Update dependencies and exclusions

Remove dependency exclusions for ANTLR4 now that we use Java 11+.

Add sitemesh to the dependency exclusions since it requires Java 17+.

Author: arteymix

gemma-rest/pom.xml

@@ -165,8 +165,4 @@
         </dependency>
     </dependencies>
 
-    <properties>
-        <antlr4.version>4.13.1</antlr4.version>
-    </properties>
-
 </project>

pom.xml

@@ -439,7 +439,7 @@
 		<dependency>
 			<groupId>com.h2database</groupId>
 			<artifactId>h2</artifactId>
-			<version>2.3.230</version>
+			<version>2.3.232</version>
 			<scope>test</scope>
 		</dependency>
 
@@ -571,7 +571,6 @@
 			<plugin>
 				<groupId>org.codehaus.mojo</groupId>
 				<artifactId>versions-maven-plugin</artifactId>
-				<!-- a newer version with better filters can be enabled with -Pdepcheck, but it's incompatible with the Maven minimum requirement -->
 				<version>2.17.1</version>
 				<configuration>
 					<allowMajorUpdates>false</allowMajorUpdates>
@@ -588,12 +587,9 @@
 						<dependencyExclude>org.springframework.ws:spring-ws-core:*</dependencyExclude>
 						<dependencyExclude>org.glassfish.jersey.*:*:*</dependencyExclude>
 						<dependencyExclude>javax.ws.rs:javax.ws.rs-api:*</dependencyExclude>
-						<dependencyExclude>org.antlr:antlr4-runtime:*</dependencyExclude>
 						<dependencyExclude>com.jayway.jsonpath:json-path:*</dependencyExclude>
+						<dependencyExclude>opensymphony:sitemesh:*</dependencyExclude>
 					</dependencyExcludes>
-					<pluginDependencyExcludes>
-						<pluginDependencyExclude>org.antlr:antlr4-maven-plugin:*</pluginDependencyExclude>
-					</pluginDependencyExcludes>
 				</configuration>
 			</plugin>
 		</plugins>
@@ -751,11 +747,12 @@
 		<jawr.version>3.9</jawr.version>
 		<lucene.version>3.6.2</lucene.version>
 		<slack.version>1.40.3</slack.version>
-		<micrometer.version>1.13.2</micrometer.version>
+		<micrometer.version>1.13.3</micrometer.version>
 		<dom4j.version>2.1.4</dom4j.version>
 		<mysql.version>8.4.0</mysql.version>
-		<tomcat.version>9.0.91</tomcat.version>
+		<tomcat.version>9.0.93</tomcat.version>
 		<mockito.version>5.12.0</mockito.version>
+		<antlr4.version>4.13.2</antlr4.version>
 		<!-- 5.0.7.Final is broken due to https://github.com/ocpsoft/prettytime/issues/276 -->
 		<prettytime.version>5.0.6.Final</prettytime.version>
 		<!-- this ensures that -DexcludedGroups works properly -->