Makefile.model

IMAGES = \
  doc/images/tflow-4ch-stack-validation.png \
  doc/images/tflow-minimal-4ch-validation.png \
  doc/images/tflow-minimal-validation.png  \
  doc/images/xgboost-minimal-validation.png
DATA = \
  doc/data/tflow-minimal-validation.txt \
  doc/data/tflow-minimal-4ch-validation.txt \
  generated/xgboost-minimal-predictions.txt

all: data/dicoms.col generated/submission.csv $(IMAGES)

# Does not remove `data/dicoms.col`, since this takes very long to generate,
# and we don't expect it to change.
clean:
	@rm -f $(IMAGES)
	@rm -f $(DATA)

data/dicoms.col:
	@rm -f $@
	find data/train/ data/validate/ -name \*.dcm -print0 | sort -z | PYTHONPATH=generated/python:python/.libs xargs -0 scripts/load-dicom.py --output-path=$@

doc/data/xgboost-minimal-validation.txt: programs/xgboost/xgboost-minimal.py data/dicoms.col
	PYTHONPATH=generated/python:python/.libs programs/xgboost/xgboost-minimal.py --validation-output=doc/data/xgboost-minimal-validation.txt --prediction-output=generated/xgboost-minimal-predictions.txt

generated/xgboost-minimal-predictions.txt: doc/data/xgboost-minimal-validation.txt
	@if test -f $@; then :; else \
	  rm -f doc/data/xgboost-minimal-validation.txt; \
	  $(MAKE) -f Makefile.model doc/data/xgboost-minimal-validation.txt; \
	fi

doc/data/tflow-minimal-validation.txt: programs/tensorflow/tflow-minimal.py data/dicoms.col
	PYTHONPATH=generated/python:python/.libs programs/tensorflow/tflow-minimal.py --validation-output=$@

doc/data/tflow-minimal-4ch-validation.txt: programs/tensorflow/tflow-minimal.py data/dicoms.col
	PYTHONPATH=generated/python:python/.libs programs/tensorflow/tflow-minimal.py --validation-output=$@ --view=4ch

doc/data/tflow-4ch-stack-validation.txt: programs/tensorflow/tflow-4ch-stack.py data/dicoms.col
	PYTHONPATH=generated/python:python/.libs programs/tensorflow/tflow-4ch-stack.py --validation-output=$@

doc/images/%-validation.png: doc/data/%-validation.txt scripts/plot-validation-data.gnuplot
	gnuplot -e "input_path='$<'; output_path='$@'" scripts/plot-validation-data.gnuplot

generated/submission.csv: generated/xgboost-minimal-predictions.txt
	programs/create-submission.py generated/xgboost-minimal-predictions.txt > $@