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CFA Scenarios Mechanistic Model Documentation

Table of Contents

1. Anticipated Applications
2. High Level Summary
3. Model Structure, Moving Parts, and Customizable Elements
4. Vaccination
5. Waning
6. Introduction of New Strains and External Populations
7. Modifying Beta
8. Contact Matrices
9. Model Epochs and Strain Combination
10. Inference and MCMC
11. Plotting Capabilities
12. Configuration Scripts and Scenario/Epoch specific Configs
13. Appendix

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Contact Us

For code specific questions reach out to:

Ariel Shurygin (uva5@cdc.gov) or Ben Kok Toh (tjk3@cdc.gov) or Michael Batista(upi8@cdc.gov)

For implementation questions reach out to Tom Hladish (utx5@cdc.gov)