_site.yml

output_dir: '.'
name: "CEID 2019 nCoV"
#navbar:
#  title: "COVID-19 Portal"
#  title: "<img id=\"logo\" style=\"width: 30px;\" src=\"dog.gif\" />"
#  left:
#    #- text: "☗"
#    - icon: fa-home
#      href: index.html
#    - text: "Tracker (Cases, Fatalities, Hospitalizations)"
#      href: tracker.html
#    - text: "Maps"
#      href: maps.html
#    - text: "Nowcast"
#      href: nowcast.html
#    - text: "Speed of Spread"
#      href: speed-of-spread.html
#    - text: "Epidemic Characteristics in Context"
#      menu: 
#        - text: "COVID-19 in Context"
#          href: context.html
#        - text: "Epidemic Characteristics (Global & US)"
#          href: parameters.html
#        - text: "Effective Reproduction Number outside China"
#          href: reff-outside.html
#    - text: "Models & Research"
#      menu:
#        - text: "Stochastic Models"
#        - text: "Stochastic Model for Wuhan (China)"
#          href: stochastic.html
#        - text: "Stochastic Model for Georgia (USA)"
#          href: stochastic-GA.html
#        - text: "Spatial Models"
#        - text: "Spatial Model for China"
#          href: spatial-china.html
#        - text: "Probability of Widespread Transmission"
#          href: final-size.html
#        - text: "Effect of Early Intervention"
#          href: early-intervention.html
#        - text: "Effect of Mass Testing"
#          href: mass_testing.html
#    - text: "Stochastic Model (Wuhan)"
#      href: stochastic.html
#    - text: "Stochastic Model (Georgia)"
#      href: stochastic-GA.html
#    - text: "Probability of Widespread Transmission"
#      href: final-size.html
#    - text: "China Spatial Model"
#      href: spatial-china.html
#    - text: "US Spatial Model"
#      href: spatial-US.html
#    - text: "World Import Risk"
#      href: spatial-world.html
#    - text: "Effect of Early Intervention"
#      href: early-intervention.html
#    - text: "Effect of Mass Testing"
#      href: mass_testing.html
#    - text: "News"
#      href: news.html
#    - text: "Data"
#      href: data.html
#    - text: "About"
#      href: about.html
#  right:
#    - text: "<img id=\"logo\" style=\"width: 30px;\" src=\"dog.gif\" />"
#    - text: "<a href=\"https://ceid.uga.edu/support/\" target=\"_blank\">Support CEID</a>"
#     - text: "Support CEID"
#      href: "https://ceid.uga.edu/support/"
output:
  html_document:
    self_contained: false
    theme: cosmo
    highlight: textmate
    mathjax: null
    toc_depth: 3
    toc_float:
      collapsed: false
    includes:
      in_header: include_head.html
      before_body: include_header.html
      after_body: include_footer_tmpfix.html
    css: css/main.css