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CFA Scenarios Mechanistic Model Documentation

Table of Contents

1. Anticipated Applications
2. High Level Summary
3. Model Structure, Moving Parts, and Customizable Elements
4. Software Design
5. Vaccination
6. Waning
7. Introduction of New Strains and External Populations
8. Modifying Beta
9. Contact Matrices
10. Model Epochs and Strain Combination
11. Inference and MCMC
12. Plotting Capabilities
13. Configuration Scripts and Scenario/Epoch specific Configs
14. Appendix

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Contact Us

For code specific questions reach out to:

Ariel Shurygin (uva5@cdc.gov) or Ben Kok Toh (tjk3@cdc.gov) or Michael Batista(upi8@cdc.gov)

For implementation questions reach out to Tom Hladish (utx5@cdc.gov)