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DESCRIPTION
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Package: BRSpred
Title: BCG Response Subtype Predictor for High-Risk Non-Muscle Invasive Bladder Cancer
Version: 1.2.1
Date: 2024-08-13
Authors@R: c(
person("Teemu D.", "Laajala", email = "teelaa@utu.fi", role = c("aut", "cre")),
person("Florus C.", "de Jong", email = "f.c.dejong@erasmusmc.nl", role = c("aut")),
person("James C.", "Costello", email = "james.costello@cuanschutz.edu", role = c("ctb")))
Description: Consensus clustering based molecular predictor for BCG responsiveness in bladder cancer, with subsequent pamr-centroid based clustering pipeline for new samples. Further, transcriptomics data for training and validation are provided.
Depends: R (>= 3.5.0)
Encoding: UTF-8
License: GPL (>= 3) + file LICENSE
LazyData: true
LazyDataCompression: xz
Imports:
pamr,
survminer,
matrixStats,
ConsensusClusterPlus,
preprocessCore
Suggests:
pheatmap,
RColorBrewer,
tibble,
roxygen2,
knitr,
rmarkdown,
survival,
ggplot2
RoxygenNote: 7.2.3
VignetteBuilder: knitr