publish-ectd-bundle.yaml

on:
  workflow_dispatch:
  push:
    branches:
      - main

name: Publish ECTD bundle

jobs:
  build-deploy:
    runs-on: ubuntu-latest
    permissions:
      contents: write
      pages: write
      id-token: write
    steps:
      - name: Check out repository
        uses: actions/checkout@v4

      - name: Install R
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: '4.2.3'

      - name: Install R Dependencies
        uses: r-lib/actions/setup-renv@v2
        with:
          cache-version: 1

      - name: Compile ECTD Bundle (custom)
        run: |
          source("utils.R"); create_ectd_bundle()
        shell: Rscript {0}

      - name: Push ECTD bundle to custom repository
        uses: nkoppel/push-files-to-another-repository@1.1.0
        env:
          API_TOKEN_GITHUB: ${{ secrets.API_TOKEN_GITHUB }}
        with:
          source-files: 'ectd_bundle/r4app.zip'
          destination-username: 'RConsortium'
          destination-repository: 'submissions-pilot4-webR-to-fda'
          destination-directory: 'm5/datasets/rconsortiumpilot4webR/analysis/adam/programs'