAGC||269/1073||||,AGC|non_coding_transcript_intron_variant|LOW|Gpx4|625249|transcript|ENSMUST00000144698.7|Noncoding|3/6|n.388+129_388+131delTGAinsAGC||389/9274||||;allele_of_genes="MGI:104767";alleles="MGI:5769979";geneLevelConsequence="stop_lost";hgvs_nomenclature="NC_000076.6:g.80054737_80054739delinsAGC";impact="HIGH";soTerm="MNV";strain_id="MGI:5655764";strain_name="(C57BL/6J_x_129S6/SvEvTac)F1";symbol="Gpx4<sup>tm4Marc</sup>";symbol_text="Gpx4<tm4Marc>"
10 80709201 NC_000076.6:g.80709202_80709210del CTGTAGCAGG C . . ANN=C|disruptive_inframe_deletion&splice_region_variant|MODERATE|Ap3d1|11776|transcript|ENSMUST00000020420.8|Coding|28/31|c.3293_3301del|p.(P1098_S1101delinsR)|3566/35309|3293/3600|1098/1200||,C|splice_region_variant&3_prime_UTR_exon_variant|LOW|Ap3d1|11776|transcript|ENSMUST00000218610.1|Coding|6/7|c.*359_*367del|p.(%3D)|710/1989|352/351|118/117||;allele_of_genes="MGI:107734";alleles="MGI:5484771";geneLevelConsequence="inframe_deletion,splice_region_variant";hgvs_nomenclature="NC_000076.6:g.80709202_80709210del";impact="MODERATE";soTerm="deletion";strain_id="MGI:5658717";strain_name="(B6(129P2)-shsn/GrsrJ_x_BALB/cJ)F2";symbol="Ap3d1<sup>mh-4J</sup>";symbol_text="Ap3d1<mh-4J>"
10 80730042 NC_000076.6:g.80730042G>T G T . . ANN=T|stop_gained|HIGH|Ap3d1|11776|transcript|ENSMUST00000219356.1|Coding|4/9|c.270C>A|p.(C90*)|270/19059|270/367|90/122||,T|missense_variant|MODERATE|Ap3d1|11776|transcript|ENSMUST00000020420.8|Coding|4/31|c.290C>A|p.(A97E)|563/35309|290/3600|97/1200||;allele_of_genes="MGI:107734";alleles="MGI:5528707";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.80730042G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ap3d1<sup>m1Btlr</sup>";symbol_text="Ap3d1<m1Btlr>"
10 93497536 NC_000076.6:g.93497536G>A G A . . ANN=A|missense_variant|MODERATE|Hal|15109|transcript|ENSMUST00000129421.7|Coding|11/20|c.965G>A|p.(R322Q)|1328/30537|965/1974|322/658||,A|3_prime_UTR_exon_variant|LOW|Hal|15109|transcript|ENSMUST00000016031.13|Coding|10/19|c.*394G>A|p.(%3D)|1226/27662|505/504|169/168||,A|non_coding_transcript_exon_variant|LOW|Hal|15109|transcript|ENSMUST00000132624.1|Noncoding|2/5|n.288G>A||288/4253||||;allele_of_genes="MGI:96010";alleles="MGI:1856300";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.93497536G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651352";strain_name="partly_inbred_Peru_mice";symbol="Hal<sup>his</sup>";symbol_text="Hal<his>"
10 95413081 NC_000076.6:g.95413081C>A C A . . ANN=A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000020215.15|Coding|3/3|c.169G>T|p.(E57*)|631/5368|169/597|57/199||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000119917.1|Coding|2/2|c.169G>T|p.(E57*)|483/2668|169/597|57/199||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000129942.1|Coding|3/3|c.169G>T|p.(E57*)|604/3151|169/188|57/62||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000135822.7|Coding|3/3|c.169G>T|p.(E57*)|426/4171|169/240|57/80||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000150432.7|Coding|3/3|c.169G>T|p.(E57*)|562/2447|169/212|57/70||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000170690.7|Coding|3/3|c.169G>T|p.(E57*)|604/4723|169/597|57/199||,A|stop_gained|HIGH|Socs2|216233|transcript|ENSMUST00000172070.7|Coding|3/3|c.169G>T|p.(E57*)|562/3995|169/597|57/199||,A|stop_lost|HIGH|Socs2|.|transcript|ENSMUST00000139210.7|Coding|1/5|c.29G>T|p.(*10L)|29/27748|29/604|10/201||,A|non_coding_transcript_exon_variant|LOW|Socs2|216233|transcript|ENSMUST00000134918.1|Noncoding|2/2|n.213G>T||213/2408||||;allele_of_genes="MGI:1201787";alleles="MGI:5640786";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000076.6:g.95413081C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Socs2<sup>m1Btlr</sup>";symbol_text="Socs2<m1Btlr>"
10 100500272 NC_000076.6:g.100500272T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cep290|216274|transcript|ENSMUST00000164751.1|Coding|12/52|c.1189+2T>C|p.?|1208/85367|1190/7440|397/2480||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cep290|216274|transcript|ENSMUST00000219765.1|Coding|11/51|c.1168+2T>C|p.?|1187/85367|1169/7419|390/2473||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Cep290|216274|transcript|ENSMUST00000220346.1|Coding|13/53|c.1189+2T>C|p.?|1413/86098|1190/7440|397/2480||;allele_of_genes="MGI:2384917";alleles="MGI:5438068";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000076.6:g.100500272T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cep290<sup>b2b1752Clo</sup>";symbol_text="Cep290<b2b1752Clo>"
10 100541779 NC_000076.6:g.100541779T>A T A . . ANN=A|stop_gained|HIGH|Cep290|216274|transcript|ENSMUST00000164751.1|Coding|34/53|c.4670T>A|p.(L1557*)|4688/85367|4670/7440|1557/2480||,A|stop_gained|HIGH|Cep290|216274|transcript|ENSMUST00000219765.1|Coding|33/52|c.4649T>A|p.(L1550*)|4667/85367|4649/7419|1550/2473||,A|stop_gained|HIGH|Cep290|216274|transcript|ENSMUST00000220346.1|Coding|35/54|c.4670T>A|p.(L1557*)|4893/86098|4670/7440|1557/2480||,A|non_coding_transcript_exon_variant|LOW|Cep290|216274|transcript|ENSMUST00000218703.1|Noncoding|2/4|n.247T>A||247/4677||||;allele_of_genes="MGI:2384917";alleles="MGI:5437082";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000076.6:g.100541779T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cep290<sup>b2b1454Clo</sup>";symbol_text="Cep290<b2b1454Clo>"
10 107543390 NC_000076.6:g.107543390A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ptprq|237523|transcript|ENSMUST00000050702.8|Coding|36/44|c.5945+2T>C|p.?|6125/203003|5946/6903|1982/2301||;allele_of_genes="MGI:1096349,MGI:1096349";alleles="MGI:5792035,MGI:5792035";geneLevelConsequence="splice_donor_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000076.6:g.107543390A>G";impact="HIGH,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ptprq<sup>mpc205H</sup>";symbol_text="Ptprq<mpc205H>"
10 121578690 NC_000076.6:g.121578690A>T A T . . ANN=T|missense_variant|MODERATE|Tbk1|56480|transcript|ENSMUST00000020316.3|Coding|3/21|c.118T>A|p.(F40I)|270/40333|118/2190|40/730||,T|missense_variant|MODERATE|Tbk1|56480|transcript|ENSMUST00000219400.1|Coding|3/21|c.118T>A|p.(F40I)|260/40318|118/366|40/122||,T|5_prime_UTR_exon_variant|LOW|Tbk1|56480|transcript|ENSMUST00000219493.1|Coding|2/4|c.-39T>A|p.(%3D)|78/14841|1/326|1/108||;allele_of_genes="MGI:1929658";alleles="MGI:5442100";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.121578690A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbk1<sup>M1Btlr</sup>";symbol_text="Tbk1<M1Btlr>"
10 127541013 NC_000076.6:g.127541013A>G A G . . ANN=G|missense_variant|MODERATE|Lrp1|16971|transcript|ENSMUST00000049149.14|Coding|82/89|c.12694T>C|p.(C4232R)|13155/82988|12694/13638|4232/4546||;allele_of_genes="MGI:96828";alleles="MGI:5437079";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.127541013A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lrp1<sup>b2b1554Clo</sup>";symbol_text="Lrp1<b2b1554Clo>"
10 128039239 NC_000076.6:g.128039239T>G T G . . ANN=G|missense_variant|MODERATE|Naca|17938|transcript|ENSMUST00000092048.12|Coding|3/9|c.139T>G|p.(S47A)|190/13003|139/6564|47/2188||,G|coding_transcript_intron_variant|LOW|Naca|17938|transcript|ENSMUST00000073868.8|Coding|2/7|c.70+2679T>G|p.(%3D)|182/13059|71/648|24/216||;allele_of_genes="MGI:106095";alleles="MGI:4421140";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000076.6:g.128039239T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Naca<sup>tm1.1Star</sup>";symbol_text="Naca<tm1.1Star>"
11 3531326 NC_000077.6:g.3531326G>T G T . . ANN=T|missense_variant|MODERATE|Smtn|29856|transcript|ENSMUST00000020721.14|Coding|7/21|c.668C>A|p.(A223D)|912/21770|668/2766|223/922||,T|missense_variant|MODERATE|Smtn|29856|transcript|ENSMUST00000075118.9|Coding|7/20|c.668C>A|p.(A223D)|859/21717|668/2772|223/924||,T|missense_variant|MODERATE|Smtn|29856|transcript|ENSMUST00000110011.7|Coding|6/20|c.668C>A|p.(A223D)|693/19876|668/2841|223/947||,T|missense_variant|MODERATE|Smtn|29856|transcript|ENSMUST00000170588.7|Coding|8/22|c.668C>A|p.(A223D)|963/21770|668/2766|223/922||,T|non_coding_transcript_exon_variant|LOW|Gm11946|.|transcript|ENSMUST00000123459.1|Noncoding|1/4|n.379G>T||379/5909||||,T|non_coding_transcript_exon_variant|LOW|Smtn|29856|transcript|ENSMUST00000154861.7|Noncoding|8/22|n.925C>A||925/21730||||,T|non_coding_transcript_intron_variant|LOW|Gm11946|.|transcript|ENSMUST00000128806.1|Noncoding|1/3|n.119+1051G>T||120/6278||||;allele_of_genes="MGI:1354727,MGI:1354727";alleles="MGI:6114749,MGI:6114749";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000077.6:g.3531326G>T";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Smtn<sup>m1Btlr</sup>";symbol_text="Smtn<m1Btlr>"
11 5024406 NC_000077.6:g.5024406T>C T C . . ANN=C|missense_variant|MODERATE|Ap1b1|11764|transcript|ENSMUST00000009234.15|Coding|9/21|c.1094T>C|p.(V365A)|1348/55968|1094/2832|365/944||,C|missense_variant|MODERATE|Ap1b1|11764|transcript|ENSMUST00000101613.2|Coding|8/21|c.1013T>C|p.(V338A)|1039/33200|1013/2772|338/924||,C|missense_variant|MODERATE|Ap1b1|11764|transcript|ENSMUST00000109897.7|Coding|9/21|c.1013T>C|p.(V338A)|1267/55906|1013/2751|338/917||;allele_of_genes="MGI:1096368";alleles="MGI:5433323";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.5024406T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ap1b1<sup>b2b1660Clo</sup>";symbol_text="Ap1b1<b2b1660Clo>"
11 5902165 NC_000077.6:g.5902165A>T A T . . ANN=T|missense_variant|MODERATE|Gck|103988|transcript|ENSMUST00000102920.3|Coding|9/10|c.1173T>A|p.(N391K)|1655/49259|1173/1398|391/466||,T|missense_variant|MODERATE|Gck|103988|transcript|ENSMUST00000109822.7|Coding|9/11|c.1173T>A|p.(N391K)|1286/14305|1173/1398|391/466||,T|missense_variant|MODERATE|Gck|103988|transcript|ENSMUST00000109823.8|Coding|9/10|c.1173T>A|p.(N391K)|1286/14305|1173/1398|391/466||;allele_of_genes="MGI:1270854";alleles="MGI:5640861";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.5902165A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gck<sup>M1Btlr</sup>";symbol_text="Gck<M1Btlr>"
11 23516562 NC_000077.6:g.23516562T>A T A . . ANN=A|missense_variant|MODERATE|1700093K21Rik|67358|transcript|ENSMUST00000020527.11|Coding|5/5|c.469A>T|p.(T157S)|671/3021|469/591|157/197||,A|missense_variant|MODERATE|1700093K21Rik|67358|transcript|ENSMUST00000169264.7|Coding|5/5|c.469A>T|p.(T157S)|961/3740|469/591|157/197||;allele_of_genes="MGI:1914608";alleles="MGI:5618825";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.23516562T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="1700093K21Rik<sup>b2b3025Clo</sup>";symbol_text="1700093K21Rik<b2b3025Clo>"
11 32284111 NC_000077.6:g.32284111G>A G A . . ANN=A|missense_variant|MODERATE|Hba-a1|15122|transcript|ENSMUST00000093209.3|Coding|2/3|c.283G>A|p.(D95N)|479/955|283/429|95/143||,A|non_coding_transcript_exon_variant|LOW|Hba-a1|15122|transcript|ENSMUST00000142555.1|Noncoding|1/2|n.301G>A||301/628||||;allele_of_genes="MGI:96015";alleles="MGI:2451238";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.32284111G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Hba-a1<sup>tm1Shs</sup>";symbol_text="Hba-a1<tm1Shs>"
11 34229472 NC_000077.6:g.34229472A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|50/51|c.5281+2T>C|p.?|5351/557078|5282/5487|1761/1829||;allele_of_genes="MGI:2149010";alleles="MGI:6114020";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000077.6:g.34229472A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m7Btlr</sup>";symbol_text="Dock2<m7Btlr>"
11 34248572 NC_000077.6:g.34248572A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|43/51|c.4377+2T>A|p.?|4447/557078|4378/5487|1460/1829||;allele_of_genes="MGI:2149010";alleles="MGI:5014755";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000077.6:g.34248572A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m1Btlr</sup>";symbol_text="Dock2<m1Btlr>"
11 34248636 NC_000077.6:g.34248636G>A G A . . ANN=A|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|43/52|c.4315C>T|p.(Q1439*)|4384/557078|4315/5487|1439/1829||;allele_of_genes="MGI:2149010";alleles="MGI:5461202";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000077.6:g.34248636G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m3Btlr</sup>";symbol_text="Dock2<m3Btlr>"
11 34248640 NC_000077.6:g.34248640A>T A T . . ANN=T|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|43/52|c.4311T>A|p.(Y1437*)|4380/557078|4311/5487|1437/1829||;allele_of_genes="MGI:2149010";alleles="MGI:5563490";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000077.6:g.34248640A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Dock2<sup>m2Anu</sup>";symbol_text="Dock2<m2Anu>"
11 34258126 NC_000077.6:g.34258126A>T A T . . ANN=T|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|39/52|c.3921T>A|p.(Y1307*)|3990/557078|3921/5487|1307/1829||;allele_of_genes="MGI:2149010";alleles="MGI:5563488";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000077.6:g.34258126A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5566620";strain_name="C57BL/6NCrlAnu";symbol="Dock2<sup>m3Anu</sup>";symbol_text="Dock2<m3Anu>"
11 34258184 NC_000077.6:g.34258184A>T A T . . ANN=T|coding_transcript_intron_variant|LOW|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|38/51|c.3874-11T>A|p.(%3D)|3943/557078|3874/5487|1292/1829||;allele_of_genes="MGI:2149010";alleles="MGI:5049870";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000077.6:g.34258184A>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m2Btlr</sup>";symbol_text="Dock2<m2Btlr>"
11 34262445 NC_000077.6:g.34262445T>G T G . . ANN=G|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|37/52|c.3695A>C|p.(D1232A)|3764/557078|3695/5487|1232/1829||;allele_of_genes="MGI:2149010";alleles="MGI:6305853";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.34262445T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>M16Btlr</sup>";symbol_text="Dock2<M16Btlr>"
11 34294170 NC_000077.6:g.34294170T>G T G . . ANN=G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|31/51|c.3171-2A>C|p.?|3240/557078|3171/5487|1057/1829||,G|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Dock2|94176|transcript|ENSMUST00000101365.8|Coding|31/34|c.3171-2A>C|p.?|3240/510848|3171/3528|1057/1176||;allele_of_genes="MGI:2149010";alleles="MGI:5806434";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000077.6:g.34294170T>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m6Btlr</sup>";symbol_text="Dock2<m6Btlr>"
11 34514481 NC_000077.6:g.34514481C>A C A . . ANN=A|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|23/52|c.2323G>T|p.(E775*)|2392/557078|2323/5487|775/1829||,A|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000101364.2|Coding|3/9|c.184G>T|p.(E62*)|218/326521|184/888|62/296||,A|stop_gained|HIGH|Dock2|94176|transcript|ENSMUST00000101365.8|Coding|23/35|c.2323G>T|p.(E775*)|2392/510848|2323/3528|775/1176||,A|3_prime_UTR_exon_variant|LOW|Dock2|94176|transcript|ENSMUST00000143540.7|Coding|22/26|c.*23G>T|p.(%3D)|2291/346581|2200/2199|734/733||,A|non_coding_transcript_exon_variant|LOW|Dock2|94176|transcript|ENSMUST00000154178.1|Noncoding|23/27|n.2383G>T||2383/346572||||;allele_of_genes="MGI:2149010";alleles="MGI:5563487";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000077.6:g.34514481C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Dock2<sup>m1Anu</sup>";symbol_text="Dock2<m1Anu>"
11 34689760 NC_000077.6:g.34689760A>T A T . . ANN=T|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|20/52|c.1982T>A|p.(M661K)|2051/557078|1982/5487|661/1829||,T|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000101365.8|Coding|20/35|c.1982T>A|p.(M661K)|2051/510848|1982/3528|661/1176||,T|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000143540.7|Coding|20/26|c.1982T>A|p.(M661K)|2051/346581|1982/2199|661/733||,T|non_coding_transcript_exon_variant|LOW|Dock2|94176|transcript|ENSMUST00000154178.1|Noncoding|20/27|n.2042T>A||2042/346572||||;allele_of_genes="MGI:2149010";alleles="MGI:5695264";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.34689760A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m5Btlr</sup>";symbol_text="Dock2<m5Btlr>"
11 34708793 NC_000077.6:g.34708793T>C T C . . ANN=C|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000093193.11|Coding|10/52|c.958A>G|p.(R320G)|1027/557078|958/5487|320/1829||,C|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000101365.8|Coding|10/35|c.958A>G|p.(R320G)|1027/510848|958/3528|320/1176||,C|missense_variant|MODERATE|Dock2|94176|transcript|ENSMUST00000143540.7|Coding|10/26|c.958A>G|p.(R320G)|1027/346581|958/2199|320/733||,C|non_coding_transcript_exon_variant|LOW|Dock2|94176|transcript|ENSMUST00000154178.1|Noncoding|10/27|n.1018A>G||1018/346572||||;allele_of_genes="MGI:2149010";alleles="MGI:5640757";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.34708793T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock2<sup>m4Btlr</sup>";symbol_text="Dock2<m4Btlr>"
11 35686479 NC_000077.6:g.35686479G>T G T . . ANN=T|missense_variant|MODERATE|Slit3|20564|transcript|ENSMUST00000069837.3|Coding|31/36|c.3538G>T|p.(A1180S)|3829/587284|3538/4572|1180/1524||;allele_of_genes="MGI:1315202";alleles="MGI:5560156";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.35686479G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slit3<sup>b2b2362.1Clo</sup>";symbol_text="Slit3<b2b2362.1Clo>"
11 50200938 NC_000077.6:g.50200938G>A G A . . ANN=A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000015981.11|Coding|8/8|c.1067C>T|p.(P356L)|1101/11426|1067/1215|356/405||,A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000102774.10|Coding|8/8|c.1181C>T|p.(P394L)|1251/10676|1181/1329|394/443||,A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000136936.1|Coding|3/3|c.182C>T|p.(P61L)|182/2788|182/330|61/110||,A|coding_transcript_intron_variant|LOW|Sqstm1|18412|transcript|ENSMUST00000143379.1|Coding|6/6|c.957-26C>T|p.(%3D)|965/10155|957/1149|319/383||;allele_of_genes="MGI:107931,MGI:107931,MGI:107931,MGI:107931";alleles="MGI:3817496,MGI:3817496,MGI:3817496,MGI:3817496";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.50200938G>A";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3050593";strain_name="129S/SvEv";symbol="Sqstm1<sup>tm1Jjw</sup>";symbol_text="Sqstm1<tm1Jjw>"
11 50200938 NC_000077.6:g.50200938G>A G A . . ANN=A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000015981.11|Coding|8/8|c.1067C>T|p.(P356L)|1101/11426|1067/1215|356/405||,A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000102774.10|Coding|8/8|c.1181C>T|p.(P394L)|1251/10676|1181/1329|394/443||,A|missense_variant|MODERATE|Sqstm1|18412|transcript|ENSMUST00000136936.1|Coding|3/3|c.182C>T|p.(P61L)|182/2788|182/330|61/110||,A|coding_transcript_intron_variant|LOW|Sqstm1|18412|transcript|ENSMUST00000143379.1|Coding|6/6|c.957-26C>T|p.(%3D)|965/10155|957/1149|319/383||;allele_of_genes="MGI:107931,MGI:107931,MGI:107931,MGI:107931";alleles="MGI:5056451,MGI:5056451,MGI:5056451,MGI:5056451";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.50200938G>A";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Sqstm1<sup>tm1.1Sral</sup>";symbol_text="Sqstm1<tm1.1Sral>"
11 50952112 NC_000077.6:g.50952112A>G A G . . ANN=G|missense_variant|MODERATE|Prop1|19127|transcript|ENSMUST00000051159.2|Coding|2/3|c.247T>C|p.(S83P)|608/2960|247/672|83/224||,G|non_coding_transcript_exon_variant|LOW|Prop1|19127|transcript|ENSMUST00000159179.1|Noncoding|1/2|n.343T>C||343/1263||||;allele_of_genes="MGI:109330";alleles="MGI:1856842";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.50952112A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651375";strain_name="Goodale_large_mice_x_pink-eyed_stock";symbol="Prop1<sup>df</sup>";symbol_text="Prop1<df>"
11 53683360 NC_000077.6:g.53683360_53683363delinsCCGC GACT CCGC . . ANN=CCGC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|13/25|c.2046_2049delAGTCinsGCGG|p.(V683R)|2310/57801|2046/3939|682/1313||,CCGC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|12/12|c.1863_1866delAGTCinsGCGG|p.(V622R)|2103/24041|1863/1971|621/657||,CCGC|3_prime_UTR_exon_variant|LOW|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|12/18|c.*232_*235delAGTCinsGCGG|p.(%3D)|2152/32565|1657/1656|553/552||;allele_of_genes="MGI:109292";alleles="MGI:5614071";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.53683360_53683363delinsCCGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Rad50<sup>tm5Jpt</sup>";symbol_text="Rad50<tm5Jpt>"
11 53683364 NC_000077.6:g.53683364_53683365delinsTC GG TC . . ANN=TC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|13/25|c.2044_2045delCCinsGA|p.(P682E)|2308/57801|2044/3939|682/1313||,TC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|12/12|c.1861_1862delCCinsGA|p.(P621E)|2101/24041|1861/1971|621/657||,TC|3_prime_UTR_exon_variant|LOW|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|12/18|c.*230_*231delCCinsGA|p.(%3D)|2150/32565|1657/1656|553/552||;allele_of_genes="MGI:109292,MGI:109292,MGI:109292,MGI:109292";alleles="MGI:5614068,MGI:5614068,MGI:5614068,MGI:5614068";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.53683364_53683365delinsTC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Rad50<sup>tm4Jpt</sup>";symbol_text="Rad50<tm4Jpt>"
11 53683364 NC_000077.6:g.53683364_53683365delinsTC GG TC . . ANN=TC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|13/25|c.2044_2045delCCinsGA|p.(P682E)|2308/57801|2044/3939|682/1313||,TC|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|12/12|c.1861_1862delCCinsGA|p.(P621E)|2101/24041|1861/1971|621/657||,TC|3_prime_UTR_exon_variant|LOW|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|12/18|c.*230_*231delCCinsGA|p.(%3D)|2150/32565|1657/1656|553/552||;allele_of_genes="MGI:109292,MGI:109292,MGI:109292,MGI:109292";alleles="MGI:5614069,MGI:5614069,MGI:5614069,MGI:5614069";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.53683364_53683365delinsTC";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Rad50<sup>tm4.1Jpt</sup>";symbol_text="Rad50<tm4.1Jpt>"
11 53683373 NC_000077.6:g.53683373_53683374delinsCG GA CG . . ANN=CG|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|13/25|c.2035_2036delTCinsCG|p.(S679R)|2299/57801|2035/3939|679/1313||,CG|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|12/12|c.1852_1853delTCinsCG|p.(S618R)|2092/24041|1852/1971|618/657||,CG|3_prime_UTR_exon_variant|LOW|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|12/18|c.*221_*222delTCinsCG|p.(%3D)|2141/32565|1657/1656|553/552||;allele_of_genes="MGI:109292,MGI:109292,MGI:109292,MGI:109292";alleles="MGI:5614068,MGI:5614068,MGI:5614068,MGI:5614068";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.53683373_53683374delinsCG";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Rad50<sup>tm4Jpt</sup>";symbol_text="Rad50<tm4Jpt>"
11 53683373 NC_000077.6:g.53683373_53683374delinsCG GA CG . . ANN=CG|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|13/25|c.2035_2036delTCinsCG|p.(S679R)|2299/57801|2035/3939|679/1313||,CG|mnv|HIGH|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|12/12|c.1852_1853delTCinsCG|p.(S618R)|2092/24041|1852/1971|618/657||,CG|3_prime_UTR_exon_variant|LOW|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|12/18|c.*221_*222delTCinsCG|p.(%3D)|2141/32565|1657/1656|553/552||;allele_of_genes="MGI:109292,MGI:109292,MGI:109292,MGI:109292";alleles="MGI:5614069,MGI:5614069,MGI:5614069,MGI:5614069";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.53683373_53683374delinsCG";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Rad50<sup>tm4.1Jpt</sup>";symbol_text="Rad50<tm4.1Jpt>"
11 53706991 NC_000077.6:g.53706991T>A T A . . ANN=A|missense_variant|MODERATE|Rad50|19360|transcript|ENSMUST00000020649.13|Coding|1/25|c.65A>T|p.(K22M)|329/57801|65/3939|22/1313||,A|missense_variant|MODERATE|Rad50|19360|transcript|ENSMUST00000124352.1|Coding|1/12|c.65A>T|p.(K22M)|305/24041|65/1971|22/657||,A|missense_variant|MODERATE|Rad50|19360|transcript|ENSMUST00000128483.7|Coding|1/18|c.65A>T|p.(K22M)|329/32565|65/1656|22/552||;allele_of_genes="MGI:109292";alleles="MGI:2387857";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.53706991T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164544";strain_name="129S7/SvEvBrd-Hprt<b-m2>";symbol="Rad50<sup>tm2Jpt</sup>";symbol_text="Rad50<tm2Jpt>"
11 60487425 NC_000077.6:g.60487425G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000071880.8|Coding|10/65|c.4158+1G>A|p.?|4448/59031|4159/10536|1387/3512||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000081823.11|Coding|9/63|c.597+1G>A|p.?|686/59031|598/6921|200/2307||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000094135.8|Coding|10/64|c.4158+1G>A|p.?|4448/59031|4159/10482|1387/3494||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000126522.3|Coding|8/47|c.653+1G>A|p.?|654/29798|654/5351|218/1783||;allele_of_genes="MGI:1261811";alleles="MGI:6114085";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000077.6:g.60487425G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myo15<sup>m2Btlr</sup>";symbol_text="Myo15<m2Btlr>"
11 60493068 NC_000077.6:g.60493068A>G A G . . ANN=G|missense_variant|MODERATE|Myo15|17910|transcript|ENSMUST00000071880.8|Coding|17/66|c.4940A>G|p.(D1647G)|5229/59031|4940/10536|1647/3512||,G|missense_variant|MODERATE|Myo15|17910|transcript|ENSMUST00000081823.11|Coding|16/64|c.1379A>G|p.(D460G)|1467/59031|1379/6921|460/2307||,G|missense_variant|MODERATE|Myo15|17910|transcript|ENSMUST00000094135.8|Coding|17/65|c.4940A>G|p.(D1647G)|5229/59031|4940/10482|1647/3494||,G|missense_variant|MODERATE|Myo15|17910|transcript|ENSMUST00000126522.3|Coding|15/48|c.1435A>G|p.(T479A)|1435/29798|1435/5351|479/1783||;allele_of_genes="MGI:1261811";alleles="MGI:5792022";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.60493068A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myo15<sup>mpc190H</sup>";symbol_text="Myo15<mpc190H>"
11 60520914 NC_000077.6:g.60520914T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000071880.8|Coding|61/65|c.9891+2T>C|p.?|10181/59031|9892/10536|3298/3512||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000081823.11|Coding|59/63|c.6276+2T>C|p.?|6365/59031|6277/6921|2093/2307||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Myo15|17910|transcript|ENSMUST00000094135.8|Coding|60/64|c.9837+2T>C|p.?|10127/59031|9838/10482|3280/3494||,C|non_coding_transcript_exon_variant|LOW|Myo15|17910|transcript|ENSMUST00000122825.1|Noncoding|12/12|n.1213T>C||1213/12453||||;allele_of_genes="MGI:1261811";alleles="MGI:5529106";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000077.6:g.60520914T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myo15<sup>m1Btlr</sup>";symbol_text="Myo15<m1Btlr>"
11 61490181 NC_000077.6:g.61490181T>C T C . . ANN=C|missense_variant|MODERATE|Mapk7|23939|transcript|ENSMUST00000079080.12|Coding|5/7|c.1801A>G|p.(T601A)|2094/5485|1801/2421|601/807||,C|missense_variant|MODERATE|Mapk7|23939|transcript|ENSMUST00000101085.8|Coding|4/6|c.1492A>G|p.(T498A)|2329/5455|1492/2112|498/704||,C|missense_variant|MODERATE|Mapk7|23939|transcript|ENSMUST00000108714.1|Coding|5/7|c.1594A>G|p.(T532A)|2144/5485|1594/2214|532/738||,C|coding_transcript_intron_variant|LOW|Mapk7|23939|transcript|ENSMUST00000153441.1|Coding|2/3|c.490+165A>G|p.(%3D)|491/1480|491/609|164/203||,C|non_coding_transcript_exon_variant|LOW|Mapk7|23939|transcript|ENSMUST00000125840.7|Noncoding|5/7|n.2209A>G||2209/5485||||,C|non_coding_transcript_exon_variant|LOW|Mapk7|23939|transcript|ENSMUST00000128478.1|Noncoding|2/2|n.2869A>G||2869/5455||||,C|non_coding_transcript_exon_variant|LOW|Mapk7|23939|transcript|ENSMUST00000152755.7|Noncoding|4/6|n.2330A>G||2330/5455||||;allele_of_genes="MGI:1346347";alleles="MGI:5554435";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.61490181T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mapk7<sup>b2b2346Clo</sup>";symbol_text="Mapk7<b2b2346Clo>"
11 68762858 NC_000077.6:g.68762858T>C T C . . ANN=C|missense_variant|MODERATE|Myh10|77579|transcript|ENSMUST00000018887.14|Coding|11/43|c.1084T>C|p.(S362P)|1186/124501|1084/6024|362/2008||,C|missense_variant|MODERATE|Myh10|77579|transcript|ENSMUST00000092984.5|Coding|10/41|c.1165T>C|p.(S389P)|1329/124309|1165/6042|389/2014||,C|missense_variant|MODERATE|Myh10|77579|transcript|ENSMUST00000102611.9|Coding|10/41|c.1054T>C|p.(S352P)|1353/124718|1054/5931|352/1977||,C|non_coding_transcript_exon_variant|LOW|Myh10|77579|transcript|ENSMUST00000155765.1|Noncoding|10/13|n.1114T>C||1114/77490||||;allele_of_genes="MGI:1930780";alleles="MGI:5552947";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.68762858T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Myh10<sup>b2b2437Clo</sup>";symbol_text="Myh10<b2b2437Clo>"
11 69089998 NC_000077.6:g.69089998T>A T A . . ANN=A|missense_variant|MODERATE|Vamp2|22318|transcript|ENSMUST00000021273.12|Coding|4/5|c.305T>A|p.(I102N)|441/3895|305/351|102/117||,A|missense_variant|MODERATE|Vamp2|22318|transcript|ENSMUST00000117780.1|Coding|4/4|c.305T>A|p.(I102N)|421/2181|305/492|102/164||,A|non_coding_transcript_exon_variant|LOW|Vamp2|22318|transcript|ENSMUST00000146847.1|Noncoding|2/2|n.307T>A||307/571||||,A|non_coding_transcript_exon_variant|LOW|Vamp2|22318|transcript|ENSMUST00000149559.1|Noncoding|3/3|n.866T>A||866/1508||||;allele_of_genes="MGI:1313277";alleles="MGI:5792085";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.69089998T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Vamp2<sup>rlss</sup>";symbol_text="Vamp2<rlss>"
11 69555870 NC_000077.6:g.69555870_69555873delinsAAAA TAAT AAAA . . ANN=AAAA|mnv|HIGH|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.1010_1013delATTAinsTTTT|p.(Y337_Y338delinsFF)|1402/6114|1010/1023|337/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555870_69555873delinsAAAA";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3.1Henk</sup>";symbol_text="Efnb3<tm3.1Henk>"
11 69555870 NC_000077.6:g.69555870_69555873delinsAAAA TAAT AAAA . . ANN=AAAA|mnv|HIGH|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.1010_1013delATTAinsTTTT|p.(Y337_Y338delinsFF)|1402/6114|1010/1023|337/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555870_69555873delinsAAAA";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="MNV";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3Henk</sup>";symbol_text="Efnb3<tm3Henk>"
11 69555915 NC_000077.6:g.69555915T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.968A>T|p.(Y323F)|1360/6114|968/1023|323/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555915T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2Henk</sup>";symbol_text="Efnb3<tm2Henk>"
11 69555915 NC_000077.6:g.69555915T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.968A>T|p.(Y323F)|1360/6114|968/1023|323/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555915T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2.1Henk</sup>";symbol_text="Efnb3<tm2.1Henk>"
11 69555915 NC_000077.6:g.69555915T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.968A>T|p.(Y323F)|1360/6114|968/1023|323/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555915T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3.1Henk</sup>";symbol_text="Efnb3<tm3.1Henk>"
11 69555915 NC_000077.6:g.69555915T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.968A>T|p.(Y323F)|1360/6114|968/1023|323/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555915T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3Henk</sup>";symbol_text="Efnb3<tm3Henk>"
11 69555930 NC_000077.6:g.69555930T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.953A>T|p.(Y318F)|1345/6114|953/1023|318/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555930T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2.1Henk</sup>";symbol_text="Efnb3<tm2.1Henk>"
11 69555930 NC_000077.6:g.69555930T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.953A>T|p.(Y318F)|1345/6114|953/1023|318/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555930T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2Henk</sup>";symbol_text="Efnb3<tm2Henk>"
11 69555930 NC_000077.6:g.69555930T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.953A>T|p.(Y318F)|1345/6114|953/1023|318/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555930T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3.1Henk</sup>";symbol_text="Efnb3<tm3.1Henk>"
11 69555930 NC_000077.6:g.69555930T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.953A>T|p.(Y318F)|1345/6114|953/1023|318/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555930T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3Henk</sup>";symbol_text="Efnb3<tm3Henk>"
11 69555951 NC_000077.6:g.69555951T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.932A>T|p.(Y311F)|1324/6114|932/1023|311/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477,MGI:3851477";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555951T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3Henk</sup>";symbol_text="Efnb3<tm3Henk>"
11 69555951 NC_000077.6:g.69555951T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.932A>T|p.(Y311F)|1324/6114|932/1023|311/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475,MGI:3851475";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555951T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2Henk</sup>";symbol_text="Efnb3<tm2Henk>"
11 69555951 NC_000077.6:g.69555951T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.932A>T|p.(Y311F)|1324/6114|932/1023|311/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478,MGI:3851478";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555951T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm3.1Henk</sup>";symbol_text="Efnb3<tm3.1Henk>"
11 69555951 NC_000077.6:g.69555951T>A T A . . ANN=A|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|5/5|c.932A>T|p.(Y311F)|1324/6114|932/1023|311/341||;allele_of_genes="MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196,MGI:109196";alleles="MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474,MGI:3851474";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.69555951T>A";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Efnb3<sup>tm2.1Henk</sup>";symbol_text="Efnb3<tm2.1Henk>"
11 69557283 NC_000077.6:g.69557283A>G A G . . ANN=G|missense_variant|MODERATE|Efnb3|13643|transcript|ENSMUST00000004036.5|Coding|2/5|c.332T>C|p.(L111P)|724/6114|332/1023|111/341||;allele_of_genes="MGI:109196";alleles="MGI:5474282";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.69557283A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Efnb3<sup>m1Btlr</sup>";symbol_text="Efnb3<m1Btlr>"
11 75657807 NC_000077.6:g.75657807_75657809delinsGGA TAC GGA . . ANN=GGA|mnv|HIGH|Myo1c|17913|transcript|ENSMUST00000069057.12|Coding|3/32|c.181_183delTACinsGGA|p.(Y61G)|367/22401|181/3087|61/1029||,GGA|mnv|HIGH|Myo1c|17913|transcript|ENSMUST00000102504.9|Coding|3/32|c.181_183delTACinsGGA|p.(Y61G)|479/21835|181/3087|61/1029||,GGA|mnv|HIGH|Myo1c|17913|transcript|ENSMUST00000102505.9|Coding|3/32|c.286_288delTACinsGGA|p.(Y96G)|472/23407|286/3192|96/1064||,GGA|mnv|HIGH|Myo1c|17913|transcript|ENSMUST00000108431.2|Coding|3/32|c.229_231delTACinsGGA|p.(Y77G)|540/18036|229/3135|77/1045||,GGA|non_coding_transcript_exon_variant|LOW|Myo1c|17913|transcript|ENSMUST00000151174.7|Noncoding|3/21|n.264_266delTACinsGGA||264/13439||||;allele_of_genes="MGI:106612";alleles="MGI:3603408";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.75657807_75657809delinsGGA";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Myo1c<sup>tm1Pgg</sup>";symbol_text="Myo1c<tm1Pgg>"
11 78172566 NC_000077.6:g.78172566A>G A G . . ANN=G|missense_variant|MODERATE|Nek8|140859|transcript|ENSMUST00000017549.12|Coding|3/15|c.371T>C|p.(I124T)|440/10570|371/2097|124/699||,G|5_prime_UTR_exon_variant|LOW|Nek8|140859|transcript|ENSMUST00000148154.2|Coding|3/5|c.-50T>C|p.(%3D)|309/5448|1/310|1/103||,G|non_coding_transcript_exon_variant|LOW|Nek8|140859|transcript|ENSMUST00000131015.7|Noncoding|3/13|n.392T>C||392/10107||||,G|non_coding_transcript_exon_variant|LOW|Nek8|140859|transcript|ENSMUST00000142812.7|Noncoding|3/4|n.379T>C||379/6624||||,G|non_coding_transcript_exon_variant|LOW|Nek8|140859|transcript|ENSMUST00000152611.7|Noncoding|3/14|n.376T>C||376/10506||||;allele_of_genes="MGI:1890646";alleles="MGI:5317588";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.78172566A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nek8<sup>b2b1449Clo</sup>";symbol_text="Nek8<b2b1449Clo>"
11 78361444 NC_000077.6:g.78361445_78361445delinsGCG T TGC . . ANN=TGC|frameshift_elongation|HIGH|Foxn1|15218|transcript|ENSMUST00000108294.1|Coding|7/9|c.1115_1116dup|p.(K373Afs*134)|1209/28982|1116/1947|372/649||;allele_of_genes="MGI:102949";alleles="MGI:1929717";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000077.6:g.78361445_78361445delinsGCG";impact="HIGH";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Foxn1<sup>nu-StL</sup>";symbol_text="Foxn1<nu-StL>"
11 78361603 NC_000077.6:g.78361603G>A G A . . ANN=A|missense_variant|MODERATE|Foxn1|15218|transcript|ENSMUST00000108294.1|Coding|7/9|c.958C>T|p.(R320C)|1051/28982|958/1947|320/649||;allele_of_genes="MGI:102949";alleles="MGI:1856502";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.78361603G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2162990";strain_name="101/HY";symbol="Foxn1<sup>nu-Y</sup>";symbol_text="Foxn1<nu-Y>"
11 78371199 NC_000077.6:g.78371200_78371206del AGCGCCCT A . . ANN=A|frameshift_truncation|HIGH|Foxn1|15218|transcript|ENSMUST00000108294.1|Coding|3/9|c.336_342del|p.(G113Sfs*187)|429/28982|336/1947|112/649||;allele_of_genes="MGI:102949";alleles="MGI:5464997";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000077.6:g.78371200_78371206del";impact="HIGH";soTerm="deletion";strain_id="MGI:2164701";strain_name="B6.SJL-Ptprc<a>_Pepc<b>/BoyJ";symbol="Foxn1<sup>nu-2J</sup>";symbol_text="Foxn1<nu-2J>"
11 78371201 NC_000077.6:g.78371202_78371203del CGC C . . ANN=C|frameshift_truncation|HIGH|Foxn1|15218|transcript|ENSMUST00000108294.1|Coding|3/9|c.341_342del|p.(R114Lfs*18)|434/28982|341/1947|114/649||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:102949";alleles="MGI:1856108";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000077.6:g.78371202_78371203del";impact="HIGH";soTerm="deletion";strain_id="MGI:5651321";strain_name="albino_stock";symbol="Foxn1<sup>nu</sup>";symbol_text="Foxn1<nu>"
11 80817609 NC_000077.6:g.80817609T>C T C . . ANN=C|missense_variant|MODERATE|Tmem98|103743|transcript|ENSMUST00000040865.8|Coding|5/7|c.404T>C|p.(I135T)|742/11859|404/681|135/227||;allele_of_genes="MGI:1923457,MGI:1923457";alleles="MGI:2178433,MGI:2178433";geneLevelConsequence="intron_variant,non_coding_transcript_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.80817609T>C";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:5651831";strain_name="(C3H/HeN_x_BALB/cAnN)F1";symbol="Tmem98<sup>Rwhs</sup>";symbol_text="Tmem98<Rwhs>"
11 80821315 NC_000077.6:g.80821315G>C G C . . ANN=C|missense_variant|MODERATE|Tmem98|103743|transcript|ENSMUST00000040865.8|Coding|7/7|c.577G>C|p.(A193P)|915/11859|577/681|193/227||;allele_of_genes="MGI:1923457,MGI:1923457,MGI:1923457,MGI:1923457";alleles="MGI:6355418,MGI:6355418,MGI:6355418,MGI:6355418";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.80821315G>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmem98<sup>em1Jkn</sup>";symbol_text="Tmem98<em1Jkn>"
11 80821315 NC_000077.6:g.80821315G>C G C . . ANN=C|missense_variant|MODERATE|Tmem98|103743|transcript|ENSMUST00000040865.8|Coding|7/7|c.577G>C|p.(A193P)|915/11859|577/681|193/227||;allele_of_genes="MGI:1923457,MGI:1923457,MGI:1923457,MGI:1923457";alleles="MGI:6355419,MGI:6355419,MGI:6355419,MGI:6355419";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.80821315G>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmem98<sup>em2Jkn</sup>";symbol_text="Tmem98<em2Jkn>"
11 83069564 NC_000077.6:g.83069564A>T A T . . ANN=T|missense_variant|MODERATE|Slfn2|20556|transcript|ENSMUST00000038038.7|Coding|2/2|c.368A>T|p.(H123L)|550/5567|368/1137|123/379||,T|non_coding_transcript_intron_variant|LOW|Gm20234|.|transcript|ENSMUST00000214134.1|Noncoding|1/2|n.168-1294T>A||168/5495||||;allele_of_genes="MGI:1313258";alleles="MGI:5789597";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.83069564A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slfn2<sup>m2Btlr</sup>";symbol_text="Slfn2<m2Btlr>"
11 83069600 NC_000077.6:g.83069600T>A T A . . ANN=A|missense_variant|MODERATE|Slfn2|20556|transcript|ENSMUST00000038038.7|Coding|2/2|c.404T>A|p.(I135N)|586/5567|404/1137|135/379||,A|non_coding_transcript_intron_variant|LOW|Gm20234|.|transcript|ENSMUST00000214134.1|Noncoding|1/2|n.168-1330A>T||168/5495||||;allele_of_genes="MGI:1313258";alleles="MGI:3850348";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.83069600T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slfn2<sup>m1Btlr</sup>";symbol_text="Slfn2<m1Btlr>"
11 83308253 NC_000077.6:g.83308253T>A T A . . ANN=A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000018875.12|Coding|2/22|c.16T>A|p.(Y6N)|394/102553|16/2856|6/952||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000065692.13|Coding|2/21|c.16T>A|p.(Y6N)|103/100239|16/2814|6/938||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000142680.1|Coding|3/4|c.16T>A|p.(Y6N)|569/13564|16/133|6/44||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000176430.7|Coding|2/21|c.16T>A|p.(Y6N)|143/95864|16/2829|6/943||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000176523.1|Coding|1/21|c.16T>A|p.(Y6N)|16/94407|16/2742|6/914||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000176944.7|Coding|2/6|c.16T>A|p.(Y6N)|69/34035|16/598|6/199||,A|non_coding_transcript_exon_variant|LOW|Ap2b1|71770|transcript|ENSMUST00000132178.2|Noncoding|2/12|n.174T>A||174/41878||||;allele_of_genes="MGI:1919020";alleles="MGI:5792018";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.83308253T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ap2b1<sup>mpc187H</sup>";symbol_text="Ap2b1<mpc187H>"
11 83341345 NC_000077.6:g.83341345T>A T A . . ANN=A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000018875.12|Coding|11/22|c.1343T>A|p.(M448K)|1721/102553|1343/2856|448/952||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000065692.13|Coding|11/21|c.1343T>A|p.(M448K)|1430/100239|1343/2814|448/938||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000176430.7|Coding|11/21|c.1343T>A|p.(M448K)|1470/95864|1343/2829|448/943||,A|missense_variant|MODERATE|Ap2b1|71770|transcript|ENSMUST00000176523.1|Coding|10/21|c.1229T>A|p.(M410K)|1229/94407|1229/2742|410/914||,A|non_coding_transcript_exon_variant|LOW|Ap2b1|71770|transcript|ENSMUST00000132178.2|Noncoding|11/12|n.1501T>A||1501/41878||||;allele_of_genes="MGI:1919020";alleles="MGI:5552944";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.83341345T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ap2b1<sup>b2b2321Clo</sup>";symbol_text="Ap2b1<b2b2321Clo>"
11 94093624 NC_000077.6:g.94093624C>A C A . . ANN=A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000024979.14|Coding|16/27|c.1908C>A|p.(C636*)|1908/81719|1908/3510|636/1170||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000041956.13|Coding|18/29|c.2322C>A|p.(C774*)|2490/129983|2322/3924|774/1308||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000075695.12|Coding|16/27|c.1905C>A|p.(C635*)|2065/81876|1905/3507|635/1169||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000092777.10|Coding|16/27|c.1908C>A|p.(C636*)|2068/81876|1908/3510|636/1170||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000103168.9|Coding|15/26|c.1893C>A|p.(C631*)|1990/81818|1893/3495|631/1165||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000132079.7|Coding|10/16|c.1272C>A|p.(C424*)|1519/62638|1272/2118|424/706||,A|stop_gained|HIGH|Spag9|70834|transcript|ENSMUST00000153076.1|Coding|9/21|c.1065C>A|p.(C355*)|1065/43298|1065/2706|355/902||,A|missense_variant|MODERATE|Spag9|70834|transcript|ENSMUST00000156019.7|Coding|16/18|c.1871C>A|p.(A624E)|1871/54311|1871/2324|624/774||,A|non_coding_transcript_exon_variant|LOW|Spag9|70834|transcript|ENSMUST00000138154.1|Noncoding|10/10|n.1562C>A||1562/22567||||;allele_of_genes="MGI:1918084";alleles="MGI:4442906";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000077.6:g.94093624C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Spag9<sup>m1Btlr</sup>";symbol_text="Spag9<m1Btlr>"
11 99145277 NC_000077.6:g.99145277A>T A T . . ANN=T|missense_variant|MODERATE|Ccr7|12775|transcript|ENSMUST00000103134.3|Coding|3/3|c.818T>A|p.(I273K)|897/10882|818/1137|273/379||;allele_of_genes="MGI:103011";alleles="MGI:5640785";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.99145277A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ccr7<sup>m1Btlr</sup>";symbol_text="Ccr7<m1Btlr>"
11 99322630 NC_000077.6:g.99322630A>G A G . . ANN=G|missense_variant|MODERATE|Krt25|70810|transcript|ENSMUST00000038004.2|Coding|1/8|c.262T>C|p.(S88P)|322/7436|262/1341|88/447||;allele_of_genes="MGI:1918060,MGI:1918060";alleles="MGI:3800570,MGI:3800570";geneLevelConsequence="splice_region_variant,intron_variant,non_coding_transcript_variant,missense_variant";hgvs_nomenclature="NC_000077.6:g.99322630A>G";impact="LOW,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Krt25<sup>M2Btlr</sup>";symbol_text="Krt25<M2Btlr>"
11 99322635 NC_000077.6:g.99322635A>T A T . . ANN=T|missense_variant|MODERATE|Krt25|70810|transcript|ENSMUST00000038004.2|Coding|1/8|c.257T>A|p.(L86Q)|317/7436|257/1341|86/447||;allele_of_genes="MGI:1918060,MGI:1918060";alleles="MGI:3799750,MGI:3799750";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000077.6:g.99322635A>T";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Krt25<sup>M1Btlr</sup>";symbol_text="Krt25<M1Btlr>"
11 100011939 NC_000077.6:g.100011939A>T A T . . ANN=T|missense_variant|MODERATE|Krt33a|71888|transcript|ENSMUST00000018399.2|Coding|6/7|c.1058T>A|p.(I353N)|1123/5018|1058/1215|353/405||;allele_of_genes="MGI:1919138";alleles="MGI:3834208";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.100011939A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Krt33a<sup>Plsh-3Btlr</sup>";symbol_text="Krt33a<Plsh-3Btlr>"
11 100015850 NC_000077.6:g.100015850A>G A G . . ANN=G|missense_variant|MODERATE|Krt33a|71888|transcript|ENSMUST00000018399.2|Coding|1/7|c.298T>C|p.(C100R)|363/5018|298/1215|100/405||;allele_of_genes="MGI:1919138";alleles="MGI:3800563";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.100015850A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Krt33a<sup>Plsh-2Btlr</sup>";symbol_text="Krt33a<Plsh-2Btlr>"
11 101186764 NC_000077.6:g.101186764A>G A G . . ANN=G|missense_variant|MODERATE|Cntnap1|53321|transcript|ENSMUST00000103109.3|Coding|19/24|c.3251A>G|p.(E1084G)|3468/14684|3251/4158|1084/1386||;allele_of_genes="MGI:1858201";alleles="MGI:6113891";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.101186764A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cntnap1<sup>M1Btlr</sup>";symbol_text="Cntnap1<M1Btlr>"
11 101255001 NC_000077.6:g.101255001G>A G A . . ANN=A|splice_region_variant&3_prime_UTR_intron_variant|LOW|Ramp2|28084|transcript|ENSMUST00000128260.8|Coding|5/7|c.*303+5G>A|p.(%3D)|677/13156|313/312|105/104||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000007533.14|Coding|3/5|c.253+5G>A|p.?|302/4343|254/447|85/149||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000042477.12|Coding|3/5|c.253+5G>A|p.?|302/5843|254/531|85/177||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000100414.11|Coding|3/5|c.253+5G>A|p.?|280/5817|254/519|85/173||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000107280.10|Coding|3/5|c.277+5G>A|p.?|298/5589|278/555|93/185||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000121331.1|Coding|2/4|c.109+5G>A|p.?|479/5304|110/387|37/129||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000123529.1|Noncoding|2/3|n.467+5G>A||468/5447||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Vps25|28084|transcript|ENSMUST00000144306.8|Coding|3/4|c.253+5G>A|p.?|279/5187|254/276|85/92||;allele_of_genes="MGI:106354,MGI:106354";alleles="MGI:5751483,MGI:5751483";geneLevelConsequence="splice_region_variant,intron_variant,splice_region_variant,intron_variant";hgvs_nomenclature="NC_000077.6:g.101255001G>A";impact="LOW,LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Vps25<sup>m1Lis</sup>";symbol_text="Vps25<m1Lis>"
11 101523852 NC_000077.6:g.101523852_101523853delinsGC CT GC . . ANN=GC|mnv|HIGH|Brca1|12189|transcript|ENSMUST00000017290.10|Coding|10/23|c.3454_3455delAGinsGC|p.(S1152A)|3584/63116|3454/5439|1152/1813||;allele_of_genes="MGI:104537";alleles="MGI:4418211";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.101523852_101523853delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Brca1<sup>tm5.1Cxd</sup>";symbol_text="Brca1<tm5.1Cxd>"
11 101524396 NC_000077.6:g.101524396A>C A C . . ANN=C|missense_variant|MODERATE|Brca1|.|transcript|ENSMUST00000191198.1|Coding|2/2|c.328T>G|p.(S110A)|328/666|328/531|110/177||,C|missense_variant|MODERATE|Brca1|12189|transcript|ENSMUST00000017290.10|Coding|10/23|c.2911T>G|p.(S971A)|3041/63116|2911/5439|971/1813||,C|splice_region_variant&non_coding_transcript_exon_variant|LOW|Brca1|.|transcript|ENSMUST00000188168.1|Noncoding|2/2|n.663T>G||663/1000||||;allele_of_genes="MGI:104537";alleles="MGI:3513253";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.101524396A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Brca1<sup>tm3Cxd</sup>";symbol_text="Brca1<tm3Cxd>"
11 101535559 NC_000077.6:g.101535559A>C A C . . ANN=C|missense_variant|MODERATE|Brca1|12189|transcript|ENSMUST00000017290.10|Coding|4/23|c.181T>G|p.(C61G)|311/63116|181/5439|61/1813||,C|missense_variant|MODERATE|Brca1|12189|transcript|ENSMUST00000142086.2|Coding|4/9|c.181T>G|p.(C61G)|387/26449|181/228|61/76||,C|missense_variant|MODERATE|Brca1|12189|transcript|ENSMUST00000190862.1|Coding|3/5|c.40T>G|p.(C14G)|158/19500|40/237|14/79||;allele_of_genes="MGI:104537";alleles="MGI:5307254";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.101535559A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Brca1<sup>tm1.1Jjon</sup>";symbol_text="Brca1<tm1.1Jjon>"
11 103237608 NC_000077.6:g.103237608G>A G A . . ANN=A|stop_gained|HIGH|Map3k14|53859|transcript|ENSMUST00000021324.2|Coding|6/16|c.1186C>T|p.(R396*)|1340/47711|1186/2829|396/943||,A|non_coding_transcript_exon_variant|LOW|Map3k14|53859|transcript|ENSMUST00000152300.1|Noncoding|4/4|n.2383C>T||2383/5242||||;allele_of_genes="MGI:1858204,MGI:1858204";alleles="MGI:4357692,MGI:4357692";geneLevelConsequence="stop_gained,non_coding_transcript_exon_variant";hgvs_nomenclature="NC_000077.6:g.103237608G>A";impact="HIGH,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Map3k14<sup>m1Btlr</sup>";symbol_text="Map3k14<m1Btlr>"
11 114750459 NC_000077.6:g.114750459T>A T A . . ANN=A|missense_variant|MODERATE|Dnaic2|432611|transcript|ENSMUST00000069325.13|Coding|9/13|c.1109T>A|p.(L370H)|1493/30478|1109/1872|370/624||,A|missense_variant|MODERATE|Dnaic2|432611|transcript|ENSMUST00000092469.10|Coding|9/13|c.1109T>A|p.(L370H)|1418/28742|1109/1872|370/624||,A|missense_variant|MODERATE|Dnaic2|432611|transcript|ENSMUST00000141762.2|Coding|8/11|c.1109T>A|p.(L370H)|1127/21568|1109/1686|370/562||,A|non_coding_transcript_exon_variant|LOW|Dnaic2|432611|transcript|ENSMUST00000136403.7|Noncoding|8/11|n.1076T>A||1076/26937||||,A|non_coding_transcript_exon_variant|LOW|Dnaic2|432611|transcript|ENSMUST00000144872.1|Noncoding|6/8|n.796T>A||796/17029||||;allele_of_genes="MGI:2685574";alleles="MGI:5619080";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.114750459T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnaic2<sup>b2b3405Clo</sup>";symbol_text="Dnaic2<b2b3405Clo>"
11 115269462 NC_000077.6:g.115269462C>T C T . . ANN=T|missense_variant|MODERATE|Fdxr|14149|transcript|ENSMUST00000021078.2|Coding|10/12|c.1166G>A|p.(R389Q)|1329/9027|1166/1485|389/495||,T|non_coding_transcript_intron_variant|LOW|Fdxr|14149|transcript|ENSMUST00000155130.7|Noncoding|8/9|n.897+235G>A||898/8891||||;allele_of_genes="MGI:104724";alleles="MGI:5581449";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.115269462C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4999582";strain_name="B6_129S-Gt(ROSA)26Sor<tm38(CAG-GCaMP3)Hze>/J";symbol="Fdxr<sup>m1J</sup>";symbol_text="Fdxr<m1J>"
11 116334115 NC_000077.6:g.116334115A>T A T . . ANN=T|missense_variant|MODERATE|Foxj1|15223|transcript|ENSMUST00000036215.7|Coding|2/3|c.425T>A|p.(I142N)|776/4696|425/1266|142/422||;allele_of_genes="MGI:1347474";alleles="MGI:5297425";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.116334115A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Foxj1<sup>b2b774Clo</sup>";symbol_text="Foxj1<b2b774Clo>"
11 120470101 NC_000077.6:g.120470101A>G A G . . ANN=G|missense_variant|MODERATE|Hgs|15239|transcript|ENSMUST00000026900.13|Coding|4/22|c.265A>G|p.(M89V)|357/16350|265/2331|89/777||,G|missense_variant|MODERATE|Hgs|15239|transcript|ENSMUST00000106203.7|Coding|4/22|c.265A>G|p.(M89V)|357/16345|265/2304|89/768||,G|missense_variant|MODERATE|Hgs|15239|transcript|ENSMUST00000106205.7|Coding|4/22|c.265A>G|p.(M89V)|357/16345|265/2301|89/767||,G|missense_variant|MODERATE|Hgs|15239|transcript|ENSMUST00000140862.6|Coding|4/10|c.265A>G|p.(M89V)|357/9698|265/737|89/245||,G|non_coding_transcript_exon_variant|LOW|Hgs|15239|transcript|ENSMUST00000141826.1|Noncoding|4/8|n.357A>G||357/7685||||;allele_of_genes="MGI:104681";alleles="MGI:1857076";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000077.6:g.120470101A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159741";strain_name="C3H/HeJ";symbol="Hgs<sup>tn</sup>";symbol_text="Hgs<tn>"
12 21340750 NC_000078.6:g.21340750A>T A T . . ANN=T|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000064536.12|Coding|9/19|c.1027T>A|p.(F343I)|1227/50116|1027/2484|343/828||,T|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000101551.9|Coding|10/20|c.1084T>A|p.(F362I)|1245/50085|1084/2541|362/847||,T|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000145118.7|Coding|9/19|c.1027T>A|p.(F343I)|1188/50077|1027/1968|343/656||,T|coding_transcript_intron_variant|LOW|Adam17|11491|transcript|ENSMUST00000232107.1|Coding|3/3|c.324+13170T>A|p.(%3D)|432/49729|325/372|109/124||,T|3_prime_UTR_exon_variant|LOW|Adam17|11491|transcript|ENSMUST00000127974.7|Coding|9/19|c.*377T>A|p.(%3D)|1207/50077|670/669|224/223||,T|3_prime_UTR_exon_variant|LOW|Adam17|11491|transcript|ENSMUST00000232526.1|Coding|6/16|c.*553T>A|p.(%3D)|761/48570|118/117|40/39||,T|non_coding_transcript_exon_variant|LOW|Adam17|11491|transcript|ENSMUST00000155115.1|Noncoding|2/9|n.1436T>A||1436/16250||||;allele_of_genes="MGI:1096335";alleles="MGI:4835996";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.21340750A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adam17<sup>m1Btlr</sup>";symbol_text="Adam17<m1Btlr>"
12 21345670 NC_000078.6:g.21345670G>A G A . . ANN=A|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000064536.12|Coding|7/19|c.794C>T|p.(T265M)|994/50116|794/2484|265/828||,A|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000101551.9|Coding|8/20|c.851C>T|p.(T284M)|1012/50085|851/2541|284/847||,A|missense_variant|MODERATE|Adam17|11491|transcript|ENSMUST00000145118.7|Coding|7/19|c.794C>T|p.(T265M)|955/50077|794/1968|265/656||,A|coding_transcript_intron_variant|LOW|Adam17|11491|transcript|ENSMUST00000232107.1|Coding|3/3|c.324+8250C>T|p.(%3D)|432/49729|325/372|109/124||,A|3_prime_UTR_exon_variant|LOW|Adam17|11491|transcript|ENSMUST00000127974.7|Coding|7/19|c.*144C>T|p.(%3D)|974/50077|670/669|224/223||,A|3_prime_UTR_intron_variant|LOW|Adam17|11491|transcript|ENSMUST00000232526.1|Coding|4/15|c.*370-2693C>T|p.(%3D)|578/48570|118/117|40/39||;allele_of_genes="MGI:1096335";alleles="MGI:3625359";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.21345670G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Adam17<sup>woe</sup>";symbol_text="Adam17<woe>"
12 24578026 NC_000078.6:g.24578026A>T A T . . ANN=T|stop_gained|HIGH|Grhl1|195733|transcript|ENSMUST00000085553.12|Coding|3/16|c.214A>T|p.(R72*)|370/45106|214/1857|72/619||,T|non_coding_transcript_exon_variant|LOW|Grhl1|195733|transcript|ENSMUST00000221426.1|Noncoding|3/9|n.366A>T||366/24611||||;allele_of_genes="MGI:2182540";alleles="MGI:4437209";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.24578026A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Grhl1<sup>m1Btlr</sup>";symbol_text="Grhl1<m1Btlr>"
12 31525568 NC_000078.6:g.31525568A>T A T . . ANN=T|stop_gained|HIGH|Slc26a4|23985|transcript|ENSMUST00000001253.7|Coding|19/21|c.2118T>A|p.(C706*)|2333/40143|2118/2343|706/781||;allele_of_genes="MGI:1346029";alleles="MGI:5806435";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.31525568A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc26a4<sup>m2Btlr</sup>";symbol_text="Slc26a4<m2Btlr>"
12 31540533 NC_000078.6:g.31540533T>A T A . . ANN=A|stop_gained|HIGH|Slc26a4|23985|transcript|ENSMUST00000001253.7|Coding|9/21|c.1120A>T|p.(K374*)|1335/40143|1120/2343|374/781||;allele_of_genes="MGI:1346029";alleles="MGI:5789595";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.31540533T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc26a4<sup>m1Btlr</sup>";symbol_text="Slc26a4<m1Btlr>"
12 35500691 NC_000078.6:g.35500691A>G A G . . ANN=G|stop_lost|HIGH|Ahr|11622|transcript|ENSMUST00000116436.8|Coding|11/11|c.2416T>C|p.(*806Rext*43)|2831/37065|2416/2418|806/806||;allele_of_genes="MGI:105043";alleles="MGI:2667355";geneLevelConsequence="stop_lost";hgvs_nomenclature="NC_000078.6:g.35500691A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159790";strain_name="BALB/cBy";symbol="Ahr<sup>b-2</sup>";symbol_text="Ahr<b-2>"
12 35526814 NC_000078.6:g.35526814_35526822delinsGGATCCTGC TCTGTGTCG GGATCCTGC . . ANN=GGATCCTGC|mnv|HIGH|Ahr|11622|transcript|ENSMUST00000110811.2|Coding|2/9|c.109_117delCGACACAGAinsGCAGGATCC|p.(R37_R39delinsAGS)|109/29764|109/345|37/115||,GGATCCTGC|mnv|HIGH|Ahr|11622|transcript|ENSMUST00000116436.8|Coding|2/11|c.109_117delCGACACAGAinsGCAGGATCC|p.(R37_R39delinsAGS)|524/37065|109/2418|37/806||;allele_of_genes="MGI:105043";alleles="MGI:2663776";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.35526814_35526822delinsGGATCCTGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Ahr<sup>tm2Bra</sup>";symbol_text="Ahr<tm2Bra>"
12 41110847 NC_000078.6:g.41110847T>A T A . . ANN=A|stop_gained|HIGH|Immp2l|93757|transcript|ENSMUST00000080160.3|Coding|2/2|c.143T>A|p.(L48*)|143/42632|143/239|48/79||,A|stop_gained|HIGH|Immp2l|93757|transcript|ENSMUST00000132121.7|Coding|4/7|c.143T>A|p.(L48*)|274/931499|143/528|48/176||,A|stop_gained|HIGH|Immp2l|93757|transcript|ENSMUST00000134965.7|Coding|3/6|c.143T>A|p.(L48*)|450/930914|143/528|48/176||,A|non_coding_transcript_exon_variant|LOW|Immp2l|93757|transcript|ENSMUST00000140790.1|Noncoding|4/4|n.237T>A||237/86831||||;allele_of_genes="MGI:2135611";alleles="MGI:5806308";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.41110847T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Immp2l<sup>m1Btlr</sup>";symbol_text="Immp2l<m1Btlr>"
12 44576744 NC_000078.6:g.44576744C>T C T . . ANN=T|stop_gained|HIGH|Nrcam|319504|transcript|ENSMUST00000020939.15|Coding|26/31|c.3097C>T|p.(Q1033*)|3541/269859|3097/3771|1033/1257||,T|stop_gained|HIGH|Nrcam|319504|transcript|ENSMUST00000110748.3|Coding|25/28|c.3067C>T|p.(Q1023*)|3608/271875|3067/3561|1023/1187||,T|stop_gained|HIGH|Nrcam|319504|transcript|ENSMUST00000220123.1|Coding|25/31|c.3115C>T|p.(Q1039*)|3254/143022|3115/3405|1039/1135||,T|synonymous_variant|LOW|Nrcam|319504|transcript|ENSMUST00000220082.1|Coding|1/5|c.141C>T|p.(%3D)|141/22238|141/662|47/220||,T|non_coding_transcript_exon_variant|LOW|Nrcam|319504|transcript|ENSMUST00000220130.1|Noncoding|25/25|n.3521C>T||3521/248466||||;allele_of_genes="MGI:104750";alleles="MGI:4361555";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.44576744C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nrcam<sup>20884</sup>";symbol_text="Nrcam<20884>"
12 51774141 NC_000078.6:g.51774141A>T A T . . ANN=T|stop_gained|HIGH|Hectd1|207304|transcript|ENSMUST00000042052.8|Coding|22/43|c.3264T>A|p.(Y1088*)|3620/85815|3264/7833|1088/2611||,T|stop_gained|HIGH|Hectd1|207304|transcript|ENSMUST00000179265.7|Coding|22/43|c.3279T>A|p.(Y1093*)|3635/85815|3279/7857|1093/2619||;allele_of_genes="MGI:2384768";alleles="MGI:5313700";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.51774141A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hectd1<sup>b2b327Clo</sup>";symbol_text="Hectd1<b2b327Clo>"
12 73046053 NC_000078.6:g.73046053T>C T C . . ANN=C|missense_variant|MODERATE|Six1|20471|transcript|ENSMUST00000050029.7|Coding|1/2|c.374A>G|p.(E125G)|1127/5353|374/855|125/285||,C|non_coding_transcript_intron_variant|LOW|Six1|20471|transcript|ENSMUST00000176091.1|Noncoding|1/1|n.230-2224A>G||230/10357||||;allele_of_genes="MGI:102780";alleles="MGI:3849082";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.73046053T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Six1<sup>Cwe</sup>";symbol_text="Six1<Cwe>"
12 79268758 NC_000078.6:g.79268758G>A G A . . ANN=A|stop_gained|HIGH|Zfyve26|211978|transcript|ENSMUST00000021547.7|Coding|21/42|c.3943C>T|p.(R1315*)|4124/63959|3943/7590|1315/2530||,A|coding_transcript_intron_variant|LOW|Zfyve26|211978|transcript|ENSMUST00000218377.1|Coding|10/10|c.1609+14044C>T|p.(%3D)|1769/63935|1610/1704|537/568||;allele_of_genes="MGI:1924767";alleles="MGI:5792091";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.79268758G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zfyve26<sup>mpc264H</sup>";symbol_text="Zfyve26<mpc264H>"
12 84382295 NC_000078.6:g.84382295G>A G A . . ANN=A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000021662.11|Coding|12/15|c.961C>T|p.(R321*)|1171/31620|961/1284|321/428||,A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000072061.11|Coding|11/14|c.1036C>T|p.(R346*)|1098/31620|1036/1359|346/453||,A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000110272.8|Coding|13/16|c.961C>T|p.(R321*)|1230/35155|961/1284|321/428||,A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000117286.1|Coding|11/14|c.961C>T|p.(R321*)|1083/23877|961/1284|321/428||,A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000120942.7|Coding|12/15|c.961C>T|p.(R321*)|1142/35137|961/1284|321/428||,A|stop_gained|HIGH|Entpd5|12499|transcript|ENSMUST00000122194.7|Coding|12/15|c.961C>T|p.(R321*)|1205/24258|961/1284|321/428||,A|non_coding_transcript_exon_variant|LOW|Entpd5|12499|transcript|ENSMUST00000135061.1|Noncoding|3/4|n.443C>T||443/5053||||;allele_of_genes="MGI:1321385";alleles="MGI:5806325";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.84382295G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Entpd5<sup>m1Btlr</sup>";symbol_text="Entpd5<m1Btlr>"
12 98242714 NC_000078.6:g.98242714T>G T G . . ANN=G|missense_variant|MODERATE|Galc|14420|transcript|ENSMUST00000021390.8|Coding|7/17|c.680A>C|p.(D227A)|810/57166|680/2055|227/685||,G|synonymous_variant|LOW|Galc|14420|transcript|ENSMUST00000221063.1|Coding|2/12|c.99A>C|p.(%3D)|99/39670|99/1474|33/491||,G|non_coding_transcript_exon_variant|LOW|Galc|14420|transcript|ENSMUST00000220501.1|Noncoding|7/7|n.1295A>C||1295/19214||||,G|non_coding_transcript_exon_variant|LOW|Galc|14420|transcript|ENSMUST00000222042.1|Noncoding|7/12|n.649A>C||649/39297||||;allele_of_genes="MGI:95636";alleles="MGI:6304952";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.98242714T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Galc<sup>m3Btlr</sup>";symbol_text="Galc<m3Btlr>"
12 108686474 NC_000078.6:g.108686474A>G A G . . ANN=G|missense_variant|MODERATE|Evl|14026|transcript|ENSMUST00000223109.1|Coding|13/13|c.1177A>G|p.(T393A)|1386/50866|1177/1278|393/426||,G|coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000021689.13|Coding|13/13|c.1207+9A>G|p.(%3D)|1693/133793|1208/1245|403/415||,G|coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000077735.12|Coding|12/12|c.1144+9A>G|p.(%3D)|1634/133797|1145/1182|382/394||,G|coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000109854.8|Coding|12/12|c.1162+9A>G|p.(%3D)|1386/82748|1163/1200|388/400||,G|coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000172409.1|Coding|14/14|c.1168+9A>G|p.(%3D)|1471/52761|1169/1206|390/402||,G|coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000223548.1|Coding|2/2|c.81+9A>G|p.(%3D)|82/2420|82/119|28/39||,G|coding_transcript_intron_variant|LOW|Degs2|70059|transcript|ENSMUST00000222255.1|Coding|1/1|c.290+5420T>C|p.(%3D)|291/13473|291/296|97/98||,G|non_coding_transcript_intron_variant|LOW|Evl|14026|transcript|ENSMUST00000222048.1|Noncoding|6/6|n.587+9A>G||588/12104||||;allele_of_genes="MGI:1194884,MGI:1194884";alleles="MGI:5560907,MGI:5560907";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000078.6:g.108686474A>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Evl<sup>b2b2600Clo</sup>";symbol_text="Evl<b2b2600Clo>"
12 110617903 NC_000078.6:g.110617903T>A T A . . ANN=A|missense_variant|MODERATE|Dync1h1|13424|transcript|ENSMUST00000018851.13|Coding|8/77|c.1739T>A|p.(F580Y)|1892/65494|1739/13935|580/4645||;allele_of_genes="MGI:103147";alleles="MGI:2447991";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.110617903T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Dync1h1<sup>Loa</sup>";symbol_text="Dync1h1<Loa>"
12 110624616 NC_000078.6:g.110624617_110624626del GGGCATAGTGA G . . ANN=G|frameshift_truncation|HIGH|Dync1h1|13424|transcript|ENSMUST00000018851.13|Coding|12/77|c.3118_3127del|p.(G1040Lfs*28)|3271/65494|3118/13935|1040/4645||;allele_of_genes="MGI:103147";alleles="MGI:1861136";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000078.6:g.110624617_110624626del";impact="HIGH";soTerm="deletion";strain_id="MGI:5652363";strain_name="(C3H/HeH_x_101/H)F1";symbol="Dync1h1<sup>Swl</sup>";symbol_text="Dync1h1<Swl>"
12 110625440 NC_000078.6:g.110625440A>G A G . . ANN=G|missense_variant|MODERATE|Dync1h1|13424|transcript|ENSMUST00000018851.13|Coding|13/77|c.3164A>G|p.(Y1055C)|3317/65494|3164/13935|1055/4645||;allele_of_genes="MGI:103147";alleles="MGI:2661085";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.110625440A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Dync1h1<sup>Cra1</sup>";symbol_text="Dync1h1<Cra1>"
12 111261576 NC_000078.6:g.111261576T>A T A . . ANN=A|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000021706.10|Coding|12/12|c.1220T>A|p.(V407D)|1488/100686|1220/1704|407/568||,A|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000060274.6|Coding|11/11|c.1145T>A|p.(V382D)|1328/100597|1145/1629|382/543||,A|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000117269.7|Coding|10/10|c.1145T>A|p.(V382D)|1395/100784|1145/1629|382/543||,A|non_coding_transcript_exon_variant|LOW|Traf3|22031|transcript|ENSMUST00000143395.1|Noncoding|6/6|n.736T>A||736/14078||||;allele_of_genes="MGI:108041";alleles="MGI:5578024";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.111261576T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Traf3<sup>m1Btlr</sup>";symbol_text="Traf3<m1Btlr>"
12 111262036 NC_000078.6:g.111262036T>G T G . . ANN=G|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000021706.10|Coding|12/12|c.1680T>G|p.(D560E)|1948/100686|1680/1704|560/568||,G|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000060274.6|Coding|11/11|c.1605T>G|p.(D535E)|1788/100597|1605/1629|535/543||,G|missense_variant|MODERATE|Traf3|22031|transcript|ENSMUST00000117269.7|Coding|10/10|c.1605T>G|p.(D535E)|1855/100784|1605/1629|535/543||,G|non_coding_transcript_exon_variant|LOW|Traf3|22031|transcript|ENSMUST00000143395.1|Noncoding|6/6|n.1196T>G||1196/14078||||;allele_of_genes="MGI:108041";alleles="MGI:5615721";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.111262036T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Traf3<sup>m2Btlr</sup>";symbol_text="Traf3<m2Btlr>"
12 111276122 NC_000078.6:g.111276122A>G A G . . ANN=G|missense_variant|MODERATE|Amn|93835|transcript|ENSMUST00000021707.7|Coding|12/12|c.1370A>G|p.(E457G)|1397/5332|1370/1377|457/459||,G|non_coding_transcript_exon_variant|LOW|Amn|93835|transcript|ENSMUST00000220551.1|Noncoding|7/7|n.894A>G||894/1579||||;allele_of_genes="MGI:1934943";alleles="MGI:5614775";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.111276122A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Amn<sup>b2b2259Clo</sup>";symbol_text="Amn<b2b2259Clo>"
12 111795603 NC_000078.6:g.111795603T>C T C . . ANN=C|missense_variant|MODERATE|Klc1|16593|transcript|ENSMUST00000084941.11|Coding|14/16|c.1706T>C|p.(I569T)|1901/47927|1706/1851|569/617||,C|missense_variant|MODERATE|Klc1|16593|transcript|ENSMUST00000122300.7|Coding|14/16|c.1682T>C|p.(I561T)|1713/47715|1682/1827|561/609||,C|coding_transcript_intron_variant|LOW|Klc1|16593|transcript|ENSMUST00000134578.1|Coding|5/6|c.459+6144T>C|p.(%3D)|460/25898|460/519|154/173||,C|non_coding_transcript_exon_variant|LOW|Klc1|16593|transcript|ENSMUST00000141435.1|Noncoding|1/3|n.252T>C||252/11375||||;allele_of_genes="MGI:107978";alleles="MGI:6113672";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.111795603T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Klc1<sup>m1Btlr</sup>";symbol_text="Klc1<m1Btlr>"
12 112764457 NC_000078.6:g.112764457C>T C T . . ANN=T|missense_variant|MODERATE|Pld4|104759|transcript|ENSMUST00000063888.4|Coding|5/11|c.472C>T|p.(L158F)|574/8336|472/1512|158/504||,T|non_coding_transcript_exon_variant|LOW|Pld4|104759|transcript|ENSMUST00000221115.1|Noncoding|5/11|n.807C>T||807/7282||||;allele_of_genes="MGI:2144765";alleles="MGI:5791986";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.112764457C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pld4<sup>mpc96H</sup>";symbol_text="Pld4<mpc96H>"
12 117954826 NC_000078.6:g.117954826T>A T A . . ANN=A|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|64/82|c.10369A>T|p.(I3457F)|10580/321062|10369/13467|3457/4489||,A|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000176756.8|Coding|32/52|c.4658A>T|p.(H1553L)|4658/182322|4658/5065|1553/1688||;allele_of_genes="MGI:1100864";alleles="MGI:5311393";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.117954826T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1279Clo</sup>";symbol_text="Dnah11<b2b1279Clo>"
12 117960990 NC_000078.6:g.117960990G>A G A . . ANN=A|stop_gained|HIGH|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|63/82|c.10243C>T|p.(Q3415*)|10454/321062|10243/13467|3415/4489||,A|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000176756.8|Coding|31/52|c.4532C>T|p.(A1511V)|4532/182322|4532/5065|1511/1688||;allele_of_genes="MGI:1100864";alleles="MGI:5311388";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.117960990G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1203Clo</sup>";symbol_text="Dnah11<b2b1203Clo>"
12 118038773 NC_000078.6:g.118038773A>C A C . . ANN=C|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|41/82|c.6641T>G|p.(L2214R)|6852/321062|6641/13467|2214/4489||,C|synonymous_variant|LOW|Dnah11|13411|transcript|ENSMUST00000176756.8|Coding|9/52|c.930T>G|p.(%3D)|930/182322|930/5065|310/1688||;allele_of_genes="MGI:1100864";alleles="MGI:5491272";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.118038773A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b2349Clo</sup>";symbol_text="Dnah11<b2b2349Clo>"
12 118043751 NC_000078.6:g.118043751A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|39/81|c.6489+2T>C|p.?|6701/321062|6490/13467|2164/4489||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah11|13411|transcript|ENSMUST00000176756.8|Coding|7/51|c.778+2T>C|p.?|779/182322|779/5065|260/1688||;allele_of_genes="MGI:1100864";alleles="MGI:5446158";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000078.6:g.118043751A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1775Clo</sup>";symbol_text="Dnah11<b2b1775Clo>"
12 118057111 NC_000078.6:g.118057111T>C T C . . ANN=C|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|35/82|c.5966A>G|p.(N1989S)|6177/321062|5966/13467|1989/4489||,C|synonymous_variant|LOW|Dnah11|13411|transcript|ENSMUST00000176756.8|Coding|3/52|c.255A>G|p.(%3D)|255/182322|255/5065|85/1688||;allele_of_genes="MGI:1100864";alleles="MGI:5696351";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.118057111T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1468.2Clo</sup>";symbol_text="Dnah11<b2b1468.2Clo>"
12 118060383 NC_000078.6:g.118060383T>C T C . . ANN=C|missense_variant|MODERATE|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|33/82|c.5632A>G|p.(T1878A)|5843/321062|5632/13467|1878/4489||;allele_of_genes="MGI:1100864";alleles="MGI:5437083";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000078.6:g.118060383T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1289Clo</sup>";symbol_text="Dnah11<b2b1289Clo>"
12 118127024 NC_000078.6:g.118127024G>A G A . . ANN=A|stop_gained|HIGH|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|16/82|c.3184C>T|p.(Q1062*)|3395/321062|3184/13467|1062/4489||;allele_of_genes="MGI:1100864";alleles="MGI:5311372";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000078.6:g.118127024G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b598Clo</sup>";symbol_text="Dnah11<b2b598Clo>"
12 118186883 NC_000078.6:g.118186883A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah11|13411|transcript|ENSMUST00000084806.6|Coding|6/81|c.1137+2T>C|p.?|1349/321062|1138/13467|380/4489||;allele_of_genes="MGI:1100864";alleles="MGI:5437727";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000078.6:g.118186883A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah11<sup>b2b1727Clo</sup>";symbol_text="Dnah11<b2b1727Clo>"
13 9878964 NC_000079.6:g.9878964A>T A T . . ANN=T|stop_gained|HIGH|Chrm3|.|transcript|ENSMUST00000063093.9|Coding|1/1|c.35T>A|p.(L12*)|35/1770|35/1770|12/590||,T|stop_gained|HIGH|Chrm3|12671|transcript|ENSMUST00000187510.6|Coding|5/5|c.35T>A|p.(L12*)|858/485359|35/1770|12/590||;allele_of_genes="MGI:88398";alleles="MGI:5792039";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.9878964A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Chrm3<sup>mpc214H</sup>";symbol_text="Chrm3<mpc214H>"
13 12478497 NC_000079.6:g.12478497T>A T A . . ANN=A|missense_variant|MODERATE|Edaradd|171211|transcript|ENSMUST00000179308.2|Coding|6/6|c.313A>T|p.(I105F)|803/47807|313/627|105/209||;allele_of_genes="MGI:1931001";alleles="MGI:3778290";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.12478497T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Edaradd<sup>cr-Btlr</sup>";symbol_text="Edaradd<cr-Btlr>"
13 13647083 NC_000079.6:g.13647083T>C T C . . ANN=C|synonymous_variant|LOW|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|11/53|c.4041T>C|p.(%3D)|4234/188407|4041/11364|1347/3788||,C|non_coding_transcript_exon_variant|LOW|Lyst|17101|transcript|ENSMUST00000220937.1|Noncoding|11/12|n.4222T>C||4222/59709||||;allele_of_genes="MGI:107448";alleles="MGI:5789566";geneLevelConsequence="synonymous_variant";hgvs_nomenclature="NC_000079.6:g.13647083T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-9Btlr</sup>";symbol_text="Lyst<bg-9Btlr>"
13 13648802 NC_000079.6:g.13648802T>A T A . . ANN=A|stop_gained|HIGH|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|12/53|c.4358T>A|p.(L1453*)|4551/188407|4358/11364|1453/3788||,A|non_coding_transcript_exon_variant|LOW|Lyst|17101|transcript|ENSMUST00000220937.1|Noncoding|12/12|n.4539T>A||4539/59709||||;allele_of_genes="MGI:107448";alleles="MGI:6114069";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.13648802T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-10Btlr</sup>";symbol_text="Lyst<bg-10Btlr>"
13 13681524 NC_000079.6:g.13681524T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|26/52|c.7427+2T>C|p.?|7621/188407|7428/11364|2476/3788||;allele_of_genes="MGI:107448";alleles="MGI:3620573";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000079.6:g.13681524T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Lyst<sup>bg-grey</sup>";symbol_text="Lyst<bg-grey>"
13 13696794 NC_000079.6:g.13696794T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|30/52|c.8109+6T>C|p.?|8303/188407|8110/11364|2704/3788||;allele_of_genes="MGI:107448";alleles="MGI:5789550";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000079.6:g.13696794T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-8Btlr</sup>";symbol_text="Lyst<bg-8Btlr>"
13 13708212 NC_000079.6:g.13708212T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|34/52|c.8759+2T>A|p.?|8953/188407|8760/11364|2920/3788||;allele_of_genes="MGI:107448";alleles="MGI:5607168";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000079.6:g.13708212T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-4Btlr</sup>";symbol_text="Lyst<bg-4Btlr>"
13 13740513 NC_000079.6:g.13740513C>A C A . . ANN=A|missense_variant|MODERATE|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|43/53|c.9791C>A|p.(T3264N)|9984/188407|9791/11364|3264/3788||,A|non_coding_transcript_exon_variant|LOW|Lyst|17101|transcript|ENSMUST00000221717.1|Noncoding|9/11|n.969C>A||969/38179||||;allele_of_genes="MGI:107448";alleles="MGI:5775024";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.13740513C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-7Btlr</sup>";symbol_text="Lyst<bg-7Btlr>"
13 13740536 NC_000079.6:g.13740536T>C T C . . ANN=C|missense_variant|MODERATE|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|43/53|c.9814T>C|p.(S3272P)|10007/188407|9814/11364|3272/3788||,C|non_coding_transcript_exon_variant|LOW|Lyst|17101|transcript|ENSMUST00000221717.1|Noncoding|9/11|n.992T>C||992/38179||||;allele_of_genes="MGI:107448";alleles="MGI:5632154";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.13740536T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-6Btlr</sup>";symbol_text="Lyst<bg-6Btlr>"
13 13757422 NC_000079.6:g.13757422T>C T C . . ANN=C|missense_variant|MODERATE|Lyst|17101|transcript|ENSMUST00000110559.2|Coding|47/53|c.10634T>C|p.(F3545S)|10827/188407|10634/11364|3545/3788||;allele_of_genes="MGI:107448";alleles="MGI:5615966";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.13757422T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lyst<sup>bg-5Btlr</sup>";symbol_text="Lyst<bg-5Btlr>"
13 23705908 NC_000079.6:g.23705908C>T C T . . ANN=T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000006787.7|Coding|2/4|c.317G>A|p.(C106Y)|317/6329|317/516|106/172||,T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091706.13|Coding|4/6|c.881G>A|p.(C294Y)|1021/8821|881/1080|294/360||,T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091707.12|Coding|3/5|c.617G>A|p.(C206Y)|617/6329|617/816|206/272||;allele_of_genes="MGI:109191,MGI:109191,MGI:109191,MGI:109191";alleles="MGI:2385350,MGI:2385350,MGI:2385350,MGI:2385350";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.23705908C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Hfe<sup>tm1.1Nca</sup>";symbol_text="Hfe<tm1.1Nca>"
13 23705908 NC_000079.6:g.23705908C>T C T . . ANN=T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000006787.7|Coding|2/4|c.317G>A|p.(C106Y)|317/6329|317/516|106/172||,T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091706.13|Coding|4/6|c.881G>A|p.(C294Y)|1021/8821|881/1080|294/360||,T|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091707.12|Coding|3/5|c.617G>A|p.(C206Y)|617/6329|617/816|206/272||;allele_of_genes="MGI:109191,MGI:109191,MGI:109191,MGI:109191";alleles="MGI:3033462,MGI:3033462,MGI:3033462,MGI:3033462";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.23705908C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Hfe<sup>tm3Sly</sup>";symbol_text="Hfe<tm3Sly>"
13 23708181 NC_000079.6:g.23708181G>C G C . . ANN=C|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091706.13|Coding|2/6|c.199C>G|p.(H67D)|339/8821|199/1080|67/360||,C|coding_transcript_intron_variant|LOW|Hfe|15216|transcript|ENSMUST00000006787.7|Coding|1/3|c.89-2045C>G|p.(%3D)|89/6329|89/516|30/172||,C|coding_transcript_intron_variant|LOW|Hfe|15216|transcript|ENSMUST00000091707.12|Coding|1/4|c.89-1115C>G|p.(%3D)|89/6329|89/816|30/272||;allele_of_genes="MGI:109191,MGI:109191,MGI:109191,MGI:109191,MGI:109191,MGI:109191";alleles="MGI:5516426,MGI:5516426,MGI:5516426,MGI:5516426,MGI:5516426,MGI:5516426";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.23708181G>C";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Hfe<sup>tm1.1Jrco</sup>";symbol_text="Hfe<tm1.1Jrco>"
13 23708181 NC_000079.6:g.23708181G>C G C . . ANN=C|missense_variant|MODERATE|Hfe|15216|transcript|ENSMUST00000091706.13|Coding|2/6|c.199C>G|p.(H67D)|339/8821|199/1080|67/360||,C|coding_transcript_intron_variant|LOW|Hfe|15216|transcript|ENSMUST00000006787.7|Coding|1/3|c.89-2045C>G|p.(%3D)|89/6329|89/516|30/172||,C|coding_transcript_intron_variant|LOW|Hfe|15216|transcript|ENSMUST00000091707.12|Coding|1/4|c.89-1115C>G|p.(%3D)|89/6329|89/816|30/272||;allele_of_genes="MGI:109191,MGI:109191,MGI:109191,MGI:109191,MGI:109191,MGI:109191";alleles="MGI:3033459,MGI:3033459,MGI:3033459,MGI:3033459,MGI:3033459,MGI:3033459";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.23708181G>C";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Hfe<sup>tm2Sly</sup>";symbol_text="Hfe<tm2Sly>"
13 30751751 NC_000079.6:g.30751751A>T A T . . ANN=T|missense_variant|MODERATE|Irf4|16364|transcript|ENSMUST00000021784.9|Coding|3/9|c.288A>T|p.(R96S)|390/17751|288/1353|96/451||,T|missense_variant|MODERATE|Irf4|16364|transcript|ENSMUST00000110307.2|Coding|3/9|c.288A>T|p.(R96S)|390/17751|288/1350|96/450||;allele_of_genes="MGI:1096873";alleles="MGI:4456226";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.30751751A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf4<sup>m1Btlr</sup>";symbol_text="Irf4<m1Btlr>"
13 30761490 NC_000079.6:g.30761490T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Irf4|16364|transcript|ENSMUST00000021784.9|Coding|8/8|c.1212+6T>C|p.?|1315/17751|1213/1353|405/451||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Irf4|16364|transcript|ENSMUST00000110307.2|Coding|8/8|c.1209+6T>C|p.?|1312/17751|1210/1350|404/450||;allele_of_genes="MGI:1096873";alleles="MGI:5789556";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000079.6:g.30761490T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf4<sup>M2Btlr</sup>";symbol_text="Irf4<M2Btlr>"
13 34013340 NC_000079.6:g.34013340_34013342delinsAAC G A . . ANN=A|missense_variant|MODERATE|Ripk1|19766|transcript|ENSMUST00000021844.14|Coding|4/11|c.412G>A|p.(D138N)|812/31315|412/1971|138/657||,A|missense_variant|MODERATE|Ripk1|19766|transcript|ENSMUST00000167374.8|Coding|4/11|c.412G>A|p.(D138N)|548/34274|412/1971|138/657||,A|coding_transcript_intron_variant|LOW|Ripk1|19766|transcript|ENSMUST00000171137.1|Coding|2/8|c.281-1786G>A|p.(%3D)|281/23085|281/1792|94/597||,A|non_coding_transcript_exon_variant|LOW|Ripk1|19766|transcript|ENSMUST00000163418.1|Noncoding|4/4|n.775G>A||775/12287||||;allele_of_genes="MGI:108212";alleles="MGI:5614572";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.34013340_34013342delinsAAC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Ripk1<sup>tm1Geno</sup>";symbol_text="Ripk1<tm1Geno>"
13 34128069 NC_000079.6:g.34128069T>C T C . . ANN=C|missense_variant|MODERATE|Tubb2b|73710|transcript|ENSMUST00000075774.4|Coding|4/4|c.740A>G|p.(N247S)|861/3607|740/1338|247/446||;allele_of_genes="MGI:1920960";alleles="MGI:5056364";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.34128069T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159747";strain_name="A/J";symbol="Tubb2b<sup>brdp</sup>";symbol_text="Tubb2b<brdp>"
13 38631082 NC_000079.6:g.38631082A>T A T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Bloc1s5|17828|transcript|ENSMUST00000035899.7|Coding|1/4|c.107-7T>A|p.?|175/36269|107/558|36/186||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Bloc1s5|17828|transcript|ENSMUST00000224115.1|Coding|1/4|c.107-7T>A|p.?|158/42251|107/450|36/150||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Bloc1s5|17828|transcript|ENSMUST00000224902.1|Coding|1/4|c.107-7T>A|p.?|127/23228|107/510|36/170||;allele_of_genes="MGI:2178598";alleles="MGI:3799687";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000079.6:g.38631082A>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Bloc1s5<sup>mu-Btlr</sup>";symbol_text="Bloc1s5<mu-Btlr>"
13 40728646 NC_000079.6:g.40728646G>A G A . . ANN=A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000021787.6|Coding|2/7|c.158C>T|p.(P53L)|536/15142|158/1296|53/432||,A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000110193.8|Coding|2/7|c.176C>T|p.(P59L)|285/18149|176/1314|59/438||,A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000223869.1|Coding|2/7|c.164C>T|p.(P55L)|389/21772|164/1302|55/434||,A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000224665.1|Coding|2/7|c.182C>T|p.(P61L)|437/17244|182/1320|61/440||,A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000224999.1|Coding|3/8|c.182C>T|p.(P61L)|529/18197|182/1320|61/440||,A|missense_variant|MODERATE|Tfap2a|21418|transcript|ENSMUST00000225180.1|Coding|1/6|c.263C>T|p.(P88L)|299/12221|263/1401|88/467||,A|non_coding_transcript_exon_variant|LOW|Tfap2a|21418|transcript|ENSMUST00000223908.1|Noncoding|2/5|n.240C>T||240/12675||||,A|non_coding_transcript_exon_variant|LOW|Tfap2a|21418|transcript|ENSMUST00000224319.1|Noncoding|2/7|n.294C>T||294/15586||||,A|non_coding_transcript_exon_variant|LOW|Tfap2a|21418|transcript|ENSMUST00000224700.1|Noncoding|2/3|n.218C>T||218/4274||||,A|non_coding_transcript_intron_variant|LOW|Gm26688|102633805|transcript|ENSMUST00000181176.2|Noncoding|1/2|n.57+782G>A||58/7355||||;allele_of_genes="MGI:104671,MGI:104671";alleles="MGI:3045427,MGI:3045427";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000079.6:g.40728646G>A";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Tfap2a<sup>Mhdador</sup>";symbol_text="Tfap2a<Mhdador>"
13 44982738 NC_000079.6:g.44982738T>A T A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000072329.14|Coding|5/9|c.355+3A>T|p.?|531/80069|356/1059|119/353||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000110128.4|Coding|5/9|c.355+3A>T|p.?|480/80012|356/1059|119/353||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000220555.1|Coding|5/9|c.325+3A>T|p.?|754/79760|326/1029|109/343||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000221393.1|Noncoding|1/5|n.257+3A>T||258/60912||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000221413.1|Coding|5/10|c.325+3A>T|p.?|781/79787|326/744|109/248||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000222583.1|Coding|6/10|c.112+3A>T|p.?|743/79573|113/816|38/272||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000222805.1|Coding|5/7|c.355+3A>T|p.?|475/50309|356/537|119/179||,A|coding_transcript_intron_variant|LOW|Dtnbp1|94245|transcript|ENSMUST00000222990.1|Coding|4/8|c.192+3297A>T|p.(%3D)|612/79751|193/201|65/67||;allele_of_genes="MGI:2137586";alleles="MGI:3774127";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000079.6:g.44982738T>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dtnbp1<sup>sdy-Btlr</sup>";symbol_text="Dtnbp1<sdy-Btlr>"
13 59512322 NC_000079.6:g.59512322A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000022040.13|Coding|11/25|c.1087+2T>A|p.?|1210/111570|1088/3657|363/1219||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000109830.8|Coding|11/17|c.1087+2T>A|p.?|1185/63887|1088/2370|363/790||,T|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000151827.2|Noncoding|2/2|n.246+2T>A||247/2797||||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000163149.8|Coding|7/13|c.749+2T>A|p.?|750/83196|750/2056|250/685||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000164215.7|Coding|10/24|c.1087+2T>A|p.?|1109/90590|1088/3525|363/1175||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165370.8|Coding|10/10|c.940+2T>A|p.?|1031/49279|941/996|314/332||,T|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165477.8|Coding|10/16|c.*308+2T>A|p.(%3D)|1156/78602|742/741|248/247||,T|splice_donor_variant&3_prime_UTR_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000169745.7|Coding|10/24|c.*308+2T>A|p.(%3D)|1317/107043|742/741|248/247||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000170555.7|Coding|11/22|c.1087+2T>A|p.?|1310/107407|1088/2388|363/796||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000171606.8|Coding|11/17|c.1087+2T>A|p.?|1343/63920|1088/2370|363/790||;allele_of_genes="MGI:2159437";alleles="MGI:3774134";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000079.6:g.59512322A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Agtpbp1<sup>pcd-Btlr</sup>";symbol_text="Agtpbp1<pcd-Btlr>"
13 59525241 NC_000079.6:g.59525241T>C T C . . ANN=C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000022040.13|Coding|7/25|c.569-2A>G|p.?|691/111570|569/3657|190/1219||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000109830.8|Coding|7/17|c.569-2A>G|p.?|666/63887|569/2370|190/790||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000163149.8|Coding|3/13|c.231-2A>G|p.?|231/83196|231/2056|77/685||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000164215.7|Coding|6/24|c.569-2A>G|p.?|590/90590|569/3525|190/1175||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165370.8|Coding|6/10|c.422-2A>G|p.?|512/49279|422/996|141/332||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165477.8|Coding|7/16|c.569-2A>G|p.?|675/78602|569/741|190/247||,C|splice_acceptor_variant&3_prime_UTR_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165598.7|Coding|8/9|c.*503-2A>G|p.(%3D)|819/39608|217/216|73/72||,C|splice_acceptor_variant&3_prime_UTR_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000165851.7|Coding|4/6|c.*291-2A>G|p.(%3D)|393/19907|103/102|35/34||,C|splice_acceptor_variant&3_prime_UTR_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000167593.7|Coding|6/9|c.*315-2A>G|p.(%3D)|566/44928|130/129|44/43||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000169745.7|Coding|7/24|c.569-2A>G|p.?|836/107043|569/741|190/247||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000170555.7|Coding|7/22|c.569-2A>G|p.?|791/107407|569/2388|190/796||,C|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Agtpbp1|67269|transcript|ENSMUST00000171606.8|Coding|7/17|c.569-2A>G|p.?|824/63920|569/2370|190/790||;allele_of_genes="MGI:2159437";alleles="MGI:4442903";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000079.6:g.59525241T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Agtpbp1<sup>m2Btlr</sup>";symbol_text="Agtpbp1<m2Btlr>"
13 63534290 NC_000079.6:g.63534290C>T C T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Ptch1|19206|transcript|ENSMUST00000021921.10|Coding|13/23|c.1805G>A|p.(S602N)|2020/57408|1805/4305|602/1435||,T|missense_variant&splice_region_variant|MODERATE|Ptch1|19206|transcript|ENSMUST00000192155.5|Coding|13/24|c.1394G>A|p.(S465N)|1724/56200|1394/3894|465/1298||,T|missense_variant&splice_region_variant|MODERATE|Ptch1|19206|transcript|ENSMUST00000194663.5|Coding|13/24|c.1649G>A|p.(S550N)|2015/65132|1649/1746|550/582||,T|splice_region_variant&3_prime_UTR_exon_variant|LOW|Ptch1|19206|transcript|ENSMUST00000195258.6|Coding|11/22|c.*240G>A|p.(%3D)|1611/55486|1372/1371|458/457||;allele_of_genes="MGI:105373";alleles="MGI:5544595";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000079.6:g.63534290C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ptch1<sup>dl</sup>";symbol_text="Ptch1<dl>"
13 73798989 NC_000079.6:g.73798989C>T C T . . ANN=T|stop_gained|HIGH|Slc12a7|20499|transcript|ENSMUST00000017900.8|Coding|14/24|c.1795C>T|p.(Q599*)|1865/53058|1795/3252|599/1084||,T|non_coding_transcript_exon_variant|LOW|Slc12a7|20499|transcript|ENSMUST00000220522.1|Noncoding|13/20|n.2525C>T||2525/53004||||,T|non_coding_transcript_exon_variant|LOW|Slc12a7|20499|transcript|ENSMUST00000222253.1|Noncoding|14/23|n.1855C>T||1855/48652||||,T|non_coding_transcript_exon_variant|LOW|Slc12a7|20499|transcript|ENSMUST00000223008.1|Noncoding|3/3|n.256C>T||256/1858||||;allele_of_genes="MGI:1342283";alleles="MGI:5792092";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.73798989C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc12a7<sup>mpc264H</sup>";symbol_text="Slc12a7<mpc264H>"
13 75096290 NC_000079.6:g.75096290G>T G T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Pcsk1|18548|transcript|ENSMUST00000022075.5|Coding|3/14|c.286G>T|p.(V96L)|522/45036|286/2262|96/754||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Pcsk1|18548|transcript|ENSMUST00000135349.1|Noncoding|3/6|n.432G>T||432/16688||||;allele_of_genes="MGI:97511";alleles="MGI:5792086";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000079.6:g.75096290G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcsk1<sup>mpc242H</sup>";symbol_text="Pcsk1<mpc242H>"
13 81509364 NC_000079.6:g.81509364A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Adgrv1|110789|transcript|ENSMUST00000095585.10|Coding|37/89|c.8554+2T>C|p.?|8681/538087|8555/18897|2852/6299||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Adgrv1|110789|transcript|ENSMUST00000109565.8|Coding|27/28|c.6394+2T>C|p.?|6470/64909|6395/6717|2132/2239||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Adgrv1|110789|transcript|ENSMUST00000129725.1|Noncoding|12/13|n.3413+2T>C||3414/27649||||,G|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Adgrv1|110789|transcript|ENSMUST00000156627.7|Noncoding|33/34|n.8815+2T>C||8816/79124||||;allele_of_genes="MGI:1274784";alleles="MGI:5792019";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000079.6:g.81509364A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adgrv1<sup>mpc188H</sup>";symbol_text="Adgrv1<mpc188H>"
13 97185601 NC_000079.6:g.97185601A>C A C . . ANN=C|stop_gained|HIGH|Hexb|15212|transcript|ENSMUST00000022169.9|Coding|6/14|c.675T>G|p.(Y225*)|771/22027|675/1611|225/537||,C|non_coding_transcript_exon_variant|LOW|Hexb|15212|transcript|ENSMUST00000222700.1|Noncoding|5/6|n.563T>G||563/14620||||;allele_of_genes="MGI:96074";alleles="MGI:5792023";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.97185601A>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hexb<sup>mpc191H</sup>";symbol_text="Hexb<mpc191H>"
13 99234188 NC_000079.6:g.99234188G>T G T . . ANN=T|missense_variant|MODERATE|Zfp366|238803|transcript|ENSMUST00000056558.9|Coding|3/5|c.1415G>T|p.(R472L)|1471/65834|1415/2241|472/747||;allele_of_genes="MGI:2178429";alleles="MGI:5645262";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.99234188G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zfp366<sup>b2b2834Clo</sup>";symbol_text="Zfp366<b2b2834Clo>"
13 100221903 NC_000079.6:g.100221903G>A G A . . ANN=A|stop_gained|HIGH|Naip5|17951|transcript|ENSMUST00000049789.2|Coding|9/14|c.2824C>T|p.(Q942*)|2948/34585|2824/4212|942/1404||;allele_of_genes="MGI:1298220";alleles="MGI:5789559";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.100221903G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Naip5<sup>m2Btlr</sup>";symbol_text="Naip5<m2Btlr>"
13 100223014 NC_000079.6:g.100223014G>T G T . . ANN=T|stop_gained|HIGH|Naip5|17951|transcript|ENSMUST00000049789.2|Coding|9/14|c.1713C>A|p.(Y571*)|1837/34585|1713/4212|571/1404||;allele_of_genes="MGI:1298220";alleles="MGI:5789561";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000079.6:g.100223014G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Naip5<sup>m1Btlr</sup>";symbol_text="Naip5<m1Btlr>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258,MGI:5491258";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2228Clo</sup>";symbol_text="Adamts6<b2b2228Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287,MGI:5487287";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2029Clo</sup>";symbol_text="Adamts6<b2b2029Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302,MGI:5646302";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2966.2Clo</sup>";symbol_text="Adamts6<b2b2966.2Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743,MGI:5547743";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2187.1Clo</sup>";symbol_text="Adamts6<b2b2187.1Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144,MGI:5560144";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2405Clo</sup>";symbol_text="Adamts6<b2b2405Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179,MGI:5476179";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b1879.1Clo</sup>";symbol_text="Adamts6<b2b1879.1Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500,MGI:5560500";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2744Clo</sup>";symbol_text="Adamts6<b2b2744Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254,MGI:5491254";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2182Clo</sup>";symbol_text="Adamts6<b2b2182Clo>"
13 104297511 NC_000079.6:g.104297511C>G C G . . ANN=G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000065766.6|Coding|3/25|c.447C>G|p.(S149R)|856/206891|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000223562.1|Coding|3/21|c.447C>G|p.(S149R)|858/174447|447/1407|149/469||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224208.1|Coding|2/24|c.447C>G|p.(S149R)|685/202103|447/3354|149/1118||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224303.1|Coding|2/24|c.447C>G|p.(S149R)|465/199539|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224742.1|Coding|3/27|c.447C>G|p.(S149R)|754/206774|447/879|149/293||,G|missense_variant|MODERATE|Adamts6|108154|transcript|ENSMUST00000224784.1|Coding|3/25|c.447C>G|p.(S149R)|1007/208861|447/1407|149/469||;allele_of_genes="MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348,MGI:1347348";alleles="MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143,MGI:5560143";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.104297511C>G";impact="MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts6<sup>b2b2407Clo</sup>";symbol_text="Adamts6<b2b2407Clo>"
13 104720435 NC_000079.6:g.104720436_104720444del CTCCACTTTT C . . ANN=C|disruptive_inframe_deletion|MODERATE|Cwc27|67285|transcript|ENSMUST00000022228.12|Coding|11/14|c.1011_1019del|p.(I337_E340delinsM)|1236/185814|1011/1410|337/470||;allele_of_genes="MGI:1914535";alleles="MGI:6342430";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000079.6:g.104720436_104720444del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cwc27<sup>em1Bay</sup>";symbol_text="Cwc27<em1Bay>"
13 116308280 NC_000079.6:g.116308280T>C T C . . ANN=C|missense_variant|MODERATE|Isl1|16392|transcript|ENSMUST00000036060.12|Coding|2/6|c.212A>G|p.(Y71C)|479/11409|212/1050|71/350||,C|missense_variant|MODERATE|Isl1|16392|transcript|ENSMUST00000176044.2|Coding|2/6|c.212A>G|p.(Y71C)|212/10160|212/981|71/327||,C|non_coding_transcript_exon_variant|LOW|Isl1|16392|transcript|ENSMUST00000177469.2|Noncoding|2/2|n.475A>G||475/2795||||;allele_of_genes="MGI:101791";alleles="MGI:5523699";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.116308280T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Isl1<sup>Drsh</sup>";symbol_text="Isl1<Drsh>"
13 118715655 NC_000079.6:g.118715655T>C T C . . ANN=C|missense_variant|MODERATE|Fgf10|14165|transcript|ENSMUST00000022246.8|Coding|1/3|c.272T>C|p.(L91P)|957/77417|272/630|91/210||,C|non_coding_transcript_intron_variant|LOW|Fgf10|14165|transcript|ENSMUST00000128103.8|Noncoding|3/4|n.365+12396T>C||366/119544||||,C|non_coding_transcript_intron_variant|LOW|Fgf10|14165|transcript|ENSMUST00000146674.1|Noncoding|2/3|n.197+12396T>C||198/111754||||;allele_of_genes="MGI:1099809,MGI:1099809";alleles="MGI:4849925,MGI:4849925";geneLevelConsequence="intron_variant,non_coding_transcript_variant,missense_variant";hgvs_nomenclature="NC_000079.6:g.118715655T>C";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Fgf10<sup>ptls</sup>";symbol_text="Fgf10<ptls>"
13 119369971 NC_000079.6:g.119369971C>T C T . . ANN=T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000069902.12|Coding|8/15|c.1139G>A|p.(G380D)|1286/73550|1139/2166|380/722||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000099149.9|Coding|10/17|c.1481G>A|p.(G494D)|1628/73550|1481/2508|494/836||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000109204.7|Coding|10/14|c.1481G>A|p.(G494D)|1628/55267|1481/2142|494/714||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000223268.1|Coding|10/17|c.1481G>A|p.(G494D)|1583/73425|1481/2508|494/836||;allele_of_genes="MGI:109279";alleles="MGI:3625823";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.119369971C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5655836";strain_name="(C3H/HeH_x_BALB/c)F1";symbol="Nnt<sup>G745D</sup>";symbol_text="Nnt<G745D>"
13 119396924 NC_000079.6:g.119396924G>T G T . . ANN=T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000069902.12|Coding|3/15|c.204C>A|p.(N68K)|351/73550|204/2166|68/722||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000099149.9|Coding|3/17|c.204C>A|p.(N68K)|351/73550|204/2508|68/836||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000109204.7|Coding|3/14|c.204C>A|p.(N68K)|351/55267|204/2142|68/714||,T|missense_variant|MODERATE|Nnt|18115|transcript|ENSMUST00000223268.1|Coding|3/17|c.204C>A|p.(N68K)|306/73425|204/2508|68/836||,T|non_coding_transcript_exon_variant|LOW|Nnt|18115|transcript|ENSMUST00000133627.7|Noncoding|3/5|n.351C>A||351/21310||||,T|non_coding_transcript_exon_variant|LOW|Nnt|18115|transcript|ENSMUST00000144599.1|Noncoding|3/4|n.351C>A||351/15526||||;allele_of_genes="MGI:109279";alleles="MGI:3625821";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000079.6:g.119396924G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5655836";strain_name="(C3H/HeH_x_BALB/c)F1";symbol="Nnt<sup>N68K</sup>";symbol_text="Nnt<N68K>"
14 20509440 NC_000080.6:g.20509440A>T A T . . ANN=T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000022355.10|Coding|11/13|c.1247T>A|p.(M416K)|1319/46483|1247/1548|416/516||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000159027.7|Coding|11/14|c.1247T>A|p.(M416K)|1380/47210|1247/1578|416/526||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000161445.7|Coding|11/14|c.1244T>A|p.(M415K)|1351/46680|1244/1575|415/525||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000161989.1|Coding|11/12|c.1247T>A|p.(M416K)|1247/38770|1247/1494|416/498||;allele_of_genes="MGI:107163";alleles="MGI:6113605";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.20509440A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ppp3cb<sup>M4Btlr</sup>";symbol_text="Ppp3cb<M4Btlr>"
14 20528195 NC_000080.6:g.20528195G>T G T . . ANN=T|stop_gained|HIGH|Ppp3cb|19056|transcript|ENSMUST00000022355.10|Coding|4/13|c.486C>A|p.(C162*)|558/46483|486/1548|162/516||,T|stop_gained|HIGH|Ppp3cb|19056|transcript|ENSMUST00000159027.7|Coding|4/14|c.486C>A|p.(C162*)|619/47210|486/1578|162/526||,T|stop_gained|HIGH|Ppp3cb|19056|transcript|ENSMUST00000161445.7|Coding|4/14|c.486C>A|p.(C162*)|593/46680|486/1575|162/525||,T|stop_gained|HIGH|Ppp3cb|19056|transcript|ENSMUST00000161989.1|Coding|4/12|c.486C>A|p.(C162*)|486/38770|486/1494|162/498||;allele_of_genes="MGI:107163";alleles="MGI:6113566";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000080.6:g.20528195G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ppp3cb<sup>M3Btlr</sup>";symbol_text="Ppp3cb<M3Btlr>"
14 20530942 NC_000080.6:g.20530942A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ppp3cb|19056|transcript|ENSMUST00000022355.10|Coding|3/12|c.411+2T>C|p.?|484/46483|412/1548|138/516||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ppp3cb|19056|transcript|ENSMUST00000159027.7|Coding|3/13|c.411+2T>C|p.?|545/47210|412/1578|138/526||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ppp3cb|19056|transcript|ENSMUST00000161445.7|Coding|3/13|c.411+2T>C|p.?|519/46680|412/1575|138/525||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ppp3cb|19056|transcript|ENSMUST00000161989.1|Coding|3/11|c.411+2T>C|p.?|412/38770|412/1494|138/498||;allele_of_genes="MGI:107163";alleles="MGI:5806304";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000080.6:g.20530942A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ppp3cb<sup>M1Btlr</sup>";symbol_text="Ppp3cb<M1Btlr>"
14 20530948 NC_000080.6:g.20530948A>T A T . . ANN=T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000022355.10|Coding|3/13|c.407T>A|p.(I136K)|479/46483|407/1548|136/516||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000159027.7|Coding|3/14|c.407T>A|p.(I136K)|540/47210|407/1578|136/526||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000161445.7|Coding|3/14|c.407T>A|p.(I136K)|514/46680|407/1575|136/525||,T|missense_variant|MODERATE|Ppp3cb|19056|transcript|ENSMUST00000161989.1|Coding|3/12|c.407T>A|p.(I136K)|407/38770|407/1494|136/498||;allele_of_genes="MGI:107163";alleles="MGI:5806307";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.20530948A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ppp3cb<sup>m2Btlr</sup>";symbol_text="Ppp3cb<m2Btlr>"
14 28518564 NC_000080.6:g.28518564G>T G T . . ANN=T|stop_gained|HIGH|Wnt5a|22418|transcript|ENSMUST00000063465.11|Coding|4/5|c.670G>T|p.(E224*)|2029/22699|670/1143|224/381||,T|stop_gained|HIGH|Wnt5a|22418|transcript|ENSMUST00000112272.1|Coding|4/5|c.610G>T|p.(E204*)|683/14030|610/1083|204/361||,T|non_coding_transcript_exon_variant|LOW|Wnt5a|22418|transcript|ENSMUST00000134163.1|Noncoding|3/4|n.1097G>T||1097/12128||||;allele_of_genes="MGI:98958";alleles="MGI:5646613";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000080.6:g.28518564G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Wnt5a<sup>b2b3077.1Clo</sup>";symbol_text="Wnt5a<b2b3077.1Clo>"
14 31208377 NC_000080.6:g.31208377C>T C T . . ANN=T|missense_variant&splice_region_variant|MODERATE|Tnnc1|21924|transcript|ENSMUST00000169169.7|Coding|1/6|c.23C>T|p.(A8V)|66/3418|23/486|8/162||,T|missense_variant&splice_region_variant|MODERATE|Tnnc1|21924|transcript|ENSMUST00000170268.1|Coding|1/6|c.23C>T|p.(A8V)|48/3307|23/321|8/107||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Tnnc1|21924|transcript|ENSMUST00000161399.1|Noncoding|1/4|n.46C>T||46/2667||||,T|non_coding_transcript_intron_variant|LOW|Nisch|64652|transcript|ENSMUST00000167602.1|Noncoding|1/3|n.134-1313G>A||134/13641||||;allele_of_genes="MGI:98779";alleles="MGI:6304486";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000080.6:g.31208377C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Tnnc1<sup>tm1.1Jrpi</sup>";symbol_text="Tnnc1<tm1.1Jrpi>"
14 47016337 NC_000080.6:g.47016337A>C A C . . ANN=C|missense_variant|MODERATE|Samd4|74480|transcript|ENSMUST00000022386.14|Coding|3/13|c.257A>C|p.(H86P)|994/220297|257/2136|86/712||,C|missense_variant|MODERATE|Samd4|74480|transcript|ENSMUST00000100672.10|Coding|3/12|c.257A>C|p.(H86P)|859/220162|257/1872|86/624||,C|missense_variant|MODERATE|Samd4|74480|transcript|ENSMUST00000137543.8|Coding|2/11|c.257A>C|p.(H86P)|903/221641|257/1872|86/624||,C|5_prime_UTR_exon_variant|LOW|Samd4|74480|transcript|ENSMUST00000125113.8|Coding|2/12|c.-47A>C|p.(%3D)|388/100320|1/1833|1/611||,C|5_prime_UTR_exon_variant|LOW|Samd4|74480|transcript|ENSMUST00000228404.1|Coding|4/13|c.-47A>C|p.(%3D)|660/219244|1/1569|1/523||;allele_of_genes="MGI:1921730";alleles="MGI:5547989";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.47016337A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Samd4<sup>m1Btlr</sup>";symbol_text="Samd4<m1Btlr>"
14 54958525 NC_000080.6:g.54958525C>T C T . . ANN=T|missense_variant|MODERATE|Myh6|17888|transcript|ENSMUST00000081857.13|Coding|15/39|c.1816G>A|p.(V606M)|2052/24721|1816/5817|606/1939||,T|missense_variant|MODERATE|Myh6|17888|transcript|ENSMUST00000226297.1|Coding|15/39|c.1816G>A|p.(V606M)|1952/24680|1816/5817|606/1939||;allele_of_genes="MGI:97255";alleles="MGI:6356699";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.54958525C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653381";strain_name="129/SvEv";symbol="Myh6<sup>tm1.1Jpsc</sup>";symbol_text="Myh6<tm1.1Jpsc>"
14 55605910 NC_000080.6:g.55605910T>C T C . . ANN=C|splice_region_variant&coding_transcript_intron_variant|LOW|Irf9|16391|transcript|ENSMUST00000130697.7|Coding|3/8|c.364+6T>C|p.?|625/6046|365/1200|122/400||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Irf9|16391|transcript|ENSMUST00000134863.7|Coding|4/9|c.562+6T>C|p.?|1125/6460|563/1398|188/466||,C|splice_region_variant&coding_transcript_intron_variant|LOW|Irf9|16391|transcript|ENSMUST00000138037.1|Coding|3/8|c.418+6T>C|p.?|509/5452|419/1254|140/418||,C|splice_region_variant&non_coding_transcript_intron_variant|LOW|Irf9|16391|transcript|ENSMUST00000145680.1|Noncoding|1/2|n.85+6T>C||86/4208||||;allele_of_genes="MGI:107587";alleles="MGI:5806324";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000080.6:g.55605910T>C";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irf9<sup>M1Btlr</sup>";symbol_text="Irf9<M1Btlr>"
14 55680230 NC_000080.6:g.55680230_55680232delinsCTC TTT CTC . . ANN=CTC|mnv|HIGH|Tinf2|28113|transcript|ENSMUST00000007733.7|Coding|6/9|c.799_801delAAAinsGAG|p.(K267E)|1038/3955|799/1245|267/415||,CTC|mnv|HIGH|Tinf2|28113|transcript|ENSMUST00000227842.1|Coding|6/9|c.799_801delAAAinsGAG|p.(K267E)|963/5128|799/1260|267/420||,CTC|non_coding_transcript_exon_variant|LOW|Tinf2|28113|transcript|ENSMUST00000226641.1|Noncoding|4/4|n.1250_1252delAAAinsGAG||1250/1585||||,CTC|non_coding_transcript_exon_variant|LOW|Tinf2|28113|transcript|ENSMUST00000227996.1|Noncoding|3/3|n.704_706delAAAinsGAG||704/3558||||,CTC|non_coding_transcript_exon_variant|LOW|Tinf2|28113|transcript|ENSMUST00000228264.1|Noncoding|5/8|n.1158_1160delAAAinsGAG||1158/3975||||;allele_of_genes="MGI:107246,MGI:107246";alleles="MGI:5556226,MGI:5556226";geneLevelConsequence="intron_variant,missense_variant";hgvs_nomenclature="NC_000080.6:g.55680230_55680232delinsCTC";impact="MODIFIER,MODERATE";soTerm="MNV";strain_id="MGI:2163869";strain_name="B6(Cg)-Tyr<c-2J>/J";symbol="Tinf2<sup>tm2.1Tdl</sup>";symbol_text="Tinf2<tm2.1Tdl>"
14 55788237 NC_000080.6:g.55788237C>T C T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ripk3|56532|transcript|ENSMUST00000022830.13|Coding|2/9|c.164+1G>A|p.?|394/3871|165/1461|55/487||,T|splice_donor_variant&5_prime_UTR_intron_variant|HIGH|Ripk3|56532|transcript|ENSMUST00000168716.7|Coding|2/9|c.-29+1G>A|p.(%3D)|467/3862|1/1269|1/423||,T|splice_donor_variant&5_prime_UTR_intron_variant|HIGH|Ripk3|56532|transcript|ENSMUST00000178399.2|Coding|2/9|c.-29+1G>A|p.(%3D)|369/3861|1/1269|1/423||,T|splice_donor_variant&5_prime_UTR_intron_variant|HIGH|Ripk3|56532|transcript|ENSMUST00000228326.1|Coding|1/3|c.-29+1G>A|p.(%3D)|156/1267|1/475|1/158||;allele_of_genes="MGI:2154952,MGI:2154952";alleles="MGI:5705237,MGI:5705237";geneLevelConsequence="intron_variant,non_coding_transcript_variant,splice_donor_variant";hgvs_nomenclature="NC_000080.6:g.55788237C>T";impact="MODIFIER,HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ripk3<sup>m1Btlr</sup>";symbol_text="Ripk3<m1Btlr>"
14 58109379 NC_000080.6:g.58109379A>C A C . . ANN=C|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000022545.13|Coding|3/3|c.428A>C|p.(N143T)|798/37489|428/627|143/209||,C|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000074654.11|Coding|3/3|c.77A>C|p.(N26T)|403/35060|77/276|26/92||,C|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000165526.8|Coding|3/3|c.77A>C|p.(N26T)|252/42174|77/276|26/92||,C|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000166770.1|Coding|3/3|c.77A>C|p.(N26T)|308/32886|77/90|26/30||;allele_of_genes="MGI:104723";alleles="MGI:2182127";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.58109379A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651396";strain_name="C57BL/6J_x_DBA/2J";symbol="Fgf9<sup>Eks</sup>";symbol_text="Fgf9<Eks>"
14 58109436 NC_000080.6:g.58109436A>G A G . . ANN=G|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000022545.13|Coding|3/3|c.485A>G|p.(Y162C)|855/37489|485/627|162/209||,G|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000074654.11|Coding|3/3|c.134A>G|p.(Y45C)|460/35060|134/276|45/92||,G|missense_variant|MODERATE|Fgf9|14180|transcript|ENSMUST00000165526.8|Coding|3/3|c.134A>G|p.(Y45C)|309/42174|134/276|45/92||;allele_of_genes="MGI:104723";alleles="MGI:5293829";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.58109436A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Fgf9<sup>Aca12</sup>";symbol_text="Fgf9<Aca12>"
14 67746418 NC_000080.6:g.67746418T>C T C . . ANN=C|missense_variant|MODERATE|Gnrh1|14714|transcript|ENSMUST00000111095.3|Coding|2/4|c.73T>C|p.(S25P)|138/4172|73/273|25/91||,C|missense_variant|MODERATE|Gnrh1|14714|transcript|ENSMUST00000223951.1|Coding|1/3|c.73T>C|p.(S25P)|149/3084|73/273|25/91||,C|5_prime_UTR_intron_variant|LOW|Gnrh1|14714|transcript|ENSMUST00000223929.1|Coding|1/2|c.-1+1093T>C|p.(%3D)|146/4256|1/138|1/46||;allele_of_genes="MGI:95789";alleles="MGI:5792105";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.67746418T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gnrh1<sup>mpc294H</sup>";symbol_text="Gnrh1<mpc294H>"
14 78278695 NC_000080.6:g.78278695C>T C T . . ANN=T|missense_variant|MODERATE|Tnfsf11|21943|transcript|ENSMUST00000022592.7|Coding|5/5|c.832G>A|p.(G278R)|986/30599|832/951|278/317||;allele_of_genes="MGI:1100089";alleles="MGI:5307891";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.78278695C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5658161";strain_name="C57BL/6J_x_129S6/SvEvTac";symbol="Tnfsf11<sup>tles</sup>";symbol_text="Tnfsf11<tles>"
14 103821735 NC_000080.6:g.103821735G>A G A . . ANN=A|missense_variant|MODERATE|Ednrb|13618|transcript|ENSMUST00000022718.10|Coding|5/8|c.854C>T|p.(P285L)|1191/29778|854/1329|285/443||,A|missense_variant|MODERATE|Ednrb|13618|transcript|ENSMUST00000172237.1|Coding|4/7|c.854C>T|p.(P285L)|1074/29071|854/1329|285/443||,A|missense_variant|MODERATE|Ednrb|13618|transcript|ENSMUST00000227824.1|Coding|4/8|c.854C>T|p.(P285L)|1073/28968|854/1329|285/443||;allele_of_genes="MGI:102720,MGI:102720";alleles="MGI:1857332,MGI:1857332";geneLevelConsequence="intron_variant,non_coding_transcript_variant,missense_variant";hgvs_nomenclature="NC_000080.6:g.103821735G>A";impact="MODIFIER,MODERATE";soTerm="point_mutation";strain_id="MGI:5651768";strain_name="(101/Rl_x_C3H/Rl)F1";symbol="Ednrb<sup>s-27Pub</sup>";symbol_text="Ednrb<s-27Pub>"
14 103823274 NC_000080.6:g.103823274A>T A T . . ANN=T|coding_transcript_intron_variant|LOW|Ednrb|13618|transcript|ENSMUST00000022718.10|Coding|3/7|c.597-15T>A|p.(%3D)|934/29778|597/1329|199/443||,T|coding_transcript_intron_variant|LOW|Ednrb|13618|transcript|ENSMUST00000172237.1|Coding|2/6|c.597-15T>A|p.(%3D)|817/29071|597/1329|199/443||,T|coding_transcript_intron_variant|LOW|Ednrb|13618|transcript|ENSMUST00000227824.1|Coding|2/7|c.597-15T>A|p.(%3D)|816/28968|597/1329|199/443||;allele_of_genes="MGI:102720,MGI:102720";alleles="MGI:5607170,MGI:5607170";geneLevelConsequence="intron_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000080.6:g.103823274A>T";impact="MODIFIER,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ednrb<sup>s-2Btlr</sup>";symbol_text="Ednrb<s-2Btlr>"
14 118013129 NC_000080.6:g.118013129C>T C T . . ANN=T|missense_variant|MODERATE|Dct|13190|transcript|ENSMUST00000022725.3|Coding|8/8|c.1456G>A|p.(G486R)|1863/39396|1456/1554|486/518||;allele_of_genes="MGI:102563,MGI:102563,MGI:102563,MGI:102563";alleles="MGI:1856381,MGI:1856381,MGI:1856381,MGI:1856381";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000080.6:g.118013129C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2159741";strain_name="C3H/HeJ";symbol="Dct<sup>Slt-lt</sup>";symbol_text="Dct<Slt-lt>"
14 118013129 NC_000080.6:g.118013129C>T C T . . ANN=T|missense_variant|MODERATE|Dct|13190|transcript|ENSMUST00000022725.3|Coding|8/8|c.1456G>A|p.(G486R)|1863/39396|1456/1554|486/518||;allele_of_genes="MGI:102563,MGI:102563,MGI:102563,MGI:102563";alleles="MGI:3040516,MGI:3040516,MGI:3040516,MGI:3040516";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000080.6:g.118013129C>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2161625";strain_name="B6.Cg-Lep<ob>/J";symbol="Dct<sup>Slt-lt3J</sup>";symbol_text="Dct<Slt-lt3J>"
14 118018672 NC_000080.6:g.118018672G>A G A . . ANN=A|missense_variant|MODERATE|Dct|13190|transcript|ENSMUST00000022725.3|Coding|7/8|c.1301C>T|p.(P434L)|1708/39396|1301/1554|434/518||;allele_of_genes="MGI:102563";alleles="MGI:1856380";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.118018672G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2385782";strain_name="NXSMC/EiJ";symbol="Dct<sup>slt-2J</sup>";symbol_text="Dct<slt-2J>"
14 118043022 NC_000080.6:g.118043022C>T C T . . ANN=T|missense_variant|MODERATE|Dct|13190|transcript|ENSMUST00000022725.3|Coding|2/8|c.581G>A|p.(R194Q)|988/39396|581/1554|194/518||,T|non_coding_transcript_exon_variant|LOW|Dct|13190|transcript|ENSMUST00000227850.1|Noncoding|1/3|n.108G>A||108/3695||||,T|non_coding_transcript_exon_variant|LOW|Dct|13190|transcript|ENSMUST00000228548.1|Noncoding|2/7|n.1047G>A||1047/27469||||;allele_of_genes="MGI:102563";alleles="MGI:1856379";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.118043022C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3042402";strain_name="STOCK_Grem1<ld-J>_Atrn<mg>";symbol="Dct<sup>slt</sup>";symbol_text="Dct<slt>"
14 122476661 NC_000080.6:g.122476661A>T A T . . ANN=T|missense_variant|MODERATE|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|1/3|c.986A>T|p.(E329V)|1227/4418|986/1590|329/530||;allele_of_genes="MGI:106679";alleles="MGI:4943187";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000080.6:g.122476661A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zic2<sup>m1Nisw</sup>";symbol_text="Zic2<m1Nisw>"
14 122478639 NC_000080.6:g.122478641_122478644del CCTAT C . . ANN=C|frameshift_truncation|HIGH|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1175_1178del|p.(Y392Sfs*19)|1416/4418|1175/1590|392/530||INFO_REALIGN_3_PRIME,C|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.543_546del||543/951||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:106679";alleles="MGI:5566852";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000080.6:g.122478641_122478644del";impact="HIGH";soTerm="deletion";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Zic2<sup>em1Bend</sup>";symbol_text="Zic2<em1Bend>"
14 122478641 NC_000080.6:g.122478641_122478641insT T TT . . ANN=TT|frameshift_variant|HIGH|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1174dup|p.(Y392Lfs*7)|1415/4418|1174/1590|392/530||,TT|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.542dup||542/951||||;allele_of_genes="MGI:106679";alleles="MGI:5566852";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000080.6:g.122478641_122478641insT";impact="HIGH";soTerm="insertion";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Zic2<sup>em1Bend</sup>";symbol_text="Zic2<em1Bend>"
14 122478662 NC_000080.6:g.122478663_122478665del AAGT A . . ANN=A|disruptive_inframe_deletion|MODERATE|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1196_1198del|p.(K399_S400delinsT)|1437/4418|1196/1590|399/530||,A|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.564_566del||564/951||||;allele_of_genes="MGI:106679";alleles="MGI:5566855";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000080.6:g.122478663_122478665del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Zic2<sup>em4Bend</sup>";symbol_text="Zic2<em4Bend>"
14 122478666 NC_000080.6:g.122478667_122478678del CCTACACGCATCC C . . ANN=C|inframe_deletion|MODERATE|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1201_1212del|p.(Y401_P404del)|1442/4418|1201/1590|401/530||INFO_REALIGN_3_PRIME,C|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.569_580del||569/951||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:106679";alleles="MGI:5566853";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000080.6:g.122478667_122478678del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Zic2<sup>em2Bend</sup>";symbol_text="Zic2<em2Bend>"
14 122478666 NC_000080.6:g.122478667_122478680del CCTACACGCATCCCA C . . ANN=C|frameshift_truncation|HIGH|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1200_1213del|p.(T402Vfs*9)|1441/4418|1200/1590|400/530||,C|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.568_581del||568/951||||;allele_of_genes="MGI:106679";alleles="MGI:5566856";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000080.6:g.122478667_122478680del";impact="HIGH";soTerm="deletion";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Zic2<sup>em5Bend</sup>";symbol_text="Zic2<em5Bend>"
14 122478667 NC_000080.6:g.122478667_122478667insC C CC . . ANN=CC|frameshift_variant|HIGH|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1200dup|p.(Y401Lfs*15)|1441/4418|1200/1590|400/530||,CC|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.568dup||568/951||||;allele_of_genes="MGI:106679,MGI:106679";alleles="MGI:5566856,MGI:5566856";geneLevelConsequence="frameshift_variant,frameshift_variant";hgvs_nomenclature="NC_000080.6:g.122478667_122478667insC";impact="HIGH,HIGH";soTerm="insertion";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Zic2<sup>em5Bend</sup>";symbol_text="Zic2<em5Bend>"
14 122478668 NC_000080.6:g.122478669_122478670del TAC T . . ANN=T|frameshift_truncation|HIGH|Zic2|22772|transcript|ENSMUST00000075888.5|Coding|2/3|c.1204_1205del|p.(T402Afs*13)|1445/4418|1204/1590|402/530||INFO_REALIGN_3_PRIME,T|non_coding_transcript_exon_variant|LOW|Zic2|22772|transcript|ENSMUST00000137059.1|Noncoding|1/2|n.572_573del||572/951||||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:106679";alleles="MGI:5566854";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000080.6:g.122478669_122478670del";impact="HIGH";soTerm="deletion";strain_id="MGI:2159743";strain_name="C3H/HeH";symbol="Zic2<sup>em3Bend</sup>";symbol_text="Zic2<em3Bend>"
15 8179837 NC_000081.6:g.8179837T>C T C . . ANN=C|missense_variant|MODERATE|Cplane1|73692|transcript|ENSMUST00000110617.1|Coding|8/53|c.757T>C|p.(S253P)|1278/102053|757/9645|253/3215||;allele_of_genes="MGI:1920942";alleles="MGI:5297398";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.8179837T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cplane1<sup>b2b012Clo</sup>";symbol_text="Cplane1<b2b012Clo>"
15 11000817 NC_000081.6:g.11000817A>T A T . . ANN=T|start_lost&missense_variant|HIGH|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|1/7|c.1A>T|p.0?|97/28513|1/1593|1/531||;allele_of_genes="MGI:2153040";alleles="MGI:5578029";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000081.6:g.11000817A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-9Btlr</sup>";symbol_text="Slc45a2<uw-9Btlr>"
15 11001092 NC_000081.6:g.11001092T>G T G . . ANN=G|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|1/7|c.276T>G|p.(S92R)|372/28513|276/1593|92/531||;allele_of_genes="MGI:2153040";alleles="MGI:5141321";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.11001092T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-7Btlr</sup>";symbol_text="Slc45a2<uw-7Btlr>"
15 11002899 NC_000081.6:g.11002899G>A G A . . ANN=A|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|2/7|c.457G>A|p.(D153N)|553/28513|457/1593|153/531||;allele_of_genes="MGI:2153040";alleles="MGI:1856227";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.11002899G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161016";strain_name="B10.PL-H2<u>/(73NS)Sn";symbol="Slc45a2<sup>Uw-dbr</sup>";symbol_text="Slc45a2<Uw-dbr>"
15 11002981 NC_000081.6:g.11002981T>C T C . . ANN=C|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|2/7|c.539T>C|p.(L180P)|635/28513|539/1593|180/531||;allele_of_genes="MGI:2153040";alleles="MGI:3784982";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.11002981T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-3Btlr</sup>";symbol_text="Slc45a2<uw-3Btlr>"
15 11012610 NC_000081.6:g.11012610A>C A C . . ANN=C|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|3/7|c.698A>C|p.(H233P)|794/28513|698/1593|233/531||;allele_of_genes="MGI:2153040";alleles="MGI:3784986";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.11012610A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-4Btlr</sup>";symbol_text="Slc45a2<uw-4Btlr>"
15 11012666 NC_000081.6:g.11012666C>T C T . . ANN=T|stop_gained|HIGH|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|3/7|c.754C>T|p.(Q252*)|850/28513|754/1593|252/531||;allele_of_genes="MGI:2153040";alleles="MGI:3784980";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.11012666C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-2Btlr</sup>";symbol_text="Slc45a2<uw-2Btlr>"
15 11022171 NC_000081.6:g.11022171C>A C A . . ANN=A|stop_gained|HIGH|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|4/7|c.998C>A|p.(S333*)|1094/28513|998/1593|333/531||;allele_of_genes="MGI:2153040";alleles="MGI:3784977";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.11022171C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-Btlr</sup>";symbol_text="Slc45a2<uw-Btlr>"
15 11023443 NC_000081.6:g.11023443T>C T C . . ANN=C|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|5/7|c.1132T>C|p.(S378P)|1228/28513|1132/1593|378/531||;allele_of_genes="MGI:2153040";alleles="MGI:4420315";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.11023443T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-5Btlr</sup>";symbol_text="Slc45a2<uw-5Btlr>"
15 11025868 NC_000081.6:g.11025868T>C T C . . ANN=C|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|6/7|c.1303T>C|p.(S435P)|1399/28513|1303/1593|435/531||;allele_of_genes="MGI:2153040,MGI:2153040,MGI:2153040,MGI:2153040";alleles="MGI:5515378,MGI:5515378,MGI:5515378,MGI:5515378";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000081.6:g.11025868T>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-8Btlr</sup>";symbol_text="Slc45a2<uw-8Btlr>"
15 11025868 NC_000081.6:g.11025868T>C T C . . ANN=C|missense_variant|MODERATE|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|6/7|c.1303T>C|p.(S435P)|1399/28513|1303/1593|435/531||;allele_of_genes="MGI:2153040,MGI:2153040,MGI:2153040,MGI:2153040";alleles="MGI:1857540,MGI:1857540,MGI:1857540,MGI:1857540";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000081.6:g.11025868T>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2162168";strain_name="TF/Le";symbol="Slc45a2<sup>uw-d</sup>";symbol_text="Slc45a2<uw-d>"
15 11025934 NC_000081.6:g.11025934G>T G T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Slc45a2|22293|transcript|ENSMUST00000117100.3|Coding|6/6|c.1368+1G>T|p.?|1465/28513|1369/1593|457/531||;allele_of_genes="MGI:2153040";alleles="MGI:4420306";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000081.6:g.11025934G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc45a2<sup>uw-6Btlr</sup>";symbol_text="Slc45a2<uw-6Btlr>"
15 25781265 NC_000081.6:g.25781266_25781274del ATCGACGAGT A . . ANN=A|disruptive_inframe_deletion|MODERATE|Myo10|17909|transcript|ENSMUST00000022882.11|Coding|5/21|c.608_616del|p.(I203_C206delinsS)|1088/60762|608/3951|203/1317||,A|disruptive_inframe_deletion|MODERATE|Myo10|17909|transcript|ENSMUST00000110457.7|Coding|25/41|c.2846_2854del|p.(I949_C952delinsS)|3331/191149|2846/6189|949/2063||,A|non_coding_transcript_exon_variant|LOW|Myo10|17909|transcript|ENSMUST00000145587.1|Noncoding|2/2|n.516_524del||516/1179||||;allele_of_genes="MGI:107716";alleles="MGI:5578506";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000081.6:g.25781266_25781274del";impact="MODERATE";soTerm="deletion";strain_id="MGI:2161626";strain_name="B6.129S2-Cd4<tm1Mak>/J";symbol="Myo10<sup>m1J</sup>";symbol_text="Myo10<m1J>"
15 28229661 NC_000081.6:g.28229661T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|4/78|c.438+2T>A|p.?|666/268301|439/13866|147/4622||;allele_of_genes="MGI:107718";alleles="MGI:5311153";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000081.6:g.28229661T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b601Clo</sup>";symbol_text="Dnah5<b2b601Clo>"
15 28247979 NC_000081.6:g.28247979T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|15/78|c.2259+2T>A|p.?|2487/268301|2260/13866|754/4622||;allele_of_genes="MGI:107718";alleles="MGI:5618818";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000081.6:g.28247979T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b2925Clo</sup>";symbol_text="Dnah5<b2b2925Clo>"
15 28270308 NC_000081.6:g.28270308C>A C A . . ANN=A|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|19/79|c.2755C>A|p.(H919N)|2982/268301|2755/13866|919/4622||;allele_of_genes="MGI:107718";alleles="MGI:5311386";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28270308C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b1154Clo</sup>";symbol_text="Dnah5<b2b1154Clo>"
15 28312186 NC_000081.6:g.28312186T>C T C . . ANN=C|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|34/79|c.5503T>C|p.(W1835R)|5730/268301|5503/13866|1835/4622||;allele_of_genes="MGI:107718";alleles="MGI:5297426";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28312186T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b1003Clo</sup>";symbol_text="Dnah5<b2b1003Clo>"
15 28335655 NC_000081.6:g.28335655A>T A T . . ANN=T|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|41/79|c.6766A>T|p.(M2256L)|6993/268301|6766/13866|2256/4622||;allele_of_genes="MGI:107718";alleles="MGI:5648248";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28335655A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b3491Clo</sup>";symbol_text="Dnah5<b2b3491Clo>"
15 28345915 NC_000081.6:g.28345915T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|44/78|c.7398+2T>A|p.?|7626/268301|7399/13866|2467/4622||;allele_of_genes="MGI:107718";alleles="MGI:5552945";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000081.6:g.28345915T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Dnah5<sup>b2b2395Clo</sup>";symbol_text="Dnah5<b2b2395Clo>"
15 28365630 NC_000081.6:g.28365630T>G T G . . ANN=G|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|48/79|c.7971T>G|p.(N2657K)|8198/268301|7971/13866|2657/4622||;allele_of_genes="MGI:107718";alleles="MGI:5311385";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28365630T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b1134Clo</sup>";symbol_text="Dnah5<b2b1134Clo>"
15 28366288 NC_000081.6:g.28366288C>T C T . . ANN=T|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|49/79|c.8146C>T|p.(R2716C)|8373/268301|8146/13866|2716/4622||;allele_of_genes="MGI:107718";alleles="MGI:5645238";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28366288C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b2451Clo</sup>";symbol_text="Dnah5<b2b2451Clo>"
15 28367844 NC_000081.6:g.28367844C>T C T . . ANN=T|stop_gained|HIGH|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|50/79|c.8374C>T|p.(R2792*)|8601/268301|8374/13866|2792/4622||;allele_of_genes="MGI:107718";alleles="MGI:5614979";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.28367844C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b2570Clo</sup>";symbol_text="Dnah5<b2b2570Clo>"
15 28397210 NC_000081.6:g.28397210T>C T C . . ANN=C|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|59/79|c.10048T>C|p.(S3350P)|10275/268301|10048/13866|3350/4622||;allele_of_genes="MGI:107718";alleles="MGI:5285078";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28397210T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b016Clo</sup>";symbol_text="Dnah5<b2b016Clo>"
15 28453253 NC_000081.6:g.28453253T>C T C . . ANN=C|missense_variant|MODERATE|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|76/79|c.13169T>C|p.(L4390P)|13396/268301|13169/13866|4390/4622||;allele_of_genes="MGI:107718";alleles="MGI:5294340";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.28453253T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b002Clo</sup>";symbol_text="Dnah5<b2b002Clo>"
15 28458538 NC_000081.6:g.28458538T>A T A . . ANN=A|coding_transcript_intron_variant|LOW|Dnah5|110082|transcript|ENSMUST00000067048.7|Coding|76/78|c.13330-10T>A|p.(%3D)|13557/268301|13330/13866|4444/4622||;allele_of_genes="MGI:107718";alleles="MGI:5433326";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000081.6:g.28458538T>A";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dnah5<sup>b2b1537Clo</sup>";symbol_text="Dnah5<b2b1537Clo>"
15 52712639 NC_000081.6:g.52712639A>T A T . . ANN=T|missense_variant|MODERATE|Med30|69790|transcript|ENSMUST00000037115.8|Coding|1/4|c.130A>T|p.(I44F)|198/18123|130/537|44/179||,T|non_coding_transcript_exon_variant|LOW|Med30|69790|transcript|ENSMUST00000228053.1|Noncoding|1/2|n.232A>T||232/2865||||;allele_of_genes="MGI:1917040";alleles="MGI:5306897";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.52712639A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Med30<sup>m1Btlr</sup>";symbol_text="Med30<m1Btlr>"
15 59324554 NC_000081.6:g.59324554C>T C T . . ANN=T|stop_gained|HIGH|Sqle|20775|transcript|ENSMUST00000022977.13|Coding|7/11|c.1195C>T|p.(R399*)|1959/16112|1195/1719|399/573||,T|coding_transcript_intron_variant|LOW|Sqle|20775|transcript|ENSMUST00000100640.4|Coding|6/9|c.1102+576C>T|p.(%3D)|1841/16086|1103/1623|368/541||,T|non_coding_transcript_exon_variant|LOW|Sqle|20775|transcript|ENSMUST00000162142.1|Noncoding|7/9|n.1932C>T||1932/13882||||;allele_of_genes="MGI:109296";alleles="MGI:5489914";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.59324554C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sqle<sup>Sum3-Jus</sup>";symbol_text="Sqle<Sum3-Jus>"
15 76668380 NC_000081.6:g.76668380T>G T G . . ANN=G|missense_variant|MODERATE|Foxh1|14106|transcript|ENSMUST00000037824.5|Coding|3/3|c.1133A>C|p.(D378A)|1210/1724|1133/1206|378/402||;allele_of_genes="MGI:1347465";alleles="MGI:5615244";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.76668380T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Foxh1<sup>b2b2662Clo</sup>";symbol_text="Foxh1<b2b2662Clo>"
15 77763293 NC_000081.6:g.77763293C>T C T . . ANN=T|missense_variant|MODERATE|Myh9|17886|transcript|ENSMUST00000016771.12|Coding|39/41|c.5521G>A|p.(E1841K)|5759/81589|5521/5883|1841/1961||;allele_of_genes="MGI:107717";alleles="MGI:5285646";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.77763293C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Myh9<sup>tm1.1(MYH9*)Mjk</sup>";symbol_text="Myh9<tm1.1(MYH9*)Mjk>"
15 77768864 NC_000081.6:g.77768864_77768866delinsATT GTC ATT . . ANN=ATT|mnv|HIGH|Myh9|17886|transcript|ENSMUST00000016771.12|Coding|31/41|c.4270_4272delGACinsAAT|p.(D1424N)|4508/81589|4270/5883|1424/1961||,ATT|coding_transcript_intron_variant|LOW|Myh9|17886|transcript|ENSMUST00000229259.1|Coding|3/4|c.226+380_226+382delGACinsAAT|p.(%3D)|227/5819|227/329|76/109||;allele_of_genes="MGI:107717";alleles="MGI:5285643";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.77768864_77768866delinsATT";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Myh9<sup>tm7.1Rsad</sup>";symbol_text="Myh9<tm7.1Rsad>"
15 78250916 NC_000081.6:g.78250916_78250917delinsGC CG GC . . ANN=GC|mnv|HIGH|Ncf4|17972|transcript|ENSMUST00000096357.11|Coding|3/10|c.172_173delCGinsGC|p.(R58A)|427/17780|172/1020|58/340||,GC|mnv|HIGH|Ncf4|17972|transcript|ENSMUST00000133618.2|Coding|4/9|c.172_173delCGinsGC|p.(R58A)|206/15911|172/758|58/252||;allele_of_genes="MGI:109186";alleles="MGI:3701805";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.78250916_78250917delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Ncf4<sup>tm1Pth</sup>";symbol_text="Ncf4<tm1Pth>"
15 78459427 NC_000081.6:g.78459427T>A T A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000017086.4|Coding|6/17|c.658+3A>T|p.?|868/28968|659/2436|220/812||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000229516.1|Coding|5/13|c.658+3A>T|p.?|659/22876|659/1785|220/595||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000230159.1|Coding|5/13|c.658+3A>T|p.?|659/21559|659/1746|220/582||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000230226.1|Coding|6/17|c.622+3A>T|p.?|808/28937|623/2400|208/800||,A|5_prime_UTR_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000229124.1|Coding|1/5|c.-206-6523A>T|p.(%3D)|177/23305|1/363|1/121||;allele_of_genes="MGI:1919003";alleles="MGI:5806439";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000081.6:g.78459427T>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmprss6<sup>m5Btlr</sup>";symbol_text="Tmprss6<m5Btlr>"
15 78464552 NC_000081.6:g.78464552C>T C T . . ANN=T|coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000017086.4|Coding|2/17|c.235+557G>A|p.(%3D)|445/28968|236/2436|79/812||,T|coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000229516.1|Coding|1/13|c.235+557G>A|p.(%3D)|236/22876|236/1785|79/595||,T|coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000230159.1|Coding|1/13|c.235+557G>A|p.(%3D)|236/21559|236/1746|79/582||,T|coding_transcript_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000230226.1|Coding|2/17|c.199+557G>A|p.(%3D)|385/28937|200/2400|67/800||,T|5_prime_UTR_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000229124.1|Coding|1/5|c.-207+3874G>A|p.(%3D)|177/23305|1/363|1/121||;allele_of_genes="MGI:1919003";alleles="MGI:3812005";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000081.6:g.78464552C>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmprss6<sup>m2Btlr</sup>";symbol_text="Tmprss6<m2Btlr>"
15 78468000 NC_000081.6:g.78468000C>T C T . . ANN=T|5_prime_UTR_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000017086.4|Coding|1/17|c.-1+426G>A|p.(%3D)|210/28968|1/2436|1/812||,T|5_prime_UTR_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000229124.1|Coding|1/5|c.-207+426G>A|p.(%3D)|177/23305|1/363|1/121||,T|5_prime_UTR_intron_variant|LOW|Tmprss6|71753|transcript|ENSMUST00000230226.1|Coding|1/17|c.-2+426G>A|p.(%3D)|185/28937|1/2400|1/800||;allele_of_genes="MGI:1919003";alleles="MGI:3829007";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000081.6:g.78468000C>T";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tmprss6<sup>m3Btlr</sup>";symbol_text="Tmprss6<m3Btlr>"
15 79584341 NC_000081.6:g.79584341_79584342delinsGG CA GG . . ANN=GG|mnv|HIGH|Dmc1|13404|transcript|ENSMUST00000023065.7|Coding|12/14|c.813_814delTGinsCC|p.(A272P)|993/43612|813/1023|271/341||,GG|mnv|HIGH|Dmc1|13404|transcript|ENSMUST00000229408.1|Coding|10/12|c.648_649delTGinsCC|p.(A217P)|819/43489|648/858|216/286||,GG|3_prime_UTR_exon_variant|LOW|Dmc1|13404|transcript|ENSMUST00000230011.1|Coding|7/9|c.*108_*109delTGinsCC|p.(%3D)|619/43540|331/330|111/110||,GG|non_coding_transcript_exon_variant|LOW|Dmc1|13404|transcript|ENSMUST00000229472.1|Noncoding|3/5|n.340_341delTGinsCC||340/23585||||,GG|non_coding_transcript_exon_variant|LOW|Dmc1|13404|transcript|ENSMUST00000230121.1|Noncoding|2/4|n.117_118delTGinsCC||117/22868||||;allele_of_genes="MGI:105393";alleles="MGI:2177010";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.79584341_79584342delinsGG";impact="MODERATE";soTerm="MNV";strain_id="MGI:5651462";strain_name="(C57BL/6J_x_129S4/SvJae)F1";symbol="Dmc1<sup>Mei11</sup>";symbol_text="Dmc1<Mei11>"
15 80157617 NC_000081.6:g.80157617T>A T A . . ANN=A|missense_variant|MODERATE|Tab1|66513|transcript|ENSMUST00000023050.8|Coding|9/11|c.935T>A|p.(M312K)|964/28581|935/1509|312/503||;allele_of_genes="MGI:1913763";alleles="MGI:5314079";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.80157617T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tab1<sup>b2b449Clo</sup>";symbol_text="Tab1<b2b449Clo>"
15 82203236 NC_000081.6:g.82203236C>T C T . . ANN=T|missense_variant|MODERATE|Srebf2|20788|transcript|ENSMUST00000023100.7|Coding|18/19|c.3112C>T|p.(R1038C)|3334/58199|3112/3393|1038/1131||,T|missense_variant|MODERATE|Srebf2|20788|transcript|ENSMUST00000229336.1|Coding|19/21|c.2992C>T|p.(R998C)|3191/57472|2992/3291|998/1097||,T|missense_variant|MODERATE|Srebf2|20788|transcript|ENSMUST00000230955.1|Coding|5/6|c.557C>T|p.(P186L)|557/8848|557/740|186/246||;allele_of_genes="MGI:107585";alleles="MGI:1856940";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.82203236C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2162596";strain_name="129T1/Sv-Dnd1<Ter>";symbol="Srebf2<sup>lop13</sup>";symbol_text="Srebf2<lop13>"
15 92081395 NC_000081.6:g.92081395G>A G A . . ANN=A|5_prime_UTR_intron_variant|LOW|Cntn1|12805|transcript|ENSMUST00000169825.7|Coding|1/23|c.-72+30072G>A|p.(%3D)|160/290803|1/3063|1/1021||,A|non_coding_transcript_intron_variant|LOW|Cntn1|12805|transcript|ENSMUST00000141187.7|Noncoding|1/8|n.159+30072G>A||160/198287||||;allele_of_genes="MGI:105980";alleles="MGI:5050725";geneLevelConsequence="intron_variant";hgvs_nomenclature="NC_000081.6:g.92081395G>A";impact="MODIFIER";soTerm="point_mutation";strain_id="MGI:2159737";strain_name="BALB/cJ";symbol="Cntn1<sup>m1J</sup>";symbol_text="Cntn1<m1J>"
15 92250964 NC_000081.6:g.92250964G>A G A . . ANN=A|stop_gained|HIGH|Cntn1|12805|transcript|ENSMUST00000000109.10|Coding|10/24|c.1091G>A|p.(W364*)|1310/213766|1091/3063|364/1021||,A|stop_gained|HIGH|Cntn1|12805|transcript|ENSMUST00000068378.5|Coding|10/24|c.1091G>A|p.(W364*)|1467/178758|1091/3063|364/1021||,A|stop_gained|HIGH|Cntn1|12805|transcript|ENSMUST00000169825.7|Coding|10/24|c.1091G>A|p.(W364*)|1321/290803|1091/3063|364/1021||;allele_of_genes="MGI:105980";alleles="MGI:5523802";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.92250964G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159968";strain_name="MRL/MpJ-Fas<lpr>/J";symbol="Cntn1<sup>usl</sup>";symbol_text="Cntn1<usl>"
15 93508659 NC_000081.6:g.93508659C>A C A . . ANN=A|missense_variant|MODERATE|Prickle1|106042|transcript|ENSMUST00000048982.10|Coding|5/8|c.482G>T|p.(C161F)|735/96778|482/2499|161/833||,A|missense_variant|MODERATE|Prickle1|106042|transcript|ENSMUST00000109255.2|Coding|5/8|c.482G>T|p.(C161F)|794/20410|482/2499|161/833||;allele_of_genes="MGI:1916034";alleles="MGI:5297388";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.93508659C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prickle1<sup>b2b019Clo</sup>";symbol_text="Prickle1<b2b019Clo>"
15 94324685 NC_000081.6:g.94324685T>G T G . . ANN=G|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|27/39|c.4070A>C|p.(H1357P)|4239/134096|4070/5721|1357/1907||,G|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|27/28|c.4070A>C|p.(H1357P)|4239/83925|4070/4278|1357/1426||;allele_of_genes="MGI:2660628";alleles="MGI:2673336";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.94324685T>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5652337";strain_name="B6.I-4";symbol="Adamts20<sup>bt-Mri1</sup>";symbol_text="Adamts20<bt-Mri1>"
15 94326182 NC_000081.6:g.94326182C>T C T . . ANN=T|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|26/39|c.3664G>A|p.(G1222R)|3833/134096|3664/5721|1222/1907||,T|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|26/28|c.3664G>A|p.(G1222R)|3833/83925|3664/4278|1222/1426||;allele_of_genes="MGI:2660628";alleles="MGI:3847117";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.94326182C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3612124";strain_name="C57BL/6Apb";symbol="Adamts20<sup>hip</sup>";symbol_text="Adamts20<hip>"
15 94331377 NC_000081.6:g.94331377G>A G A . . ANN=A|stop_gained|HIGH|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|20/39|c.2860C>T|p.(R954*)|3029/134096|2860/5721|954/1907||,A|stop_gained|HIGH|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|20/28|c.2860C>T|p.(R954*)|3029/83925|2860/4278|954/1426||;allele_of_genes="MGI:2660628";alleles="MGI:2673334";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.94331377G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2673366";strain_name="C57BL/6J-ple";symbol="Adamts20<sup>bt-Bei1</sup>";symbol_text="Adamts20<bt-Bei1>"
15 94338861 NC_000081.6:g.94338861A>T A T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|16/38|c.2285-8T>A|p.?|2454/134096|2285/5721|762/1907||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|16/27|c.2285-8T>A|p.?|2454/83925|2285/4278|762/1426||;allele_of_genes="MGI:2660628";alleles="MGI:3774131";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000081.6:g.94338861A>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts20<sup>sp2</sup>";symbol_text="Adamts20<sp2>"
15 94341055 NC_000081.6:g.94341055G>A G A . . ANN=A|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|16/39|c.2281C>T|p.(L761F)|2450/134096|2281/5721|761/1907||,A|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|16/28|c.2281C>T|p.(L761F)|2450/83925|2281/4278|761/1426||;allele_of_genes="MGI:2660628";alleles="MGI:3766915";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.94341055G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Adamts20<sup>bt-2H</sup>";symbol_text="Adamts20<bt-2H>"
15 94345754 NC_000081.6:g.94345754G>A G A . . ANN=A|stop_gained|HIGH|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|14/39|c.1993C>T|p.(Q665*)|2162/134096|1993/5721|665/1907||,A|stop_gained|HIGH|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|14/28|c.1993C>T|p.(Q665*)|2162/83925|1993/4278|665/1426||;allele_of_genes="MGI:2660628";alleles="MGI:5617471";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.94345754G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adamts20<sup>bt-10J</sup>";symbol_text="Adamts20<bt-10J>"
15 94349108 NC_000081.6:g.94349108G>A G A . . ANN=A|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000035342.10|Coding|11/39|c.1598C>T|p.(P533L)|1767/134096|1598/5721|533/1907||,A|missense_variant|MODERATE|Adamts20|223838|transcript|ENSMUST00000155907.1|Coding|11/28|c.1598C>T|p.(P533L)|1767/83925|1598/4278|533/1426||;allele_of_genes="MGI:2660628";alleles="MGI:1856473";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.94349108G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2684695";strain_name="DBA/2J";symbol="Adamts20<sup>bt</sup>";symbol_text="Adamts20<bt>"
15 94561484 NC_000081.6:g.94561484T>C T C . . ANN=C|missense_variant|MODERATE|Irak4|266632|transcript|ENSMUST00000074936.9|Coding|9/12|c.980T>C|p.(I327T)|1171/24664|980/1380|327/460||,C|missense_variant|MODERATE|Irak4|266632|transcript|ENSMUST00000109248.1|Coding|9/12|c.980T>C|p.(I327T)|1142/38144|980/1362|327/454||;allele_of_genes="MGI:2182474";alleles="MGI:3774129";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.94561484T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Irak4<sup>m1Btlr</sup>";symbol_text="Irak4<m1Btlr>"
15 98904791 NC_000081.6:g.98904791G>T G T . . ANN=T|missense_variant|MODERATE|Lmbr1l|74775|transcript|ENSMUST00000023736.9|Coding|16/17|c.1276C>A|p.(R426S)|1586/14315|1276/1470|426/490||,T|non_coding_transcript_exon_variant|LOW|Lmbr1l|74775|transcript|ENSMUST00000109127.7|Noncoding|16/17|n.1834C>A||1834/12292||||,T|non_coding_transcript_exon_variant|LOW|Lmbr1l|74775|transcript|ENSMUST00000231087.1|Noncoding|3/4|n.364C>A||364/2068||||;allele_of_genes="MGI:1289247";alleles="MGI:6305080";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.98904791G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lmbr1l<sup>m2Btlr</sup>";symbol_text="Lmbr1l<m2Btlr>"
15 98909263 NC_000081.6:g.98909263G>T G T . . ANN=T|stop_gained|HIGH|Lmbr1l|74775|transcript|ENSMUST00000023736.9|Coding|8/17|c.636C>A|p.(C212*)|946/14315|636/1470|212/490||,T|non_coding_transcript_exon_variant|LOW|Lmbr1l|74775|transcript|ENSMUST00000109127.7|Noncoding|8/17|n.1194C>A||1194/12292||||,T|non_coding_transcript_exon_variant|LOW|Lmbr1l|74775|transcript|ENSMUST00000127548.1|Noncoding|1/4|n.1C>A||1/2082||||,T|non_coding_transcript_exon_variant|LOW|Lmbr1l|74775|transcript|ENSMUST00000135051.2|Noncoding|2/6|n.78C>A||78/1868||||;allele_of_genes="MGI:1289247";alleles="MGI:6303733";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.98909263G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lmbr1l<sup>m1Btlr</sup>";symbol_text="Lmbr1l<m1Btlr>"
15 99583836 NC_000081.6:g.99583836T>G T G . . ANN=G|missense_variant|MODERATE|Aqp2|11827|transcript|ENSMUST00000023752.5|Coding|4/4|c.610T>G|p.(F204V)|708/5493|610/816|204/272||;allele_of_genes="MGI:1096865,MGI:1096865";alleles="MGI:3616876,MGI:3616876";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000081.6:g.99583836T>G";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Aqp2<sup>F204V</sup>";symbol_text="Aqp2<F204V>"
15 99583993 NC_000081.6:g.99583993C>T C T . . ANN=T|missense_variant|MODERATE|Aqp2|11827|transcript|ENSMUST00000023752.5|Coding|4/4|c.767C>T|p.(S256L)|865/5493|767/816|256/272||;allele_of_genes="MGI:1096865,MGI:1096865";alleles="MGI:1856830,MGI:1856830";geneLevelConsequence="missense_variant,intron_variant,non_coding_transcript_variant";hgvs_nomenclature="NC_000081.6:g.99583993C>T";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Aqp2<sup>cph</sup>";symbol_text="Aqp2<cph>"
15 100936385 NC_000081.6:g.100936385T>C T C . . ANN=C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|2/27|c.61T>C|p.(S21P)|176/175247|61/5937|21/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000096198.9|Coding|2/3|c.61T>C|p.(S21P)|182/7370|61/309|21/103||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|2/27|c.61T>C|p.(S21P)|232/170659|61/5937|21/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|2/27|c.61T>C|p.(S21P)|280/175035|61/5967|21/1989||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|1/26|c.61T>C|p.(S21P)|115/109659|61/5937|21/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200959.1|Coding|1/2|c.61T>C|p.(S21P)|80/4116|61/303|21/101||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|1/25|c.61T>C|p.(S21P)|61/104364|61/5814|21/1938||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201518.3|Coding|2/15|c.61T>C|p.(S21P)|214/140420|61/2412|21/804||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|2/27|c.61T>C|p.(S21P)|239/170749|61/5937|21/1979||;allele_of_genes="MGI:103169";alleles="MGI:2671787";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.100936385T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>nur14</sup>";symbol_text="Scn8a<nur14>"
15 100974563 NC_000081.6:g.100974564_100974565del ACG A . . ANN=A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|11/27|c.1483_1484del|p.(R495Efs*10)|1598/175247|1483/5937|495/1979||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|11/27|c.1483_1484del|p.(R495Efs*10)|1654/170659|1483/5937|495/1979||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|11/27|c.1483_1484del|p.(R495Efs*10)|1702/175035|1483/5967|495/1989||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|10/26|c.1483_1484del|p.(R495Efs*10)|1537/109659|1483/5937|495/1979||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|10/25|c.1483_1484del|p.(R495Efs*10)|1483/104364|1483/5814|495/1938||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000201518.3|Coding|11/15|c.1483_1484del|p.(R495Efs*10)|1636/140420|1483/2412|495/804||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|11/27|c.1483_1484del|p.(R495Efs*10)|1661/170749|1483/5937|495/1979||,A|frameshift_truncation|HIGH|Scn8a|20273|transcript|ENSMUST00000202702.1|Coding|8/10|c.1033_1034del|p.(R345Efs*10)|1033/44996|1033/1618|345/539||,A|non_coding_transcript_exon_variant|LOW|Scn8a|20273|transcript|ENSMUST00000202971.1|Noncoding|4/4|n.637_638del||637/4646||||;allele_of_genes="MGI:103169";alleles="MGI:2429654";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000081.6:g.100974564_100974565del";impact="HIGH";soTerm="deletion";strain_id="MGI:5649825";strain_name="(C57BL/6_x_C3H)F1";symbol="Scn8a<sup>dmu</sup>";symbol_text="Scn8a<dmu>"
15 101013440 NC_000081.6:g.101013440C>A C A . . ANN=A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|16/27|c.2740C>A|p.(R914S)|2855/175247|2740/5937|914/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|16/27|c.2740C>A|p.(R914S)|2911/170659|2740/5937|914/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|16/27|c.2770C>A|p.(R924S)|2989/175035|2770/5967|924/1989||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|15/26|c.2740C>A|p.(R914S)|2794/109659|2740/5937|914/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|15/25|c.2740C>A|p.(R914S)|2740/104364|2740/5814|914/1938||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|16/27|c.2740C>A|p.(R914S)|2918/170749|2740/5937|914/1979||;allele_of_genes="MGI:103169";alleles="MGI:5506774";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101013440C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2163709";strain_name="FVB/NJ";symbol="Scn8a<sup>m10J</sup>";symbol_text="Scn8a<m10J>"
15 101013479 NC_000081.6:g.101013479G>T G T . . ANN=T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|16/27|c.2779G>T|p.(V927F)|2894/175247|2779/5937|927/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|16/27|c.2779G>T|p.(V927F)|2950/170659|2779/5937|927/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|16/27|c.2809G>T|p.(V937F)|3028/175035|2809/5967|937/1989||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|15/26|c.2779G>T|p.(V927F)|2833/109659|2779/5937|927/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|15/25|c.2779G>T|p.(V927F)|2779/104364|2779/5814|927/1938||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|16/27|c.2779G>T|p.(V927F)|2957/170749|2779/5937|927/1979||;allele_of_genes="MGI:103169";alleles="MGI:3806790";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101013479G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>8J</sup>";symbol_text="Scn8a<8J>"
15 101013504 NC_000081.6:g.101013504G>T G T . . ANN=T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|16/27|c.2804G>T|p.(W935L)|2919/175247|2804/5937|935/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|16/27|c.2804G>T|p.(W935L)|2975/170659|2804/5937|935/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|16/27|c.2834G>T|p.(W945L)|3053/175035|2834/5967|945/1989||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|15/26|c.2804G>T|p.(W935L)|2858/109659|2804/5937|935/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|15/25|c.2804G>T|p.(W935L)|2804/104364|2804/5814|935/1938||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|16/27|c.2804G>T|p.(W935L)|2982/170749|2804/5937|935/1979||;allele_of_genes="MGI:103169";alleles="MGI:3809770";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101013504G>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>M1Btlr</sup>";symbol_text="Scn8a<M1Btlr>"
15 101015670 NC_000081.6:g.101015670A>T A T . . ANN=T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|17/27|c.2942A>T|p.(D981V)|3057/175247|2942/5937|981/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|17/27|c.2942A>T|p.(D981V)|3113/170659|2942/5937|981/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|17/27|c.2972A>T|p.(D991V)|3191/175035|2972/5967|991/1989||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|16/26|c.2942A>T|p.(D981V)|2996/109659|2942/5937|981/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|16/25|c.2942A>T|p.(D981V)|2942/104364|2942/5814|981/1938||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|17/27|c.2942A>T|p.(D981V)|3120/170749|2942/5937|981/1979||;allele_of_genes="MGI:103169";alleles="MGI:3827095";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101015670A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159843";strain_name="BALB/cAnN";symbol="Scn8a<sup>Clth</sup>";symbol_text="Scn8a<Clth>"
15 101029590 NC_000081.6:g.101029590G>A G A . . ANN=A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|22/27|c.3949G>A|p.(A1317T)|4064/175247|3949/5937|1317/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|22/27|c.3949G>A|p.(A1317T)|4120/170659|3949/5937|1317/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|22/27|c.3979G>A|p.(A1327T)|4198/175035|3979/5967|1327/1989||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|21/26|c.3949G>A|p.(A1317T)|4003/109659|3949/5937|1317/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|20/25|c.3826G>A|p.(A1276T)|3826/104364|3826/5814|1276/1938||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|22/27|c.3949G>A|p.(A1317T)|4127/170749|3949/5937|1317/1979||,A|non_coding_transcript_exon_variant|LOW|Scn8a|20273|transcript|ENSMUST00000201246.1|Noncoding|6/6|n.686G>A||686/13871||||;allele_of_genes="MGI:103169";alleles="MGI:1856080";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101029590G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2162677";strain_name="DBA/2WyDi";symbol="Scn8a<sup>med-jo</sup>";symbol_text="Scn8a<med-jo>"
15 101029750 NC_000081.6:g.101029750A>C A C . . ANN=C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|22/27|c.4109A>C|p.(N1370T)|4224/175247|4109/5937|1370/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|22/27|c.4109A>C|p.(N1370T)|4280/170659|4109/5937|1370/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|22/27|c.4139A>C|p.(N1380T)|4358/175035|4139/5967|1380/1989||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|21/26|c.4109A>C|p.(N1370T)|4163/109659|4109/5937|1370/1979||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|20/25|c.3986A>C|p.(N1329T)|3986/104364|3986/5814|1329/1938||,C|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|22/27|c.4109A>C|p.(N1370T)|4287/170749|4109/5937|1370/1979||,C|non_coding_transcript_exon_variant|LOW|Scn8a|20273|transcript|ENSMUST00000201246.1|Noncoding|6/6|n.846A>C||846/13871||||;allele_of_genes="MGI:103169";alleles="MGI:2183462";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101029750A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>4J</sup>";symbol_text="Scn8a<4J>"
15 101029815 NC_000081.6:g.101029815A>T A T . . ANN=T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|22/27|c.4174A>T|p.(I1392F)|4289/175247|4174/5937|1392/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|22/27|c.4174A>T|p.(I1392F)|4345/170659|4174/5937|1392/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|22/27|c.4204A>T|p.(I1402F)|4423/175035|4204/5967|1402/1989||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|21/26|c.4174A>T|p.(I1392F)|4228/109659|4174/5937|1392/1979||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|20/25|c.4051A>T|p.(I1351F)|4051/104364|4051/5814|1351/1938||,T|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|22/27|c.4174A>T|p.(I1392F)|4352/170749|4174/5937|1392/1979||;allele_of_genes="MGI:103169";alleles="MGI:2183472";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101029815A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>5J</sup>";symbol_text="Scn8a<5J>"
15 101029852 NC_000081.6:g.101029852T>A T A . . ANN=A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|22/27|c.4211T>A|p.(L1404H)|4326/175247|4211/5937|1404/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|22/27|c.4211T>A|p.(L1404H)|4382/170659|4211/5937|1404/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|22/27|c.4241T>A|p.(L1414H)|4460/175035|4241/5967|1414/1989||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|21/26|c.4211T>A|p.(L1404H)|4265/109659|4211/5937|1404/1979||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|20/25|c.4088T>A|p.(L1363H)|4088/104364|4088/5814|1363/1938||,A|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|22/27|c.4211T>A|p.(L1404H)|4389/170749|4211/5937|1404/1979||;allele_of_genes="MGI:103169";alleles="MGI:2429911";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101029852T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>6J</sup>";symbol_text="Scn8a<6J>"
15 101035624 NC_000081.6:g.101035624A>T A T . . ANN=T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|26/27|c.4708A>T|p.(K1570*)|4823/175247|4708/5937|1570/1979||,T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|26/27|c.4708A>T|p.(K1570*)|4879/170659|4708/5937|1570/1979||,T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|26/27|c.4738A>T|p.(K1580*)|4957/175035|4738/5967|1580/1989||,T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|25/26|c.4708A>T|p.(K1570*)|4762/109659|4708/5937|1570/1979||,T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|24/25|c.4585A>T|p.(K1529*)|4585/104364|4585/5814|1529/1938||,T|stop_gained|HIGH|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|26/27|c.4708A>T|p.(K1570*)|4886/170749|4708/5937|1570/1979||;allele_of_genes="MGI:103169";alleles="MGI:5527541";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000081.6:g.101035624A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>m2Btlr</sup>";symbol_text="Scn8a<m2Btlr>"
15 101035646 NC_000081.6:g.101035646A>G A G . . ANN=G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|26/27|c.4730A>G|p.(Y1577C)|4845/175247|4730/5937|1577/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|26/27|c.4730A>G|p.(Y1577C)|4901/170659|4730/5937|1577/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|26/27|c.4760A>G|p.(Y1587C)|4979/175035|4760/5967|1587/1989||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|25/26|c.4730A>G|p.(Y1577C)|4784/109659|4730/5937|1577/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|24/25|c.4607A>G|p.(Y1536C)|4607/104364|4607/5814|1536/1938||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|26/27|c.4730A>G|p.(Y1577C)|4908/170749|4730/5937|1577/1979||;allele_of_genes="MGI:103169";alleles="MGI:5607160";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101035646A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scn8a<sup>m3Btlr</sup>";symbol_text="Scn8a<m3Btlr>"
15 101040047 NC_000081.6:g.101040047A>G A G . . ANN=G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000082209.12|Coding|27/27|c.5296A>G|p.(N1766D)|5411/175247|5296/5937|1766/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108908.5|Coding|27/27|c.5296A>G|p.(N1766D)|5467/170659|5296/5937|1766/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108909.8|Coding|27/27|c.5326A>G|p.(N1776D)|5545/175035|5326/5967|1776/1989||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000108910.9|Coding|26/26|c.5296A>G|p.(N1766D)|5350/109659|5296/5937|1766/1979||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000200963.3|Coding|25/25|c.5173A>G|p.(N1725D)|5173/104364|5173/5814|1725/1938||,G|missense_variant|MODERATE|Scn8a|20273|transcript|ENSMUST00000201549.3|Coding|27/27|c.5296A>G|p.(N1766D)|5474/170749|5296/5937|1766/1979||;allele_of_genes="MGI:103169";alleles="MGI:5578212";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000081.6:g.101040047A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5649741";strain_name="(C57BL/6J_x_SJL)F2";symbol="Scn8a<sup>em1Mm</sup>";symbol_text="Scn8a<em1Mm>"
16 3990910 NC_000082.6:g.3990910G>A G A . . ANN=A|stop_gained|HIGH|Slx4|52864|transcript|ENSMUST00000040790.13|Coding|7/15|c.1165C>T|p.(Q389*)|1475/22558|1165/4698|389/1566||,A|3_prime_UTR_exon_variant|LOW|Slx4|52864|transcript|ENSMUST00000156542.7|Coding|6/14|c.*644C>T|p.(%3D)|886/16595|243/242|81/80||;allele_of_genes="MGI:106299";alleles="MGI:5806336";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.3990910G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slx4<sup>m1Btlr</sup>";symbol_text="Slx4<m1Btlr>"
16 10513288 NC_000082.6:g.10513288G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ciita|12265|transcript|ENSMUST00000023147.7|Coding|11/18|c.2660+1G>A|p.?|2755/40140|2661/3237|887/1079||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Ciita|12265|transcript|ENSMUST00000229906.1|Noncoding|11/14|n.2855+1G>A||2856/30991||||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ciita|12265|transcript|ENSMUST00000230146.1|Coding|11/18|c.2651+1G>A|p.?|2693/36646|2652/3228|884/1076||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ciita|12265|transcript|ENSMUST00000230395.1|Coding|11/18|c.2891+1G>A|p.?|2977/46368|2892/3468|964/1156||,A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ciita|12265|transcript|ENSMUST00000230450.1|Coding|12/19|c.2588+1G>A|p.?|3100/46263|2589/3165|863/1055||,A|3_prime_UTR_intron_variant|LOW|Dexi|58239|transcript|ENSMUST00000184863.7|Coding|4/4|c.*501+1597C>T|p.(%3D)|1154/40524|289/288|97/96||;allele_of_genes="MGI:108445,MGI:108445";alleles="MGI:5640772,MGI:5640772";geneLevelConsequence="intron_variant,splice_donor_variant";hgvs_nomenclature="NC_000082.6:g.10513288G>A";impact="MODIFIER,HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ciita<sup>m1Btlr</sup>";symbol_text="Ciita<m1Btlr>"
16 14245552 NC_000082.6:g.14245552G>A G A . . ANN=A|missense_variant|MODERATE|Myh11|17880|transcript|ENSMUST00000090287.4|Coding|7/41|c.739C>T|p.(R247C)|852/96838|739/5919|247/1973||,A|missense_variant|MODERATE|Myh11|17880|transcript|ENSMUST00000230397.1|Coding|7/42|c.739C>T|p.(R247C)|843/96464|739/5817|247/1939||,A|missense_variant|MODERATE|Myh11|17880|transcript|ENSMUST00000231567.1|Coding|8/42|c.760C>T|p.(R254C)|866/96718|760/5940|254/1980||;allele_of_genes="MGI:102643";alleles="MGI:5582321";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.14245552G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3050593";strain_name="129S/SvEv";symbol="Myh11<sup>tm1.1Dmmz</sup>";symbol_text="Myh11<tm1.1Dmmz>"
16 15629382 NC_000082.6:g.15629382C>G C G . . ANN=G|missense_variant|MODERATE|Mcm4|17217|transcript|ENSMUST00000023353.3|Coding|11/16|c.1717G>C|p.(D573H)|1937/13504|1717/2589|573/863||,G|coding_transcript_intron_variant|LOW|Mcm4|17217|transcript|ENSMUST00000229606.1|Coding|3/3|c.247-5096G>C|p.(%3D)|247/11197|247/260|83/86||;allele_of_genes="MGI:103199";alleles="MGI:5473704";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.15629382C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Mcm4<sup>Sdla</sup>";symbol_text="Mcm4<Sdla>"
16 15632134 NC_000082.6:g.15632134A>T A T . . ANN=T|missense_variant|MODERATE|Mcm4|17217|transcript|ENSMUST00000023353.3|Coding|8/16|c.1033T>A|p.(F345I)|1253/13504|1033/2589|345/863||,T|missense_variant|MODERATE|Mcm4|17217|transcript|ENSMUST00000230437.1|Coding|5/6|c.614T>A|p.(L205H)|614/4466|614/658|205/219||,T|coding_transcript_intron_variant|LOW|Mcm4|17217|transcript|ENSMUST00000229606.1|Coding|3/3|c.246+2371T>A|p.(%3D)|247/11197|247/260|83/86||;allele_of_genes="MGI:103199";alleles="MGI:3696791";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.15632134A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mcm4<sup>chaos3</sup>";symbol_text="Mcm4<chaos3>"
16 15672267 NC_000082.6:g.15672267T>A T A . . ANN=A|stop_gained|HIGH|Prkdc|19090|transcript|ENSMUST00000023352.8|Coding|16/86|c.1634T>A|p.(L545*)|1634/204347|1634/12387|545/4129||,A|non_coding_transcript_exon_variant|LOW|Prkdc|19090|transcript|ENSMUST00000182134.1|Noncoding|16/22|n.1657T>A||1657/46884||||;allele_of_genes="MGI:104779";alleles="MGI:4820716";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.15672267T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Prkdc<sup>hanky</sup>";symbol_text="Prkdc<hanky>"
16 15725461 NC_000082.6:g.15725461G>T G T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Prkdc|19090|transcript|ENSMUST00000023352.8|Coding|40/85|c.5354+1G>T|p.?|5355/204347|5355/12387|1785/4129||;allele_of_genes="MGI:104779";alleles="MGI:6304295";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000082.6:g.15725461G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prkdc<sup>m18Btlr</sup>";symbol_text="Prkdc<m18Btlr>"
16 15786050 NC_000082.6:g.15786050T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Prkdc|19090|transcript|ENSMUST00000023352.8|Coding|64/85|c.8925+2T>C|p.?|8926/204347|8926/12387|2976/4129||;allele_of_genes="MGI:104779";alleles="MGI:6304458";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000082.6:g.15786050T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prkdc<sup>m19Btlr</sup>";symbol_text="Prkdc<m19Btlr>"
16 15839180 NC_000082.6:g.15839180T>A T A . . ANN=A|stop_gained|HIGH|Prkdc|19090|transcript|ENSMUST00000023352.8|Coding|85/86|c.12138T>A|p.(Y4046*)|12138/204347|12138/12387|4046/4129||;allele_of_genes="MGI:104779";alleles="MGI:1857113";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.15839180T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5658247";strain_name="C.B-17";symbol="Prkdc<sup>scid</sup>";symbol_text="Prkdc<scid>"
16 19956964 NC_000082.6:g.19956966_19956967del CTG C . . ANN=C|frameshift_truncation|HIGH|Klhl6|239743|transcript|ENSMUST00000058839.9|Coding|3/7|c.841_842del|p.(Q281Vfs*3)|875/36542|841/1860|281/620||,C|non_coding_transcript_exon_variant|LOW|Klhl6|239743|transcript|ENSMUST00000171910.1|Noncoding|2/2|n.774_775del||774/9370||||;allele_of_genes="MGI:2686922";alleles="MGI:6305808";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000082.6:g.19956966_19956967del";impact="HIGH";soTerm="deletion";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Klhl6<sup>M8Btlr</sup>";symbol_text="Klhl6<M8Btlr>"
16 20527333 NC_000082.6:g.20527333T>A T A . . ANN=A|missense_variant|MODERATE|Dvl3|13544|transcript|ENSMUST00000003318.12|Coding|13/15|c.1412T>A|p.(L471Q)|1625/14690|1412/2151|471/717||,A|missense_variant|MODERATE|Dvl3|13544|transcript|ENSMUST00000171572.8|Coding|13/16|c.1412T>A|p.(L471Q)|1543/16947|1412/2157|471/719||,A|missense_variant|MODERATE|Dvl3|13544|transcript|ENSMUST00000171774.1|Coding|13/15|c.1361T>A|p.(L454Q)|1450/14541|1361/2100|454/700||;allele_of_genes="MGI:108100,MGI:108100";alleles="MGI:5618437,MGI:5618437";geneLevelConsequence="missense_variant,missense_variant";hgvs_nomenclature="NC_000082.6:g.20527333T>A";impact="MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dvl3<sup>b2b2866Clo</sup>";symbol_text="Dvl3<b2b2866Clo>"
16 20709656 NC_000082.6:g.20709656C>A C A . . ANN=A|missense_variant|MODERATE|Clcn2|12724|transcript|ENSMUST00000007207.14|Coding|14/24|c.1445G>T|p.(G482V)|1567/13154|1445/2727|482/909||,A|missense_variant|MODERATE|Clcn2|12724|transcript|ENSMUST00000131522.7|Coding|15/24|c.1489G>T|p.(A497S)|2765/12209|1489/1602|497/534||,A|missense_variant|MODERATE|Clcn2|12724|transcript|ENSMUST00000232309.1|Coding|13/23|c.1313G>T|p.(G438V)|1430/12888|1313/2595|438/865||,A|coding_transcript_intron_variant|LOW|Clcn2|12724|transcript|ENSMUST00000120099.7|Coding|13/23|c.1421-27G>T|p.(%3D)|1537/12889|1421/2676|474/892||,A|3_prime_UTR_exon_variant|LOW|Clcn2|12724|transcript|ENSMUST00000231381.1|Coding|8/8|c.*216G>T|p.(%3D)|682/2784|467/466|156/155||,A|non_coding_transcript_exon_variant|LOW|Clcn2|12724|transcript|ENSMUST00000148131.7|Noncoding|10/20|n.2195G>T||2195/13127||||,A|non_coding_transcript_exon_variant|LOW|Clcn2|12724|transcript|ENSMUST00000153075.7|Noncoding|14/22|n.1614G>T||1614/13167||||;allele_of_genes="MGI:105061";alleles="MGI:5912306";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.20709656C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5656497";strain_name="BALB/cByJ_or_C57BL/6J";symbol="Clcn2<sup>nmf289</sup>";symbol_text="Clcn2<nmf289>"
16 21220853 NC_000082.6:g.21220853A>G A G . . ANN=G|missense_variant|MODERATE|Ephb3|13845|transcript|ENSMUST00000006112.6|Coding|11/16|c.2116A>G|p.(T706A)|2531/18550|2116/2982|706/994||,G|missense_variant|MODERATE|Ephb3|13845|transcript|ENSMUST00000161063.8|Coding|12/17|c.1354A>G|p.(T452A)|3431/11873|1354/2220|452/740||,G|non_coding_transcript_exon_variant|LOW|Ephb3|13845|transcript|ENSMUST00000159575.1|Noncoding|7/12|n.1767A>G||1767/6489||||;allele_of_genes="MGI:104770";alleles="MGI:5505688";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.21220853A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Ephb3<sup>tm1.1Meg</sup>";symbol_text="Ephb3<tm1.1Meg>"
16 22386834 NC_000082.6:g.22386834T>A T A . . ANN=A|stop_gained|HIGH|Etv5|104156|transcript|ENSMUST00000079601.12|Coding|12/13|c.1234A>T|p.(K412*)|1515/58411|1234/1533|412/511||,A|stop_gained|HIGH|Etv5|104156|transcript|ENSMUST00000168774.7|Coding|12/13|c.1288A>T|p.(K430*)|1320/55199|1288/1587|430/529||,A|missense_variant|MODERATE|Etv5|104156|transcript|ENSMUST00000170803.1|Coding|3/4|c.243A>T|p.(R81S)|243/18251|243/268|81/89||;allele_of_genes="MGI:1096867";alleles="MGI:5563470";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.22386834T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Etv5<sup>sco</sup>";symbol_text="Etv5<sco>"
16 58677944 NC_000082.6:g.58677944G>T G T . . ANN=T|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Cpox|12892|transcript|ENSMUST00000060077.6|Coding|5/6|c.1140-1G>T|p.?|1276/10095|1140/1332|380/444||,T|splice_acceptor_variant&non_coding_transcript_intron_variant|HIGH|Cpox|12892|transcript|ENSMUST00000231276.1|Noncoding|1/1|n.1326-1G>T||1326/3846||||,T|splice_region_variant&non_coding_transcript_exon_variant|LOW|Cpox|.|transcript|ENSMUST00000232532.1|Noncoding|1/2|n.106G>T||106/39798||||,T|non_coding_transcript_exon_variant|LOW|Cpox|12892|transcript|ENSMUST00000231492.1|Noncoding|1/2|n.89G>T||89/1090||||;allele_of_genes="MGI:104841";alleles="MGI:1856966";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000082.6:g.58677944G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Cpox<sup>nct</sup>";symbol_text="Cpox<nct>"
16 70528901 NC_000082.6:g.70528901G>T G T . . ANN=T|stop_gained|HIGH|Gbe1|74185|transcript|ENSMUST00000023393.14|Coding|14/17|c.1825G>T|p.(E609*)|1891/255630|1825/2109|609/703||,T|stop_gained|HIGH|Gbe1|74185|transcript|ENSMUST00000163832.7|Coding|14/16|c.1825G>T|p.(E609*)|2029/255768|1825/2109|609/703||,T|stop_gained|HIGH|Gbe1|74185|transcript|ENSMUST00000170464.2|Coding|14/18|c.1825G>T|p.(E609*)|1844/255581|1825/2109|609/703||,T|stop_gained|HIGH|Gbe1|74185|transcript|ENSMUST00000171132.7|Coding|14/14|c.1825G>T|p.(E609*)|1914/216227|1825/1983|609/661||,T|non_coding_transcript_exon_variant|LOW|Gbe1|74185|transcript|ENSMUST00000164300.1|Noncoding|14/14|n.1914G>T||1914/216658||||;allele_of_genes="MGI:1921435";alleles="MGI:4868492";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.70528901G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Gbe1<sup>m1Yty</sup>";symbol_text="Gbe1<m1Yty>"
16 72935667 NC_000082.6:g.72935667T>C T C . . ANN=C|missense_variant|MODERATE|Robo1|19876|transcript|ENSMUST00000023600.7|Coding|6/29|c.809T>C|p.(I270T)|1800/382947|809/4839|270/1613||,C|missense_variant|MODERATE|Robo1|19876|transcript|ENSMUST00000232205.1|Coding|6/29|c.838T>C|p.(S280P)|838/482396|838/4868|280/1622||,C|non_coding_transcript_exon_variant|LOW|Robo1|19876|transcript|ENSMUST00000231265.1|Noncoding|6/7|n.1745T>C||1745/295041||||;allele_of_genes="MGI:1274781";alleles="MGI:5496051";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.72935667T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Robo1<sup>b2b872Clo</sup>";symbol_text="Robo1<b2b872Clo>"
16 91499537 NC_000082.6:g.91499537C>T C T . . ANN=T|stop_gained|HIGH|Ifnar1|15975|transcript|ENSMUST00000023689.10|Coding|7/11|c.925C>T|p.(Q309*)|1031/22204|925/1773|309/591||,T|stop_gained|HIGH|Ifnar1|15975|transcript|ENSMUST00000117748.7|Coding|7/12|c.925C>T|p.(Q309*)|1005/22178|925/1773|309/591||,T|3_prime_UTR_exon_variant|LOW|Ifnar1|15975|transcript|ENSMUST00000123196.8|Coding|8/13|c.*134C>T|p.(%3D)|1081/22189|853/852|285/284||;allele_of_genes="MGI:107658";alleles="MGI:5498008";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000082.6:g.91499537C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ifnar1<sup>m2Btlr</sup>";symbol_text="Ifnar1<m2Btlr>"
16 91499885 NC_000082.6:g.91499885A>C A C . . ANN=C|missense_variant|MODERATE|Ifnar1|15975|transcript|ENSMUST00000023689.10|Coding|8/11|c.1021A>C|p.(T341P)|1127/22204|1021/1773|341/591||,C|missense_variant|MODERATE|Ifnar1|15975|transcript|ENSMUST00000117748.7|Coding|8/12|c.1021A>C|p.(T341P)|1101/22178|1021/1773|341/591||,C|3_prime_UTR_exon_variant|LOW|Ifnar1|15975|transcript|ENSMUST00000123196.8|Coding|9/13|c.*230A>C|p.(%3D)|1177/22189|853/852|285/284||;allele_of_genes="MGI:107658";alleles="MGI:3822164";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000082.6:g.91499885A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ifnar1<sup>m1Btlr</sup>";symbol_text="Ifnar1<m1Btlr>"
17 15370215 NC_000083.6:g.15370215C>T C T . . ANN=T|missense_variant|MODERATE|Dll1|13388|transcript|ENSMUST00000014917.7|Coding|8/11|c.1238G>A|p.(C413Y)|1974/8623|1238/2169|413/723||;allele_of_genes="MGI:104659";alleles="MGI:4821259";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.15370215C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Dll1<sup>m1Mhda</sup>";symbol_text="Dll1<m1Mhda>"
17 15374937 NC_000083.6:g.15374937T>C T C . . ANN=C|missense_variant|MODERATE|Dll1|13388|transcript|ENSMUST00000014917.7|Coding|2/11|c.77A>G|p.(E26G)|813/8623|77/2169|26/723||,C|missense_variant|MODERATE|Dll1|13388|transcript|ENSMUST00000143460.1|Coding|3/3|c.77A>G|p.(E26G)|573/2079|77/220|26/73||,C|non_coding_transcript_exon_variant|LOW|Dll1|13388|transcript|ENSMUST00000124196.1|Noncoding|1/4|n.164A>G||164/3477||||;allele_of_genes="MGI:104659";alleles="MGI:4849919";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.15374937T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Dll1<sup>m594592Hubr</sup>";symbol_text="Dll1<m594592Hubr>"
17 24184393 NC_000083.6:g.24184394_24184396del GAGA G . . ANN=G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Tbc1d24|224617|transcript|ENSMUST00000097376.9|Coding|4/10|c.968_970del|p.(V323_S324delinsA)|1286/30131|968/1686|323/562||,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Tbc1d24|224617|transcript|ENSMUST00000167791.8|Coding|4/9|c.968_970del|p.(V323_S324delinsA)|1152/26787|968/1686|323/562||,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Tbc1d24|224617|transcript|ENSMUST00000201301.3|Coding|3/8|c.968_970del|p.(V323_S324delinsA)|1137/26689|968/1686|323/562||,G|disruptive_inframe_deletion&splice_region_variant|MODERATE|Tbc1d24|224617|transcript|ENSMUST00000201805.3|Coding|4/10|c.968_970del|p.(V323_S324delinsA)|1169/26758|968/1686|323/562||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000040474.10|Coding|3/7|c.966-544_966-542del|p.(%3D)|1237/28605|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000168378.7|Coding|3/7|c.966-544_966-542del|p.(%3D)|1262/21103|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000168410.8|Coding|3/7|c.966-544_966-542del|p.(%3D)|1171/30105|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000171189.7|Coding|4/8|c.966-544_966-542del|p.(%3D)|1434/21173|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000201089.3|Coding|3/8|c.966-544_966-542del|p.(%3D)|1241/26965|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000201359.3|Coding|3/7|c.966-548_966-546del|p.(%3D)|1161/26524|966/978|322/326||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000201960.3|Coding|3/7|c.966-544_966-542del|p.(%3D)|1216/26661|966/1668|322/556||,G|coding_transcript_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000202925.3|Coding|2/6|c.966-544_966-542del|p.(%3D)|1108/26662|966/1668|322/556||,G|5_prime_UTR_intron_variant|LOW|Tbc1d24|224617|transcript|ENSMUST00000201583.1|Coding|2/5|c.-64-544_-64-542del|p.(%3D)|120/23953|1/549|1/183||;allele_of_genes="MGI:2443456";alleles="MGI:6195494";geneLevelConsequence="inframe_deletion,splice_region_variant";hgvs_nomenclature="NC_000083.6:g.24184394_24184396del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tbc1d24<sup>em2Tbf</sup>";symbol_text="Tbc1d24<em2Tbf>"
17 24591935 NC_000083.6:g.24591935T>A T A . . ANN=A|missense_variant|MODERATE|Pkd1|18763|transcript|ENSMUST00000035565.4|Coding|38/46|c.11084T>A|p.(I3695N)|11397/46559|11084/12882|3695/4294||,A|missense_variant|MODERATE|Pkd1|18763|transcript|ENSMUST00000227058.1|Coding|2/5|c.386T>A|p.(I129N)|386/2310|386/711|129/237||,A|coding_transcript_intron_variant|LOW|Pkd1|18763|transcript|ENSMUST00000228581.1|Coding|1/2|c.78+454T>A|p.(%3D)|79/1845|79/84|27/28||,A|3_prime_UTR_exon_variant|LOW|Pkd1|18763|transcript|ENSMUST00000227107.1|Coding|23/31|c.*220T>A|p.(%3D)|3915/19964|3696/3695|1232/1231||;allele_of_genes="MGI:97603";alleles="MGI:5438059";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.24591935T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pkd1<sup>b2b1585Clo</sup>";symbol_text="Pkd1<b2b1585Clo>"
17 25034014 NC_000083.6:g.25034014A>G A G . . ANN=G|missense_variant|MODERATE|Ift140|106633|transcript|ENSMUST00000024983.11|Coding|9/30|c.1138A>G|p.(N380D)|1683/83097|1138/4395|380/1465||,G|missense_variant|MODERATE|Ift140|106633|transcript|ENSMUST00000137386.7|Coding|9/27|c.1138A>G|p.(N380D)|1215/76711|1138/3697|380/1232||,G|missense_variant|MODERATE|Ift140|106633|transcript|ENSMUST00000142000.8|Coding|9/29|c.1138A>G|p.(N380D)|1989/80603|1138/4266|380/1422||,G|non_coding_transcript_exon_variant|LOW|Ift140|106633|transcript|ENSMUST00000156945.1|Noncoding|4/7|n.399A>G||399/11129||||,G|non_coding_transcript_exon_variant|LOW|Ift140|106633|transcript|ENSMUST00000232788.1|Noncoding|3/3|n.578A>G||578/2448||||;allele_of_genes="MGI:2146906";alleles="MGI:5560263";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.25034014A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ift140<sup>b2b1283Clo</sup>";symbol_text="Ift140<b2b1283Clo>"
17 34264946 NC_000083.6:g.34264946A>T A T . . ANN=T|missense_variant|MODERATE|H2-Ab1|14961|transcript|ENSMUST00000040828.5|Coding|2/6|c.280A>T|p.(I94F)|383/6210|280/798|94/266||;allele_of_genes="MGI:103070";alleles="MGI:3586447";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.34264946A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5649658";strain_name="(C57BL/6_x_BALB/c)F1";symbol="H2-Ab1<sup>bm12</sup>";symbol_text="H2-Ab1<bm12>"
17 34264956 NC_000083.6:g.34264956G>A G A . . ANN=A|missense_variant|MODERATE|H2-Ab1|14961|transcript|ENSMUST00000040828.5|Coding|2/6|c.290G>A|p.(R97Q)|393/6210|290/798|97/266||;allele_of_genes="MGI:103070";alleles="MGI:3586447";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.34264956G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5649658";strain_name="(C57BL/6_x_BALB/c)F1";symbol="H2-Ab1<sup>bm12</sup>";symbol_text="H2-Ab1<bm12>"
17 35200879 NC_000083.6:g.35200879T>C T C . . ANN=C|missense_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000025263.14|Coding|3/4|c.268A>G|p.(K90E)|435/2627|268/708|90/236||,C|coding_transcript_intron_variant|LOW|Tnf|21926|transcript|ENSMUST00000167924.1|Coding|2/2|c.241+205A>G|p.(%3D)|406/2498|242/660|81/220||;allele_of_genes="MGI:104798";alleles="MGI:3578747";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.35200879T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5296329";strain_name="B6.Cg-Thy1<a>";symbol="Tnf<sup>tm2Jods</sup>";symbol_text="Tnf<tm2Jods>"
17 35200881 NC_000083.6:g.35200882_35200905del TCACTCGAATTTTGAGAAGATGATC T . . ANN=T|disruptive_inframe_deletion&splice_region_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000025263.14|Coding|3/4|c.242_265del|p.(R81_D89delinsN)|409/2627|242/708|81/236||,T|coding_transcript_intron_variant|LOW|Tnf|21926|transcript|ENSMUST00000167924.1|Coding|2/2|c.241+179_241+202del|p.(%3D)|406/2498|242/660|81/220||;allele_of_genes="MGI:104798";alleles="MGI:3578747";geneLevelConsequence="inframe_deletion,splice_region_variant";hgvs_nomenclature="NC_000083.6:g.35200882_35200905del";impact="MODERATE";soTerm="deletion";strain_id="MGI:5296329";strain_name="B6.Cg-Thy1<a>";symbol="Tnf<sup>tm2Jods</sup>";symbol_text="Tnf<tm2Jods>"
17 35201082 NC_000083.6:g.35201083_35201087del ACTGAG A . . ANN=A|frameshift_truncation&splice_donor_variant|HIGH|Tnf|21926|transcript|ENSMUST00000025263.14|Coding||c.238_241+1del|p.(L80Dfs*12)|405/2627|238/708|80/236||,A|frameshift_truncation&splice_donor_variant|HIGH|Tnf|21926|transcript|ENSMUST00000167924.1|Coding||c.238_241+1del|p.(L80Qfs*12)|402/2498|238/660|80/220||;allele_of_genes="MGI:104798";alleles="MGI:3578747";geneLevelConsequence="splice_donor_variant,coding_sequence_variant";hgvs_nomenclature="NC_000083.6:g.35201083_35201087del";impact="HIGH";soTerm="deletion";strain_id="MGI:5296329";strain_name="B6.Cg-Thy1<a>";symbol="Tnf<sup>tm2Jods</sup>";symbol_text="Tnf<tm2Jods>"
17 35201674 NC_000083.6:g.35201674A>G A G . . ANN=G|missense_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000025263.14|Coding|1/4|c.167T>C|p.(I56T)|334/2627|167/708|56/236||,G|missense_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000167924.1|Coding|1/3|c.167T>C|p.(I56T)|331/2498|167/660|56/220||;allele_of_genes="MGI:104798";alleles="MGI:5582740";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.35201674A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Tnf<sup>M2Btlr</sup>";symbol_text="Tnf<M2Btlr>"
17 35201818 NC_000083.6:g.35201818C>T C T . . ANN=T|missense_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000025263.14|Coding|1/4|c.23G>A|p.(R8H)|190/2627|23/708|8/236||,T|missense_variant|MODERATE|Tnf|21926|transcript|ENSMUST00000167924.1|Coding|1/3|c.23G>A|p.(R8H)|187/2498|23/660|8/220||;allele_of_genes="MGI:104798";alleles="MGI:3689190";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.35201818C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2160294";strain_name="I/St";symbol="Tnf<sup>R8H</sup>";symbol_text="Tnf<R8H>"
17 43450983 NC_000083.6:g.43450983A>T A T . . ANN=T|missense_variant|MODERATE|Adgrf5|224792|transcript|ENSMUST00000113599.1|Coding|17/21|c.3568A>T|p.(S1190C)|3834/70092|3568/4047|1190/1349||,T|missense_variant|MODERATE|Adgrf5|224792|transcript|ENSMUST00000225962.1|Coding|11/15|c.2953A>T|p.(S985C)|2953/29760|2953/3432|985/1144||,T|missense_variant|MODERATE|Adgrf5|224792|transcript|ENSMUST00000226087.1|Coding|17/21|c.3568A>T|p.(S1190C)|3738/95622|3568/4047|1190/1349||;allele_of_genes="MGI:2182928,MGI:2182928,MGI:2182928";alleles="MGI:5690210,MGI:5690210,MGI:5690210";geneLevelConsequence="missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000083.6:g.43450983A>T";impact="MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adgrf5<sup>m1Btlr</sup>";symbol_text="Adgrf5<m1Btlr>"
17 46024071 NC_000083.6:g.46024071_46024078delinsTGCCGTGC GGCTTTGT TGCCGTGC . . ANN=TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|5/6|c.406_413delACAAAGCCinsGCACGGCA|p.(T136_P138delinsARQ)|865/14823|406/441|136/147||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|5/7|c.940_947delACAAAGCCinsGCACGGCA|p.(T314_P316delinsARQ)|1419/15377|940/1107|314/369||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|5/7|c.406_413delACAAAGCCinsGCACGGCA|p.(T136_P138delinsARQ)|406/12499|406/513|136/171||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|5/8|c.406_413delACAAAGCCinsGCACGGCA|p.(T136_P138delinsARQ)|406/12526|406/627|136/209||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|5/8|c.940_947delACAAAGCCinsGCACGGCA|p.(T314_P316delinsARQ)|1419/13827|940/1179|314/393||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|5/6|c.940_947delACAAAGCCinsGCACGGCA|p.(T314_P316delinsARQ)|940/13033|940/975|314/325||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|5/7|c.940_947delACAAAGCCinsGCACGGCA|p.(T314_P316delinsARQ)|940/13033|940/1107|314/369||,TGCCGTGC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|5/8|c.940_947delACAAAGCCinsGCACGGCA|p.(T314_P316delinsARQ)|940/13033|940/1179|314/393||,TGCCGTGC|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000133605.7|Noncoding|2/4|n.455_462delACAAAGCCinsGCACGGCA||455/6276||||,TGCCGTGC|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000142321.1|Noncoding|2/5|n.376_383delACAAAGCCinsGCACGGCA||376/5970||||,TGCCGTGC|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000150327.7|Noncoding|2/3|n.438_445delACAAAGCCinsGCACGGCA||438/6386||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46024071_46024078delinsTGCCGTGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46024456 NC_000083.6:g.46024456C>T C T . . ANN=T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|4/6|c.377G>A|p.(R126K)|836/14823|377/441|126/147||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|4/7|c.911G>A|p.(R304K)|1390/15377|911/1107|304/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|4/7|c.377G>A|p.(R126K)|377/12499|377/513|126/171||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|4/8|c.377G>A|p.(R126K)|377/12526|377/627|126/209||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|4/8|c.911G>A|p.(R304K)|1390/13827|911/1179|304/393||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|4/6|c.911G>A|p.(R304K)|911/13033|911/975|304/325||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|4/7|c.911G>A|p.(R304K)|911/13033|911/1107|304/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|4/8|c.911G>A|p.(R304K)|911/13033|911/1179|304/393||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000133605.7|Noncoding|1/4|n.426G>A||426/6276||||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000142321.1|Noncoding|1/5|n.347G>A||347/5970||||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000150327.7|Noncoding|1/3|n.409G>A||409/6386||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46024456C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46024459 NC_000083.6:g.46024459C>T C T . . ANN=T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|4/6|c.374G>A|p.(S125N)|833/14823|374/441|125/147||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|4/7|c.908G>A|p.(S303N)|1387/15377|908/1107|303/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|4/7|c.374G>A|p.(S125N)|374/12499|374/513|125/171||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|4/8|c.374G>A|p.(S125N)|374/12526|374/627|125/209||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|4/8|c.908G>A|p.(S303N)|1387/13827|908/1179|303/393||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|4/6|c.908G>A|p.(S303N)|908/13033|908/975|303/325||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|4/7|c.908G>A|p.(S303N)|908/13033|908/1107|303/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|4/8|c.908G>A|p.(S303N)|908/13033|908/1179|303/393||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000133605.7|Noncoding|1/4|n.423G>A||423/6276||||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000142321.1|Noncoding|1/5|n.344G>A||344/5970||||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000150327.7|Noncoding|1/3|n.406G>A||406/6386||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46024459C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46024496 NC_000083.6:g.46024496T>C T C . . ANN=C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|4/6|c.337A>G|p.(S113G)|796/14823|337/441|113/147||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|4/7|c.871A>G|p.(S291G)|1350/15377|871/1107|291/369||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|4/7|c.337A>G|p.(S113G)|337/12499|337/513|113/171||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|4/8|c.337A>G|p.(S113G)|337/12526|337/627|113/209||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|4/8|c.871A>G|p.(S291G)|1350/13827|871/1179|291/393||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|4/6|c.871A>G|p.(S291G)|871/13033|871/975|291/325||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|4/7|c.871A>G|p.(S291G)|871/13033|871/1107|291/369||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|4/8|c.871A>G|p.(S291G)|871/13033|871/1179|291/393||,C|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000133605.7|Noncoding|1/4|n.386A>G||386/6276||||,C|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000142321.1|Noncoding|1/5|n.307A>G||307/5970||||,C|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000150327.7|Noncoding|1/3|n.369A>G||369/6386||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46024496T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46025369 NC_000083.6:g.46025369_46025370delinsTC GA TC . . ANN=TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|3/6|c.289_290delTCinsGA|p.(S97E)|748/14823|289/441|97/147||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|3/7|c.823_824delTCinsGA|p.(S275E)|1302/15377|823/1107|275/369||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|3/7|c.289_290delTCinsGA|p.(S97E)|289/12499|289/513|97/171||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|3/8|c.289_290delTCinsGA|p.(S97E)|289/12526|289/627|97/209||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|3/8|c.823_824delTCinsGA|p.(S275E)|1302/13827|823/1179|275/393||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|3/6|c.823_824delTCinsGA|p.(S275E)|823/13033|823/975|275/325||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|3/7|c.823_824delTCinsGA|p.(S275E)|823/13033|823/1107|275/369||,TC|mnv|HIGH|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|3/8|c.823_824delTCinsGA|p.(S275E)|823/13033|823/1179|275/393||,TC|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000146149.1|Noncoding|3/3|n.289_290delTCinsGA||289/6161||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46025369_46025370delinsTC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46025390 NC_000083.6:g.46025390G>A G A . . ANN=A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|3/6|c.269C>T|p.(A90V)|728/14823|269/441|90/147||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|3/7|c.803C>T|p.(A268V)|1282/15377|803/1107|268/369||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|3/7|c.269C>T|p.(A90V)|269/12499|269/513|90/171||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|3/8|c.269C>T|p.(A90V)|269/12526|269/627|90/209||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|3/8|c.803C>T|p.(A268V)|1282/13827|803/1179|268/393||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|3/6|c.803C>T|p.(A268V)|803/13033|803/975|268/325||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|3/7|c.803C>T|p.(A268V)|803/13033|803/1107|268/369||,A|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|3/8|c.803C>T|p.(A268V)|803/13033|803/1179|268/393||,A|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000146149.1|Noncoding|3/3|n.269C>T||269/6161||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46025390G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46025411 NC_000083.6:g.46025411G>C G C . . ANN=C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|3/6|c.248C>G|p.(A83G)|707/14823|248/441|83/147||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|3/7|c.782C>G|p.(A261G)|1261/15377|782/1107|261/369||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|3/7|c.248C>G|p.(A83G)|248/12499|248/513|83/171||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|3/8|c.248C>G|p.(A83G)|248/12526|248/627|83/209||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|3/8|c.782C>G|p.(A261G)|1261/13827|782/1179|261/393||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|3/6|c.782C>G|p.(A261G)|782/13033|782/975|261/325||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|3/7|c.782C>G|p.(A261G)|782/13033|782/1107|261/369||,C|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|3/8|c.782C>G|p.(A261G)|782/13033|782/1179|261/393||,C|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000146149.1|Noncoding|3/3|n.248C>G||248/6161||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46025411G>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46025504 NC_000083.6:g.46025504C>T C T . . ANN=T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000024747.13|Coding|3/6|c.155G>A|p.(R52H)|614/14823|155/441|52/147||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000071648.11|Coding|3/7|c.689G>A|p.(R230H)|1168/15377|689/1107|230/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113519.1|Coding|3/7|c.155G>A|p.(R52H)|155/12499|155/513|52/171||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000113520.7|Coding|3/8|c.155G>A|p.(R52H)|155/12526|155/627|52/209||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000142351.8|Coding|3/8|c.689G>A|p.(R230H)|1168/13827|689/1179|230/393||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000167860.8|Coding|3/6|c.689G>A|p.(R230H)|689/13033|689/975|230/325||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000214739.1|Coding|3/7|c.689G>A|p.(R230H)|689/13033|689/1107|230/369||,T|missense_variant|MODERATE|Vegfa|22339|transcript|ENSMUST00000217017.1|Coding|3/8|c.689G>A|p.(R230H)|689/13033|689/1179|230/393||,T|non_coding_transcript_exon_variant|LOW|Vegfa|22339|transcript|ENSMUST00000146149.1|Noncoding|3/3|n.155G>A||155/6161||||;allele_of_genes="MGI:103178";alleles="MGI:3761357";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46025504C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Vegfa<sup>tm3Gne</sup>";symbol_text="Vegfa<tm3Gne>"
17 46409692 NC_000083.6:g.46409692T>C T C . . ANN=C|missense_variant|MODERATE|Zfp318|57908|transcript|ENSMUST00000113481.8|Coding|8/10|c.3355T>C|p.(Y1119H)|3463/36294|3355/6714|1119/2238||,C|coding_transcript_intron_variant|LOW|Zfp318|57908|transcript|ENSMUST00000138127.7|Coding|7/7|c.3342+473T>C|p.(%3D)|3431/37170|3343/3465|1115/1155||,C|3_prime_UTR_exon_variant|LOW|Zfp318|57908|transcript|ENSMUST00000152472.7|Coding|5/7|c.*292T>C|p.(%3D)|457/10663|166/165|56/55||,C|non_coding_transcript_exon_variant|LOW|Zfp318|57908|transcript|ENSMUST00000136017.1|Noncoding|1/3|n.64T>C||64/1693||||;allele_of_genes="MGI:1889348";alleles="MGI:5619130";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46409692T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zfp318<sup>M1Btlr</sup>";symbol_text="Zfp318<M1Btlr>"
17 46576383 NC_000083.6:g.46576383A>T A T . . ANN=T|missense_variant|MODERATE|Ptk7|71461|transcript|ENSMUST00000044442.9|Coding|13/20|c.1904T>A|p.(I635N)|2086/65034|1904/3189|635/1063||,T|non_coding_transcript_intron_variant|LOW|Gm26904|.|transcript|ENSMUST00000181301.1|Noncoding|1/2|n.37-23536A>T||37/353721||||;allele_of_genes="MGI:1918711";alleles="MGI:5552948";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.46576383A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ptk7<sup>b2b2445Clo</sup>";symbol_text="Ptk7<b2b2445Clo>"
17 46911279 NC_000083.6:g.46911279T>A T A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Prph2|19133|transcript|ENSMUST00000024773.5|Coding|1/2|c.581+2T>A|p.?|820/14475|582/1041|194/347||,A|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Prph2|19133|transcript|ENSMUST00000162469.1|Noncoding|1/1|n.800+2T>A||801/9870||||;allele_of_genes="MGI:102791";alleles="MGI:3038638";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000083.6:g.46911279T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Prph2<sup>Nmf193</sup>";symbol_text="Prph2<Nmf193>"
17 46923424 NC_000083.6:g.46923425_46923426del GCT G . . ANN=G|frameshift_truncation|HIGH|Prph2|19133|transcript|ENSMUST00000024773.5|Coding|3/3|c.919_920del|p.(L308Gfs*16)|1157/14475|919/1041|307/347||;allele_of_genes="MGI:102791";alleles="MGI:2182621";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000083.6:g.46923425_46923426del";impact="HIGH";soTerm="deletion";strain_id="MGI:5651461";strain_name="(129X1/SvJ_x_129S1/Sv)F1-Kitl<+>";symbol="Prph2<sup>tm1Nmc</sup>";symbol_text="Prph2<tm1Nmc>"
17 47394802 NC_000083.6:g.47394802T>C T C . . ANN=C|missense_variant|MODERATE|Guca1a|14913|transcript|ENSMUST00000059348.8|Coding|4/4|c.464A>G|p.(E155G)|629/6027|464/609|155/203||;allele_of_genes="MGI:102770";alleles="MGI:4999776";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.47394802T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161069";strain_name="129/Sv";symbol="Guca1a<sup>tm1.1Hunt</sup>";symbol_text="Guca1a<tm1.1Hunt>"
17 48348613 NC_000083.6:g.48348613_48348614delinsTG CA TG . . ANN=TG|mnv|HIGH|Trem2|83433|transcript|ENSMUST00000024791.14|Coding|2/5|c.197_198delCAinsTG|p.(T66M)|352/5873|197/684|66/228||,TG|mnv|HIGH|Trem2|83433|transcript|ENSMUST00000113237.3|Coding|2/5|c.197_198delCAinsTG|p.(T66M)|265/5786|197/750|66/250||,TG|non_coding_transcript_exon_variant|LOW|Trem2|83433|transcript|ENSMUST00000132340.1|Noncoding|1/4|n.2174_2175delCAinsTG||2174/7708||||,TG|non_coding_transcript_exon_variant|LOW|Trem2|83433|transcript|ENSMUST00000148545.1|Noncoding|2/3|n.264_265delCAinsTG||264/4070||||;allele_of_genes="MGI:1913150";alleles="MGI:3806795";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.48348613_48348614delinsTG";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Trem2<sup>tm1Cln</sup>";symbol_text="Trem2<tm1Cln>"
17 51782639 NC_000083.6:g.51782639A>T A T . . ANN=T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000129667.7|Coding|7/11|c.1179T>A|p.(F393L)|1337/87112|1179/2295|393/765||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000133574.7|Coding|7/11|c.1179T>A|p.(F393L)|1341/94397|1179/2295|393/765||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000140979.7|Coding|7/12|c.1179T>A|p.(F393L)|2117/73205|1179/2388|393/796||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000144331.7|Coding|7/11|c.1179T>A|p.(F393L)|1416/96486|1179/2295|393/765||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000152830.8|Coding|7/11|c.1179T>A|p.(F393L)|4450/75534|1179/2295|393/765||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000169480.7|Coding|7/11|c.1179T>A|p.(F393L)|1368/90401|1179/2295|393/765||,T|missense_variant|MODERATE|Satb1|20230|transcript|ENSMUST00000176669.7|Coding|6/10|c.1179T>A|p.(F393L)|2845/71468|1179/2295|393/765||;allele_of_genes="MGI:105084";alleles="MGI:5563413";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.51782639A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Satb1<sup>m1Anu</sup>";symbol_text="Satb1<m1Anu>"
17 56271339 NC_000083.6:g.56271339A>G A G . . ANN=G|missense_variant|MODERATE|Ticam1|106759|transcript|ENSMUST00000058136.8|Coding|2/2|c.755T>C|p.(I252T)|972/7468|755/2199|252/733||;allele_of_genes="MGI:2147032";alleles="MGI:5789548";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.56271339A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ticam1<sup>M2Btlr</sup>";symbol_text="Ticam1<M2Btlr>"
17 56276693 NC_000083.6:g.56276693C>T C T . . ANN=T|splice_donor_variant&5_prime_UTR_intron_variant|HIGH|Ticam1|106759|transcript|ENSMUST00000058136.8|Coding|1/1|c.-125+1G>A|p.(%3D)|94/7468|1/2199|1/733||;allele_of_genes="MGI:2147032";alleles="MGI:6114756";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000083.6:g.56276693C>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ticam1<sup>M3Btlr</sup>";symbol_text="Ticam1<M3Btlr>"
17 57401977 NC_000083.6:g.57401977A>G A G . . ANN=G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000004850.7|Coding|3/23|c.167A>G|p.(Y56C)|179/124810|167/2796|56/932||,G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000086763.12|Coding|3/22|c.167A>G|p.(Y56C)|202/124837|167/2796|56/932||,G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000232808.1|Coding|2/4|c.104A>G|p.(Y35C)|130/44084|104/376|35/125||,G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000233840.1|Coding|3/8|c.167A>G|p.(Y56C)|194/55059|167/890|56/296||,G|coding_transcript_intron_variant|LOW|Adgre1|13733|transcript|ENSMUST00000233376.1|Coding|2/3|c.95-4857A>G|p.(%3D)|124/49721|95/313|32/104||;allele_of_genes="MGI:106912";alleles="MGI:6113851";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.57401977A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adgre1<sup>M4Btlr</sup>";symbol_text="Adgre1<M4Btlr>"
17 57402811 NC_000083.6:g.57402811A>G A G . . ANN=G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000004850.7|Coding|5/23|c.467A>G|p.(Y156C)|479/124810|467/2796|156/932||,G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000086763.12|Coding|5/22|c.467A>G|p.(Y156C)|502/124837|467/2796|156/932||,G|missense_variant|MODERATE|Adgre1|13733|transcript|ENSMUST00000233840.1|Coding|5/8|c.467A>G|p.(Y156C)|494/55059|467/890|156/296||,G|coding_transcript_intron_variant|LOW|Adgre1|13733|transcript|ENSMUST00000233376.1|Coding|2/3|c.95-4023A>G|p.(%3D)|124/49721|95/313|32/104||;allele_of_genes="MGI:106912";alleles="MGI:5789555";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.57402811A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adgre1<sup>m3Btlr</sup>";symbol_text="Adgre1<m3Btlr>"
17 57402841 NC_000083.6:g.57402841T>A T A . . ANN=A|stop_gained|HIGH|Adgre1|13733|transcript|ENSMUST00000004850.7|Coding|5/23|c.497T>A|p.(L166*)|509/124810|497/2796|166/932||,A|stop_gained|HIGH|Adgre1|13733|transcript|ENSMUST00000086763.12|Coding|5/22|c.497T>A|p.(L166*)|532/124837|497/2796|166/932||,A|stop_gained|HIGH|Adgre1|13733|transcript|ENSMUST00000233840.1|Coding|5/8|c.497T>A|p.(L166*)|524/55059|497/890|166/296||,A|coding_transcript_intron_variant|LOW|Adgre1|13733|transcript|ENSMUST00000233376.1|Coding|2/3|c.95-3993T>A|p.(%3D)|124/49721|95/313|32/104||;allele_of_genes="MGI:106912";alleles="MGI:5478734";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000083.6:g.57402841T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Adgre1<sup>m2Btlr</sup>";symbol_text="Adgre1<m2Btlr>"
17 69387727 NC_000083.6:g.69387727C>A C A . . ANN=A|stop_gained|HIGH|Zbtb14|22666|transcript|ENSMUST00000062369.13|Coding|3/3|c.419C>A|p.(S140*)|602/7432|419/1350|140/450||,A|stop_gained|HIGH|Zbtb14|22666|transcript|ENSMUST00000112674.7|Coding|3/3|c.419C>A|p.(S140*)|720/7701|419/1350|140/450||,A|stop_gained|HIGH|Zbtb14|22666|transcript|ENSMUST00000112676.3|Coding|3/3|c.419C>A|p.(S140*)|886/7360|419/1350|140/450||;allele_of_genes="MGI:1195345";alleles="MGI:5476175";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000083.6:g.69387727C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zbtb14<sup>b2b1982Clo</sup>";symbol_text="Zbtb14<b2b1982Clo>"
17 71885367 NC_000083.6:g.71885367C>T C T . . ANN=T|missense_variant|MODERATE|Alk|11682|transcript|ENSMUST00000086639.5|Coding|25/29|c.3836G>A|p.(R1279Q)|3954/734856|3836/4866|1279/1622||;allele_of_genes="MGI:103305";alleles="MGI:5705324";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.71885367C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Alk<sup>tm1.1Ics</sup>";symbol_text="Alk<tm1.1Ics>"
17 71894201 NC_000083.6:g.71894201A>G A G . . ANN=G|missense_variant|MODERATE|Alk|11682|transcript|ENSMUST00000086639.5|Coding|23/29|c.3532T>C|p.(F1178L)|3650/734856|3532/4866|1178/1622||;allele_of_genes="MGI:103305";alleles="MGI:5705326";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.71894201A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2161070";strain_name="129S2/SvPas";symbol="Alk<sup>tm2.1Ics</sup>";symbol_text="Alk<tm2.1Ics>"
17 75273979 NC_000083.6:g.75273979T>A T A . . ANN=A|stop_gained|HIGH|Ltbp1|268977|transcript|ENSMUST00000001927.11|Coding|11/34|c.2088T>A|p.(C696*)|2406/386200|2088/5139|696/1713||,A|stop_gained|HIGH|Ltbp1|268977|transcript|ENSMUST00000112514.1|Coding|7/30|c.1134T>A|p.(C378*)|1205/212416|1134/4026|378/1342||,A|stop_gained|HIGH|Ltbp1|268977|transcript|ENSMUST00000112516.7|Coding|7/30|c.1134T>A|p.(C378*)|1306/212527|1134/4185|378/1395||,A|stop_gained|HIGH|Ltbp1|268977|transcript|ENSMUST00000135447.7|Coding|7/21|c.1134T>A|p.(C378*)|1306/170124|1134/2942|378/980||,A|stop_gained|HIGH|Ltbp1|268977|transcript|ENSMUST00000234490.1|Coding|12/35|c.2091T>A|p.(C697*)|2409/385761|2091/5142|697/1714||;allele_of_genes="MGI:109151";alleles="MGI:5316784";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000083.6:g.75273979T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ltbp1<sup>b2b1000Clo</sup>";symbol_text="Ltbp1<b2b1000Clo>"
17 81388982 NC_000083.6:g.81388982A>T A T . . ANN=T|missense_variant|MODERATE|Slc8a1|20541|transcript|ENSMUST00000086538.9|Coding|10/10|c.2622T>A|p.(N874K)|2622/260917|2622/2913|874/971||,T|missense_variant|MODERATE|Slc8a1|20541|transcript|ENSMUST00000163123.2|Coding|11/11|c.2622T>A|p.(N874K)|2722/349854|2622/2913|874/971||,T|missense_variant|MODERATE|Slc8a1|20541|transcript|ENSMUST00000163680.8|Coding|10/10|c.2622T>A|p.(N874K)|2622/260917|2622/2913|874/971||,T|missense_variant|MODERATE|Slc8a1|20541|transcript|ENSMUST00000234131.1|Coding|8/8|c.2586T>A|p.(N862K)|2587/276504|2586/2877|862/959||,T|missense_variant|MODERATE|Slc8a1|20541|transcript|ENSMUST00000235015.1|Coding|11/12|c.2622T>A|p.(N874K)|2722/352775|2622/2823|874/941||;allele_of_genes="MGI:107956";alleles="MGI:4849923";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.81388982A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Slc8a1<sup>m51207Hubr</sup>";symbol_text="Slc8a1<m51207Hubr>"
17 85621991 NC_000083.6:g.85621991T>C T C . . ANN=C|missense_variant|MODERATE|Six3|20473|transcript|ENSMUST00000162695.2|Coding|1/3|c.752T>C|p.(V251A)|961/8272|752/1044|251/348||,C|missense_variant|MODERATE|Six3|20473|transcript|ENSMUST00000175898.3|Coding|2/3|c.752T>C|p.(V251A)|866/11615|752/1002|251/334||,C|missense_variant|MODERATE|Six3|20473|transcript|ENSMUST00000176081.2|Coding|1/2|c.752T>C|p.(V251A)|1158/5358|752/1002|251/334||;allele_of_genes="MGI:102764";alleles="MGI:3814869";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.85621991T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653465";strain_name="129S1/Sv-Oca2<+>_Tyr<+>_Kitl<+>";symbol="Six3<sup>tm3Gco</sup>";symbol_text="Six3<tm3Gco>"
17 86827546 NC_000083.6:g.86827546_86827548delinsTGG GGC TGG . . ANN=TGG|mnv|HIGH|Epas1|13819|transcript|ENSMUST00000024954.10|Coding|12/16|c.1606_1608delGGCinsTGG|p.(G536W)|2189/79711|1606/2625|536/875||;allele_of_genes="MGI:109169";alleles="MGI:5518445";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.86827546_86827548delinsTGG";impact="MODERATE";soTerm="MNV";strain_id="MGI:2159769";strain_name="C57BL/6";symbol="Epas1<sup>tm1.1Fsl</sup>";symbol_text="Epas1<tm1.1Fsl>"
17 87718616 NC_000083.6:g.87718616_87718617delinsAC GT AC . . ANN=AC|mnv|HIGH|Msh2|17685|transcript|ENSMUST00000024967.13|Coding|13/16|c.2021_2022delGTinsAC|p.(G674D)|2287/51384|2021/2808|674/936||;allele_of_genes="MGI:101816";alleles="MGI:4460264";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.87718616_87718617delinsAC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Msh2<sup>tm3.1Rak</sup>";symbol_text="Msh2<tm3.1Rak>"
17 87718616 NC_000083.6:g.87718616G>C G C . . ANN=C|missense_variant|MODERATE|Msh2|17685|transcript|ENSMUST00000024967.13|Coding|13/16|c.2021G>C|p.(G674A)|2287/51384|2021/2808|674/936||;allele_of_genes="MGI:101816";alleles="MGI:2680817";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000083.6:g.87718616G>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Msh2<sup>tm1Wed</sup>";symbol_text="Msh2<tm1Wed>"
17 87980223 NC_000083.6:g.87980223G>A G A . . ANN=A|stop_gained|HIGH|Msh6|17688|transcript|ENSMUST00000005503.4|Coding|2/10|c.290G>A|p.(W97*)|377/15831|290/4077|97/1359||,A|stop_gained|HIGH|Msh6|17688|transcript|ENSMUST00000234756.1|Coding|2/4|c.53G>A|p.(W18*)|128/4856|53/503|18/167||,A|non_coding_transcript_intron_variant|LOW|Msh6|17688|transcript|ENSMUST00000234936.1|Noncoding|1/1|n.146-4223G>A||146/9685||||;allele_of_genes="MGI:1343961";alleles="MGI:6114079";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000083.6:g.87980223G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Msh6<sup>m1Btlr</sup>";symbol_text="Msh6<m1Btlr>"
18 4333965 NC_000084.6:g.4333965G>A G A . . ANN=A|missense_variant|MODERATE|Map3k8|26410|transcript|ENSMUST00000025078.9|Coding|7/8|c.1126C>T|p.(R376C)|1312/21689|1126/1404|376/468||,A|3_prime_UTR_exon_variant|LOW|Map3k8|26410|transcript|ENSMUST00000173930.7|Coding|6/7|c.*318C>T|p.(%3D)|992/21618|547/546|183/182||,A|non_coding_transcript_exon_variant|LOW|Map3k8|26410|transcript|ENSMUST00000105472.2|Noncoding|3/4|n.383C>T||383/4955||||,A|non_coding_transcript_exon_variant|LOW|Map3k8|26410|transcript|ENSMUST00000173708.1|Noncoding|2/2|n.532C>T||532/1204||||;allele_of_genes="MGI:1346878";alleles="MGI:5688599";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.4333965G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Map3k8<sup>m3Btlr</sup>";symbol_text="Map3k8<m3Btlr>"
18 4339548 NC_000084.6:g.4339548A>T A T . . ANN=T|missense_variant|MODERATE|Map3k8|26410|transcript|ENSMUST00000025078.9|Coding|5/8|c.822T>A|p.(S274R)|1008/21689|822/1404|274/468||,T|3_prime_UTR_exon_variant|LOW|Map3k8|26410|transcript|ENSMUST00000173930.7|Coding|4/7|c.*14T>A|p.(%3D)|688/21618|547/546|183/182||;allele_of_genes="MGI:1346878";alleles="MGI:6113556";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.4339548A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Map3k8<sup>M4Btlr</sup>";symbol_text="Map3k8<M4Btlr>"
18 4339552 NC_000084.6:g.4339552A>C A C . . ANN=C|missense_variant|MODERATE|Map3k8|26410|transcript|ENSMUST00000025078.9|Coding|5/8|c.818T>G|p.(L273R)|1004/21689|818/1404|273/468||,C|3_prime_UTR_exon_variant|LOW|Map3k8|26410|transcript|ENSMUST00000173930.7|Coding|4/7|c.*10T>G|p.(%3D)|684/21618|547/546|183/182||;allele_of_genes="MGI:1346878";alleles="MGI:5582496";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.4339552A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Map3k8<sup>m2Btlr</sup>";symbol_text="Map3k8<m2Btlr>"
18 4339608 NC_000084.6:g.4339608A>T A T . . ANN=T|splice_region_variant&coding_transcript_intron_variant|LOW|Map3k8|26410|transcript|ENSMUST00000025078.9|Coding|4/7|c.767-5T>A|p.?|953/21689|767/1404|256/468||,T|splice_region_variant&coding_transcript_intron_variant|LOW|Map3k8|26410|transcript|ENSMUST00000173930.7|Coding|3/6|c.505-5T>A|p.?|633/21618|505/546|169/182||;allele_of_genes="MGI:1346878";alleles="MGI:3795881";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.4339608A>T";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Map3k8<sup>M1Btlr</sup>";symbol_text="Map3k8<M1Btlr>"
18 5770554 NC_000084.6:g.5770554T>A T A . . ANN=A|stop_gained|HIGH|Zeb1|21417|transcript|ENSMUST00000025081.12|Coding|7/8|c.2706T>A|p.(Y902*)|2752/183604|2706/3354|902/1118||,A|non_coding_transcript_exon_variant|LOW|Zeb1|21417|transcript|ENSMUST00000177030.1|Noncoding|6/7|n.2382T>A||2382/41724||||;allele_of_genes="MGI:1344313";alleles="MGI:5428990";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000084.6:g.5770554T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zeb1<sup>m1Btlr</sup>";symbol_text="Zeb1<m1Btlr>"
18 5772455 NC_000084.6:g.5772455T>A T A . . ANN=A|missense_variant|MODERATE|Zeb1|21417|transcript|ENSMUST00000025081.12|Coding|8/8|c.2743T>A|p.(C915S)|2789/183604|2743/3354|915/1118||,A|non_coding_transcript_exon_variant|LOW|Zeb1|21417|transcript|ENSMUST00000177030.1|Noncoding|7/7|n.2419T>A||2419/41724||||;allele_of_genes="MGI:1344313";alleles="MGI:5640753";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.5772455T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Zeb1<sup>m2Btlr</sup>";symbol_text="Zeb1<m2Btlr>"
18 7127234 NC_000084.6:g.7127234A>T A T . . ANN=T|missense_variant|MODERATE|Armc4|74934|transcript|ENSMUST00000081275.4|Coding|20/21|c.2978T>A|p.(M993K)|3120/209669|2978/3114|993/1038||,T|missense_variant|MODERATE|Armc4|74934|transcript|ENSMUST00000234788.1|Coding|20/21|c.2978T>A|p.(M993K)|3127/209728|2978/3114|993/1038||;allele_of_genes="MGI:1922184,MGI:1922184,MGI:1922184,MGI:1922184";alleles="MGI:5437099,MGI:5437099,MGI:5437099,MGI:5437099";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000084.6:g.7127234A>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Armc4<sup>b2b227.1Clo</sup>";symbol_text="Armc4<b2b227.1Clo>"
18 7127234 NC_000084.6:g.7127234A>T A T . . ANN=T|missense_variant|MODERATE|Armc4|74934|transcript|ENSMUST00000081275.4|Coding|20/21|c.2978T>A|p.(M993K)|3120/209669|2978/3114|993/1038||,T|missense_variant|MODERATE|Armc4|74934|transcript|ENSMUST00000234788.1|Coding|20/21|c.2978T>A|p.(M993K)|3127/209728|2978/3114|993/1038||;allele_of_genes="MGI:1922184,MGI:1922184,MGI:1922184,MGI:1922184";alleles="MGI:5311373,MGI:5311373,MGI:5311373,MGI:5311373";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000084.6:g.7127234A>T";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Armc4<sup>b2b643Clo</sup>";symbol_text="Armc4<b2b643Clo>"
18 12195072 NC_000084.6:g.12195072A>G A G . . ANN=G|missense_variant|MODERATE|Npc1|18145|transcript|ENSMUST00000025279.5|Coding|21/25|c.3179T>C|p.(I1060T)|3342/46708|3179/3834|1060/1278||,G|non_coding_transcript_exon_variant|LOW|Npc1|18145|transcript|ENSMUST00000234044.1|Noncoding|1/5|n.336T>C||336/5716||||,G|non_coding_transcript_intron_variant|LOW|Gm15956|.|transcript|ENSMUST00000153352.1|Noncoding|1/1|n.85+1220A>G||86/4908||||;allele_of_genes="MGI:1097712,MGI:1097712,MGI:1097712,MGI:1097712";alleles="MGI:5641735,MGI:5641735,MGI:5641735,MGI:5641735";geneLevelConsequence="missense_variant,intron_variant,missense_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.12195072A>G";impact="MODERATE,MODIFIER,MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Npc1<sup>tm1.1Dso</sup>";symbol_text="Npc1<tm1.1Dso>"
18 12196511 NC_000084.6:g.12196511T>C T C . . ANN=C|missense_variant|MODERATE|Npc1|18145|transcript|ENSMUST00000025279.5|Coding|20/25|c.3014A>G|p.(D1005G)|3177/46708|3014/3834|1005/1278||,C|non_coding_transcript_intron_variant|LOW|Gm15956|.|transcript|ENSMUST00000153352.1|Noncoding|1/1|n.86-1748T>C||86/4908||||;allele_of_genes="MGI:1097712,MGI:1097712";alleles="MGI:2686741,MGI:2686741";geneLevelConsequence="missense_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.12196511T>C";impact="MODERATE,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Npc1<sup>nmf164</sup>";symbol_text="Npc1<nmf164>"
18 12197179 NC_000084.6:g.12197179T>G T G . . ANN=G|splice_region_variant&coding_transcript_intron_variant|LOW|Npc1|18145|transcript|ENSMUST00000025279.5|Coding|19/24|c.2911+3A>C|p.?|3075/46708|2912/3834|971/1278||,G|non_coding_transcript_intron_variant|LOW|Gm15956|.|transcript|ENSMUST00000153352.1|Noncoding|1/1|n.86-1080T>G||86/4908||||;allele_of_genes="MGI:1097712,MGI:1097712";alleles="MGI:1857051,MGI:1857051";geneLevelConsequence="splice_region_variant,intron_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.12197179T>G";impact="LOW,MODIFIER";soTerm="point_mutation";strain_id="MGI:2159908";strain_name="C57BLKS/J";symbol="Npc1<sup>spm</sup>";symbol_text="Npc1<spm>"
18 12214354 NC_000084.6:g.12214354_12214358delinsGCTGC AATGG GCTGC . . ANN=GCTGC|mnv|HIGH|Npc1|18145|transcript|ENSMUST00000025279.5|Coding|5/25|c.604_608delCCATTinsGCAGC|p.(P202_F203delinsAA)|767/46708|604/3834|202/1278||;allele_of_genes="MGI:1097712";alleles="MGI:5293759";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.12214354_12214358delinsGCTGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Npc1<sup>tm1Mbjg</sup>";symbol_text="Npc1<tm1Mbjg>"
18 31667011 NC_000084.6:g.31667011T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Sap130|269003|transcript|ENSMUST00000025109.7|Coding|10/20|c.1213+2T>C|p.?|1327/88679|1214/3171|405/1057||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Sap130|269003|transcript|ENSMUST00000178164.7|Coding|10/21|c.1213+2T>C|p.?|1339/88691|1214/3174|405/1058||,C|splice_donor_variant&non_coding_transcript_intron_variant|HIGH|Sap130|269003|transcript|ENSMUST00000234769.1|Noncoding|10/17|n.1312+2T>C||1313/78636||||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Sap130|269003|transcript|ENSMUST00000235017.1|Coding|10/20|c.1213+2T>C|p.?|1339/88691|1214/3174|405/1058||;allele_of_genes="MGI:1919782";alleles="MGI:5906284";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000084.6:g.31667011T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sap130<sup>b2b635.2Clo</sup>";symbol_text="Sap130<b2b635.2Clo>"
18 36773585 NC_000084.6:g.36773585A>G A G . . ANN=G|missense_variant|MODERATE|Hars|15115|transcript|ENSMUST00000001416.6|Coding|4/13|c.331T>C|p.(S111P)|436/16676|331/1530|111/510||;allele_of_genes="MGI:108087";alleles="MGI:5792078";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.36773585A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hars<sup>mpc231H</sup>";symbol_text="Hars<mpc231H>"
18 37000257 NC_000084.6:g.37000257C>T C T . . ANN=T|missense_variant|MODERATE|Pcdha9|192161|transcript|ENSMUST00000115659.5|Coding|1/4|c.2378C>T|p.(P793L)|2378/189778|2378/2940|793/980||,T|coding_transcript_intron_variant|LOW|Gm42416|100384868|transcript|ENSMUST00000115661.4|Coding|1/3|c.2385+45107C>T|p.(%3D)|2411/887460|2386/2760|796/920||,T|coding_transcript_intron_variant|LOW|Gm37013|103611158|transcript|ENSMUST00000194544.1|Coding|1/2|c.222+30120C>T|p.(%3D)|223/863381|223/313|75/104||,T|coding_transcript_intron_variant|LOW|Gm37388|103611159|transcript|ENSMUST00000193984.1|Coding|1/2|c.338+23979C>T|p.(%3D)|339/857356|339/429|113/143||,T|coding_transcript_intron_variant|LOW|Pcdha1|116731|transcript|ENSMUST00000070797.6|Coding|1/3|c.2388+67585C>T|p.(%3D)|2389/257373|2389/2847|797/949||,T|coding_transcript_intron_variant|LOW|Pcdha1|116731|transcript|ENSMUST00000193839.5|Coding|1/4|c.2388+67585C>T|p.(%3D)|2490/257478|2389/2709|797/903||,T|coding_transcript_intron_variant|LOW|Pcdha4|12936|transcript|ENSMUST00000192295.1|Coding|1/4|c.1602+45890C>T|p.(%3D)|1694/234987|1603/1923|535/641||,T|coding_transcript_intron_variant|LOW|Pcdha4|12936|transcript|ENSMUST00000192512.5|Coding|1/3|c.2385+45107C>T|p.(%3D)|2504/235010|2386/2844|796/948||,T|coding_transcript_intron_variant|LOW|Pcdha6|12937|transcript|ENSMUST00000193389.1|Coding|1/4|c.2382+30120C>T|p.(%3D)|2491/219741|2383/2703|795/901||,T|coding_transcript_intron_variant|LOW|Pcdha6|12937|transcript|ENSMUST00000193777.5|Coding|1/3|c.2382+30120C>T|p.(%3D)|2508/220027|2383/2841|795/947||,T|coding_transcript_intron_variant|LOW|Pcdha7|12939|transcript|ENSMUST00000192631.1|Coding|1/3|c.2355+23979C>T|p.(%3D)|2478/213856|2356/2814|786/938||,T|coding_transcript_intron_variant|LOW|Pcdha5|12941|transcript|ENSMUST00000192168.1|Coding|1/3|c.2346+37472C>T|p.(%3D)|2347/227218|2347/2805|783/935||,T|coding_transcript_intron_variant|LOW|Pcdha3|192163|transcript|ENSMUST00000192503.1|Coding|1/3|c.2370+51681C>T|p.(%3D)|2473/241553|2371/2829|791/943||,T|coding_transcript_intron_variant|LOW|Pcdha2|353234|transcript|ENSMUST00000115662.8|Coding|1/3|c.2388+58552C>T|p.(%3D)|2502/248453|2389/2847|797/949||,T|coding_transcript_intron_variant|LOW|Pcdha2|353234|transcript|ENSMUST00000195590.1|Coding|1/4|c.2388+58552C>T|p.(%3D)|2483/248165|2389/2709|797/903||,T|coding_transcript_intron_variant|LOW|Pcdha8|353235|transcript|ENSMUST00000194038.1|Coding|1/3|c.2382+5409C>T|p.(%3D)|2479/195287|2383/2841|795/947||,T|3_prime_UTR_intron_variant|LOW|Pcdha6|12937|transcript|ENSMUST00000194751.1|Coding|2/5|c.*1889+30120C>T|p.(%3D)|2392/219504|397/396|133/132||;allele_of_genes="MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322,MGI:2447322";alleles="MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282,MGI:5906282";geneLevelConsequence="intron_variant,missense_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.37000257C>T";impact="MODIFIER,MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcdha9<sup>b2b635.1Clo</sup>";symbol_text="Pcdha9<b2b635.1Clo>"
18 37896093 NC_000084.6:g.37896093A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000025337.13|Coding|11/27|c.1163+2T>A|p.?|1227/91779|1164/3795|388/1265||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000080033.6|Coding|10/25|c.1136+2T>A|p.?|1230/90588|1137/3768|379/1256||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115629.8|Coding|10/25|c.1031+2T>A|p.?|1049/62812|1032/3663|344/1221||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115631.7|Coding|12/28|c.1031+2T>A|p.?|1372/91821|1032/3663|344/1221||,T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115634.7|Coding|10/26|c.1136+2T>A|p.?|1295/91876|1137/3768|379/1256||;allele_of_genes="MGI:1194490";alleles="MGI:6113366";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000084.6:g.37896093A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Diaph1<sup>M2Btlr</sup>";symbol_text="Diaph1<M2Btlr>"
18 37896093 NC_000084.6:g.37896093A>G A G . . ANN=G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000025337.13|Coding|11/27|c.1163+2T>C|p.?|1227/91779|1164/3795|388/1265||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000080033.6|Coding|10/25|c.1136+2T>C|p.?|1230/90588|1137/3768|379/1256||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115629.8|Coding|10/25|c.1031+2T>C|p.?|1049/62812|1032/3663|344/1221||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115631.7|Coding|12/28|c.1031+2T>C|p.?|1372/91821|1032/3663|344/1221||,G|splice_donor_variant&coding_transcript_intron_variant|HIGH|Diaph1|13367|transcript|ENSMUST00000115634.7|Coding|10/26|c.1136+2T>C|p.?|1295/91876|1137/3768|379/1256||;allele_of_genes="MGI:1194490";alleles="MGI:6113373";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000084.6:g.37896093A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Diaph1<sup>M1Btlr</sup>";symbol_text="Diaph1<M1Btlr>"
18 37897550 NC_000084.6:g.37897550C>A C A . . ANN=A|stop_gained|HIGH|Diaph1|13367|transcript|ENSMUST00000025337.13|Coding|9/28|c.877G>T|p.(E293*)|940/91779|877/3795|293/1265||,A|stop_gained|HIGH|Diaph1|13367|transcript|ENSMUST00000080033.6|Coding|8/26|c.850G>T|p.(E284*)|943/90588|850/3768|284/1256||,A|stop_gained|HIGH|Diaph1|13367|transcript|ENSMUST00000115629.8|Coding|8/26|c.745G>T|p.(E249*)|762/62812|745/3663|249/1221||,A|stop_gained|HIGH|Diaph1|13367|transcript|ENSMUST00000115631.7|Coding|10/29|c.745G>T|p.(E249*)|1085/91821|745/3663|249/1221||,A|stop_gained|HIGH|Diaph1|13367|transcript|ENSMUST00000115634.7|Coding|8/27|c.850G>T|p.(E284*)|1008/91876|850/3768|284/1256||,A|non_coding_transcript_exon_variant|LOW|Diaph1|13367|transcript|ENSMUST00000129688.1|Noncoding|1/3|n.393G>T||393/1786||||;allele_of_genes="MGI:1194490";alleles="MGI:6113361";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000084.6:g.37897550C>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Diaph1<sup>m3Btlr</sup>";symbol_text="Diaph1<m3Btlr>"
18 42395370 NC_000084.6:g.42395372_42395374del CGCT C . . ANN=C|inframe_deletion|MODERATE|Pou4f3|18998|transcript|ENSMUST00000025374.3|Coding|2/2|c.379_381del|p.(L127del)|483/2711|379/1017|127/339||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:102523";alleles="MGI:1857795";geneLevelConsequence="inframe_deletion";hgvs_nomenclature="NC_000084.6:g.42395372_42395374del";impact="MODERATE";soTerm="deletion";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pou4f3<sup>ddl</sup>";symbol_text="Pou4f3<ddl>"
18 43999934 NC_000084.6:g.43999934T>G T G . . ANN=G|splice_region_variant&coding_transcript_intron_variant|LOW|Spink5|72432|transcript|ENSMUST00000069245.7|Coding|17/31|c.1610+6T>G|p.?|1682/59267|1611/3054|537/1018||;allele_of_genes="MGI:1919682";alleles="MGI:5319218";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000084.6:g.43999934T>G";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Spink5<sup>m1Btlr</sup>";symbol_text="Spink5<m1Btlr>"
18 45561252 NC_000084.6:g.45561252T>C T C . . ANN=C|missense_variant|MODERATE|Kcnn2|140492|transcript|ENSMUST00000066890.13|Coding|5/11|c.1298T>C|p.(L433P)|1998/417020|1298/2520|433/840||,C|missense_variant|MODERATE|Kcnn2|140492|transcript|ENSMUST00000169783.1|Coding|2/7|c.503T>C|p.(L168P)|503/125729|503/1305|168/435||,C|missense_variant|MODERATE|Kcnn2|140492|transcript|ENSMUST00000183850.7|Coding|5/11|c.503T>C|p.(L168P)|2003/416879|503/1725|168/575||,C|missense_variant|MODERATE|Kcnn2|140492|transcript|ENSMUST00000211323.1|Coding|2/8|c.503T>C|p.(L168P)|503/125730|503/1725|168/575||,C|non_coding_transcript_exon_variant|LOW|Kcnn2|140492|transcript|ENSMUST00000167895.1|Noncoding|2/6|n.503T>C||503/115209||||,C|non_coding_transcript_exon_variant|LOW|Kcnn2|140492|transcript|ENSMUST00000183897.7|Noncoding|2/3|n.846T>C||846/33255||||,C|non_coding_transcript_exon_variant|LOW|Kcnn2|140492|transcript|ENSMUST00000184101.7|Noncoding|2/5|n.1188T>C||1188/111781||||;allele_of_genes="MGI:2153182";alleles="MGI:3800578";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.45561252T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Kcnn2<sup>m1Btlr</sup>";symbol_text="Kcnn2<m1Btlr>"
18 52526907 NC_000084.6:g.52526907C>A C A . . ANN=A|missense_variant|MODERATE|Lox|16948|transcript|ENSMUST00000025409.7|Coding|3/7|c.854G>T|p.(C285F)|1233/12471|854/1236|285/412||,A|missense_variant|MODERATE|Lox|16948|transcript|ENSMUST00000171470.7|Coding|4/8|c.854G>T|p.(C285F)|928/13799|854/1236|285/412||;allele_of_genes="MGI:96817";alleles="MGI:5313524";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.52526907C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Lox<sup>b2b370.2Clo</sup>";symbol_text="Lox<b2b370.2Clo>"
18 57906077 NC_000084.6:g.57906077T>A T A . . ANN=A|stop_gained|HIGH|Slc12a2|20496|transcript|ENSMUST00000115366.2|Coding|10/27|c.1728T>A|p.(C576*)|1857/68144|1728/3621|576/1207||;allele_of_genes="MGI:101924";alleles="MGI:5792088";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000084.6:g.57906077T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Slc12a2<sup>mpc246H</sup>";symbol_text="Slc12a2<mpc246H>"
18 57921812 NC_000084.6:g.57921812A>T A T . . ANN=T|stop_gained|HIGH|Slc12a2|20496|transcript|ENSMUST00000115366.2|Coding|17/27|c.2524A>T|p.(K842*)|2653/68144|2524/3621|842/1207||;allele_of_genes="MGI:101924";alleles="MGI:5538334";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000084.6:g.57921812A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Slc12a2<sup>K842*</sup>";symbol_text="Slc12a2<K842*>"
18 60691176 NC_000084.6:g.60691176A>T A T . . ANN=T|splice_donor_variant&coding_transcript_intron_variant|HIGH|Ndst1|15531|transcript|ENSMUST00000169273.1|Coding|12/13|c.2426+2T>A|p.?|2581/27412|2427/2649|809/883||;allele_of_genes="MGI:104719";alleles="MGI:5491260";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000084.6:g.60691176A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ndst1<sup>b2b2230Clo</sup>";symbol_text="Ndst1<b2b2230Clo>"
18 61078912 NC_000084.6:g.61078912T>C T C . . ANN=C|missense_variant|MODERATE|Pdgfrb|18596|transcript|ENSMUST00000025522.10|Coding|18/23|c.2498T>C|p.(L833P)|2927/39912|2498/3300|833/1100||,C|missense_variant|MODERATE|Pdgfrb|18596|transcript|ENSMUST00000115274.1|Coding|19/24|c.2510T>C|p.(L837P)|2948/39857|2510/3312|837/1104||;allele_of_genes="MGI:97531";alleles="MGI:5618619";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.61078912T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pdgfrb<sup>b2b2903Clo</sup>";symbol_text="Pdgfrb<b2b2903Clo>"
18 65938787 NC_000084.6:g.65938787T>A T A . . ANN=A|missense_variant|MODERATE|Rax|19434|transcript|ENSMUST00000025396.3|Coding|1/3|c.28A>T|p.(M10L)|303/4451|28/1029|10/343||,A|non_coding_transcript_exon_variant|LOW|Raxos1|.|transcript|ENSMUST00000181100.1|Noncoding|2/2|n.887T>A||887/2910||||;allele_of_genes="MGI:109632";alleles="MGI:1856862";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.65938787T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164928";strain_name="ZRDCT/Ch";symbol="Rax<sup>ey1</sup>";symbol_text="Rax<ey1>"
18 66859182 NC_000084.6:g.66859182A>C A C . . ANN=C|missense_variant|MODERATE|Mc4r|17202|transcript|ENSMUST00000057942.2|Coding|1/1|c.859T>G|p.(Y287D)|1291/2758|859/999|287/333||;allele_of_genes="MGI:99457";alleles="MGI:6305820";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.66859182A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Mc4r<sup>m7Btlr</sup>";symbol_text="Mc4r<m7Btlr>"
18 76299825 NC_000084.6:g.76299825C>T C T . . ANN=T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000025453.14|Coding|8/11|c.827C>T|p.(S276L)|1269/44174|827/1404|276/468||,T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000091831.12|Coding|7/10|c.737C>T|p.(S246L)|1068/63030|737/1314|246/438||,T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000113930.2|Coding|6/8|c.737C>T|p.(S246L)|737/40151|737/1305|246/435||,T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000165084.7|Coding|5/5|c.602C>T|p.(S201L)|602/37346|602/614|201/204||,T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000168423.7|Coding|8/11|c.827C>T|p.(S276L)|1279/64152|827/1404|276/468||,T|missense_variant|MODERATE|Smad2|17126|transcript|ENSMUST00000172198.7|Coding|6/6|c.107C>T|p.(S36L)|560/57720|107/175|36/58||;allele_of_genes="MGI:108051";alleles="MGI:2447199";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.76299825C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2165020";strain_name="129S/Sv";symbol="Smad2<sup>m1Mag</sup>";symbol_text="Smad2<m1Mag>"
18 77404907 NC_000084.6:g.77404907T>A T A . . ANN=A|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000096547.9|Coding|30/39|c.4370T>A|p.(I1457N)|4370/160300|4370/6207|1457/2069||,A|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000123410.7|Coding|12/22|c.1772T>A|p.(I591N)|1772/67277|1772/3645|591/1215||,A|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000148341.7|Coding|25/27|c.4043T>A|p.(I1348N)|4288/78272|4043/4435|1348/1478||;allele_of_genes="MGI:1914609";alleles="MGI:5792020";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.77404907T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Loxhd1<sup>mpc188H</sup>";symbol_text="Loxhd1<mpc188H>"
18 77425642 NC_000084.6:g.77425642A>G A G . . ANN=G|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000096547.9|Coding|36/39|c.5323A>G|p.(T1775A)|5323/160300|5323/6207|1775/2069||,G|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000123166.1|Coding|5/8|c.667A>G|p.(T223A)|667/33185|667/1551|223/517||,G|missense_variant|MODERATE|Loxhd1|240411|transcript|ENSMUST00000123410.7|Coding|18/22|c.2725A>G|p.(T909A)|2725/67277|2725/3645|909/1215||;allele_of_genes="MGI:1914609";alleles="MGI:5792020";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000084.6:g.77425642A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Loxhd1<sup>mpc188H</sup>";symbol_text="Loxhd1<mpc188H>"
19 5492794 NC_000085.6:g.5492794T>A T A . . ANN=A|missense_variant|MODERATE|Cfl1|12631|transcript|ENSMUST00000116560.2|Coding|2/6|c.301T>A|p.(F101I)|416/3545|301/684|101/228||,A|missense_variant|MODERATE|Cfl1|12631|transcript|ENSMUST00000209469.1|Coding|2/4|c.301T>A|p.(F101I)|446/4747|301/501|101/167||;allele_of_genes="MGI:101757";alleles="MGI:5473701";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5492794T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Cfl1<sup>c5</sup>";symbol_text="Cfl1<c5>"
19 5641619 NC_000085.6:g.5641619_5641621delinsGCA CGG GCA . . ANN=GCA|mnv|HIGH|Rela|19697|transcript|ENSMUST00000025867.5|Coding|8/11|c.820_822delCGGinsGCA|p.(R274A)|1172/10648|820/1650|274/550||;allele_of_genes="MGI:103290";alleles="MGI:3794988";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5641619_5641621delinsGCA";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Rela<sup>tm1.2Gho</sup>";symbol_text="Rela<tm1.2Gho>"
19 5641625 NC_000085.6:g.5641625_5641627delinsGCC TCT GCC . . ANN=GCC|mnv|HIGH|Rela|19697|transcript|ENSMUST00000025867.5|Coding|8/11|c.826_828delTCTinsGCC|p.(S276A)|1178/10648|826/1650|276/550||;allele_of_genes="MGI:103290";alleles="MGI:3794987";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5641625_5641627delinsGCC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Rela<sup>tm1.1Gho</sup>";symbol_text="Rela<tm1.1Gho>"
19 5641625 NC_000085.6:g.5641625_5641627delinsGAC TCT GAC . . ANN=GAC|mnv|HIGH|Rela|19697|transcript|ENSMUST00000025867.5|Coding|8/11|c.826_828delTCTinsGAC|p.(S276D)|1178/10648|826/1650|276/550||;allele_of_genes="MGI:103290";alleles="MGI:4830882";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5641625_5641627delinsGAC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044417";strain_name="129S6/SvEvTac";symbol="Rela<sup>tm2.1Gho</sup>";symbol_text="Rela<tm2.1Gho>"
19 5747688 NC_000085.6:g.5747688T>C T C . . ANN=C|missense_variant|MODERATE|Ltbp3|16998|transcript|ENSMUST00000081496.5|Coding|9/28|c.1354T>C|p.(C452R)|2342/17629|1354/3762|452/1254||;allele_of_genes="MGI:1101355";alleles="MGI:3723580";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5747688T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ltbp3<sup>m1Btlr</sup>";symbol_text="Ltbp3<m1Btlr>"
19 5760826 NC_000085.6:g.5760826C>A C A . . ANN=A|missense_variant|MODERATE|Scyl1|78891|transcript|ENSMUST00000025890.8|Coding|10/17|c.1462G>T|p.(V488F)|1533/12975|1462/2421|488/807||;allele_of_genes="MGI:1931787";alleles="MGI:6303927";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.5760826C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Scyl1<sup>m1Btlr</sup>";symbol_text="Scyl1<m1Btlr>"
19 6950804 NC_000085.6:g.6950804_6950805delinsGC AG GC . . ANN=GC|mnv|HIGH|Bad|12015|transcript|ENSMUST00000025910.11|Coding|3/4|c.463_464delAGinsGC|p.(S155A)|925/10038|463/615|155/205||,GC|mnv|HIGH|Bad|12015|transcript|ENSMUST00000113423.9|Coding|3/4|c.337_338delAGinsGC|p.(S113A)|469/9393|337/489|113/163||,GC|mnv|HIGH|Bad|12015|transcript|ENSMUST00000113426.7|Coding|3/4|c.463_464delAGinsGC|p.(S155A)|463/9570|463/537|155/179||,GC|mnv|HIGH|Bad|12015|transcript|ENSMUST00000141410.1|Coding|2/3|c.333_334delAGinsGC|p.(*111_A112delinsWP)|333/8374|333/485|111/161||,GC|mnv|HIGH|Bad|12015|transcript|ENSMUST00000145463.1|Coding|1/2|c.38_39delAGinsGC|p.(E13G)|38/1108|38/190|13/63||;allele_of_genes="MGI:1096330";alleles="MGI:3783745";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.6950804_6950805delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:2164439";strain_name="129S4/SvJae";symbol="Bad<sup>tm2Meg</sup>";symbol_text="Bad<tm2Meg>"
19 10200004 NC_000085.6:g.10200004C>T C T . . ANN=T|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000025651.5|Coding|2/2|c.1075G>A|p.(E359K)|1475/4931|1075/1143|359/381||,T|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000116542.8|Coding|2/2|c.1075G>A|p.(E359K)|1234/4806|1075/1143|359/381||,T|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000142241.1|Coding|2/2|c.1075G>A|p.(E359K)|1290/4753|1075/1143|359/381||,T|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000156291.1|Coding|3/3|c.1075G>A|p.(E359K)|1501/5038|1075/1143|359/381||,T|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000081739.1|Noncoding|1/1|n.816C>T||816/3194||||,T|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000150038.1|Noncoding|2/2|n.952C>T||952/4017||||;allele_of_genes="MGI:102779";alleles="MGI:5629667";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.10200004C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5653466";strain_name="129S1/Sv";symbol="Fen1<sup>tm2.1Bhsh</sup>";symbol_text="Fen1<tm2.1Bhsh>"
19 10200048 NC_000085.6:g.10200047_10200052delinsGGCGGC AAGAA GCGGC . . ANN=GCGGC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000025651.5|Coding|2/2|c.1027_1031delTTCTTinsGCCGC|p.(F343_F344delinsAA)|1427/4931|1027/1143|343/381||,GCGGC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000116542.8|Coding|2/2|c.1027_1031delTTCTTinsGCCGC|p.(F343_F344delinsAA)|1186/4806|1027/1143|343/381||,GCGGC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000142241.1|Coding|2/2|c.1027_1031delTTCTTinsGCCGC|p.(F343_F344delinsAA)|1242/4753|1027/1143|343/381||,GCGGC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000156291.1|Coding|3/3|c.1027_1031delTTCTTinsGCCGC|p.(F343_F344delinsAA)|1453/5038|1027/1143|343/381||,GCGGC|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000081739.1|Noncoding|1/1|n.860_864delAAGAAinsGCGGC||860/3194||||,GCGGC|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000150038.1|Noncoding|2/2|n.996_1000delAAGAAinsGCGGC||996/4017||||;allele_of_genes="MGI:102779";alleles="MGI:3711354";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.10200047_10200052delinsGGCGGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:5653466";strain_name="129S1/Sv";symbol="Fen1<sup>tm1Bhsh</sup>";symbol_text="Fen1<tm1Bhsh>"
19 10200048 NC_000085.6:g.10200047_10200052delinsGGCGCC AAGAA GCGCC . . ANN=GCGCC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000025651.5|Coding|2/2|c.1027_1031delTTCTTinsGGCGC|p.(F343_F344delinsGA)|1427/4931|1027/1143|343/381||,GCGCC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000116542.8|Coding|2/2|c.1027_1031delTTCTTinsGGCGC|p.(F343_F344delinsGA)|1186/4806|1027/1143|343/381||,GCGCC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000142241.1|Coding|2/2|c.1027_1031delTTCTTinsGGCGC|p.(F343_F344delinsGA)|1242/4753|1027/1143|343/381||,GCGCC|mnv|HIGH|Fen1|14156|transcript|ENSMUST00000156291.1|Coding|3/3|c.1027_1031delTTCTTinsGGCGC|p.(F343_F344delinsGA)|1453/5038|1027/1143|343/381||,GCGCC|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000081739.1|Noncoding|1/1|n.860_864delAAGAAinsGCGCC||860/3194||||,GCGCC|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000150038.1|Noncoding|2/2|n.996_1000delAAGAAinsGCGCC||996/4017||||;allele_of_genes="MGI:102779";alleles="MGI:3808783";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.10200047_10200052delinsGGCGCC";impact="MODERATE";soTerm="MNV";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Fen1<sup>tm3Klng</sup>";symbol_text="Fen1<tm3Klng>"
19 10200599 NC_000085.6:g.10200599C>G C G . . ANN=G|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000025651.5|Coding|2/2|c.480G>C|p.(E160D)|880/4931|480/1143|160/381||,G|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000116542.8|Coding|2/2|c.480G>C|p.(E160D)|639/4806|480/1143|160/381||,G|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000142241.1|Coding|2/2|c.480G>C|p.(E160D)|695/4753|480/1143|160/381||,G|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000156291.1|Coding|3/3|c.480G>C|p.(E160D)|906/5038|480/1143|160/381||,G|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000081739.1|Noncoding|1/1|n.1411C>G||1411/3194||||,G|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000150038.1|Noncoding|2/2|n.1547C>G||1547/4017||||;allele_of_genes="MGI:102779";alleles="MGI:3808779";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.10200599C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3044210";strain_name="129X1/SvJ";symbol="Fen1<sup>tm2Klng</sup>";symbol_text="Fen1<tm2Klng>"
19 10200599 NC_000085.6:g.10200599C>A C A . . ANN=A|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000025651.5|Coding|2/2|c.480G>T|p.(E160D)|880/4931|480/1143|160/381||,A|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000116542.8|Coding|2/2|c.480G>T|p.(E160D)|639/4806|480/1143|160/381||,A|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000142241.1|Coding|2/2|c.480G>T|p.(E160D)|695/4753|480/1143|160/381||,A|missense_variant|MODERATE|Fen1|14156|transcript|ENSMUST00000156291.1|Coding|3/3|c.480G>T|p.(E160D)|906/5038|480/1143|160/381||,A|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000081739.1|Noncoding|1/1|n.1411C>A||1411/3194||||,A|non_coding_transcript_exon_variant|LOW|Gm10143|.|transcript|ENSMUST00000150038.1|Noncoding|2/2|n.1547C>A||1547/4017||||;allele_of_genes="MGI:102779";alleles="MGI:5767323";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.10200599C>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Fen1<sup>tm3.1Bhsh</sup>";symbol_text="Fen1<tm3.1Bhsh>"
19 17447643 NC_000085.6:g.17447643A>T A T . . ANN=T|missense_variant|MODERATE|Pcsk5|18552|transcript|ENSMUST00000025618.14|Coding|35/38|c.4795T>A|p.(C1599S)|5275/404801|4795/5634|1599/1878||;allele_of_genes="MGI:97515";alleles="MGI:5430343";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.17447643A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcsk5<sup>b2b1549Clo</sup>";symbol_text="Pcsk5<b2b1549Clo>"
19 17714798 NC_000085.6:g.17714798T>C T C . . ANN=C|missense_variant|MODERATE|Pcsk5|18552|transcript|ENSMUST00000025618.14|Coding|4/38|c.521A>G|p.(D174G)|1001/404801|521/5634|174/1878||,C|missense_variant|MODERATE|Pcsk5|18552|transcript|ENSMUST00000050715.8|Coding|4/21|c.521A>G|p.(D174G)|1001/279474|521/2748|174/916||;allele_of_genes="MGI:97515";alleles="MGI:5313702";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.17714798T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pcsk5<sup>b2b585Clo</sup>";symbol_text="Pcsk5<b2b585Clo>"
19 18955053 NC_000085.6:g.18955053A>G A G . . ANN=G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000040153.14|Coding|8/10|c.1133T>C|p.(L378P)|1204/70513|1133/1413|378/471||,G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000112828.7|Coding|9/11|c.878T>C|p.(L293P)|1257/64555|878/1158|293/386||,G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000112832.7|Coding|8/10|c.1100T>C|p.(L367P)|1738/180592|1100/1380|367/460||;allele_of_genes="MGI:1343464";alleles="MGI:5640755";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.18955053A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorb<sup>m2Btlr</sup>";symbol_text="Rorb<m2Btlr>"
19 18983351 NC_000085.6:g.18983351A>G A G . . ANN=G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000040153.14|Coding|3/10|c.259T>C|p.(S87P)|330/70513|259/1413|87/471||,G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000112828.7|Coding|4/11|c.4T>C|p.(S2P)|383/64555|4/1158|2/386||,G|missense_variant|MODERATE|Rorb|225998|transcript|ENSMUST00000112832.7|Coding|3/10|c.226T>C|p.(S76P)|864/180592|226/1380|76/460||,G|non_coding_transcript_exon_variant|LOW|Rorb|225998|transcript|ENSMUST00000147907.1|Noncoding|3/4|n.324T>C||324/25132||||,G|non_coding_transcript_exon_variant|LOW|Rorb|225998|transcript|ENSMUST00000149635.7|Noncoding|4/5|n.366T>C||366/25139||||;allele_of_genes="MGI:1343464";alleles="MGI:3835752";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.18983351A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorb<sup>m1Btlr</sup>";symbol_text="Rorb<m1Btlr>"
19 19110557 NC_000085.6:g.19110557A>G A G . . ANN=G|start_lost&missense_variant|HIGH|Rorb|225998|transcript|ENSMUST00000112832.7|Coding|1/10|c.2T>C|p.0?|640/180592|2/1380|1/460||;allele_of_genes="MGI:1343464";alleles="MGI:6114739";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000085.6:g.19110557A>G";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rorb<sup>m3Btlr</sup>";symbol_text="Rorb<m3Btlr>"
19 25127712 NC_000085.6:g.25127712T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|20/47|c.2443+2T>C|p.?|2566/202904|2444/6303|815/2101||;allele_of_genes="MGI:1921396";alleles="MGI:3835422";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000085.6:g.25127712T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:4818406";strain_name="C57BL/6JSfdAnu";symbol="Dock8<sup>cpm</sup>";symbol_text="Dock8<cpm>"
19 25169501 NC_000085.6:g.25169501T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|34/47|c.4341+2T>C|p.?|4464/202904|4342/6303|1448/2101||;allele_of_genes="MGI:1921396";alleles="MGI:6305076";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000085.6:g.25169501T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock8<sup>m4Btlr</sup>";symbol_text="Dock8<m4Btlr>"
19 25176826 NC_000085.6:g.25176826A>T A T . . ANN=T|splice_acceptor_variant&coding_transcript_intron_variant|HIGH|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|38/47|c.4890-2A>T|p.?|5012/202904|4890/6303|1630/2101||;allele_of_genes="MGI:1921396";alleles="MGI:5563483";geneLevelConsequence="splice_acceptor_variant";hgvs_nomenclature="NC_000085.6:g.25176826A>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5566620";strain_name="C57BL/6NCrlAnu";symbol="Dock8<sup>m2Anu</sup>";symbol_text="Dock8<m2Anu>"
19 25183609 NC_000085.6:g.25183609T>C T C . . ANN=C|missense_variant|MODERATE|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|42/48|c.5479T>C|p.(S1827P)|5601/202904|5479/6303|1827/2101||;allele_of_genes="MGI:1921396";alleles="MGI:3835421";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.25183609T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4458871";strain_name="C57BL/6JAnu";symbol="Dock8<sup>pri</sup>";symbol_text="Dock8<pri>"
19 25184941 NC_000085.6:g.25184941G>A G A . . ANN=A|splice_donor_variant&coding_transcript_intron_variant|HIGH|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|43/47|c.5583+1G>A|p.?|5706/202904|5584/6303|1862/2101||;allele_of_genes="MGI:1921396";alleles="MGI:5789558";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000085.6:g.25184941G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Dock8<sup>m1Btlr</sup>";symbol_text="Dock8<m1Btlr>"
19 25188409 NC_000085.6:g.25188409G>T G T . . ANN=T|stop_gained|HIGH|Dock8|76088|transcript|ENSMUST00000025831.6|Coding|44/48|c.5656G>T|p.(E1886*)|5778/202904|5656/6303|1886/2101||;allele_of_genes="MGI:1921396";alleles="MGI:5563486";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000085.6:g.25188409G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5566620";strain_name="C57BL/6NCrlAnu";symbol="Dock8<sup>m1Anu</sup>";symbol_text="Dock8<m1Anu>"
19 27826058 NC_000085.6:g.27826058G>A G A . . ANN=A|stop_gained|HIGH|Rfx3|19726|transcript|ENSMUST00000046898.15|Coding|6/16|c.751C>T|p.(Q251*)|836/244608|751/2175|251/725||,A|stop_gained|HIGH|Rfx3|19726|transcript|ENSMUST00000165566.7|Coding|8/18|c.826C>T|p.(Q276*)|988/221228|826/2250|276/750||,A|stop_gained|HIGH|Rfx3|19726|transcript|ENSMUST00000172907.7|Coding|9/19|c.826C>T|p.(Q276*)|1060/242728|826/2250|276/750||,A|stop_gained|HIGH|Rfx3|19726|transcript|ENSMUST00000173863.1|Coding|6/15|c.784C>T|p.(Q262*)|784/132441|784/1377|262/459||,A|stop_gained|HIGH|Rfx3|19726|transcript|ENSMUST00000174850.7|Coding|7/17|c.826C>T|p.(Q276*)|1003/243002|826/2250|276/750||,A|non_coding_transcript_exon_variant|LOW|Rfx3|19726|transcript|ENSMUST00000172498.7|Noncoding|3/13|n.353C>T||353/68706||||,A|non_coding_transcript_exon_variant|LOW|Rfx3|19726|transcript|ENSMUST00000173161.1|Noncoding|7/10|n.1013C>T||1013/206024||||;allele_of_genes="MGI:106582";alleles="MGI:5560494";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000085.6:g.27826058G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Rfx3<sup>b2b1213Clo</sup>";symbol_text="Rfx3<b2b1213Clo>"
19 29637375 NC_000085.6:g.29637375G>A G A . . ANN=A|stop_gained|HIGH|Ermp1|226090|transcript|ENSMUST00000159692.7|Coding|4/15|c.772C>T|p.(Q258*)|832/40202|772/2697|258/899||,A|stop_gained|HIGH|Ermp1|226090|transcript|ENSMUST00000162534.1|Coding|3/13|c.211C>T|p.(Q71*)|211/33621|211/1254|71/418||,A|missense_variant|MODERATE|Ermp1|226090|transcript|ENSMUST00000054083.12|Coding|3/14|c.476C>T|p.(S159L)|476/37986|476/513|159/171||,A|non_coding_transcript_exon_variant|LOW|Ermp1|226090|transcript|ENSMUST00000159243.1|Noncoding|4/7|n.807C>T||807/20393||||,A|non_coding_transcript_exon_variant|LOW|Ermp1|226090|transcript|ENSMUST00000161124.7|Noncoding|2/6|n.147C>T||147/12516||||;allele_of_genes="MGI:106250";alleles="MGI:5615223";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000085.6:g.29637375G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Ermp1<sup>b2b2633Clo</sup>";symbol_text="Ermp1<b2b2633Clo>"
19 30113754 NC_000085.6:g.30113754A>G A G . . ANN=G|missense_variant|MODERATE|Gldc|104174|transcript|ENSMUST00000025778.7|Coding|20/25|c.2440T>C|p.(S814P)|2598/76970|2440/3078|814/1026||;allele_of_genes="MGI:1341155";alleles="MGI:5560908";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.30113754A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Gldc<sup>b2b2679Clo</sup>";symbol_text="Gldc<b2b2679Clo>"
19 31764695 NC_000085.6:g.31764695C>G C G . . ANN=G|missense_variant|MODERATE|Prkg1|19091|transcript|ENSMUST00000065067.12|Coding|1/18|c.128G>C|p.(C43S)|339/1197483|128/2016|43/672||,G|missense_variant|MODERATE|Prkg1|19091|transcript|ENSMUST00000182685.1|Coding|1/3|c.128G>C|p.(C43S)|279/22860|128/318|43/106||;allele_of_genes="MGI:108174";alleles="MGI:5313455";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.31764695C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164831";strain_name="C57BL/6NTac";symbol="Prkg1<sup>tm1.1Arte</sup>";symbol_text="Prkg1<tm1.1Arte>"
19 41302606 NC_000085.6:g.41302606T>A T A . . ANN=A|stop_gained|HIGH|Pik3ap1|83490|transcript|ENSMUST00000059672.7|Coding|10/17|c.1486A>T|p.(K496*)|1587/110853|1486/2436|496/812||;allele_of_genes="MGI:1933177";alleles="MGI:5429067";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000085.6:g.41302606T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pik3ap1<sup>m1Btlr</sup>";symbol_text="Pik3ap1<m1Btlr>"
19 41327909 NC_000085.6:g.41327909A>G A G . . ANN=G|missense_variant|MODERATE|Pik3ap1|83490|transcript|ENSMUST00000059672.7|Coding|6/17|c.913T>C|p.(S305P)|1014/110853|913/2436|305/812||;allele_of_genes="MGI:1933177";alleles="MGI:6114668";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.41327909A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pik3ap1<sup>m2Btlr</sup>";symbol_text="Pik3ap1<m2Btlr>"
19 45039201 NC_000085.6:g.45039201A>G A G . . ANN=G|missense_variant|MODERATE|Pdzd7|100503041|transcript|ENSMUST00000145391.7|Coding|6/17|c.833T>C|p.(L278P)|1147/19708|833/3066|278/1022||,G|missense_variant|MODERATE|Pdzd7|100503041|transcript|ENSMUST00000169459.2|Coding|5/16|c.833T>C|p.(L278P)|962/18866|833/3066|278/1022||;allele_of_genes="MGI:3608325";alleles="MGI:5792094";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.45039201A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Pdzd7<sup>mpc265H</sup>";symbol_text="Pdzd7<mpc265H>"
19 46003836 NC_000085.6:g.46003836T>A T A . . ANN=A|missense_variant|MODERATE|Hps6|20170|transcript|ENSMUST00000099393.2|Coding|1/1|c.211T>A|p.(W71R)|359/2696|211/2418|71/806||,A|non_coding_transcript_intron_variant|LOW|4930505N22Rik|100174921|transcript|ENSMUST00000181820.1|Noncoding|1/1|n.583+5117T>A||584/15250||||;allele_of_genes="MGI:2181763";alleles="MGI:3799748";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.46003836T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Hps6<sup>ru-Btlr</sup>";symbol_text="Hps6<ru-Btlr>"
19 46307441 NC_000085.6:g.46307441G>A G A . . ANN=A|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000073116.11|Coding|7/23|c.473G>A|p.(R158H)|631/7354|473/2700|158/900||,A|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000111881.2|Coding|6/22|c.473G>A|p.(R158H)|782/6396|473/2700|158/900||;allele_of_genes="MGI:1099800";alleles="MGI:6305804";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.46307441G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nfkb2<sup>m5Btlr</sup>";symbol_text="Nfkb2<m5Btlr>"
19 46307720 NC_000085.6:g.46307720T>C T C . . ANN=C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Nfkb2|18034|transcript|ENSMUST00000073116.11|Coding|8/22|c.661+2T>C|p.?|820/7354|662/2700|221/900||,C|splice_donor_variant&coding_transcript_intron_variant|HIGH|Nfkb2|18034|transcript|ENSMUST00000111881.2|Coding|7/21|c.661+2T>C|p.?|971/6396|662/2700|221/900||;allele_of_genes="MGI:1099800";alleles="MGI:6305796";geneLevelConsequence="splice_donor_variant";hgvs_nomenclature="NC_000085.6:g.46307720T>C";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nfkb2<sup>m3Btlr</sup>";symbol_text="Nfkb2<m3Btlr>"
19 46308439 NC_000085.6:g.46308439A>G A G . . ANN=G|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000073116.11|Coding|11/23|c.947A>G|p.(D316G)|1105/7354|947/2700|316/900||,G|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000111881.2|Coding|10/22|c.947A>G|p.(D316G)|1256/6396|947/2700|316/900||;allele_of_genes="MGI:1099800";alleles="MGI:6305800";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.46308439A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nfkb2<sup>M4Btlr</sup>";symbol_text="Nfkb2<M4Btlr>"
19 46311626 NC_000085.6:g.46311626A>T A T . . ANN=T|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000073116.11|Coding|22/23|c.2512A>T|p.(M838L)|2670/7354|2512/2700|838/900||,T|missense_variant|MODERATE|Nfkb2|18034|transcript|ENSMUST00000111881.2|Coding|21/22|c.2512A>T|p.(M838L)|2821/6396|2512/2700|838/900||;allele_of_genes="MGI:1099800";alleles="MGI:5640748";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.46311626A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Nfkb2<sup>m2Btlr</sup>";symbol_text="Nfkb2<m2Btlr>"
19 46449904 NC_000085.6:g.46449904T>A T A . . ANN=A|missense_variant|MODERATE|Sufu|24069|transcript|ENSMUST00000039922.12|Coding|4/12|c.530T>A|p.(M177K)|737/91909|530/1455|177/485||,A|missense_variant|MODERATE|Sufu|24069|transcript|ENSMUST00000111867.8|Coding|4/12|c.530T>A|p.(M177K)|715/89131|530/1458|177/486||,A|missense_variant|MODERATE|Sufu|24069|transcript|ENSMUST00000118440.1|Coding|4/10|c.530T>A|p.(M177K)|607/79911|530/1404|177/468||,A|missense_variant|MODERATE|Sufu|24069|transcript|ENSMUST00000120778.7|Coding|3/7|c.395T>A|p.(M132K)|494/58704|395/894|132/298||;allele_of_genes="MGI:1345643";alleles="MGI:5313712";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000085.6:g.46449904T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Sufu<sup>b2b273Clo</sup>";symbol_text="Sufu<b2b273Clo>"
X 8086622 NC_000086.7:g.8086622_8086624delinsTTC GTA TTC . . ANN=TTC|mnv|HIGH|Was|22376|transcript|ENSMUST00000033505.6|Coding|9/12|c.877_879delTACinsGAA|p.(Y293E)|947/9046|877/1563|293/521||,TTC|non_coding_transcript_exon_variant|LOW|Was|22376|transcript|ENSMUST00000146029.1|Noncoding|4/4|n.354_356delTACinsGAA||354/2495||||;allele_of_genes="MGI:105059";alleles="MGI:4362083";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.8086622_8086624delinsTTC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Was<sup>tm1Itl</sup>";symbol_text="Was<tm1Itl>"
X 8086623 NC_000086.7:g.8086623T>A T A . . ANN=A|missense_variant|MODERATE|Was|22376|transcript|ENSMUST00000033505.6|Coding|9/12|c.878A>T|p.(Y293F)|948/9046|878/1563|293/521||,A|non_coding_transcript_exon_variant|LOW|Was|22376|transcript|ENSMUST00000146029.1|Noncoding|4/4|n.355A>T||355/2495||||;allele_of_genes="MGI:105059";alleles="MGI:4362085";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.8086623T>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Was<sup>tm2Itl</sup>";symbol_text="Was<tm2Itl>"
X 8186716 NC_000086.7:g.8186716_8186718delinsAGG TGA AGG . . ANN=AGG|mnv|HIGH|Ebp|13595|transcript|ENSMUST00000033509.14|Coding|4/5|c.395_397delTCAinsCCT|p.(L132_S133delinsPC)|1164/8184|395/693|132/231||,AGG|non_coding_transcript_exon_variant|LOW|Ebp|13595|transcript|ENSMUST00000140011.1|Noncoding|1/2|n.457_459delTCAinsCCT||457/1844||||;allele_of_genes="MGI:107822";alleles="MGI:1857338";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.8186716_8186718delinsAGG";impact="MODERATE";soTerm="MNV";strain_id="MGI:5657835";strain_name="(C57BL/6J_x_Mus_spretus)F1_x_C57BL/6J";symbol="Ebp<sup>Td-ho</sup>";symbol_text="Ebp<Td-ho>"
X 8186902 NC_000086.7:g.8186902C>T C T . . ANN=T|missense_variant|MODERATE|Ebp|13595|transcript|ENSMUST00000033509.14|Coding|3/5|c.319G>A|p.(G107R)|1088/8184|319/693|107/231||,T|missense_variant|MODERATE|Ebp|13595|transcript|ENSMUST00000143223.1|Coding|3/4|c.319G>A|p.(G107R)|480/6653|319/365|107/121||,T|non_coding_transcript_exon_variant|LOW|Ebp|13595|transcript|ENSMUST00000140011.1|Noncoding|1/2|n.273G>A||273/1844||||;allele_of_genes="MGI:107822";alleles="MGI:1857832";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.8186902C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Ebp<sup>Td</sup>";symbol_text="Ebp<Td>"
X 18269150 NC_000086.7:g.18269150_18269151delinsGC CA GC . . ANN=GC|mnv&splice_region_variant|HIGH|Kdm6a|22289|transcript|ENSMUST00000044484.12|Coding|24/29|c.3436_3437delCAinsGC|p.(H1146A)|3867/117362|3436/4206|1146/1402||,GC|mnv&splice_region_variant|HIGH|Kdm6a|22289|transcript|ENSMUST00000052368.8|Coding|24/29|c.3436_3437delCAinsGC|p.(H1146A)|3867/117362|3436/4275|1146/1425||,GC|mnv&splice_region_variant|HIGH|Kdm6a|22289|transcript|ENSMUST00000225336.1|Coding|12/17|c.2222_2223delCAinsGC|p.(S741C)|2222/32587|2222/2992|741/997||,GC|splice_region_variant&3_prime_UTR_exon_variant|LOW|Kdm6a|22289|transcript|ENSMUST00000223885.1|Coding|22/22|c.*2571_*2572delCAinsGC|p.(%3D)|3609/106616|676/675|226/225||;allele_of_genes="MGI:1095419";alleles="MGI:5448826";geneLevelConsequence="missense_variant,splice_region_variant";hgvs_nomenclature="NC_000086.7:g.18269150_18269151delinsGC";impact="MODERATE";soTerm="MNV";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Kdm6a<sup>tm2.1Kaig</sup>";symbol_text="Kdm6a<tm2.1Kaig>"
X 18269157 NC_000086.7:g.18269157A>C A C . . ANN=C|missense_variant|MODERATE|Kdm6a|22289|transcript|ENSMUST00000044484.12|Coding|24/29|c.3443A>C|p.(E1148A)|3874/117362|3443/4206|1148/1402||,C|missense_variant|MODERATE|Kdm6a|22289|transcript|ENSMUST00000052368.8|Coding|24/29|c.3443A>C|p.(E1148A)|3874/117362|3443/4275|1148/1425||,C|missense_variant|MODERATE|Kdm6a|22289|transcript|ENSMUST00000225336.1|Coding|12/17|c.2229A>C|p.(R743S)|2229/32587|2229/2992|743/997||,C|3_prime_UTR_exon_variant|LOW|Kdm6a|22289|transcript|ENSMUST00000223885.1|Coding|22/22|c.*2578A>C|p.(%3D)|3616/106616|676/675|226/225||;allele_of_genes="MGI:1095419";alleles="MGI:5448826";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.18269157A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Kdm6a<sup>tm2.1Kaig</sup>";symbol_text="Kdm6a<tm2.1Kaig>"
X 42104840 NC_000086.7:g.42104839_42104849delinsGATAAAGAGCTC CAAAATCTGT ATAAAGAGCTC . . ANN=ATAAAGAGCTC|frameshift_variant&complex_substitution|HIGH|Xiap|11798|transcript|ENSMUST00000026978.6|Coding|6/6|c.1347_1356delCAAAATCTGTinsATAAAGAGCTC|p.(C449fs)|2018/15929|1347/1491|449/497||,ATAAAGAGCTC|frameshift_variant&complex_substitution|HIGH|Xiap|11798|transcript|ENSMUST00000055483.9|Coding|7/7|c.1347_1356delCAAAATCTGTinsATAAAGAGCTC|p.(C449fs)|1558/38332|1347/1491|449/497||,ATAAAGAGCTC|frameshift_variant&complex_substitution|HIGH|Xiap|11798|transcript|ENSMUST00000115094.7|Coding|8/8|c.1347_1356delCAAAATCTGTinsATAAAGAGCTC|p.(C449fs)|1726/41821|1347/1491|449/497||,ATAAAGAGCTC|frameshift_variant&complex_substitution|HIGH|Xiap|11798|transcript|ENSMUST00000115095.8|Coding|7/7|c.1347_1356delCAAAATCTGTinsATAAAGAGCTC|p.(C449fs)|1854/41259|1347/1491|449/497||,ATAAAGAGCTC|non_coding_transcript_exon_variant|LOW|Xiap|11798|transcript|ENSMUST00000145065.1|Noncoding|6/6|n.591_600delCAAAATCTGTinsATAAAGAGCTC||591/40902||||;allele_of_genes="MGI:107572";alleles="MGI:3809790";geneLevelConsequence="stop_gained,frameshift_variant";hgvs_nomenclature="NC_000086.7:g.42104839_42104849delinsGATAAAGAGCTC";impact="HIGH";soTerm="MNV";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Xiap<sup>tm1Hs</sup>";symbol_text="Xiap<tm1Hs>"
X 49493400 NC_000086.7:g.49493401_49493408del AACTCGTGG A . . ANN=A|frameshift_truncation|HIGH|Arhgap36|75404|transcript|ENSMUST00000042444.6|Coding|2/12|c.174_181del|p.(E58Dfs*7)|204/29666|174/1602|58/534||,A|frameshift_truncation|HIGH|Arhgap36|75404|transcript|ENSMUST00000114904.9|Coding|2/13|c.174_181del|p.(E58Dfs*7)|331/29795|174/1773|58/591||,A|frameshift_truncation|HIGH|Arhgap36|75404|transcript|ENSMUST00000130558.7|Coding|2/7|c.126_133del|p.(E42Dfs*7)|302/32564|126/788|42/262||,A|non_coding_transcript_exon_variant|LOW|Arhgap36|75404|transcript|ENSMUST00000151128.7|Noncoding|2/4|n.191_198del||191/9588||||;allele_of_genes="MGI:1922654";alleles="MGI:6357898";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000086.7:g.49493401_49493408del";impact="HIGH";soTerm="deletion";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Arhgap36<sup>em1Seul</sup>";symbol_text="Arhgap36<em1Seul>"
X 58031925 NC_000086.7:g.58031925G>T G T . . ANN=T|stop_gained|HIGH|Zic3|22773|transcript|ENSMUST00000088627.10|Coding|1/3|c.745G>T|p.(E249*)|1283/5917|745/1401|249/467||,T|stop_gained|HIGH|Zic3|22773|transcript|ENSMUST00000088629.3|Coding|1/3|c.745G>T|p.(E249*)|916/10727|745/1371|249/457||,T|stop_gained|HIGH|Zic3|22773|transcript|ENSMUST00000088631.10|Coding|2/4|c.85G>T|p.(E29*)|314/5561|85/741|29/247||;allele_of_genes="MGI:106676";alleles="MGI:3043028";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.58031925G>T";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5659069";strain_name="BALB/cOlaHsd_or_C3H/HeH";symbol="Zic3<sup>Ka</sup>";symbol_text="Zic3<Ka>"
X 60269987 NC_000086.7:g.60269987G>A G A . . ANN=A|stop_gained|HIGH|Atp11c|320940|transcript|ENSMUST00000033480.12|Coding|19/29|c.1963C>T|p.(Q655*)|2113/180689|1963/3351|655/1117||,A|stop_gained|HIGH|Atp11c|320940|transcript|ENSMUST00000101527.2|Coding|19/30|c.1963C>T|p.(Q655*)|2113/180689|1963/3390|655/1130||,A|stop_gained|HIGH|Atp11c|320940|transcript|ENSMUST00000154051.7|Coding|19/30|c.1963C>T|p.(Q655*)|2105/369409|1963/3390|655/1130||,A|non_coding_transcript_exon_variant|LOW|Atp11c|320940|transcript|ENSMUST00000138569.1|Noncoding|18/27|n.2054C>T||2054/357238||||;allele_of_genes="MGI:1859661";alleles="MGI:4843273";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.60269987G>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atp11c<sup>m1Btlr</sup>";symbol_text="Atp11c<m1Btlr>"
X 60290036 NC_000086.7:g.60290036A>T A T . . ANN=T|missense_variant|MODERATE|Atp11c|320940|transcript|ENSMUST00000033480.12|Coding|12/29|c.1064T>A|p.(I355K)|1214/180689|1064/3351|355/1117||,T|missense_variant|MODERATE|Atp11c|320940|transcript|ENSMUST00000101527.2|Coding|12/30|c.1064T>A|p.(I355K)|1214/180689|1064/3390|355/1130||,T|missense_variant|MODERATE|Atp11c|320940|transcript|ENSMUST00000154051.7|Coding|12/30|c.1064T>A|p.(I355K)|1206/369409|1064/3390|355/1130||,T|non_coding_transcript_exon_variant|LOW|Atp11c|320940|transcript|ENSMUST00000138569.1|Noncoding|11/27|n.1155T>A||1155/357238||||;allele_of_genes="MGI:1859661";alleles="MGI:4843275";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.60290036A>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Atp11c<sup>m2Btlr</sup>";symbol_text="Atp11c<m2Btlr>"
X 71234920 NC_000086.7:g.71234920C>T C T . . ANN=T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000025391.10|Coding|4/14|c.205C>T|p.(R69C)|290/100290|205/1719|69/573||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000033700.11|Coding|4/15|c.205C>T|p.(R69C)|257/100227|205/1812|69/604||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000061970.11|Coding|4/15|c.205C>T|p.(R69C)|290/100290|205/1812|69/604||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000101501.9|Coding|4/7|c.205C>T|p.(R69C)|290/45805|205/489|69/163||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000114617.1|Coding|4/15|c.205C>T|p.(R69C)|279/100184|205/1812|69/604||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000114621.7|Coding|4/14|c.205C>T|p.(R69C)|268/100261|205/1719|69/573||,T|missense_variant|MODERATE|Mtm1|17772|transcript|ENSMUST00000171933.7|Coding|4/15|c.205C>T|p.(R69C)|399/104529|205/1812|69/604||,T|non_coding_transcript_exon_variant|LOW|Mtm1|17772|transcript|ENSMUST00000126208.7|Noncoding|4/10|n.260C>T||260/82545||||,T|non_coding_transcript_exon_variant|LOW|Mtm1|17772|transcript|ENSMUST00000134859.7|Noncoding|4/8|n.265C>T||265/83831||||,T|non_coding_transcript_exon_variant|LOW|Mtm1|17772|transcript|ENSMUST00000151415.7|Noncoding|4/4|n.276C>T||276/21602||||,T|non_coding_transcript_exon_variant|LOW|Mtm1|17772|transcript|ENSMUST00000152810.1|Noncoding|4/5|n.276C>T||276/41217||||,T|non_coding_transcript_exon_variant|LOW|Mtm1|17772|transcript|ENSMUST00000156452.7|Noncoding|4/14|n.237C>T||237/95253||||;allele_of_genes="MGI:1099452";alleles="MGI:5307232";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.71234920C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:5658379";strain_name="(C57BL/6NTac_x_129S6/SvEvTac)F1";symbol="Mtm1<sup>tm1Itl</sup>";symbol_text="Mtm1<tm1Itl>"
X 74035611 NC_000086.7:g.74035611A>C A C . . ANN=C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.1312T>G|p.(S438A)|1416/50403|1312/1506|438/502||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.1261T>G|p.(S421A)|1519/59078|1261/1455|421/485||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.1261T>G|p.(S421A)|1392/108536|1261/1455|421/485||,C|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|5/5|c.*633T>G|p.(%3D)|1353/50324|520/519|174/173||;allele_of_genes="MGI:99918,MGI:99918,MGI:99918,MGI:99918";alleles="MGI:3840525,MGI:3840525,MGI:3840525,MGI:3840525";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000086.7:g.74035611A>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Mecp2<sup>tm3.1Jae</sup>";symbol_text="Mecp2<tm3.1Jae>"
X 74035611 NC_000086.7:g.74035611A>C A C . . ANN=C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.1312T>G|p.(S438A)|1416/50403|1312/1506|438/502||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.1261T>G|p.(S421A)|1519/59078|1261/1455|421/485||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.1261T>G|p.(S421A)|1392/108536|1261/1455|421/485||,C|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|5/5|c.*633T>G|p.(%3D)|1353/50324|520/519|174/173||;allele_of_genes="MGI:99918,MGI:99918,MGI:99918,MGI:99918";alleles="MGI:5302542,MGI:5302542,MGI:5302542,MGI:5302542";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000086.7:g.74035611A>C";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Mecp2<sup>tm1.1Meg</sup>";symbol_text="Mecp2<tm1.1Meg>"
X 74035950 NC_000086.7:g.74035950T>C T C . . ANN=C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.973A>G|p.(T325A)|1077/50403|973/1506|325/502||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.922A>G|p.(T308A)|1180/59078|922/1455|308/485||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.922A>G|p.(T308A)|1053/108536|922/1455|308/485||,C|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|5/5|c.*294A>G|p.(%3D)|1014/50324|520/519|174/173||,C|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|4/4|c.*294A>G|p.(%3D)|888/49941|571/570|191/190||;allele_of_genes="MGI:99918";alleles="MGI:5538511";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.74035950T>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2160041";strain_name="129";symbol="Mecp2<sup>tm3Meg</sup>";symbol_text="Mecp2<tm3Meg>"
X 74035956 NC_000086.7:g.74035956G>A G A . . ANN=A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.967C>T|p.(R323C)|1071/50403|967/1506|323/502||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.916C>T|p.(R306C)|1174/59078|916/1455|306/485||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.916C>T|p.(R306C)|1047/108536|916/1455|306/485||,A|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|5/5|c.*288C>T|p.(%3D)|1008/50324|520/519|174/173||,A|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|4/4|c.*288C>T|p.(%3D)|882/49941|571/570|191/190||;allele_of_genes="MGI:99918,MGI:99918,MGI:99918,MGI:99918";alleles="MGI:5529372,MGI:5529372,MGI:5529372,MGI:5529372";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000086.7:g.74035956G>A";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Mecp2<sup>tm2.1Meg</sup>";symbol_text="Mecp2<tm2.1Meg>"
X 74035956 NC_000086.7:g.74035956G>A G A . . ANN=A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.967C>T|p.(R323C)|1071/50403|967/1506|323/502||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.916C>T|p.(R306C)|1174/59078|916/1455|306/485||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.916C>T|p.(R306C)|1047/108536|916/1455|306/485||,A|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|5/5|c.*288C>T|p.(%3D)|1008/50324|520/519|174/173||,A|3_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|4/4|c.*288C>T|p.(%3D)|882/49941|571/570|191/190||;allele_of_genes="MGI:99918,MGI:99918,MGI:99918,MGI:99918";alleles="MGI:5529365,MGI:5529365,MGI:5529365,MGI:5529365";geneLevelConsequence="missense_variant,missense_variant,missense_variant,missense_variant";hgvs_nomenclature="NC_000086.7:g.74035956G>A";impact="MODERATE,MODERATE,MODERATE,MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Mecp2<sup>tm5.1Bird</sup>";symbol_text="Mecp2<tm5.1Bird>"
X 74036370 NC_000086.7:g.74036370T>A T A . . ANN=A|stop_gained|HIGH|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.553A>T|p.(R185*)|657/50403|553/1506|185/502||,A|stop_gained|HIGH|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.502A>T|p.(R168*)|760/59078|502/1455|168/485||,A|stop_gained|HIGH|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.502A>T|p.(R168*)|633/108536|502/1455|168/485||,A|coding_transcript_intron_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|4/4|c.433-40A>T|p.(%3D)|634/50324|433/519|145/173||,A|coding_transcript_intron_variant|LOW|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|3/3|c.484-40A>T|p.(%3D)|508/49941|484/570|162/190||;allele_of_genes="MGI:99918";alleles="MGI:5568206";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.74036370T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:5659152";strain_name="129/SvJ";symbol="Mecp2<sup>tm1.1Jtc</sup>";symbol_text="Mecp2<tm1.1Jtc>"
X 74036399 NC_000086.7:g.74036399G>A G A . . ANN=A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.524C>T|p.(T175M)|628/50403|524/1506|175/502||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.473C>T|p.(T158M)|731/59078|473/1455|158/485||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.473C>T|p.(T158M)|604/108536|473/1455|158/485||,A|coding_transcript_intron_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|4/4|c.432+41C>T|p.(%3D)|634/50324|433/519|145/173||,A|coding_transcript_intron_variant|LOW|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|3/3|c.483+41C>T|p.(%3D)|508/49941|484/570|162/190||;allele_of_genes="MGI:99918";alleles="MGI:5529361";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.74036399G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Mecp2<sup>tm4.1Bird</sup>";symbol_text="Mecp2<tm4.1Bird>"
X 74036475 NC_000086.7:g.74036475G>A G A . . ANN=A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|3/3|c.448C>T|p.(R150C)|552/50403|448/1506|150/502||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|4/4|c.397C>T|p.(R133C)|655/59078|397/1455|133/485||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|4/5|c.397C>T|p.(R133C)|598/50324|397/519|133/173||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|3/4|c.448C>T|p.(R150C)|472/49941|448/570|150/190||,A|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|4/4|c.397C>T|p.(R133C)|528/108536|397/1455|133/485||;allele_of_genes="MGI:99918";alleles="MGI:5702868";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.74036475G>A";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2164147";strain_name="129P2/OlaHsd";symbol="Mecp2<sup>tm6.1Bird</sup>";symbol_text="Mecp2<tm6.1Bird>"
X 74037121 NC_000086.7:g.74037121A>C A C . . ANN=C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|2/3|c.289T>G|p.(S97A)|393/50403|289/1506|97/502||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|3/4|c.238T>G|p.(S80A)|496/59078|238/1455|80/485||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|3/5|c.238T>G|p.(S80A)|439/50324|238/519|80/173||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|2/4|c.289T>G|p.(S97A)|313/49941|289/570|97/190||,C|missense_variant|MODERATE|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|3/4|c.238T>G|p.(S80A)|369/108536|238/1455|80/485||;allele_of_genes="MGI:99918";alleles="MGI:3840527";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.74037121A>C";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:4867032";strain_name="Not_Specified";symbol="Mecp2<sup>tm2.1Jae</sup>";symbol_text="Mecp2<tm2.1Jae>"
X 74085586 NC_000086.7:g.74085586T>A T A . . ANN=A|start_lost&missense_variant|HIGH|Mecp2|17257|transcript|ENSMUST00000033770.12|Coding|1/3|c.1A>T|p.0?|105/50403|1/1506|1/502||,A|start_lost&missense_variant|HIGH|Mecp2|17257|transcript|ENSMUST00000140399.2|Coding|1/4|c.1A>T|p.0?|25/49941|1/570|1/190||,A|5_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000100750.9|Coding|1/4|c.-175A>T|p.(%3D)|84/59078|1/1455|1/485||,A|5_prime_UTR_exon_variant|LOW|Mecp2|17257|transcript|ENSMUST00000123362.7|Coding|1/5|c.-175A>T|p.(%3D)|27/50324|1/519|1/173||,A|5_prime_UTR_intron_variant|LOW|Mecp2|17257|transcript|ENSMUST00000170481.8|Coding|1/3|c.-98-5554A>T|p.(%3D)|34/108536|1/1455|1/485||,A|non_coding_transcript_exon_variant|LOW|Mecp2|.|transcript|ENSMUST00000198358.1|Noncoding|1/1|n.12A>T||12/4563||||;allele_of_genes="MGI:99918";alleles="MGI:5584016";geneLevelConsequence="start_lost";hgvs_nomenclature="NC_000086.7:g.74085586T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159965";strain_name="C57BL/6N";symbol="Mecp2<sup>tm1.1Dhy</sup>";symbol_text="Mecp2<tm1.1Dhy>"
X 74428824 NC_000086.7:g.74428824T>A T A . . ANN=A|splice_region_variant&5_prime_UTR_exon_variant|LOW|G6pdx|14381|transcript|ENSMUST00000004327.10|Coding|1/13|c.-10A>T|p.(%3D)|371/19712|1/1548|1/516||,A|splice_region_variant&non_coding_transcript_exon_variant|LOW|G6pdx|14381|transcript|ENSMUST00000135894.1|Noncoding|1/5|n.26A>T||26/15046||||,A|splice_region_variant&5_prime_UTR_exon_variant|LOW|G6pdx|14381|transcript|ENSMUST00000143521.1|Coding|1/10|c.-10A>T|p.(%3D)|53/18018|1/1188|1/396||,A|splice_region_variant&non_coding_transcript_exon_variant|LOW|G6pdx|14381|transcript|ENSMUST00000155963.1|Noncoding|1/2|n.57A>T||57/1194||||,A|coding_transcript_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000004330.9|Coding|2/10|c.39+922T>A|p.(%3D)|246/29167|40/1293|14/431||,A|coding_transcript_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000138564.7|Coding|1/3|c.3+617T>A|p.(%3D)|307/9269|4/424|2/141||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000114128.7|Coding|2/10|c.-16+950T>A|p.(%3D)|226/24144|1/1239|1/413||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000114129.8|Coding|2/10|c.-16+922T>A|p.(%3D)|225/24474|1/1236|1/412||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000114133.8|Coding|2/10|c.-16+922T>A|p.(%3D)|246/29243|1/1239|1/413||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000130802.7|Coding|1/5|c.-15-3981T>A|p.(%3D)|80/46562|1/685|1/228||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000132749.1|Coding|2/2|c.-16+922T>A|p.(%3D)|215/8231|1/49|1/16||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000135165.7|Coding|1/5|c.-15-3981T>A|p.(%3D)|183/15417|1/747|1/249||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000144947.7|Coding|2/3|c.-16+950T>A|p.(%3D)|230/40704|1/378|1/126||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000164101.7|Coding|1/9|c.-15-3981T>A|p.(%3D)|116/60488|1/1239|1/413||,A|5_prime_UTR_intron_variant|LOW|Ikbkg|16151|transcript|ENSMUST00000180230.7|Coding|1/9|c.-15-3981T>A|p.(%3D)|116/60488|1/1236|1/412||;allele_of_genes="MGI:105979,MGI:105979";alleles="MGI:2182739,MGI:2182739";geneLevelConsequence="splice_region_variant,5_prime_UTR_variant,intron_variant";hgvs_nomenclature="NC_000086.7:g.74428824T>A";impact="LOW,MODIFIER";soTerm="point_mutation";strain_id="MGI:2160648";strain_name="102/El";symbol="G6pdx<sup>a-m1Neu</sup>";symbol_text="G6pdx<a-m1Neu>"
X 93288674 NC_000086.7:g.93288675_93288676del GCC G . . ANN=G|frameshift_truncation|HIGH|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.329_330del|p.(A110Gfs*61)|561/11862|329/1695|110/565||,G|frameshift_variant|HIGH|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.329_330del|p.(A110Gfs*61)|429/11553|329/1695|110/565||;allele_of_genes="MGI:1097716";alleles="MGI:4359177";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000086.7:g.93288675_93288676del";impact="HIGH";soTerm="deletion";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm4Kki</sup>";symbol_text="Arx<tm4Kki>"
X 93288675 NC_000086.7:g.93288675_93288675insGGCGGCGGCGGCGGCGGCGGCG C CGGCGGCGGCGGCGGCGGCGGCG . . ANN=CGGCGGCGGCGGCGGCGGCGGCG|frameshift_elongation|HIGH|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.329_330insGGCGGCGGCGGCGGCGGCGGCG|p.(T115Afs*64)|561/11862|329/1695|110/565||,CGGCGGCGGCGGCGGCGGCGGCG|frameshift_elongation|HIGH|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.329_330insGGCGGCGGCGGCGGCGGCGGCG|p.(T115Afs*64)|429/11553|329/1695|110/565||;allele_of_genes="MGI:1097716";alleles="MGI:4359177";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000086.7:g.93288675_93288675insGGCGGCGGCGGCGGCGGCGGCG";impact="HIGH";soTerm="insertion";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm4Kki</sup>";symbol_text="Arx<tm4Kki>"
X 93288781 NC_000086.7:g.93288782_93288783del CGT C . . ANN=C|frameshift_truncation|HIGH|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.437_438del|p.(V146Gfs*25)|669/11862|437/1695|146/565||INFO_REALIGN_3_PRIME,C|frameshift_variant|HIGH|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.437_438del|p.(V146Gfs*25)|537/11553|437/1695|146/565||INFO_REALIGN_3_PRIME;allele_of_genes="MGI:1097716";alleles="MGI:5559563";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000086.7:g.93288782_93288783del";impact="HIGH";soTerm="deletion";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm5Kki</sup>";symbol_text="Arx<tm5Kki>"
X 93288782 NC_000086.7:g.93288782_93288782insCGGCTGCCGCCGCTGCCGCTGCAGC G GCGGCTGCCGCCGCTGCCGCTGCAGC . . ANN=GCGGCTGCCGCCGCTGCCGCTGCAGC|frameshift_elongation|HIGH|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.436_437insCGGCTGCCGCCGCTGCCGCTGCAGC|p.(V146Afs*34)|668/11862|436/1695|146/565||,GCGGCTGCCGCCGCTGCCGCTGCAGC|frameshift_elongation|HIGH|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.436_437insCGGCTGCCGCCGCTGCCGCTGCAGC|p.(V146Afs*34)|536/11553|436/1695|146/565||;allele_of_genes="MGI:1097716";alleles="MGI:5559563";geneLevelConsequence="frameshift_variant";hgvs_nomenclature="NC_000086.7:g.93288782_93288782insCGGCTGCCGCCGCTGCCGCTGCAGC";impact="HIGH";soTerm="insertion";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm5Kki</sup>";symbol_text="Arx<tm5Kki>"
X 93289410 NC_000086.7:g.93289410C>G C G . . ANN=G|missense_variant|MODERATE|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.1064C>G|p.(P355R)|1296/11862|1064/1695|355/565||,G|missense_variant|MODERATE|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.1064C>G|p.(P355R)|1164/11553|1064/1695|355/565||;allele_of_genes="MGI:1097716";alleles="MGI:4359175";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.93289410C>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm2Kki</sup>";symbol_text="Arx<tm2Kki>"
X 93289410 NC_000086.7:g.93289410C>T C T . . ANN=T|missense_variant|MODERATE|Arx|11878|transcript|ENSMUST00000046565.12|Coding|2/5|c.1064C>T|p.(P355L)|1296/11862|1064/1695|355/565||,T|missense_variant|MODERATE|Arx|11878|transcript|ENSMUST00000113947.5|Coding|3/6|c.1064C>T|p.(P355L)|1164/11553|1064/1695|355/565||;allele_of_genes="MGI:1097716";alleles="MGI:4359176";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.93289410C>T";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3583440";strain_name="129S/SvEv-Gpi1<c>";symbol="Arx<sup>tm3Kki</sup>";symbol_text="Arx<tm3Kki>"
X 98940782 NC_000086.7:g.98940782T>A T A . . ANN=A|splice_region_variant&coding_transcript_intron_variant|LOW|Yipf6|77929|transcript|ENSMUST00000054697.6|Coding|3/6|c.266-5T>A|p.?|737/11257|266/711|89/237||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Yipf6|77929|transcript|ENSMUST00000113811.7|Coding|4/7|c.266-5T>A|p.?|342/8816|266/711|89/237||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Yipf6|77929|transcript|ENSMUST00000140479.1|Noncoding|3/5|n.291-5T>A||291/5829||||,A|splice_region_variant&non_coding_transcript_intron_variant|LOW|Yipf6|77929|transcript|ENSMUST00000149082.7|Noncoding|3/4|n.737-5T>A||737/7146||||,A|splice_region_variant&coding_transcript_intron_variant|LOW|Yipf6|77929|transcript|ENSMUST00000151353.7|Coding|4/6|c.266-5T>A|p.?|361/6363|266/595|89/198||;allele_of_genes="MGI:1925179";alleles="MGI:4839074";geneLevelConsequence="splice_region_variant,intron_variant";hgvs_nomenclature="NC_000086.7:g.98940782T>A";impact="LOW";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Yipf6<sup>M1Btlr</sup>";symbol_text="Yipf6<M1Btlr>"
X 110815364 NC_000086.7:g.110815364T>A T A . . ANN=A|stop_gained|HIGH|Pou3f4|18994|transcript|ENSMUST00000078229.4|Coding|1/1|c.900T>A|p.(C300*)|1085/2928|900/1086|300/362||;allele_of_genes="MGI:101894";alleles="MGI:4887839";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.110815364T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Pou3f4<sup>sdl</sup>";symbol_text="Pou3f4<sdl>"
X 157165613 NC_000086.7:g.157165613A>G A G . . ANN=G|missense_variant|MODERATE|Phex|.|transcript|ENSMUST00000135713.7|Coding|1/1|c.50T>C|p.(L17P)|50/3588|50/103|17/34||,G|missense_variant|MODERATE|Phex|18675|transcript|ENSMUST00000079945.10|Coding|22/22|c.2197T>C|p.(C733R)|2727/253212|2197/2250|733/750||;allele_of_genes="MGI:107489";alleles="MGI:5424921";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.157165613A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Phex<sup>Mhdabap024</sup>";symbol_text="Phex<Mhdabap024>"
X 157238453 NC_000086.7:g.157238453T>A T A . . ANN=A|stop_gained|HIGH|Phex|18675|transcript|ENSMUST00000079945.10|Coding|14/22|c.1486A>T|p.(K496*)|2016/253212|1486/2250|496/750||,A|stop_gained|HIGH|Phex|18675|transcript|ENSMUST00000138396.2|Coding|14/15|c.1486A>T|p.(K496*)|2042/194908|1486/1645|496/548||;allele_of_genes="MGI:107489";alleles="MGI:5489940";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.157238453T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:3037980";strain_name="129S1/SvImJ";symbol="Phex<sup>m1Jrt</sup>";symbol_text="Phex<m1Jrt>"
X 157350559 NC_000086.7:g.157350559A>G A G . . ANN=G|missense_variant|MODERATE|Phex|18675|transcript|ENSMUST00000079945.10|Coding|9/22|c.940T>C|p.(W314R)|1470/253212|940/2250|314/750||,G|missense_variant|MODERATE|Phex|18675|transcript|ENSMUST00000138396.2|Coding|9/15|c.940T>C|p.(W314R)|1496/194908|940/1645|314/548||;allele_of_genes="MGI:107489";alleles="MGI:5435304";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.157350559A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Phex<sup>Hpr</sup>";symbol_text="Phex<Hpr>"
X 157403477 NC_000086.7:g.157403477A>G A G . . ANN=G|missense_variant|MODERATE|Phex|18675|transcript|ENSMUST00000079945.10|Coding|3/22|c.239T>C|p.(F80S)|769/253212|239/2250|80/750||,G|missense_variant|MODERATE|Phex|18675|transcript|ENSMUST00000138396.2|Coding|3/15|c.239T>C|p.(F80S)|795/194908|239/1645|80/548||;allele_of_genes="MGI:107489";alleles="MGI:3797014";geneLevelConsequence="missense_variant";hgvs_nomenclature="NC_000086.7:g.157403477A>G";impact="MODERATE";soTerm="point_mutation";strain_id="MGI:3028467";strain_name="C57BL/6J";symbol="Phex<sup>Pug</sup>";symbol_text="Phex<Pug>"
X 157409976 NC_000086.7:g.157409976T>A T A . . ANN=A|stop_gained|HIGH|Phex|18675|transcript|ENSMUST00000079945.10|Coding|2/22|c.148A>T|p.(K50*)|678/253212|148/2250|50/750||,A|stop_gained|HIGH|Phex|18675|transcript|ENSMUST00000138396.2|Coding|2/15|c.148A>T|p.(K50*)|704/194908|148/1645|50/548||;allele_of_genes="MGI:107489";alleles="MGI:5424918";geneLevelConsequence="stop_gained";hgvs_nomenclature="NC_000086.7:g.157409976T>A";impact="HIGH";soTerm="point_mutation";strain_id="MGI:2159873";strain_name="C3HeB/FeJ";symbol="Phex<sup>Mhdabap012</sup>";symbol_text="Phex<Mhdabap012>"
MT 7731 NC_005089.1:g.7731G>A G A . . ANN=A|non_coding_transcript_exon_variant|LOW|mt-Tk|.|transcript|ENSMUST00000082406.1|Noncoding|1/1|n.32G>A||32/65||||;allele_of_genes=MGI:102483;alleles=MGI:5606283;hgvs_nomenclature=NC_005089.1:g.7731G>A;soTerm=point_mutation;strain_id=MGI:2159769;strain_name=C57BL/6;symbol=mt-Tk<sup>m1</sup>;symbol_text=mt-Tk<m1>
X 7592654 NC_000086.7:g.7592654T>A T A . . ANN=A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000045566.6|Coding|10/11|c.1049T>A|p.(I350N)|1131/8971|1049/1290|350/430||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000115738.7|Coding|12/13|c.1049T>A|p.(I350N)|1249/14752|1049/1290|350/430||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000115739.8|Coding|12/13|c.1049T>A|p.(I350N)|1331/15566|1049/1290|350/430||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000115740.8|Coding|13/14|c.1049T>A|p.(I350N)|1391/15570|1049/1290|350/430||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000234015.1|Coding|9/10|c.968T>A|p.(I323N)|968/6694|968/1209|323/403||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000234363.1|Coding|11/12|c.1049T>A|p.(I350N)|1229/14233|1049/1290|350/430||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000234479.1|Coding|11/12|c.972T>A|p.(H324Q)|1254/13437|972/1008|324/336||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000234574.1|Coding|10/11|c.944T>A|p.(I315N)|1015/13589|944/1185|315/395||,A|missense_variant|MODERATE|Foxp3|20371|transcript|ENSMUST00000235116.1|Coding|11/12|c.1049T>A|p.(I350N)|1248/13437|1049/1290|350/430||,A|non_coding_transcript_intron_variant|LOW|Gm36995|54646|transcript|ENSMUST00000126170.3|Noncoding|14/16|n.3312+1372A>T||3313/46780||||;allele_of_genes=MGI:1891436;alleles=MGI:3817855;geneLevelConsequence=missense_variant;hgvs_nomenclature=NC_000086.7:g.7592654T>A;impact=MODERATE;soTerm=point_mutation;strain_id=MGI:3028467;strain_name=C57BL/6J;symbol=Foxp3<sup>m1Btlr</sup>;symbol_text=Foxp3<m1Btlr>