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Generated with OhdsiShinyModules v3.1.1 and ShinyAppBuilder v3.1.0
Location of issue: Characterization module --> Cohort Incidence tab
When using the buttons to download csv results files in the Cohort Incidence tab, the "Download (Full)" and "Download (Filtered)" buttons select the same set of target cohorts. The only difference between the two is which table columns are included in the output. Perhaps I'm remembering the old behavior of the "Download (Full)" button incorrectly, but regardless of what the old behavior was, there needs to be some way to export all of the Cohort Incidence results to a csv file. Currently, the only two ways of doing that are to 1) individually select each target cohort and export the csv file for each and manually merge them, or 2) write custom R-code to query the results schema directly. My Strategus run included over 27 target cohorts so #1 was not an option for me. Thus, I chose to do #2 for my project but I could have saved a lot of time if the full set of incidence rate results for all target cohorts run in Strategus could be output to a single CSV file with only one button push.
To be clear, this problem is also present for Characterization (FeatureExtraction) results. As far as I know the only way to pull results for all target cohorts without individually clicking them is to query the results model directly.
Please let me know if I can do anything else to clarify my issue. If I'm misunderstanding the interface and there is a way to pull all of the CohortIncidence results for all target cohorts at once, please let me know.
Thanks for your continued commitment to improving the shiny viewer!
The text was updated successfully, but these errors were encountered:
App #1 that demonstrates behavior: https://rconnect.jnj.com/epi1228_strategus_db_v2/ (accessible to J&J-internal users only)
App #2 that demonstrates the behavior: https://rconnect.jnj.com/asv003/ (accessible to J&J-internal users only)
Location of issue: Characterization module --> Cohort Incidence tab
When using the buttons to download csv results files in the Cohort Incidence tab, the "Download (Full)" and "Download (Filtered)" buttons select the same set of target cohorts. The only difference between the two is which table columns are included in the output. Perhaps I'm remembering the old behavior of the "Download (Full)" button incorrectly, but regardless of what the old behavior was, there needs to be some way to export all of the Cohort Incidence results to a csv file. Currently, the only two ways of doing that are to 1) individually select each target cohort and export the csv file for each and manually merge them, or 2) write custom R-code to query the results schema directly. My Strategus run included over 27 target cohorts so #1 was not an option for me. Thus, I chose to do #2 for my project but I could have saved a lot of time if the full set of incidence rate results for all target cohorts run in Strategus could be output to a single CSV file with only one button push.
To be clear, this problem is also present for Characterization (FeatureExtraction) results. As far as I know the only way to pull results for all target cohorts without individually clicking them is to query the results model directly.
Please let me know if I can do anything else to clarify my issue. If I'm misunderstanding the interface and there is a way to pull all of the CohortIncidence results for all target cohorts at once, please let me know.
Thanks for your continued commitment to improving the shiny viewer!
The text was updated successfully, but these errors were encountered: