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util.js
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var crypto = require("crypto");
var request = require("request");
var fs = require("fs");
var path = require("path");
var reqq = require("sync-request")
var sleep = require('system-sleep');
let journals = []
let data = []
var name = []
let count;
module.exports = {
randomString: function(howMany, chars) {
chars = chars || "abcdefghijklmnopqrstuwxyzABCDEFGHIJKLMNOPQRSTUWXYZ0123456789";
var rnd = crypto.randomBytes(howMany),
value = new Array(howMany),
len = chars.length;
for (var i = 0; i < howMany; i++) {
value[i] = chars[rnd[i] % len];
}
return value.join('');
},
jsonToCsv: function(json_data) {
var data = json_data.results[0];
//console.log("data:" data);
var csv = "";
csv += data.columns.join(',') + '\n';
//console.log(data.data.length);
for (var i = 0; i < data.data.length; i++) {
//console.log(data.data[i].row);
csv += '"' + data.data[i].row.join('","') + '"\n';
}
return csv;
},
generateJournalList: function(callback) {
var NEO4J_API_URL = "http://pesitsouthscibase.org:7474/db/data/transaction/commit";
var NEO4J_USER = "neo4j";
var NEO4J_PASS = "scibase";
var query = "MATCH (j:Journal) RETURN j.Name as Name";
// console.log(return_param);
var request_json = {
"statements": [
{
"statement": query
}
]
};
var auth_payload = new Buffer(NEO4J_USER + ":" + NEO4J_PASS).toString('base64');
var res = request({
url: NEO4J_API_URL,
method: "POST",
json: request_json,
headers: {
"Authorization": "Basic " + auth_payload,
"Accept": "application/json; charset=UTF-8"
}
}, function(err, response, body) {
if (!err && response.statusCode === 200) {
//var file_name_base = util.randomString(20);
//console.log(JSON.stringify(response_body));
try {
data = body.results[0]
fs.writeFileSync(path.join(__dirname, "public/files/graphcsv/", "Journals.csv"), module.exports.jsonToCsv(body), 'utf-8');
for (var i = 0; i < data.data.length; i++) {
journal = ""
//console.log(data.data[i].row[0]);
journal = data.data[i].row[0].toString();
journals.push(journal);
console.log(journals)
}
console.log("Callback before")
console.log("Callback after")
} catch (e) {
console.log("Error:", e.message);
}
} else {
console.log("Unable to generate Journal.csv !");
}
callback(journals.sort())
});
},
generateArticleCitvsYearCsv: function(i) {
var data1;
var NEO4J_API_URL = "http://pesitsouthscibase.org:7474/db/data/transaction/commit";
var NEO4J_USER = "neo4j";
var NEO4J_PASS = "scibase";
base_query_1 = "MATCH p=(j:Journal)-[c:CONTAINS]->(a:Article)where j.Name = '"
base_query_2 = "'optional match q=(j:Journal)-[c:CONTAINS]->(a:Article)-[:CITED_BY]-() return j.Name as Name,a.Year as Year,a.Month as Month,count(distinct p)as ArticleCount,count(q)as CitationCount order by j.Name, a.Year, a.Month "
var query = base_query_1 + i + base_query_2;
kk = i + ".csv"
var request_json = {
"statements": [
{
"statement": query
}
]
};
var auth_payload = new Buffer(NEO4J_USER + ":" + NEO4J_PASS).toString('base64');
console.log("fetching : %s", i)
var res = request({
url: NEO4J_API_URL,
method: "POST",
json: request_json,
headers: {
"Authorization": "Basic " + auth_payload,
"Accept": "application/json; charset=UTF-8"
}
}, function(err, response, body) {
data[i] = body;
name[i] = kk;
count = count + 1;
console.log(count)
});
},
writetoCSV: function() {
console.log("writing")
console.log(data)
console.log(count)
for (i = 0; i < count; i++) {
console.log("writing: %s", name[i])
fs.writeFileSync(path.join(__dirname, "public/files/graphcsv/", name[i]), module.exports.jsonToCsv(data[i]), 'utf-8');
}
},
//fs.writeFileSync(path.join(__dirname, "public/files/graphcsv/", kk), module.exports.jsonToCsv(body), 'utf-8');
generateAllArticleCitvsYearCsv: function() {
var NEO4J_API_URL = "http://pesitsouthscibase.org:7474/db/data/transaction/commit";
var NEO4J_USER = "neo4j";
var NEO4J_PASS = "scibase";
var query = "MATCH p=(j:Journal)-[c:CONTAINS]->(a:Article) optional match q=(j:Journal)-[c:CONTAINS]->(a:Article)-[:CITED_BY]-() return j.Name as Name,a.Year as Year,a.Month as Month,count(distinct p)as ArticleCount,count(q)as CitationCount order by j.Name, a.Year, a.Month";
console.log("fetching");
var request_json = {
"statements": [
{
"statement": query
}
]
};
var auth_payload = new Buffer(NEO4J_USER + ":" + NEO4J_PASS).toString('base64');
var res = request({
url: NEO4J_API_URL,
method: "POST",
json: request_json,
headers: {
"Authorization": "Basic " + auth_payload,
"Accept": "application/json; charset=UTF-8"
}
}, function(err, response, body) {
if (!err && response.statusCode === 200) {
//var file_name_base = util.randomString(20);
//console.log(JSON.stringify(response_body));
try {
fs.writeFileSync(path.join(__dirname, "public/files/graphcsv/", "generateAllArticleCitvsYear.csv"), module.exports.jsonToCsv(body), 'utf-8');
//fs.writeFileSync("/files/papers/Journal.csv",module.exports.jsonToCsv(body), 'utf-8');
} catch (e) {
console.log("Error:", e.message);
}
} else {
console.log("Unable to generate Journal.csv !");
}
});
}
};