diff --git a/.github/assets/demo/demo-dark.tape b/.github/assets/demo/demo-dark.tape
index ee5b233..25c89bc 100644
--- a/.github/assets/demo/demo-dark.tape
+++ b/.github/assets/demo/demo-dark.tape
@@ -8,7 +8,7 @@ Set Width 1920
 Set Height 750
 
 Hide
-Type "cd tests/test_end_to_end/test_default_use_case" Enter
+Type "cd tests/test_default_use_case" Enter
 Type "clear" Enter
 
 Show
diff --git a/.github/assets/demo/demo-light.tape b/.github/assets/demo/demo-light.tape
index f5a1898..c1da753 100644
--- a/.github/assets/demo/demo-light.tape
+++ b/.github/assets/demo/demo-light.tape
@@ -8,7 +8,7 @@ Set Width 2020
 Set Height 750
 
 Hide
-Type "cd tests/test_end_to_end/test_default_use_case" Enter
+Type "cd tests/test_default_use_case" Enter
 Type "clear" Enter
 
 Show
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 808cbe8..60f5b08 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -36,4 +36,4 @@ jobs:
       - uses: actions/checkout@v4
       - uses: Swatinem/rust-cache@f0deed1e0edfc6a9be95417288c0e1099b1eeec3
       - name: Run Clippy
-        run: cargo clippy --all-targets --all-features -- -D clippy::all
+        run: cargo clippy --all-targets --all-features -- -D clippy::all -A clippy::too_many_arguments
diff --git a/Cargo.lock b/Cargo.lock
index c8f9e36..41bbdde 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -1,6 +1,6 @@
 # This file is automatically @generated by Cargo.
 # It is not intended for manual editing.
-version = 3
+version = 4
 
 [[package]]
 name = "addr2line"
@@ -328,7 +328,7 @@ dependencies = [
 
 [[package]]
 name = "conda-deny"
-version = "0.3.3"
+version = "0.3.4"
 dependencies = [
  "anyhow",
  "assert_cmd",
@@ -349,6 +349,7 @@ dependencies = [
  "serde_yaml",
  "serial_test",
  "spdx",
+ "tempfile",
  "tokio",
  "toml",
 ]
@@ -524,12 +525,12 @@ dependencies = [
 
 [[package]]
 name = "errno"
-version = "0.3.9"
+version = "0.3.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "534c5cf6194dfab3db3242765c03bbe257cf92f22b38f6bc0c58d59108a820ba"
+checksum = "33d852cb9b869c2a9b3df2f71a3074817f01e1844f839a144f5fcef059a4eb5d"
 dependencies = [
  "libc",
- "windows-sys 0.52.0",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -723,10 +724,22 @@ dependencies = [
  "cfg-if",
  "js-sys",
  "libc",
- "wasi",
+ "wasi 0.11.0+wasi-snapshot-preview1",
  "wasm-bindgen",
 ]
 
+[[package]]
+name = "getrandom"
+version = "0.3.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "43a49c392881ce6d5c3b8cb70f98717b7c07aabbdff06687b9030dbfbe2725f8"
+dependencies = [
+ "cfg-if",
+ "libc",
+ "wasi 0.13.3+wasi-0.2.2",
+ "windows-targets 0.52.6",
+]
+
 [[package]]
 name = "gimli"
 version = "0.31.1"
@@ -1131,7 +1144,7 @@ checksum = "80e04d1dcff3aae0704555fe5fee3bcfaf3d1fdf8a7e521d5b9d2b42acb52cec"
 dependencies = [
  "hermit-abi",
  "libc",
- "wasi",
+ "wasi 0.11.0+wasi-snapshot-preview1",
  "windows-sys 0.52.0",
 ]
 
@@ -1545,7 +1558,7 @@ version = "0.6.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ec0be4795e2f6a28069bec0b5ff3e2ac9bafc99e6a9a7dc3547996c5c816922c"
 dependencies = [
- "getrandom",
+ "getrandom 0.2.15",
 ]
 
 [[package]]
@@ -1659,7 +1672,7 @@ version = "0.4.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ba009ff324d1fc1b900bd1fdb31564febe58a8ccc8a6fdbb93b543d33b13ca43"
 dependencies = [
- "getrandom",
+ "getrandom 0.2.15",
  "libredox",
  "thiserror",
 ]
@@ -1775,7 +1788,7 @@ checksum = "c17fa4cb658e3583423e915b9f3acc01cceaee1860e33d59ebae66adc3a2dc0d"
 dependencies = [
  "cc",
  "cfg-if",
- "getrandom",
+ "getrandom 0.2.15",
  "libc",
  "spin",
  "untrusted",
@@ -1835,15 +1848,15 @@ dependencies = [
 
 [[package]]
 name = "rustix"
-version = "0.38.37"
+version = "0.38.44"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8acb788b847c24f28525660c4d7758620a7210875711f79e7f663cc152726811"
+checksum = "fdb5bc1ae2baa591800df16c9ca78619bf65c0488b41b96ccec5d11220d8c154"
 dependencies = [
  "bitflags",
  "errno",
  "libc",
  "linux-raw-sys",
- "windows-sys 0.52.0",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -2155,7 +2168,7 @@ version = "0.14.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "aa2bcf6c6e164e81bc7a5d49fc6988b3d515d9e8c07457d7b74ffb9324b9cd40"
 dependencies = [
- "getrandom",
+ "getrandom 0.2.15",
  "halfbrown",
  "ref-cast",
  "serde",
@@ -2292,12 +2305,13 @@ dependencies = [
 
 [[package]]
 name = "tempfile"
-version = "3.13.0"
+version = "3.16.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f0f2c9fc62d0beef6951ccffd757e241266a2c833136efbe35af6cd2567dca5b"
+checksum = "38c246215d7d24f48ae091a2902398798e05d978b24315d6efbc00ede9a8bb91"
 dependencies = [
  "cfg-if",
  "fastrand",
+ "getrandom 0.3.1",
  "once_cell",
  "rustix",
  "windows-sys 0.59.0",
@@ -2689,6 +2703,15 @@ version = "0.11.0+wasi-snapshot-preview1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"
 
+[[package]]
+name = "wasi"
+version = "0.13.3+wasi-0.2.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "26816d2e1a4a36a2940b96c5296ce403917633dff8f3440e9b236ed6f6bacad2"
+dependencies = [
+ "wit-bindgen-rt",
+]
+
 [[package]]
 name = "wasm-bindgen"
 version = "0.2.93"
@@ -2971,6 +2994,15 @@ dependencies = [
  "memchr",
 ]
 
+[[package]]
+name = "wit-bindgen-rt"
+version = "0.33.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "3268f3d866458b787f390cf61f4bbb563b922d091359f9608842999eaee3943c"
+dependencies = [
+ "bitflags",
+]
+
 [[package]]
 name = "zerocopy"
 version = "0.7.35"
diff --git a/Cargo.toml b/Cargo.toml
index 1ae2dae..172b16d 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -1,7 +1,7 @@
 [package]
 name = "conda-deny"
 description = "A CLI tool to check your project's dependencies for license compliance."
-version = "0.3.3"
+version = "0.3.4"
 edition = "2021"
 
 [features]
@@ -35,6 +35,7 @@ anyhow = "1.0.95"
 clap-verbosity-flag = "3.0.2"
 env_logger = "0.11.6"
 log = "0.4.25"
+tempfile = "3.16.0"
 
 [dev-dependencies]
 assert_cmd = "2.0.14"
diff --git a/src/cli.rs b/src/cli.rs
index f832149..c1cc962 100644
--- a/src/cli.rs
+++ b/src/cli.rs
@@ -22,6 +22,7 @@ pub struct Cli {
 
 #[derive(clap::Subcommand, Debug)]
 pub enum CondaDenyCliConfig {
+    /// Check licenses of pixi or conda environment against a whitelist
     Check {
         /// Path to the pixi lockfile(s)
         #[arg(short, long)]
@@ -47,6 +48,7 @@ pub enum CondaDenyCliConfig {
         #[arg(long, action = ArgAction::SetTrue)]
         ignore_pypi: Option<bool>,
     },
+    /// List all packages and their licenses in your conda or pixi environment
     List {
         /// Path to the pixi lockfile(s)
         #[arg(short, long)]
diff --git a/src/conda_deny_config.rs b/src/conda_deny_config.rs
index 9ab2f5b..5f762bc 100644
--- a/src/conda_deny_config.rs
+++ b/src/conda_deny_config.rs
@@ -149,74 +149,3 @@ impl CondaDenyTomlConfig {
         }
     }
 }
-
-#[cfg(test)]
-mod tests {
-    use std::vec;
-
-    use rstest::{fixture, rstest};
-
-    use super::*;
-
-    #[fixture]
-    fn test_files() -> PathBuf {
-        PathBuf::from("tests/test_pyproject_toml_files/")
-    }
-
-    #[rstest]
-    fn test_valid_config_multiple_urls(test_files: PathBuf) {
-        let test_file_path = test_files.join("valid_config_multiple_urls.toml");
-        let config = CondaDenyTomlConfig::from_path(test_file_path).unwrap();
-
-        let license_config_paths = config.get_license_whitelists();
-        assert_eq!(
-            &license_config_paths,
-            &vec![
-                "https://example.org/conda-deny/base_config1.toml".to_string(),
-                "https://example.org/conda-deny/base_config2.toml".to_string()
-            ]
-        );
-    }
-
-    #[rstest]
-    fn test_missing_optional_fields(test_files: PathBuf) {
-        let test_file_path = test_files.join("missing_optional_fields.toml");
-        let config = CondaDenyTomlConfig::from_path(test_file_path).unwrap();
-
-        let license_config_paths = config.get_license_whitelists();
-        assert_eq!(
-            license_config_paths,
-            vec!("https://example.org/conda-deny/base_config.toml")
-        );
-    }
-
-    #[rstest]
-    fn test_invalid_toml(test_files: PathBuf) {
-        let test_file_path = test_files.join("invalid.toml");
-        let result = CondaDenyTomlConfig::from_path(test_file_path);
-
-        assert!(result.is_err());
-    }
-
-    #[rstest]
-    fn test_get_license_config_paths(test_files: PathBuf) {
-        let test_file_path = test_files.join("valid_config_single_url.toml");
-        let config = CondaDenyTomlConfig::from_path(test_file_path).unwrap();
-
-        assert_eq!(
-            config.get_license_whitelists(),
-            vec!["https://example.org/conda-deny/base_config.toml".to_string()]
-        );
-
-        let test_file_path = test_files.join("valid_config_multiple_urls.toml");
-        let config = CondaDenyTomlConfig::from_path(test_file_path).unwrap();
-
-        assert_eq!(
-            config.get_license_whitelists(),
-            vec![
-                "https://example.org/conda-deny/base_config1.toml".to_string(),
-                "https://example.org/conda-deny/base_config2.toml".to_string()
-            ]
-        );
-    }
-}
diff --git a/src/conda_meta_entry.rs b/src/conda_meta_entry.rs
index 8f47fb4..9d13d68 100644
--- a/src/conda_meta_entry.rs
+++ b/src/conda_meta_entry.rs
@@ -63,6 +63,7 @@ impl CondaMetaEntry {
     }
 }
 
+// TODO: Use rattler struct: PrefixRecord
 pub struct CondaMetaEntries {
     pub entries: Vec<CondaMetaEntry>,
 }
diff --git a/src/license_whitelist.rs b/src/license_whitelist.rs
index 77161ba..eaad9da 100644
--- a/src/license_whitelist.rs
+++ b/src/license_whitelist.rs
@@ -234,6 +234,8 @@ pub fn get_license_information_from_toml_config(
 
     let license_whitelist_urls = toml_config.get_license_whitelists().clone();
     let (safe_licenses, ignore_packages) = build_license_whitelist(&license_whitelist_urls)?;
+
+    // TODO: Remove duplicates
     let safe_licenses = safe_licenses_from_toml
         .iter()
         .map(|license_str| parse_expression(license_str))
@@ -241,6 +243,8 @@ pub fn get_license_information_from_toml_config(
         .into_iter()
         .chain(safe_licenses)
         .collect::<Vec<_>>();
+
+    // TODO: Remove duplicates
     let ignore_packages = ignore_packages_from_toml
         .iter()
         .cloned()
@@ -251,15 +255,17 @@ pub fn get_license_information_from_toml_config(
 
 #[cfg(test)]
 mod tests {
+    use tempfile::NamedTempFile;
+
     use crate::conda_deny_config::CondaDenyTomlConfig;
 
     use super::*;
-    use std::error::Error;
+    use std::{error::Error, io::Write};
 
     #[test]
     fn test_fetch_safe_licenses_success() {
         let reader = RealRemoteConfigReader;
-        let (safe_licenses, ignore_packages) = fetch_safe_licenses("https://raw.githubusercontent.com/quantco/conda-deny/main/tests/test_remote_base_configs/conda-deny-license_whitelist.toml", &reader)
+        let (safe_licenses, ignore_packages) = fetch_safe_licenses("https://raw.githubusercontent.com/quantco/conda-deny/main/tests/default_license_whitelist.toml", &reader)
             .unwrap();
 
         // Assert the result
@@ -271,58 +277,47 @@ mod tests {
 
     #[test]
     fn test_valid_remote_base_config() {
-        let (safe_licenses, ignored_packages) =
-            license_config_from_toml_str("tests/test_remote_base_configs/valid_config.toml")
-                .unwrap();
-        assert_eq!(safe_licenses.len(), 2);
-        assert_eq!(ignored_packages.len(), 1);
-    }
+        // Create a temporary file for the pixi.toml
+        let mut temp_config_file = NamedTempFile::new().unwrap();
+        let file_content = r#"[tool.conda-deny]
+license-whitelist = "tests/default_license_whitelist.toml"
+safe-licenses = [
+    # Licenses by their SPDX identifier, see https://spdx.org/licenses/
+    "MIT",
+    "PSF-2.0",
+]
+ignore-packages = [
+    {package="make"},
+]"#;
+        temp_config_file
+            .as_file_mut()
+            .write_all(file_content.as_bytes())
+            .unwrap();
 
-    #[test]
-    fn test_invalid_remote_base_config() {
-        let result =
-            license_config_from_toml_str("tests/test_remote_base_configs/invalid_config.toml");
-        assert!(result.is_err());
-    }
+        let temp_config_path = temp_config_file.path().to_str().unwrap();
 
-    #[test]
-    fn test_different_versions_in_remote_base_config() {
-        let (safe_licenses, ignored_packages) = license_config_from_toml_str(
-            "tests/test_remote_base_configs/version_test_config.toml",
-        )
-        .unwrap();
+        let (safe_licenses, ignored_packages) =
+            license_config_from_toml_str(temp_config_path).unwrap();
         assert_eq!(safe_licenses.len(), 2);
-        assert_eq!(ignored_packages.len(), 3);
-
-        assert!(ignored_packages
-            .iter()
-            .any(|x| x.package == "package1" && x.version == Some("=4.2.1".to_string())));
-        assert!(ignored_packages
-            .iter()
-            .any(|x| x.package == "package2" && x.version == Some("<=4.2.1".to_string())));
-        assert!(ignored_packages
-            .iter()
-            .any(|x| x.package == "package3" && x.version == Some(">4.2.1".to_string())));
-    }
-
-    #[test]
-    fn test_semver_matching() {
-        let version1 = Version::from_str("4.2.1").unwrap();
-        let version2 = Version::from_str("4.2.2").unwrap();
-        let version3 = Version::from_str("4.2.0").unwrap();
-        let version_req = VersionSpec::from_str("=4.2.1", ParseStrictness::Strict).unwrap();
-
-        assert!(version_req.matches(&version1));
-        assert!(!version_req.matches(&version2));
-        assert!(!version_req.matches(&version3));
+        assert_eq!(ignored_packages.len(), 1);
     }
 
     #[test]
     fn test_is_package_ignored() {
-        let (_, ignored_packages) = license_config_from_toml_str(
-            "tests/test_remote_base_configs/version_test_config.toml",
-        )
-        .unwrap();
+        let ignored_packages = vec![
+            IgnorePackage {
+                package: "package1".to_string(),
+                version: Some("=4.2.1".to_string()),
+            },
+            IgnorePackage {
+                package: "package2".to_string(),
+                version: Some("<=4.2.1".to_string()),
+            },
+            IgnorePackage {
+                package: "package3".to_string(),
+                version: Some(">4.2.1".to_string()),
+            },
+        ];
         assert!(is_package_ignored(&ignored_packages, "package1", "4.2.1").unwrap());
         assert!(!is_package_ignored(&ignored_packages, "package1", "4.3.0").unwrap());
         assert!(!is_package_ignored(&ignored_packages, "package1", "4.3.2").unwrap());
@@ -344,13 +339,29 @@ mod tests {
 
     #[test]
     fn test_get_safe_licenses_local() {
-        let toml_config = CondaDenyTomlConfig::from_path(
-            "tests/test_remote_base_configs/valid_config.toml".into(),
-        )
-        .unwrap();
+        // Create a temporary file for the pixi.toml
+        let mut temp_config_file = NamedTempFile::new().unwrap();
+        let file_content = r#"[tool.conda-deny]
+        license-whitelist = "tests/default_license_whitelist.toml"
+        safe-licenses = [
+            # Licenses by their SPDX identifier, see https://spdx.org/licenses/
+            "MIT",
+            "PSF-2.0",
+        ]
+        ignore-packages = [
+            {package="make"},
+        ]"#;
+        temp_config_file
+            .as_file_mut()
+            .write_all(file_content.as_bytes())
+            .unwrap();
+
+        let temp_config_path = temp_config_file.path().to_str().unwrap();
+
+        let toml_config = CondaDenyTomlConfig::from_path(temp_config_path.into()).unwrap();
         let (safe_licenses, ignored_packages) =
             get_license_information_from_toml_config(&toml_config).unwrap();
-        assert_eq!(safe_licenses.len(), 5);
+        assert_eq!(safe_licenses.len(), 7);
         assert_eq!(
             safe_licenses,
             vec![
@@ -358,7 +369,10 @@ mod tests {
                 parse_expression("PSF-2.0").unwrap(),
                 parse_expression("Apache-2.0").unwrap(),
                 parse_expression("Unlicense").unwrap(),
-                parse_expression("WTFPL").unwrap()
+                parse_expression("WTFPL").unwrap(),
+                // Currently, duplicates are still possible
+                parse_expression("MIT").unwrap(),
+                parse_expression("PSF-2.0").unwrap(),
             ]
         );
         assert_eq!(ignored_packages.len(), 2);
diff --git a/src/pixi_lock.rs b/src/pixi_lock.rs
index bd395e4..1fe0e5d 100644
--- a/src/pixi_lock.rs
+++ b/src/pixi_lock.rs
@@ -78,17 +78,9 @@ mod tests {
 
     use super::*;
 
-    #[test]
-    fn test_pixi_lock_read_out() {
-        let lock_file =
-            LockFile::from_path(Path::new("tests/test_pixi_lock_files/valid1_pixi.lock")).unwrap();
-        let environment_names = _get_environment_names(&lock_file);
-        assert_eq!(environment_names, vec!["default", "demo", "lint"]);
-    }
-
     #[test]
     fn test_get_packages_for_pixi_lock() {
-        let path = Path::new("tests/test_pixi_lock_files/valid1_pixi.lock");
+        let path = Path::new("tests/default_pixi.lock");
         let package_records = get_conda_packages_for_pixi_lock(path, &None, &None, false);
         assert_eq!(package_records.unwrap().len(), 758);
 
diff --git a/tests/default_license_whitelist.toml b/tests/default_license_whitelist.toml
index 78026c7..a8ac667 100644
--- a/tests/default_license_whitelist.toml
+++ b/tests/default_license_whitelist.toml
@@ -4,6 +4,7 @@ safe-licenses = [
     "Unlicense",
     "WTFPL",
     "MIT",
+    "PSF-2.0",
 ]
 ignore-packages = [
     {package="_libgcc_mutex"}
diff --git a/tests/test_config_setups/test_empty_config/pixi.lock b/tests/default_pixi.lock
similarity index 100%
rename from tests/test_config_setups/test_empty_config/pixi.lock
rename to tests/default_pixi.lock
diff --git a/tests/integration_tests.rs b/tests/integration_tests.rs
index da26563..1c4b8ae 100644
--- a/tests/integration_tests.rs
+++ b/tests/integration_tests.rs
@@ -6,8 +6,10 @@ use conda_deny::{
 };
 use rattler_conda_types::Platform;
 use rstest::{fixture, rstest};
+use std::io::Write;
 use std::path::{Path, PathBuf};
 use std::process::Command;
+use tempfile::NamedTempFile;
 
 #[fixture]
 fn list_config(
@@ -62,11 +64,6 @@ fn check_config(
     }
 }
 
-#[fixture]
-fn change_directory(#[default(PathBuf::from("examples/simple-python"))] path: PathBuf) {
-    std::env::set_current_dir(path).unwrap();
-}
-
 #[fixture]
 fn out() -> Vec<u8> {
     Vec::new()
@@ -78,62 +75,199 @@ fn out() -> Vec<u8> {
 #[case("check", "test_default_use_case_pyproject")]
 #[case("list", "test_default_use_case_pyproject")]
 fn test_default_use_case(#[case] subcommand: &str, #[case] test_name: &str) {
-    let path_string = format!("tests/test_end_to_end/{}", test_name);
+    use core::str;
+
+    let path_string = format!("tests/{}", test_name);
     let test_dir = Path::new(path_string.as_str());
 
-    let mut command = Command::cargo_bin("conda-deny").unwrap();
-    command.arg(subcommand).current_dir(test_dir);
+    let output = Command::cargo_bin("conda-deny")
+        .unwrap()
+        .arg(subcommand)
+        .current_dir(test_dir)
+        .env("CLICOLOR_FORCE", "1")
+        .output()
+        .expect("Failed to execute command");
+
+    let stdout = str::from_utf8(&output.stdout).unwrap();
     if subcommand == "check" {
-        command.assert().failure();
+        assert!(stdout.contains("There were \u{1b}[32m242\u{1b}[0m safe licenses and \u{1b}[31m300\u{1b}[0m unsafe licenses."));
+        output.assert().failure();
     } else {
-        command.assert().success();
+        assert!(stdout.contains("\u{1b}[34mzstandard\u{1b}[0m \u{1b}[36m0.22.0\u{1b}[0m-\u{1b}[3;96mpy312h721a963_1\u{1b}[0m (\u{1b}[95mosx-arm64\u{1b}[0m): \u{1b}[33mBSD-3-Clause"));
+        assert!(stdout.contains("\u{1b}[34mzlib\u{1b}[0m \u{1b}[36m1.3.1\u{1b}[0m-\u{1b}[3;96mh4ab18f5_1\u{1b}[0m (\u{1b}[95mlinux-64\u{1b}[0m): \u{1b}[33mZlib"));
+        assert!(stdout.contains("\u{1b}[34mxz\u{1b}[0m \u{1b}[36m5.2.6\u{1b}[0m-\u{1b}[3;96mh166bdaf_0\u{1b}[0m (\u{1b}[95mlinux-64\u{1b}[0m): \u{1b}[33mLGPL-2.1 and GPL-2.0"));
+        output.assert().success();
     }
 }
 
-#[rstest]
-fn test_remote_whitelist_check(
-    #[with(Some(PathBuf::from("tests/test_end_to_end/test_remote_whitelist/pixi.toml")), Some(vec!["tests/test_end_to_end/test_remote_whitelist/pixi.lock".into()]))]
-    check_config: CondaDenyCheckConfig,
-    mut out: Vec<u8>,
-) {
+#[test]
+fn test_remote_whitelist_check() {
+    // Create a temporary file for the license_whitelist.toml
+    let mut temp_config_file = NamedTempFile::new().unwrap();
+    let file_content = r#"[tool.conda-deny]
+license-whitelist = "https://raw.githubusercontent.com/Quantco/conda-deny/refs/heads/main/tests/default_license_whitelist.toml""#;
+
+    temp_config_file
+        .as_file_mut()
+        .write_all(file_content.as_bytes())
+        .unwrap();
+
+    let temp_config_file_path = temp_config_file.path().to_path_buf();
+
+    let mut out = out();
+    let check_config = check_config(
+        Some(temp_config_file_path),
+        Some(vec!["tests/default_pixi.lock".into()]),
+        None,
+        None,
+        None,
+        None,
+        None,
+    );
+
     let result = check(check_config, &mut out);
+    let output = String::from_utf8(out).unwrap();
+
+    assert!(output.contains(
+        "There were \u{1b}[32m242\u{1b}[0m safe licenses and \u{1b}[31m300\u{1b}[0m unsafe licenses."
+    ));
     assert!(result.is_err());
 }
 
-#[rstest]
-fn test_multiple_whitelists_check(
-    #[with(
-        Some(PathBuf::from("tests/test_end_to_end/test_multiple_whitelists/pixi.toml")),
-        Some(vec!["tests/test_end_to_end/test_multiple_whitelists/pixi.lock".into()])
-    )]
-    check_config: CondaDenyCheckConfig,
-    mut out: Vec<u8>,
-) {
+#[test]
+fn test_multiple_whitelists_check() {
+    // Create a temporary file for the license_whitelist.toml
+    let mut temp_license_whitelist = NamedTempFile::new().unwrap();
+    let file_content = r#"[tool.conda-deny]
+                                safe-licenses = ["BSD-3-Clause"]"#;
+    temp_license_whitelist
+        .as_file_mut()
+        .write_all(file_content.as_bytes())
+        .unwrap();
+
+    let temp_whitelist_path = temp_license_whitelist.path().to_path_buf();
+
+    // Create a temporary file for pixi.toml
+    let mut temp_pixi_toml = NamedTempFile::new().unwrap();
+    let file_content = "[tool.conda-deny]
+        license-whitelist = [
+        \"https://raw.githubusercontent.com/Quantco/conda-deny/refs/heads/main/tests/default_license_whitelist.toml\",
+        \"".to_string() + temp_whitelist_path.to_str().unwrap() + "\"]";
+
+    temp_pixi_toml
+        .as_file_mut()
+        .write_all(file_content.as_bytes())
+        .unwrap();
+
+    let mut out = out();
+    // Inject the temporary file's path into check_config
+    let temp_path = Some(temp_pixi_toml.path().to_path_buf());
+    let check_config = check_config(
+        temp_path,
+        Some(vec!["tests/default_pixi.lock".into()]),
+        None,
+        None,
+        None,
+        None,
+        None,
+    );
+
     let result = check(check_config, &mut out);
+    let output = String::from_utf8(out).unwrap();
+
+    assert!(output.contains(
+        "There were \u{1b}[32m344\u{1b}[0m safe licenses and \u{1b}[31m198\u{1b}[0m unsafe licenses."
+    ));
     assert!(result.is_err());
 }
 
-#[rstest]
-fn test_config_with_platform_and_env(
-    #[with(
-        Some(PathBuf::from("tests/test_end_to_end/test_platform_env_spec/pixi.toml")),
-        Some(vec!["tests/test_end_to_end/test_platform_env_spec/pixi.lock".into()])
-    )]
-    check_config: CondaDenyCheckConfig,
-    mut out: Vec<u8>,
-) {
+#[test]
+fn test_platform_env_restrictions_check() {
+    // Create a temporary file for pixi.toml
+    let mut temp_pixi_toml = NamedTempFile::new().unwrap();
+    let file_content = r#"[tool.conda-deny]
+license-whitelist = "tests/default_license_whitelist.toml"
+platform = "linux-64"
+environment = "lint""#;
+
+    temp_pixi_toml
+        .as_file_mut()
+        .write_all(file_content.as_bytes())
+        .unwrap();
+
+    let mut out = out();
+    // Inject the temporary file's path into check_config
+    let temp_path = Some(temp_pixi_toml.path().to_path_buf());
+    let check_config = check_config(
+        temp_path,
+        Some(vec!["tests/default_pixi.lock".into()]),
+        None,
+        None,
+        None,
+        None,
+        None,
+    );
+
     let result = check(check_config, &mut out);
+    let output = String::from_utf8(out).unwrap();
+
+    assert!(output.contains(
+        "There were \u{1b}[32m27\u{1b}[0m safe licenses and \u{1b}[31m21\u{1b}[0m unsafe licenses."
+    ));
+    assert!(result.is_err());
+}
+
+#[test]
+fn test_safe_licenses_in_config_check() {
+    // Create a temporary file for pixi.toml
+    let mut temp_pixi_toml = NamedTempFile::new().unwrap();
+    let file_content = r#"[tool.conda-deny]
+license-whitelist = "tests/default_license_whitelist.toml"
+safe-licenses = ["BSD-3-Clause"]"#;
+
+    temp_pixi_toml
+        .as_file_mut()
+        .write_all(file_content.as_bytes())
+        .unwrap();
+
+    let mut out = out();
+    // Inject the temporary file's path into check_config
+    let temp_path = Some(temp_pixi_toml.path().to_path_buf());
+    let check_config = check_config(
+        temp_path,
+        Some(vec!["tests/default_pixi.lock".into()]),
+        None,
+        None,
+        None,
+        None,
+        None,
+    );
+
+    let result = check(check_config, &mut out);
+    let output = String::from_utf8(out).unwrap();
+
+    println!("{}", output);
+
+    assert!(output.contains(
+        "There were \u{1b}[32m344\u{1b}[0m safe licenses and \u{1b}[31m198\u{1b}[0m unsafe licenses."
+    ));
     assert!(result.is_err());
 }
 
 #[rstest]
 fn test_osi_check(
     #[with(
+        // CONFIG PATH
         None,
-        Some(vec!["tests/test_end_to_end/test_osi_check/pixi.toml".into()]),
+        // LOCKFILE PATHS
+        Some(vec!["tests/default_pixi.lock".into()]),
+        // PREFIXES
         None,
+        // PLATFORM
         None,
+        // ENVIRONMENT
         None,
+        // OSI FLAG
         Some(true)
     )]
     check_config: CondaDenyCheckConfig,
@@ -141,13 +275,23 @@ fn test_osi_check(
 ) {
     let result = check(check_config, &mut out);
 
+    let output = String::from_utf8(out).unwrap();
+
+    assert!(output.contains(
+        "There were \u{1b}[32m458\u{1b}[0m safe licenses and \u{1b}[31m84\u{1b}[0m unsafe licenses."
+    ));
     assert!(result.is_err());
 }
 
 #[rstest]
 fn test_prefix_list(
     #[with(
-        Some(PathBuf::from("tests/test_end_to_end/test_prefix_list/pixi.toml")), None, Some(vec!["tests/test_conda_prefixes/test-env".into()])
+        // CONFIG PATH
+        None,
+        // LOCKFILE PATHS
+        None,
+        // PREFIXES
+        Some(vec!["tests/test_conda_prefixes/test-env".into()])
 )]
     list_config: CondaDenyListConfig,
     mut out: Vec<u8>,
@@ -162,31 +306,86 @@ fn test_prefix_list(
         line_count, expected_line_count,
         "Unexpected number of output lines"
     );
+}
 
-    println!("Output has {} lines", line_count);
+#[rstest]
+fn test_exception_check(
+    #[with(Some(PathBuf::from(
+        // CONFIG PATH
+        "tests/test_exception_use_case/config_with_exception.toml")),
+        // LOCKFILE PATHS
+        Some(vec!["tests/default_pixi.lock".into()])
+    )]
+    check_config: CondaDenyCheckConfig,
+    mut out: Vec<u8>,
+) {
+    let result = check(check_config, &mut out);
+
+    let output = String::from_utf8(out).unwrap();
+
+    assert!(output.contains(
+        "There were \u{1b}[32m528\u{1b}[0m safe licenses and \u{1b}[31m14\u{1b}[0m unsafe licenses."
+    ));
+    assert!(result.is_err());
 }
 
-#[test]
-fn test_exception_check() {
-    let cli = CondaDenyCliConfig::Check {
-        lockfile: None,
-        prefix: None,
-        platform: None,
-        environment: None,
-        osi: None,
-        ignore_pypi: None,
-    };
+#[rstest]
+fn test_pypi_ignore_check(
+    #[with(
+        // CONFIG PATH
+        Some(PathBuf::from("tests/test_pypi_ignore/pixi.toml")),
+        // LOCKFILE PATHS
+        Some(vec!["tests/test_pypi_ignore/lockfile_with_pypi_packages.lock".into()]),
+        // PREFIXES
+        None,
+        // PLATFORM
+        None,
+        // ENVIRONMENT
+        None,
+        // OSI FLAG
+        None,
+        // IGNORE PYPI
+        Some(true)
+    )]
+    check_config: CondaDenyCheckConfig,
+    mut out: Vec<u8>,
+) {
+    let result = check(check_config, &mut out);
 
-    let config = get_config_options(
-        Some("tests/test_end_to_end/test_exception_use_case/pixi.toml".into()),
-        cli,
-    );
+    let output = String::from_utf8(out).unwrap();
 
-    assert!(config.is_err());
-    let err_string = config.unwrap_err().to_string();
-    assert!(
-        err_string.contains("No lockfiles or conda prefixes provided"),
-        "{}",
-        err_string
-    );
+    assert!(output.contains(
+        "There were \u{1b}[32m5\u{1b}[0m safe licenses and \u{1b}[31m17\u{1b}[0m unsafe licenses."
+    ));
+    assert!(result.is_err());
+}
+
+#[rstest]
+fn test_pypi_ignore_error(
+    #[with(
+        // CONFIG PATH
+        Some(PathBuf::from("tests/test_pypi_ignore/pixi.toml")),
+        // LOCKFILE PATHS
+        Some(vec!["tests/test_pypi_ignore/lockfile_with_pypi_packages.lock".into()]),
+        // PREFIXES
+        None,
+        // PLATFORM
+        None,
+        // ENVIRONMENT
+        None,
+        // OSI FLAG
+        None,
+        // IGNORE PYPI
+        Some(false)
+    )]
+    check_config: CondaDenyCheckConfig,
+    mut out: Vec<u8>,
+) {
+    let result = check(check_config, &mut out);
+    if let Err(e) = &result {
+        println!("Actual error: {}", e);
+    }
+    assert!(result.is_err());
+    assert!(format!("{:?}", result).contains("Pypi packages are not supported: beautifulsoup4"));
+    assert_eq!(out, b"");
 }
diff --git a/tests/test_conda_lock_files/distinct_archs.yml b/tests/test_conda_lock_files/distinct_archs.yml
deleted file mode 100644
index 97dbe9b..0000000
--- a/tests/test_conda_lock_files/distinct_archs.yml
+++ /dev/null
@@ -1,10 +0,0 @@
-# NOTE: This file is autogenerated by conda-env-lock.
-# conda-env-lock input hash: 5a1a548f0b268975022d2e1bacec8405a
-name: testfile
-channels:
-- conda-forge
-- nodefaults
-dependencies:
-- conda-forge/linux-64::_libgcc_mutex=0.1=conda_forge
-- conda-forge/linux-64::_openmp_mutex=4.5=2_gnu
-- conda-forge/noarch::alabaster=0.7.16=pyhd8ed1ab_0
\ No newline at end of file
diff --git a/tests/test_conda_lock_files/distinct_archs_empty.yml b/tests/test_conda_lock_files/distinct_archs_empty.yml
deleted file mode 100644
index 006eccc..0000000
--- a/tests/test_conda_lock_files/distinct_archs_empty.yml
+++ /dev/null
@@ -1,7 +0,0 @@
-# NOTE: This file is autogenerated by conda-env-lock.
-# conda-env-lock input hash: 5a1a548f0b268975022d2e1bacec8405a
-name: testfile
-channels:
-- conda-forge
-- nodefaults
-dependencies:
\ No newline at end of file
diff --git a/tests/test_conda_lock_files/invalid_lock.yml b/tests/test_conda_lock_files/invalid_lock.yml
deleted file mode 100644
index b94f6b2..0000000
--- a/tests/test_conda_lock_files/invalid_lock.yml
+++ /dev/null
@@ -1,6 +0,0 @@
-aa;lsdkfja
-sdf
-aa;lsdkfjasd
-fadfh;laksjdhf
-asdfljhalsd;jkf
-asdlkjfhalsdjfhlka
\ No newline at end of file
diff --git a/tests/test_conda_lock_files/valid_lock.yml b/tests/test_conda_lock_files/valid_lock.yml
deleted file mode 100644
index 42d8941..0000000
--- a/tests/test_conda_lock_files/valid_lock.yml
+++ /dev/null
@@ -1,6 +0,0 @@
-name: valid_lock
-channels:
-- conda-forge
-- nodefaults
-dependencies:
-- conda-forge/linux-64::package_name=1.0.0=conda_forge
\ No newline at end of file
diff --git a/tests/test_config_setups/test_empty_config/pixi.toml b/tests/test_config_setups/test_empty_config/pixi.toml
deleted file mode 100644
index e69de29..0000000
diff --git a/tests/test_config_setups/test_empty_config/pyproject.toml b/tests/test_config_setups/test_empty_config/pyproject.toml
deleted file mode 100644
index e69de29..0000000
diff --git a/tests/test_config_setups/test_empty_config_with_header/pixi.toml b/tests/test_config_setups/test_empty_config_with_header/pixi.toml
deleted file mode 100644
index e69de29..0000000
diff --git a/tests/test_config_setups/test_empty_config_with_header/pyproject.toml b/tests/test_config_setups/test_empty_config_with_header/pyproject.toml
deleted file mode 100644
index b8ae624..0000000
--- a/tests/test_config_setups/test_empty_config_with_header/pyproject.toml
+++ /dev/null
@@ -1 +0,0 @@
-[tool.conda-deny]
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_default_use_case/license_whitelist.toml b/tests/test_default_use_case/license_whitelist.toml
similarity index 100%
rename from tests/test_end_to_end/test_default_use_case/license_whitelist.toml
rename to tests/test_default_use_case/license_whitelist.toml
diff --git a/tests/test_config_setups/test_empty_config_with_header/pixi.lock b/tests/test_default_use_case/pixi.lock
similarity index 100%
rename from tests/test_config_setups/test_empty_config_with_header/pixi.lock
rename to tests/test_default_use_case/pixi.lock
diff --git a/tests/test_end_to_end/test_default_use_case/pixi.toml b/tests/test_default_use_case/pixi.toml
similarity index 100%
rename from tests/test_end_to_end/test_default_use_case/pixi.toml
rename to tests/test_default_use_case/pixi.toml
diff --git a/tests/test_end_to_end/test_default_use_case_pyproject/license_whitelist.toml b/tests/test_default_use_case_pyproject/license_whitelist.toml
similarity index 100%
rename from tests/test_end_to_end/test_default_use_case_pyproject/license_whitelist.toml
rename to tests/test_default_use_case_pyproject/license_whitelist.toml
diff --git a/tests/test_end_to_end/test_default_use_case/pixi.lock b/tests/test_default_use_case_pyproject/pixi.lock
similarity index 100%
rename from tests/test_end_to_end/test_default_use_case/pixi.lock
rename to tests/test_default_use_case_pyproject/pixi.lock
diff --git a/tests/test_end_to_end/test_default_use_case_pyproject/pyproject.toml b/tests/test_default_use_case_pyproject/pyproject.toml
similarity index 100%
rename from tests/test_end_to_end/test_default_use_case_pyproject/pyproject.toml
rename to tests/test_default_use_case_pyproject/pyproject.toml
diff --git a/tests/test_end_to_end/test_default_use_case_pyproject/pixi.lock b/tests/test_end_to_end/test_default_use_case_pyproject/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_default_use_case_pyproject/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
-version: 5
-environments:
-  default:
-    channels:
-    - url: https://conda.anaconda.org/conda-forge/
-    packages:
-      linux-64:
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2
-      - conda: https://conda.anaconda.org/conda-forge/noarch/archspec-0.2.3-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/binutils-2.40-h4852527_7.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.40-ha1999f0_7.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/binutils_linux-64-2.40-hb3c18ed_9.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/boltons-24.0.0-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/brotli-python-1.1.0-py312h30efb56_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hd590300_5.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.28.1-hd590300_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/c-compiler-1.7.0-hd590300_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.6.2-hbcca054_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/certifi-2024.6.2-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/cffi-1.16.0-py312hf06ca03_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/cfgv-3.3.1-pyhd8ed1ab_0.tar.bz2
-      - conda: https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.3.2-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/compilers-1.7.0-ha770c72_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/conda-24.5.0-py312h7900ff3_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/conda-libmamba-solver-24.1.0-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/conda-package-handling-2.3.0-pyh7900ff3_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/conda-package-streaming-0.10.0-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/cxx-compiler-1.7.0-h00ab1b0_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/distlib-0.3.8-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/distro-1.9.0-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/filelock-3.15.4-pyhd8ed1ab_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/fmt-10.2.1-h00ab1b0_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/fortran-compiler-1.7.0-heb67821_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/frozendict-2.4.4-py312h9a8786e_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/gcc-12.3.0-h915e2ae_13.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/gcc_impl_linux-64-12.3.0-h58ffeeb_13.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/gcc_linux-64-12.3.0-h9528a6a_9.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/gfortran-12.3.0-h915e2ae_13.conda
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_exception_use_case/pixi.lock b/tests/test_end_to_end/test_exception_use_case/pixi.lock
deleted file mode 100644
index fcf741e..0000000
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diff --git a/tests/test_end_to_end/test_exception_use_case/whitelist_with_exception.toml b/tests/test_end_to_end/test_exception_use_case/whitelist_with_exception.toml
deleted file mode 100644
index 63b65f0..0000000
--- a/tests/test_end_to_end/test_exception_use_case/whitelist_with_exception.toml
+++ /dev/null
@@ -1,26 +0,0 @@
-[tool.conda-deny]
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-    "bzip2-1.0.6",
-    "MIT",
-    "ISC ",
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-    "BSD-3-Clause",
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-    "LicenseRef-Ubuntu-Font-Licence-Version-1.0",
-    "Apache-2.0",
-    "curl",
-    "Apache-2.0 WITH LLVM-exception",
-    "BSD-2-Clause",
-    "LGPL-2.1-or-later",
-    "IJG",
-    "Zlib",
-    "zlib-acknowledgement",
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-    "HPND",
-    "MPL-2.0",
-    "X11"
-]
-
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diff --git a/tests/test_end_to_end/test_exception_use_case/whitelist_without_exception.toml b/tests/test_end_to_end/test_exception_use_case/whitelist_without_exception.toml
deleted file mode 100644
index faf4acf..0000000
--- a/tests/test_end_to_end/test_exception_use_case/whitelist_without_exception.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-safe-licenses = ["GPL-2.0-only"]
diff --git a/tests/test_end_to_end/test_multiple_whitelists/pixi.lock b/tests/test_end_to_end/test_multiple_whitelists/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_multiple_whitelists/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_multiple_whitelists/pixi.toml b/tests/test_end_to_end/test_multiple_whitelists/pixi.toml
deleted file mode 100644
index c0e6382..0000000
--- a/tests/test_end_to_end/test_multiple_whitelists/pixi.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]	
-license-whitelist = ["tests/test_end_to_end/test_multiple_whitelists/license_whitelist.toml", "https://raw.githubusercontent.com/PaulKMueller/conda-deny-test/main/conda-deny-license_whitelist.toml"]	
diff --git a/tests/test_end_to_end/test_osi_check/pixi.lock b/tests/test_end_to_end/test_osi_check/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_osi_check/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_osi_check/pixi.toml b/tests/test_end_to_end/test_osi_check/pixi.toml
deleted file mode 100644
index e69de29..0000000
diff --git a/tests/test_end_to_end/test_pixi_check_restrictions/license_whitelist.toml b/tests/test_end_to_end/test_pixi_check_restrictions/license_whitelist.toml
deleted file mode 100644
index 78026c7..0000000
--- a/tests/test_end_to_end/test_pixi_check_restrictions/license_whitelist.toml
+++ /dev/null
@@ -1,10 +0,0 @@
-[tool.conda-deny]
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-    "Apache-2.0",
-    "Unlicense",
-    "WTFPL",
-    "MIT",
-]
-ignore-packages = [
-    {package="_libgcc_mutex"}
-]
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_pixi_check_restrictions/pixi.lock b/tests/test_end_to_end/test_pixi_check_restrictions/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_pixi_check_restrictions/pixi.lock
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_pixi_check_restrictions/pixi.toml b/tests/test_end_to_end/test_pixi_check_restrictions/pixi.toml
deleted file mode 100644
index aa2b361..0000000
--- a/tests/test_end_to_end/test_pixi_check_restrictions/pixi.toml
+++ /dev/null
@@ -1,4 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "license_whitelist.toml"
-platform = "linux-64"
-environment = "lint"
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_platform_env_spec/license_whitelist.toml b/tests/test_end_to_end/test_platform_env_spec/license_whitelist.toml
deleted file mode 100644
index 78026c7..0000000
--- a/tests/test_end_to_end/test_platform_env_spec/license_whitelist.toml
+++ /dev/null
@@ -1,10 +0,0 @@
-[tool.conda-deny]
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-]
-ignore-packages = [
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-]
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_platform_env_spec/pixi.lock b/tests/test_end_to_end/test_platform_env_spec/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_platform_env_spec/pixi.lock
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_platform_env_spec/pixi.toml b/tests/test_end_to_end/test_platform_env_spec/pixi.toml
deleted file mode 100644
index c629dea..0000000
--- a/tests/test_end_to_end/test_platform_env_spec/pixi.toml
+++ /dev/null
@@ -1,4 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "tests/test_end_to_end/test_platform_env_spec/license_whitelist.toml"
-platform = "linux-64"
-environment = "lint"
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_prefix_list/pixi.lock b/tests/test_end_to_end/test_prefix_list/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_prefix_list/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_prefix_list/pixi.toml b/tests/test_end_to_end/test_prefix_list/pixi.toml
deleted file mode 100644
index aa1ed00..0000000
--- a/tests/test_end_to_end/test_prefix_list/pixi.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "license_whitelist.toml"
diff --git a/tests/test_end_to_end/test_pypi_packages/license_whitelist.toml b/tests/test_end_to_end/test_pypi_packages/license_whitelist.toml
deleted file mode 100644
index 78026c7..0000000
--- a/tests/test_end_to_end/test_pypi_packages/license_whitelist.toml
+++ /dev/null
@@ -1,10 +0,0 @@
-[tool.conda-deny]
-safe-licenses = [
-    "Apache-2.0",
-    "Unlicense",
-    "WTFPL",
-    "MIT",
-]
-ignore-packages = [
-    {package="_libgcc_mutex"}
-]
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_remote_whitelist/pixi.lock b/tests/test_end_to_end/test_remote_whitelist/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_remote_whitelist/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_remote_whitelist/pixi.toml b/tests/test_end_to_end/test_remote_whitelist/pixi.toml
deleted file mode 100644
index 11469ef..0000000
--- a/tests/test_end_to_end/test_remote_whitelist/pixi.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://raw.githubusercontent.com/PaulKMueller/conda-deny-test/main/conda-deny-license_whitelist.toml"
diff --git a/tests/test_end_to_end/test_safe_licenses_in_config/license_whitelist.toml b/tests/test_end_to_end/test_safe_licenses_in_config/license_whitelist.toml
deleted file mode 100644
index 9bad673..0000000
--- a/tests/test_end_to_end/test_safe_licenses_in_config/license_whitelist.toml
+++ /dev/null
@@ -1,9 +0,0 @@
-[tool.conda-deny]
-safe-licenses = [
-    "Apache-2.0",
-    "Unlicense",
-    "WTFPL",
-]
-ignore-packages = [
-    {package="_libgcc_mutex"}
-]
\ No newline at end of file
diff --git a/tests/test_end_to_end/test_safe_licenses_in_config/pixi.lock b/tests/test_end_to_end/test_safe_licenses_in_config/pixi.lock
deleted file mode 100644
index 1c10eff..0000000
--- a/tests/test_end_to_end/test_safe_licenses_in_config/pixi.lock
+++ /dev/null
@@ -1,7437 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_safe_licenses_in_config/pixi.toml b/tests/test_end_to_end/test_safe_licenses_in_config/pixi.toml
deleted file mode 100644
index 8967827..0000000
--- a/tests/test_end_to_end/test_safe_licenses_in_config/pixi.toml
+++ /dev/null
@@ -1,3 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "license_whitelist.toml"
-safe-licenses = ["MIT"]
diff --git a/tests/test_end_to_end/test_exception_use_case/pixi.toml b/tests/test_exception_use_case/config_with_exception.toml
similarity index 68%
rename from tests/test_end_to_end/test_exception_use_case/pixi.toml
rename to tests/test_exception_use_case/config_with_exception.toml
index e1192d6..369a1e2 100644
--- a/tests/test_end_to_end/test_exception_use_case/pixi.toml
+++ b/tests/test_exception_use_case/config_with_exception.toml
@@ -12,4 +12,4 @@ version = "0.1.0"
 poppler = ">=24.8.0,<25"
 
 [tool.conda-deny]
-license-whitelist = "/Users/pkm/Projects/conda-deny/tests/test_end_to_end/test_exception_use_case/whitelist_with_exception.toml"
+license-whitelist = "tests/test_exception_use_case/whitelist_with_exception.toml"
diff --git a/tests/test_exception_use_case/whitelist_with_exception.toml b/tests/test_exception_use_case/whitelist_with_exception.toml
new file mode 100644
index 0000000..aff5905
--- /dev/null
+++ b/tests/test_exception_use_case/whitelist_with_exception.toml
@@ -0,0 +1,54 @@
+[tool.conda-deny]
+safe-licenses = [
+    "MPL-2.0",
+    "BSD-2-Clause",
+    "BSD-3-Clause",
+    "Unlicense",
+    "curl",
+    "X11",
+    "Zlib",
+    "LGPL-2.0-or-later",
+    "LGPL-2.1-only",
+    "LGPL-2.1-or-later",
+    "LGPL-3.0-only",
+    "OFL-1.1",
+    "ISC",
+    # This license is whitelisted with its exception version only.
+    # Packages licensed Apache-2.0 should not pass the license check.
+    "Apache-2.0 WITH LLVM-exception",
+    "MIT",
+    "zlib-acknowledgement",
+    "HPND",
+    "IJG",
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diff --git a/tests/test_pixi_lock_files/invalid_pixi.lock b/tests/test_pixi_lock_files/invalid_pixi.lock
deleted file mode 100644
index 86e2cf0..0000000
--- a/tests/test_pixi_lock_files/invalid_pixi.lock
+++ /dev/null
@@ -1,5 +0,0 @@
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\ No newline at end of file
diff --git a/tests/test_pixi_lock_files/old_pixi.lock b/tests/test_pixi_lock_files/old_pixi.lock
deleted file mode 100644
index 82bca37..0000000
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diff --git a/tests/test_pixi_lock_files/valid2_pixi.lock b/tests/test_pixi_lock_files/valid2_pixi.lock
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-- kind: conda
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\ No newline at end of file
diff --git a/tests/test_end_to_end/test_multiple_whitelists/license_whitelist.toml b/tests/test_pypi_ignore/license_whitelist.toml
similarity index 100%
rename from tests/test_end_to_end/test_multiple_whitelists/license_whitelist.toml
rename to tests/test_pypi_ignore/license_whitelist.toml
diff --git a/tests/test_end_to_end/test_pypi_packages/pixi.lock b/tests/test_pypi_ignore/lockfile_with_pypi_packages.lock
similarity index 100%
rename from tests/test_end_to_end/test_pypi_packages/pixi.lock
rename to tests/test_pypi_ignore/lockfile_with_pypi_packages.lock
diff --git a/tests/test_end_to_end/test_pypi_packages/pixi.toml b/tests/test_pypi_ignore/pixi.toml
similarity index 78%
rename from tests/test_end_to_end/test_pypi_packages/pixi.toml
rename to tests/test_pypi_ignore/pixi.toml
index f0301a0..5ad2079 100644
--- a/tests/test_end_to_end/test_pypi_packages/pixi.toml
+++ b/tests/test_pypi_ignore/pixi.toml
@@ -10,4 +10,4 @@
 	conda-forge-metadata = ">=0.11.0,<0.12"
 	
 	[tool.conda-deny]
-	license-whitelist = "license_whitelist.toml"
+	license-whitelist = "tests/default_license_whitelist.toml"
diff --git a/tests/test_pyproject_toml_files/empty_license_whitelist.toml b/tests/test_pyproject_toml_files/empty_license_whitelist.toml
deleted file mode 100644
index b1a5779..0000000
--- a/tests/test_pyproject_toml_files/empty_license_whitelist.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "tests/test_remote_base_configs/empty_config.toml"
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/env_names.toml b/tests/test_pyproject_toml_files/env_names.toml
deleted file mode 100644
index 9b69e4c..0000000
--- a/tests/test_pyproject_toml_files/env_names.toml
+++ /dev/null
@@ -1,3 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://example.org/conda-deny/base_config.toml"
-conda-environment_name = ["testenv1", "testenv2", "testenv3"]
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/invalid.toml b/tests/test_pyproject_toml_files/invalid.toml
deleted file mode 100644
index 86a8516..0000000
--- a/tests/test_pyproject_toml_files/invalid.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = 123
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/invalid_url.toml b/tests/test_pyproject_toml_files/invalid_url.toml
deleted file mode 100644
index 1c352d4..0000000
--- a/tests/test_pyproject_toml_files/invalid_url.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "This is not a URL."
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/missing_optional_fields.toml b/tests/test_pyproject_toml_files/missing_optional_fields.toml
deleted file mode 100644
index 2e2145f..0000000
--- a/tests/test_pyproject_toml_files/missing_optional_fields.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://example.org/conda-deny/base_config.toml"
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/missing_required_field.toml b/tests/test_pyproject_toml_files/missing_required_field.toml
deleted file mode 100644
index b8ae624..0000000
--- a/tests/test_pyproject_toml_files/missing_required_field.toml
+++ /dev/null
@@ -1 +0,0 @@
-[tool.conda-deny]
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/no_environments.toml b/tests/test_pyproject_toml_files/no_environments.toml
deleted file mode 100644
index 2e2145f..0000000
--- a/tests/test_pyproject_toml_files/no_environments.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://example.org/conda-deny/base_config.toml"
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/test_config_for_license_infos.toml b/tests/test_pyproject_toml_files/test_config_for_license_infos.toml
deleted file mode 100644
index 82c61e4..0000000
--- a/tests/test_pyproject_toml_files/test_config_for_license_infos.toml
+++ /dev/null
@@ -1,4 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://example.org/conda-deny/base_config.toml"
-environment = "default"
-lockfile = "tests/test_pixi_lock_files/valid1_pixi.lock"
diff --git a/tests/test_pyproject_toml_files/valid_config_multiple_urls.toml b/tests/test_pyproject_toml_files/valid_config_multiple_urls.toml
deleted file mode 100644
index 43cae0f..0000000
--- a/tests/test_pyproject_toml_files/valid_config_multiple_urls.toml
+++ /dev/null
@@ -1,3 +0,0 @@
-[tool.conda-deny]
-license-whitelist = ["https://example.org/conda-deny/base_config1.toml", "https://example.org/conda-deny/base_config2.toml"]
-conda-environment-name = ["conda_env1", "conda_env2"]
\ No newline at end of file
diff --git a/tests/test_pyproject_toml_files/valid_config_single_url.toml b/tests/test_pyproject_toml_files/valid_config_single_url.toml
deleted file mode 100644
index 2e2145f..0000000
--- a/tests/test_pyproject_toml_files/valid_config_single_url.toml
+++ /dev/null
@@ -1,2 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "https://example.org/conda-deny/base_config.toml"
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/conda-deny-license_whitelist.toml b/tests/test_remote_base_configs/conda-deny-license_whitelist.toml
deleted file mode 100644
index e0fa009..0000000
--- a/tests/test_remote_base_configs/conda-deny-license_whitelist.toml
+++ /dev/null
@@ -1,10 +0,0 @@
-[tool.conda-deny]
-safe-licenses = [
-    "MIT",
-    "Unlicense",
-    "WTFPL",
-    "Apache-2.0"
-]
-ignore-packages = [
-    {package="_libgcc_mutex"},
-]
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/empty_config.toml b/tests/test_remote_base_configs/empty_config.toml
deleted file mode 100644
index b8ae624..0000000
--- a/tests/test_remote_base_configs/empty_config.toml
+++ /dev/null
@@ -1 +0,0 @@
-[tool.conda-deny]
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/invalid_config.toml b/tests/test_remote_base_configs/invalid_config.toml
deleted file mode 100644
index 9f29000..0000000
--- a/tests/test_remote_base_configs/invalid_config.toml
+++ /dev/null
@@ -1,9 +0,0 @@
-[tool.conda-deny]
-safe-licenses = 
-    # Licenses by their SPDX identifier, see https://spdx.org/licenses/
-    "MIT",
-    "PSF-2.0",
-]
-ignore-packages = 
-    {package="make",
-]
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/valid_config.toml b/tests/test_remote_base_configs/valid_config.toml
deleted file mode 100644
index 596f305..0000000
--- a/tests/test_remote_base_configs/valid_config.toml
+++ /dev/null
@@ -1,10 +0,0 @@
-[tool.conda-deny]
-license-whitelist = "tests/test_remote_base_configs/valid_license_config.toml"
-safe-licenses = [
-    # Licenses by their SPDX identifier, see https://spdx.org/licenses/
-    "MIT",
-    "PSF-2.0",
-]
-ignore-packages = [
-    {package="make"},
-]
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/valid_license_config.toml b/tests/test_remote_base_configs/valid_license_config.toml
deleted file mode 100644
index 87f2c29..0000000
--- a/tests/test_remote_base_configs/valid_license_config.toml
+++ /dev/null
@@ -1,9 +0,0 @@
-[tool.conda-deny]
-safe-licenses = [
-    "Apache-2.0",
-    "Unlicense",
-    "WTFPL",
-]
-ignore-packages = [
-    {package="_libgcc_mutex", version="=4.2.1"},
-]
\ No newline at end of file
diff --git a/tests/test_remote_base_configs/version_test_config.toml b/tests/test_remote_base_configs/version_test_config.toml
deleted file mode 100644
index 34d6fcd..0000000
--- a/tests/test_remote_base_configs/version_test_config.toml
+++ /dev/null
@@ -1,11 +0,0 @@
-[tool.conda-deny]
-safe-licenses = [
-    # Licenses by their SPDX identifier, see https://spdx.org/licenses/
-    "MIT",
-    "PSF-2.0",
-]
-ignore-packages = [
-    {package="package1", version="=4.2.1"},
-    {package="package2", version="<=4.2.1"},
-    {package="package3", version=">4.2.1"},
-]
\ No newline at end of file